miRTarBase - #MIRT442277


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pre-miRNA Information
pre-miRNA hsa-mir-3133   
Genomic Coordinates chr2: 241477905 - 241477982
Description Homo sapiens miR-3133 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3133
Sequence 10| UAAAGAACUCUUAAAACCCAAU |31
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1030052469 1 dbSNP
rs955010137 12 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TLX3   
Synonyms HOX11L2, RNX
Description T-cell leukemia homeobox 3
Transcript NM_021025   
Expression
Putative miRNA Targets on TLX3
3'UTR of TLX3
(miRNA target sites are highlighted)		 
>TLX3|NM_021025|3'UTR
   1 GCCCACCAGCGCGCACCGTCGCCACGGATCGCCGCCCCCACCCAGCCGGGCGCCCCGGACCCCCCAGGCGGGCTGCGGGG
  81 GAACCGGCGCCGAGAGGGGAAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCCGCGGAAG
 161 GGGGTAGGGCCCGAGCTCCGCGCGGCCGCACAATCCGAGCCCCCGCCCCGCGCCCCGTCCCGCCCCAGGCCCGGGCCTGA
 241 CAAGAAAGCGCCTTACGTTTCTCCGCCCCCCGCCCGCACCCCCCGGGCCGGGCGCCTGTATTATACTTTGTACTTTTGCC
 321 CAAACGTGTAAATAATAAAAAAGTTTTGGCTTTTTTCTTTAGAAACCGGCCACCTGCTTCCCCCGCGGGGGCCGCTGGAG
 401 GAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCCGGGGCACCCTGCGTTTAGGCTGGGTCCACTCTTCTTC
 481 TTTTCCGTTCCTTTTATTTAAGTCTTTTTATTTAATAAAAAAGTTAGCTATTTCAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uaACCCAAAAUUCUCAAGAAAu 5'
            ||| ||||     |||||| 
Target 5' ttTGGCTTTT-----TTCTTTa 3'
 345 - 361 130.00 -5.90
2 
miRNA  3' uaacccaaaauucucAAGAAAu 5'
                         |||||| 
Target 5' ctgggtccactcttcTTCTTTt 3'
 463 - 484 120.00 -7.73
3 
miRNA  3' uaacccaaaauuCUCAAGaaau 5'
                      | |||:    
Target 5' ccggggcaccctGCGTTTaggc 3'
 442 - 463 66.00 -8.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30131772 13 COSMIC
COSN31830436 21 COSMIC
COSN30751732 35 COSMIC
COSN30530586 52 COSMIC
COSN14629138 53 COSMIC
COSN30534736 163 COSMIC
COSN9420017 250 COSMIC
COSN28642357 269 COSMIC
COSN31603041 374 COSMIC
COSN17038158 417 COSMIC
rs918472 234 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs747002973 3 dbSNP
rs768416875 7 dbSNP
rs754854636 9 dbSNP
rs776450685 10 dbSNP
rs763119453 11 dbSNP
rs1298315556 12 dbSNP
rs1021521764 14 dbSNP
rs1327979980 16 dbSNP
rs774423751 18 dbSNP
rs1268579906 19 dbSNP
rs1339008036 20 dbSNP
rs1201068152 22 dbSNP
rs1419695997 23 dbSNP
rs557034183 24 dbSNP
rs759532907 25 dbSNP
rs1203571545 26 dbSNP
rs1249260900 31 dbSNP
rs767693930 34 dbSNP
rs1191498025 36 dbSNP
rs1372090632 37 dbSNP
rs1470607606 38 dbSNP
rs1478136001 39 dbSNP
rs1178207943 40 dbSNP
rs1426579986 41 dbSNP
rs753234893 42 dbSNP
rs903648714 43 dbSNP
rs1425313904 48 dbSNP
rs761309156 53 dbSNP
rs1215801858 60 dbSNP
rs1376982739 60 dbSNP
rs576901747 61 dbSNP
rs960875127 62 dbSNP
rs1205225379 63 dbSNP
rs1355156355 69 dbSNP
rs766946862 70 dbSNP
rs1328261536 71 dbSNP
rs1246592356 78 dbSNP
rs1013518201 82 dbSNP
rs1294298580 86 dbSNP
rs1226387562 87 dbSNP
rs1022651161 88 dbSNP
rs969690328 91 dbSNP
rs1401328409 93 dbSNP
rs1390172107 94 dbSNP
rs1329500360 97 dbSNP
rs545958310 99 dbSNP
rs969230657 100 dbSNP
rs942267394 103 dbSNP
rs1192682759 104 dbSNP
rs1476770177 108 dbSNP
rs1265281867 109 dbSNP
rs1193858517 113 dbSNP
rs1235243320 115 dbSNP
rs1450511956 116 dbSNP
rs972297014 117 dbSNP
rs559418120 120 dbSNP
rs1017021912 122 dbSNP
rs1335094642 125 dbSNP
rs1274150644 126 dbSNP
rs572825290 127 dbSNP
rs1218442853 131 dbSNP
rs1184131880 135 dbSNP
rs962826402 136 dbSNP
rs1330590923 138 dbSNP
rs1258778381 140 dbSNP
rs1321674192 147 dbSNP
rs972688049 149 dbSNP
rs1395521392 154 dbSNP
rs1472540012 157 dbSNP
rs542013126 158 dbSNP
rs1477661278 159 dbSNP
rs1414651649 161 dbSNP
rs933426683 162 dbSNP
rs774976746 163 dbSNP
rs1357523237 164 dbSNP
rs987054156 165 dbSNP
rs959305557 166 dbSNP
rs1043033043 167 dbSNP
rs911494223 169 dbSNP
rs1273101685 170 dbSNP
rs942866019 173 dbSNP
rs1407905528 175 dbSNP
rs1444914546 175 dbSNP
rs1355997066 178 dbSNP
rs1329315179 180 dbSNP
rs1413792811 181 dbSNP
rs1290053571 183 dbSNP
rs1031511306 184 dbSNP
rs1043913247 185 dbSNP
rs1014024287 193 dbSNP
rs1218288904 195 dbSNP
rs903574966 197 dbSNP
rs935090886 200 dbSNP
rs1205686234 208 dbSNP
rs1442308959 210 dbSNP
rs1052502015 211 dbSNP
rs896171799 216 dbSNP
rs1013692736 217 dbSNP
rs1238174543 220 dbSNP
rs1375830164 228 dbSNP
rs1279884204 231 dbSNP
rs918472 234 dbSNP
rs1314633768 251 dbSNP
rs1435340826 265 dbSNP
rs1016607787 266 dbSNP
rs905143008 270 dbSNP
rs530755767 271 dbSNP
rs972690901 272 dbSNP
rs1180960775 274 dbSNP
rs1180572168 277 dbSNP
rs1255916749 279 dbSNP
rs576230815 279 dbSNP
rs919445569 280 dbSNP
rs1285342231 281 dbSNP
rs1016105107 283 dbSNP
rs550458807 284 dbSNP
rs962751889 285 dbSNP
rs1190863871 289 dbSNP
rs563370852 294 dbSNP
rs1435104442 295 dbSNP
rs972853484 299 dbSNP
rs1307951090 309 dbSNP
rs1026039897 313 dbSNP
rs1228021234 314 dbSNP
rs955391186 317 dbSNP
rs987243233 319 dbSNP
rs1294910279 331 dbSNP
rs752017515 334 dbSNP
rs1339784167 337 dbSNP
rs1370022798 337 dbSNP
rs1295768841 340 dbSNP
rs910671323 344 dbSNP
rs1213123410 356 dbSNP
rs757786939 357 dbSNP
rs763987556 367 dbSNP
rs1309707324 368 dbSNP
rs1416056005 369 dbSNP
rs1190543289 370 dbSNP
rs943454360 374 dbSNP
rs942959148 375 dbSNP
rs1043041331 383 dbSNP
rs979536709 389 dbSNP
rs1261456695 399 dbSNP
rs1272823527 401 dbSNP
rs1369360412 407 dbSNP
rs1219447370 411 dbSNP
rs925468581 412 dbSNP
rs935058353 417 dbSNP
rs1052172334 421 dbSNP
rs1383906697 424 dbSNP
rs1053423040 428 dbSNP
rs1292437275 436 dbSNP
rs1339377598 436 dbSNP
rs1433796315 438 dbSNP
rs1396266242 443 dbSNP
rs1203664171 445 dbSNP
rs1165246280 448 dbSNP
rs1462275155 449 dbSNP
rs895716855 456 dbSNP
rs896252577 457 dbSNP
rs1168952476 460 dbSNP
rs753661933 462 dbSNP
rs1262449444 465 dbSNP
rs949073075 467 dbSNP
rs879609415 473 dbSNP
rs1467276689 474 dbSNP
rs1255084285 475 dbSNP
rs1214601474 476 dbSNP
rs1014123456 478 dbSNP
rs1044241245 481 dbSNP
rs1045167336 486 dbSNP
rs60850132 488 dbSNP
rs1016607648 492 dbSNP
rs1231401488 492 dbSNP
rs1372603284 503 dbSNP
rs1479165254 510 dbSNP
rs1445676179 517 dbSNP
rs1399943314 523 dbSNP
rs1194426454 524 dbSNP
rs1006148924 530 dbSNP
rs1296825995 533 dbSNP
rs1016074031 536 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uaACCCAAAAUUCUCAAGAAAu 5'
            ||| ||||     |||||| 
Target 5' -uUGGCUUUU-----UUCUUUa 3'
 		1 - 16
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000296921.5 | 3UTR | UUGGCUUUUUUCUUUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000296921.5 | 3UTR | UUGGCUUUUUUCUUUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
174 hsa-miR-3133 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057804 SLC30A7 solute carrier family 30 member 7 2 2
MIRT075401 ZFHX3 zinc finger homeobox 3 2 2
MIRT088350 MAPRE3 microtubule associated protein RP/EB family member 3 2 6
MIRT107288 FAM73B mitoguardin 2 2 2
MIRT141571 ABHD2 abhydrolase domain containing 2 2 2
MIRT161036 CDV3 CDV3 homolog 2 2
MIRT167732 RNF146 ring finger protein 146 8 3
MIRT209559 PAK2 p21 (RAC1) activated kinase 2 2 2
MIRT214631 SMAD5 SMAD family member 5 2 8
MIRT258393 KIAA0895 KIAA0895 2 2
MIRT272744 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT309347 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 6
MIRT329705 SCD stearoyl-CoA desaturase 2 2
MIRT336556 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT363351 AGO2 argonaute 2, RISC catalytic component 2 4
MIRT386753 TAOK1 TAO kinase 1 2 2
MIRT441580 EXOC5 exocyst complex component 5 2 2
MIRT441735 SEPT8 septin 8 2 2
MIRT441817 LRRC40 leucine rich repeat containing 40 2 2
MIRT442180 TRIM59 tripartite motif containing 59 2 4
MIRT442277 TLX3 T-cell leukemia homeobox 3 2 2
MIRT442489 TBC1D19 TBC1 domain family member 19 2 2
MIRT443242 ANKRD26 ankyrin repeat domain 26 2 2
MIRT443270 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT444114 CEPT1 choline/ethanolamine phosphotransferase 1 2 2
MIRT444725 LAMA2 laminin subunit alpha 2 2 2
MIRT445346 FAM169A family with sequence similarity 169 member A 2 2
MIRT445693 GJB1 gap junction protein beta 1 2 2
MIRT446051 CDC73 cell division cycle 73 2 2
MIRT447746 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT447955 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT449199 ZNF623 zinc finger protein 623 2 2
MIRT449564 GPC5 glypican 5 2 2
MIRT450938 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT459811 POTED POTE ankyrin domain family member D 2 8
MIRT461692 ZNF426 zinc finger protein 426 2 2
MIRT462014 SNRNP27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 2 2
MIRT465150 TSC22D2 TSC22 domain family member 2 2 2
MIRT467144 SREK1IP1 SREK1 interacting protein 1 2 2
MIRT474929 KCTD15 potassium channel tetramerization domain containing 15 2 8
MIRT475118 IPPK inositol-pentakisphosphate 2-kinase 2 2
MIRT476844 FIGN fidgetin, microtubule severing factor 2 10
MIRT477336 EPHA2 EPH receptor A2 2 2
MIRT477853 DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 2 2
MIRT481113 B2M beta-2-microglobulin 2 2
MIRT481296 ATP6V1B2 ATPase H+ transporting V1 subunit B2 2 10
MIRT485094 SLC30A1 solute carrier family 30 member 1 2 4
MIRT491908 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 2 2
MIRT492458 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 8
MIRT493341 LAPTM4A lysosomal protein transmembrane 4 alpha 2 12
MIRT494771 AP1G1 adaptor related protein complex 1 gamma 1 subunit 2 2
MIRT497837 GPR26 G protein-coupled receptor 26 2 2
MIRT497958 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT498445 INO80D INO80 complex subunit D 2 2
MIRT498997 HAT1 histone acetyltransferase 1 2 10
MIRT499257 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT500067 SFT2D2 SFT2 domain containing 2 2 4
MIRT501385 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT503084 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503272 SLC7A5 solute carrier family 7 member 5 2 2
MIRT504341 ASGR2 asialoglycoprotein receptor 2 2 2
MIRT505453 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 6
MIRT505905 RIMS3 regulating synaptic membrane exocytosis 3 2 6
MIRT507917 C7orf60 base methyltransferase of 25S rRNA 2 homolog 2 6
MIRT508174 FRK fyn related Src family tyrosine kinase 2 4
MIRT508287 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 4
MIRT509232 KIF14 kinesin family member 14 2 6
MIRT509481 GNL3L G protein nucleolar 3 like 2 6
MIRT509530 INTU inturned planar cell polarity protein 2 6
MIRT509548 BTLA B and T lymphocyte associated 2 8
MIRT511328 KIAA1522 KIAA1522 2 4
MIRT511427 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 4
MIRT511477 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 4
MIRT512471 CCDC149 coiled-coil domain containing 149 2 2
MIRT512996 SEZ6L seizure related 6 homolog like 2 2
MIRT514755 ACER3 alkaline ceramidase 3 2 8
MIRT515764 KRTAP5-6 keratin associated protein 5-6 2 2
MIRT517392 TBK1 TANK binding kinase 1 2 4
MIRT518720 FTH1 ferritin heavy chain 1 2 2
MIRT521923 PHIP pleckstrin homology domain interacting protein 2 4
MIRT522849 KIAA2022 neurite extension and migration factor 2 4
MIRT522887 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT523153 HNRNPU heterogeneous nuclear ribonucleoprotein U 2 2
MIRT525149 ZNF256 zinc finger protein 256 2 2
MIRT525941 C11orf74 chromosome 11 open reading frame 74 2 2
MIRT526876 ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 2 2
MIRT527366 KRTAP13-2 keratin associated protein 13-2 2 2
MIRT527549 DLGAP5 DLG associated protein 5 2 4
MIRT527604 ANKRD42 ankyrin repeat domain 42 2 2
MIRT527803 KLRD1 killer cell lectin like receptor D1 2 2
MIRT528046 PRKD3 protein kinase D3 2 2
MIRT528397 PGK1 phosphoglycerate kinase 1 2 2
MIRT529673 SLC28A1 solute carrier family 28 member 1 2 2
MIRT530358 HPSE heparanase 2 2
MIRT530908 KIAA1161 myogenesis regulating glycosidase (putative) 2 2
MIRT531169 ZNF333 zinc finger protein 333 2 2
MIRT531438 PAK1 p21 (RAC1) activated kinase 1 2 2
MIRT531562 CENPC1P1 centromere protein C pseudogene 1 1 1
MIRT532783 LDHD lactate dehydrogenase D 2 2
MIRT532848 ZNF699 zinc finger protein 699 2 2
MIRT534287 SLC12A7 solute carrier family 12 member 7 2 2
MIRT535078 PPIG peptidylprolyl isomerase G 2 4
MIRT535968 MFAP3L microfibril associated protein 3 like 2 2
MIRT536163 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT537417 FBXO47 F-box protein 47 2 2
MIRT538665 CCSAP centriole, cilia and spindle associated protein 2 2
MIRT540291 RGR retinal G protein coupled receptor 2 4
MIRT543332 KIAA1456 KIAA1456 2 2
MIRT543392 CC2D2A coiled-coil and C2 domain containing 2A 2 2
MIRT543891 AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 2 2
MIRT545609 SIGLEC9 sialic acid binding Ig like lectin 9 2 2
MIRT545839 ZNF275 zinc finger protein 275 2 2
MIRT546689 RORA RAR related orphan receptor A 2 4
MIRT547513 MAT2A methionine adenosyltransferase 2A 2 4
MIRT549431 ACVR1 activin A receptor type 1 2 2
MIRT550567 MYC MYC proto-oncogene, bHLH transcription factor 2 4
MIRT552517 ZIC5 Zic family member 5 2 2
MIRT552743 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT552942 VKORC1L1 vitamin K epoxide reductase complex subunit 1 like 1 2 2
MIRT555752 PDCD10 programmed cell death 10 2 2
MIRT558002 FAM160B1 family with sequence similarity 160 member B1 2 2
MIRT559422 ASF1B anti-silencing function 1B histone chaperone 2 2
MIRT560276 SF1 splicing factor 1 2 2
MIRT560713 ZNF324B zinc finger protein 324B 2 2
MIRT561190 TNFRSF10A TNF receptor superfamily member 10a 2 2
MIRT561817 NUP50 nucleoporin 50 2 2
MIRT562018 LCLAT1 lysocardiolipin acyltransferase 1 2 2
MIRT562847 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT563252 SETD6 SET domain containing 6 2 2
MIRT563978 GCC2 GRIP and coiled-coil domain containing 2 2 2
MIRT564383 BAAT bile acid-CoA:amino acid N-acyltransferase 2 2
MIRT566552 PANK3 pantothenate kinase 3 2 2
MIRT566933 LIN28B lin-28 homolog B 2 2
MIRT566989 LBR lamin B receptor 2 2
MIRT567645 EXT1 exostosin glycosyltransferase 1 2 2
MIRT568268 BICD2 BICD cargo adaptor 2 2 2
MIRT571407 MED4 mediator complex subunit 4 2 2
MIRT571784 PPP2CA protein phosphatase 2 catalytic subunit alpha 2 2
MIRT572437 ATM ATM serine/threonine kinase 2 2
MIRT573613 COX6A1P2 cytochrome c oxidase subunit 6A1 pseudogene 2 2 2
MIRT574289 COX6A1 cytochrome c oxidase subunit 6A1 2 2
MIRT574375 YY1 YY1 transcription factor 2 2
MIRT613142 DSEL dermatan sulfate epimerase-like 2 2
MIRT616661 ORAI1 ORAI calcium release-activated calcium modulator 1 2 2
MIRT619345 SASH1 SAM and SH3 domain containing 1 2 2
MIRT626315 ABCC9 ATP binding cassette subfamily C member 9 2 2
MIRT628235 FAM117B family with sequence similarity 117 member B 2 2
MIRT630452 GTPBP8 GTP binding protein 8 (putative) 2 2
MIRT631013 TMEM30B transmembrane protein 30B 2 2
MIRT637315 FBXO18 F-box protein, helicase, 18 2 2
MIRT640658 FRY FRY microtubule binding protein 2 2
MIRT642081 FUT11 fucosyltransferase 11 2 2
MIRT644607 C17orf77 chromosome 17 open reading frame 77 2 2
MIRT644829 DNAJC21 DnaJ heat shock protein family (Hsp40) member C21 2 2
MIRT652465 TMEM2 transmembrane protein 2 2 2
MIRT657514 HAS2 hyaluronan synthase 2 2 2
MIRT658290 FAM86C1 family with sequence similarity 86 member C1 2 2
MIRT659570 CGGBP1 CGG triplet repeat binding protein 1 2 2
MIRT675457 SRP19 signal recognition particle 19 2 2
MIRT687828 ITGB8 integrin subunit beta 8 2 2
MIRT693550 MYO16 myosin XVI 2 2
MIRT697294 ZNF654 zinc finger protein 654 2 2
MIRT699804 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT704867 CD164 CD164 molecule 2 2
MIRT705309 AVL9 AVL9 cell migration associated 2 2
MIRT705323 ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 2 2
MIRT707180 HOXC4 homeobox C4 2 2
MIRT709331 CLEC12B C-type lectin domain family 12 member B 2 2
MIRT712321 PER2 period circadian clock 2 2 2
MIRT713817 XRCC2 X-ray repair cross complementing 2 2 2
MIRT713854 HHLA2 HERV-H LTR-associating 2 2 2
MIRT717257 SLC44A1 solute carrier family 44 member 1 2 2
MIRT719956 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT725408 KIF6 kinesin family member 6 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3133 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3133 Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-mir-3133 Androstenedione+Anastrozole sensitive cell line (MCF-7)
hsa-mir-3133 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3133 Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-3133 Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-3133 Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3133 Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-3133 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3133 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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