miRTarBase - #MIRT442334


—
pre-miRNA Information
pre-miRNA hsa-mir-5189   
Genomic Coordinates chr16: 88468918 - 88469031
Description Homo sapiens miR-5189 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-5189-3p
Sequence 67| UGCCAACCGUCAGAGCCCAGA |87
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN6648174 16 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1231393102 3 dbSNP
rs755177359 8 dbSNP
rs80296158 9 dbSNP
rs1359410244 13 dbSNP
rs35613341 16 dbSNP
Putative Targets

Gene Information
Gene Symbol WNT9B   
Synonyms WNT14B, WNT15
Description Wnt family member 9B
Transcript NM_003396   
Expression
Putative miRNA Targets on WNT9B
3'UTR of WNT9B
(miRNA target sites are highlighted)		 
>WNT9B|NM_003396|3'UTR
   1 GCCTACTGCCCAGCAAGCCAGTCTGGCACTGCCAGGACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGGCCCTCTGGGC
  81 AGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
 161 GCCTTTTGCCTCCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAACCTTGTTGAGGA
 241 CTTGGAGAGGAGGGCAGAGTGAGAAAGACATGGAGGGAAATAAGGGAGACCAAGAGCACAGCAGGACTGAAATTTTGGAC
 321 GGGAGAGAGGGGCTATTCCATCTTGCTTCCTGGGATGAATGGCTTGGAGCCAGCATGTTCTTGGGAGGTGAACTGCTGGG
 401 CTAGGAATGCCAAGGCAGGCAGTGCCAGCTGGAAGTGAAGGCGGGAGCCTGGCTGAGATGGGTCAATCGGGTCCTGTGGC
 481 CCTGCTCAGGTGCAGTGGGCTCCAGGTGTCACACACCTCCACCACTCCCCTGGTTTTGCTGTGCCAGAGATGGGGAGAAA
 561 GCACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTGGACCCGAGTGAGATCTGTGCCCTG
 641 GAGCCCTGTGTCCTTGATTTGGCTTTTCAAATATGCCTCCGCTGAGGCCTCATTCTTGTCTCGAGAGCTGGGTTATGCAC
 721 ACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTG
 801 CACCTGAGGTTGAACAGGGAGACAACGGCCCCTCCCTGTGTTCCCTGCTGGCCAAAGGAATCTTCACTCCCAGCGCAGAG
 881 GAGGAGGGCAACAGCTTCCTGGTGCCTGGCAGTGACGTGGCGAGCTCAGTTTCTCAGCTGGCTCTTGAGTGAGCTTTGGT
 961 GACTTCCTGTGGCTGGGGCCTGCCTGGTCTGTGACACCCCCATACCAGCTGAGTTCACAATACTGAAGAACAGCTGGCTC
1041 ACGAGCTATGACTTGAAGTTACATTTCTATTCTTGTGGCTGCTCATCTAGTTAAGGCTTTTGCCCTGGCTGGGGTTATAG
1121 GTGCTTGAGTCCTTGCTAAGCCTGGCTCCTGGGTAGCCTCCTTCAGTTCCTAATGGCCTCTCACTTGGCCCTCACTTTGG
1201 CTCTTACTTGAGGAGGAGACGTGACTTTGATAATTTCCTCAGATCCTGTGGACATTTTCAGCAGCACCTGCCAAGGCCCT
1281 CTGTGAAAGGAGGAGAGACTGGTACCTCCACACAGGCACACATGGATGCACAGCCCCTGGACCAGGCTGGGGGTTCCTGT
1361 TGCACATGCCTCTCTTGTTCAGGATGAAGACCTTGCAGGGGTCCCCTTGCTGGAGGCATTGTACTTCCCCAGAGTGGGGC
1441 CCGATGCCACCCAGGAGGAAGTGACTTCTTTCGGGAAGCCCTTGGCCACTTTGCTGGCCCTGCCACGCCCATCTGTCAGC
1521 TTCCTTTCTCCCTAAACCTAGAGTTGCTGACCCTTCACCAACACAGGAAATTTCAGAATCAGCTGAATGCTCAGAAACCT
1601 CGCCTGTGCCAGCTCCAGGACAAAGGCCCGCTGACTGTGCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGC
1681 TGCCCAGTCTCCAGTGGATCAGGGCAGTCTGCTGGATGCTGGAAGGATTTTTGACTGCAGAGGCCCGGCTGAGAAGCCAA
1761 ACTGACCTGAGCCCCTCTCGTTAAAATGACATTGCTGACCCAAGCACCTGGCCCACACCTTGGCAGCAGGAGAAAAATGG
1841 GGAGAGGGCTGGTTTTCTCCTTTCTTCCACTTCCCCACAGCATGGAGATTTTCTCTGCCTTCCCAATCCATCTTGCTCCT
1921 CCGAGACCCCAACTCTGCCTCCACCCAGGCTCAGTGCTGGGCGTAAGGCAGCAGGGACCTCACTGGCAGAGCAGGGGGCC
2001 TGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGG
2081 GTCGTGGGAGGGCAAAGGGCAGGCTCTAAGGCATCTAGGCAGTGGCTGGCTGCTAACATGGACACCCCAAGTCAATGGCA
2161 CAGTGCAGGTTCTGAGGGCTCCTTGGCTTGTGGGGTCTTCTCTGTCTGTCTCTCTCCCTCTCTTCTTCCTTGCTCTCATC
2241 CCTTTCTTTTCCAGTTACCCCTGAAGACCCACCTCGGCCCTCTTGGGGCCCCTGGGGACTAGAGTGACCACTGACCCCTC
2321 ATTCTACAGCTTTAAGGGAAATGCTCACAGGGTATTTTTGTCTACCTCAAATATATAGTTTTTAGAGCAAAGGAGAATAA
2401 TTTATATAGCTAAGATATATGAGAAAGTATTTATATTATTTATATAGTTGCTATATTTCACAGACAGCACAGGTGGGGTT
2481 TGTGTATTTTCCCGGAAACCCTCTGTCTGGGGAGATACAGCCTGACCTGACCGGGTCCCCCACTGAGCAGGAGGCCGGGT
2561 CGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCTGGTAAGCACATGTCCGCTCTGTGATGAG
2641 CCCTGGTGGGCTCCATCCAGACCCTCCTTGTGATGTTTTTGTAGATTTTCTGCCCTTCTGGGTCCAGGCCCCCTTCTTCT
2721 GCTCTGGCAAAAGTGTCTTACTCATAATGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTAT
2801 TTAGAAACAAAAACTTTTACCCCTTTCATCTCACTTGATTTCTCCGTTATCTCTGTGAGGTAGGTGGGGCCACATTACTG
2881 TGGCCATTTTATAGATGAGGTCCAGAGATGGAGAGCTGTGCTCAAAGTCACACCTAAGAGACTTGTTCAATGAATATTTA
2961 CTGAACATCTCCATAGACCAGGCACTACGGGCTGACCTGCTCTGAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAG
3041 CCCAAGAACTCAGGGAAGCAGTTCCTTCCCAGGCTGTGATCCCAGCCTTTTGGATCTGGATGGCATGTTGGCACTTCCCC
3121 CAAGTGGAGTCCCATGTCTCAGGGGCTTTGGCTGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAG
3201 GGGTCCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAACCTACAGATGAATTTTGATTGC
3281 TCTCATTTGTGTTTTGCTTGTAAAAATGAATTGTTTTCCACTGGATTTCTGGCTGCTTTTGCAAAAGTCAGCTGCGCTGG
3361 CAGACTGGGCCTGCATGTCCTCCTGCAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGATGCCCCAAGTGCCCCCGTTG
3441 CTCATGGATGCCCCTGCCTGCCTCTCATGAGCACATAGTCCTGTCCCCTGGTCTAGATAAGCCCAGCTTTCCTGGTACCC
3521 TTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGACATTACTTGCTTTTGAACCTTTCCTTTCTCAACAACCAT
3601 GAACTTCAAATGCTTTCTGTCTCAGGACACTTTAGAATAACAATGGAAGCCATCACTTATTGAGCACCCCTTATGTCCAT
3681 TTATTCAACCAATGATTATTTAGGGATCTCTTATTGAGCACCAGGCAGCATCCTGGGTGCTTGGTGCAGCAAGGAACAGG
3761 ACCAAGTCTCTGCCTCATGGGGCTGACATCCTAGTGGGTGAGAAAGACAATAAACCAATAAATGACATGCCAGTTATTTG
3841 CA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agACCCGAGACUG-----CCAACCGu 5'
            ||  :||||||     || |||| 
Target 5' ccTGCATTCTGACTTCATGGCTGGCa 3'
 2047 - 2072 127.00 -18.70
2 
miRNA  3' agacCCG-AGA-CUG---CCAACCGu 5'
              ||| ||| |:|   || |||| 
Target 5' ctaaGGCATCTAGGCAGTGGCTGGCt 3'
 2106 - 2131 121.00 -14.20
3 
miRNA  3' agACCCGAG----ACUG-CCAACCGu 5'
            | || ||    ||:|  |||||| 
Target 5' ttTTGGATCTGGATGGCATGTTGGCa 3'
 3088 - 3113 121.00 -18.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30100415 35 COSMIC
COSN31489064 42 COSMIC
COSN30143934 62 COSMIC
COSN30507650 66 COSMIC
COSN20078954 94 COSMIC
COSN22074619 96 COSMIC
COSN18741244 110 COSMIC
COSN26341823 113 COSMIC
COSN29325655 137 COSMIC
COSN30128692 149 COSMIC
COSN30512755 215 COSMIC
COSN21736277 1277 COSMIC
COSN18837685 1549 COSMIC
COSN20986975 1671 COSMIC
COSN26828969 2291 COSMIC
COSN8837530 2407 COSMIC
COSN21537545 2718 COSMIC
COSN29257318 3054 COSMIC
COSN5417029 3062 COSMIC
COSN15798958 3601 COSMIC
COSN8394020 3615 COSMIC
COSN16150872 3627 COSMIC
COSN5179243 3807 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs142346113 2 dbSNP
rs1482068871 11 dbSNP
rs964246432 12 dbSNP
rs755285243 15 dbSNP
rs1263210908 19 dbSNP
rs1478449510 30 dbSNP
rs140945765 32 dbSNP
rs1323448867 33 dbSNP
rs548768993 34 dbSNP
rs1170141445 43 dbSNP
rs1435336520 44 dbSNP
rs1280761541 45 dbSNP
rs539318058 48 dbSNP
rs373971292 49 dbSNP
rs776961985 51 dbSNP
rs747006152 52 dbSNP
rs1373023076 56 dbSNP
rs1200535298 63 dbSNP
rs1481641490 64 dbSNP
rs1270634634 66 dbSNP
rs1196773339 68 dbSNP
rs912315713 69 dbSNP
rs759907521 70 dbSNP
rs1037196402 74 dbSNP
rs553351443 75 dbSNP
rs1337430968 89 dbSNP
rs1186131606 98 dbSNP
rs1037809317 99 dbSNP
rs1325362172 103 dbSNP
rs906011545 109 dbSNP
rs1435947246 110 dbSNP
rs757014104 114 dbSNP
rs1336575904 123 dbSNP
rs1459712866 125 dbSNP
rs1389721454 126 dbSNP
rs1287648686 130 dbSNP
rs1177732590 140 dbSNP
rs551426872 150 dbSNP
rs931591252 151 dbSNP
rs1449723607 153 dbSNP
rs1233082195 159 dbSNP
rs1183413915 162 dbSNP
rs1002135560 163 dbSNP
rs1049111218 176 dbSNP
rs1056872914 177 dbSNP
rs895593552 178 dbSNP
rs1422586652 183 dbSNP
rs1261097555 187 dbSNP
rs1218415373 191 dbSNP
rs895369337 194 dbSNP
rs1334553625 197 dbSNP
rs114446554 201 dbSNP
rs1432723785 216 dbSNP
rs1376188799 218 dbSNP
rs1000095636 220 dbSNP
rs1454984324 223 dbSNP
rs1336547652 224 dbSNP
rs372677876 224 dbSNP
rs1401624230 226 dbSNP
rs1024934080 229 dbSNP
rs1159892460 234 dbSNP
rs1229447025 236 dbSNP
rs1274526102 240 dbSNP
rs1384812606 248 dbSNP
rs1379086803 250 dbSNP
rs1183668181 255 dbSNP
rs906622842 258 dbSNP
rs1241175218 259 dbSNP
rs560177145 260 dbSNP
rs1447322500 270 dbSNP
rs1286638139 272 dbSNP
rs1031546894 274 dbSNP
rs954968821 276 dbSNP
rs868096283 278 dbSNP
rs1248242575 282 dbSNP
rs185918306 285 dbSNP
rs190040093 289 dbSNP
rs1431964487 299 dbSNP
rs942058704 304 dbSNP
rs1319888250 305 dbSNP
rs1417554129 314 dbSNP
rs973609988 315 dbSNP
rs1163721113 320 dbSNP
rs762890816 321 dbSNP
rs953948097 322 dbSNP
rs1249382057 336 dbSNP
rs1475626024 337 dbSNP
rs544413008 349 dbSNP
rs1057484248 354 dbSNP
rs985538489 361 dbSNP
rs764205425 365 dbSNP
rs1488118169 373 dbSNP
rs1292746146 378 dbSNP
rs945790954 383 dbSNP
rs1357316472 385 dbSNP
rs1289815567 396 dbSNP
rs1041512169 401 dbSNP
rs912222377 403 dbSNP
rs1192445269 406 dbSNP
rs1364696453 409 dbSNP
rs1244684531 410 dbSNP
rs1268850847 412 dbSNP
rs1399761567 423 dbSNP
rs1339488098 426 dbSNP
rs904177281 429 dbSNP
rs564307429 432 dbSNP
rs943831062 435 dbSNP
rs1347552591 441 dbSNP
rs527400844 443 dbSNP
rs751658882 444 dbSNP
rs1172953708 455 dbSNP
rs1406898161 467 dbSNP
rs143148960 469 dbSNP
rs756066362 470 dbSNP
rs997998041 481 dbSNP
rs766432328 491 dbSNP
rs931489276 498 dbSNP
rs1489882611 501 dbSNP
rs1389244277 515 dbSNP
rs1205297435 526 dbSNP
rs1435968803 529 dbSNP
rs1048529647 539 dbSNP
rs1309836617 548 dbSNP
rs1218444237 554 dbSNP
rs549050183 554 dbSNP
rs948294136 558 dbSNP
rs1283540967 561 dbSNP
rs183303040 564 dbSNP
rs186547148 565 dbSNP
rs1169687293 566 dbSNP
rs1014989653 567 dbSNP
rs1168395001 574 dbSNP
rs1464925118 578 dbSNP
rs999634008 580 dbSNP
rs1429654335 582 dbSNP
rs1031078165 583 dbSNP
rs973413361 584 dbSNP
rs1266918967 585 dbSNP
rs1177894687 592 dbSNP
rs1481636807 600 dbSNP
rs893867343 610 dbSNP
rs927527965 611 dbSNP
rs1011827907 616 dbSNP
rs548352756 623 dbSNP
rs954134750 624 dbSNP
rs985393821 626 dbSNP
rs1222051974 630 dbSNP
rs770043303 632 dbSNP
rs754854057 635 dbSNP
rs1019264199 637 dbSNP
rs964999807 638 dbSNP
rs1300125909 639 dbSNP
rs1223880687 642 dbSNP
rs1374810569 646 dbSNP
rs972341720 654 dbSNP
rs778662348 658 dbSNP
rs561772229 662 dbSNP
rs867070734 680 dbSNP
rs867525852 681 dbSNP
rs747811744 682 dbSNP
rs1377317280 687 dbSNP
rs530578689 703 dbSNP
rs550809255 707 dbSNP
rs570523666 709 dbSNP
rs1378485210 714 dbSNP
rs948345783 721 dbSNP
rs946226246 724 dbSNP
rs16941168 726 dbSNP
rs1199067770 733 dbSNP
rs546562757 734 dbSNP
rs775681675 737 dbSNP
rs1199134325 744 dbSNP
rs1471508758 747 dbSNP
rs146673701 749 dbSNP
rs1255068768 751 dbSNP
rs935332764 761 dbSNP
rs1243401469 765 dbSNP
rs1052396530 769 dbSNP
rs1306533564 774 dbSNP
rs535452066 782 dbSNP
rs904312882 783 dbSNP
rs1317026498 784 dbSNP
rs893889740 785 dbSNP
rs1394095377 789 dbSNP
rs746554295 790 dbSNP
rs555294890 791 dbSNP
rs889607463 793 dbSNP
rs569026975 794 dbSNP
rs1158174587 797 dbSNP
rs1019501875 804 dbSNP
rs965240116 807 dbSNP
rs1185981586 816 dbSNP
rs1423607403 819 dbSNP
rs1262956507 824 dbSNP
rs563097844 827 dbSNP
rs993799319 828 dbSNP
rs1408450035 831 dbSNP
rs777127167 835 dbSNP
rs1025231849 839 dbSNP
rs952605701 849 dbSNP
rs1014956983 851 dbSNP
rs12951527 854 dbSNP
rs1296098823 855 dbSNP
rs114352372 871 dbSNP
rs1281943797 875 dbSNP
rs969571007 876 dbSNP
rs578099167 880 dbSNP
rs1357798954 881 dbSNP
rs1161977238 882 dbSNP
rs1457898093 889 dbSNP
rs1034776419 896 dbSNP
rs982248226 897 dbSNP
rs11871306 901 dbSNP
rs554169291 902 dbSNP
rs775759066 903 dbSNP
rs1490371810 904 dbSNP
rs1268929528 907 dbSNP
rs917543023 910 dbSNP
rs574229296 917 dbSNP
rs1052469730 918 dbSNP
rs1207116576 920 dbSNP
rs56324505 922 dbSNP
rs946813313 923 dbSNP
rs1405703736 927 dbSNP
rs1474846826 927 dbSNP
rs1347611077 936 dbSNP
rs1050518335 937 dbSNP
rs1185280436 942 dbSNP
rs889168562 948 dbSNP
rs1006694689 955 dbSNP
rs1039349631 968 dbSNP
rs1300367242 973 dbSNP
rs774574111 977 dbSNP
rs561632159 979 dbSNP
rs920912258 980 dbSNP
rs1040819884 987 dbSNP
rs933698447 993 dbSNP
rs530643233 994 dbSNP
rs544300596 995 dbSNP
rs994039638 998 dbSNP
rs1456279267 1002 dbSNP
rs1025306007 1003 dbSNP
rs1310257211 1006 dbSNP
rs952395475 1017 dbSNP
rs1003961630 1021 dbSNP
rs1395988049 1025 dbSNP
rs1336366479 1036 dbSNP
rs764281760 1043 dbSNP
rs1023397730 1044 dbSNP
rs1400198274 1046 dbSNP
rs564338468 1047 dbSNP
rs1337857244 1050 dbSNP
rs1471141882 1051 dbSNP
rs1038174415 1054 dbSNP
rs1170392076 1059 dbSNP
rs1477414315 1060 dbSNP
rs1363800931 1070 dbSNP
rs1244956602 1077 dbSNP
rs191096344 1079 dbSNP
rs982284389 1091 dbSNP
rs928108766 1106 dbSNP
rs956980888 1117 dbSNP
rs774431715 1119 dbSNP
rs915255617 1121 dbSNP
rs1275128363 1136 dbSNP
rs1351669314 1146 dbSNP
rs946749269 1147 dbSNP
rs879608246 1153 dbSNP
rs1238026633 1154 dbSNP
rs1024524834 1155 dbSNP
rs148377822 1156 dbSNP
rs1450660352 1160 dbSNP
rs1339010374 1161 dbSNP
rs1198491539 1162 dbSNP
rs1331791529 1166 dbSNP
rs910638130 1167 dbSNP
rs944762076 1172 dbSNP
rs1159977959 1177 dbSNP
rs1040893439 1183 dbSNP
rs1379642790 1185 dbSNP
rs1184069481 1201 dbSNP
rs566655639 1202 dbSNP
rs1258250494 1221 dbSNP
rs901012410 1222 dbSNP
rs1447851995 1229 dbSNP
rs1184296237 1235 dbSNP
rs926130263 1241 dbSNP
rs957586806 1247 dbSNP
rs929920095 1252 dbSNP
rs1230457042 1255 dbSNP
rs1377613720 1263 dbSNP
rs1284032774 1274 dbSNP
rs921053904 1279 dbSNP
rs1389573478 1283 dbSNP
rs933647030 1289 dbSNP
rs1299604266 1290 dbSNP
rs1397609208 1300 dbSNP
rs1447917204 1311 dbSNP
rs116161242 1314 dbSNP
rs1390982451 1317 dbSNP
rs1465894273 1318 dbSNP
rs1411507938 1323 dbSNP
rs1301443736 1324 dbSNP
rs1162472937 1325 dbSNP
rs1475594838 1326 dbSNP
rs1405065182 1335 dbSNP
rs1265640652 1344 dbSNP
rs1191704233 1348 dbSNP
rs908432405 1350 dbSNP
rs888332977 1353 dbSNP
rs1005237651 1357 dbSNP
rs1223845576 1357 dbSNP
rs1397053391 1358 dbSNP
rs1215548466 1364 dbSNP
rs1320385146 1370 dbSNP
rs1279708687 1373 dbSNP
rs1216488608 1383 dbSNP
rs375324043 1400 dbSNP
rs1319316889 1401 dbSNP
rs1339430412 1402 dbSNP
rs1293659625 1410 dbSNP
rs1437951660 1420 dbSNP
rs1348082433 1421 dbSNP
rs1023683593 1425 dbSNP
rs898314734 1437 dbSNP
rs904977455 1441 dbSNP
rs1003291243 1443 dbSNP
rs12450286 1444 dbSNP
rs956844419 1445 dbSNP
rs988278269 1448 dbSNP
rs1311236883 1460 dbSNP
rs1477649808 1463 dbSNP
rs1426102831 1464 dbSNP
rs1193026346 1473 dbSNP
rs1022561931 1474 dbSNP
rs1246656269 1478 dbSNP
rs1205759736 1482 dbSNP
rs1459479577 1498 dbSNP
rs571545811 1499 dbSNP
rs1218387889 1501 dbSNP
rs1316966071 1503 dbSNP
rs986158884 1507 dbSNP
rs766383020 1508 dbSNP
rs1274187777 1511 dbSNP
rs910537608 1512 dbSNP
rs944834040 1516 dbSNP
rs976120813 1521 dbSNP
rs1247523084 1525 dbSNP
rs922469622 1532 dbSNP
rs753853060 1548 dbSNP
rs1047312913 1555 dbSNP
rs1179321960 1558 dbSNP
rs1262760013 1567 dbSNP
rs538530416 1573 dbSNP
rs1432814565 1582 dbSNP
rs1198449231 1590 dbSNP
rs1462006323 1594 dbSNP
rs140549841 1603 dbSNP
rs1033292788 1604 dbSNP
rs957761892 1610 dbSNP
rs1379673381 1611 dbSNP
rs1470601159 1613 dbSNP
rs1277367278 1615 dbSNP
rs975644829 1624 dbSNP
rs1379072924 1626 dbSNP
rs1028450153 1630 dbSNP
rs1159127840 1631 dbSNP
rs1387065986 1641 dbSNP
rs537983359 1644 dbSNP
rs986400413 1647 dbSNP
rs908234751 1652 dbSNP
rs1358780102 1653 dbSNP
rs1320635962 1656 dbSNP
rs1159373128 1661 dbSNP
rs1421550465 1663 dbSNP
rs1379024020 1668 dbSNP
rs369226569 1671 dbSNP
rs1424763501 1675 dbSNP
rs904840248 1685 dbSNP
rs1180462320 1688 dbSNP
rs1482097918 1692 dbSNP
rs1279120970 1695 dbSNP
rs1003322321 1705 dbSNP
rs1355155694 1711 dbSNP
rs1034779505 1717 dbSNP
rs1239426171 1723 dbSNP
rs919883180 1727 dbSNP
rs73316355 1733 dbSNP
rs1331436759 1737 dbSNP
rs1054975787 1744 dbSNP
rs1378762422 1745 dbSNP
rs182945323 1746 dbSNP
rs554303312 1747 dbSNP
rs1158118535 1748 dbSNP
rs1210739651 1749 dbSNP
rs1261316513 1755 dbSNP
rs1045873294 1761 dbSNP
rs1163165539 1762 dbSNP
rs1022849315 1780 dbSNP
rs758051871 1790 dbSNP
rs1193851541 1796 dbSNP
rs893287199 1804 dbSNP
rs1480996932 1806 dbSNP
rs1260491703 1809 dbSNP
rs986787508 1810 dbSNP
rs574264975 1816 dbSNP
rs998888412 1817 dbSNP
rs1267102498 1822 dbSNP
rs1033257247 1823 dbSNP
rs1320827785 1827 dbSNP
rs1017584399 1831 dbSNP
rs761144334 1842 dbSNP
rs1279081590 1845 dbSNP
rs1220762636 1846 dbSNP
rs1181894162 1847 dbSNP
rs1338696566 1848 dbSNP
rs966005747 1851 dbSNP
rs976027774 1853 dbSNP
rs1393550857 1868 dbSNP
rs1459226641 1874 dbSNP
rs1292239694 1876 dbSNP
rs143929927 1879 dbSNP
rs1028503649 1884 dbSNP
rs572079677 1887 dbSNP
rs1420982479 1888 dbSNP
rs536350770 1897 dbSNP
rs1456097634 1905 dbSNP
rs1294963872 1910 dbSNP
rs555426948 1923 dbSNP
rs1390970833 1924 dbSNP
rs138996529 1933 dbSNP
rs1467973696 1934 dbSNP
rs1286219229 1938 dbSNP
rs746461646 1946 dbSNP
rs116860651 1950 dbSNP
rs1183233048 1951 dbSNP
rs1316333826 1954 dbSNP
rs781626789 1962 dbSNP
rs1045372412 1963 dbSNP
rs115908012 1964 dbSNP
rs1299282320 1966 dbSNP
rs937956230 1985 dbSNP
rs1401637583 1986 dbSNP
rs939015728 1993 dbSNP
rs1464359000 1994 dbSNP
rs865840410 1995 dbSNP
rs892226431 1997 dbSNP
rs576450066 2007 dbSNP
rs1490574380 2009 dbSNP
rs746349510 2011 dbSNP
rs188400013 2012 dbSNP
rs1238680541 2022 dbSNP
rs1180310294 2027 dbSNP
rs1456240926 2029 dbSNP
rs1272574131 2034 dbSNP
rs1473872357 2035 dbSNP
rs1347383672 2051 dbSNP
rs1007840996 2066 dbSNP
rs1178243800 2073 dbSNP
rs1254391014 2085 dbSNP
rs903305819 2088 dbSNP
rs1017826668 2089 dbSNP
rs149352406 2100 dbSNP
rs1445048855 2101 dbSNP
rs997475415 2105 dbSNP
rs1335479384 2107 dbSNP
rs1026238810 2111 dbSNP
rs560267387 2116 dbSNP
rs780454111 2125 dbSNP
rs1414736586 2126 dbSNP
rs950868878 2130 dbSNP
rs997126052 2133 dbSNP
rs1433517854 2135 dbSNP
rs1380865835 2139 dbSNP
rs115387434 2144 dbSNP
rs1437594666 2146 dbSNP
rs1232149180 2148 dbSNP
rs548851677 2153 dbSNP
rs1187974347 2167 dbSNP
rs909744169 2170 dbSNP
rs768857188 2192 dbSNP
rs1305967246 2193 dbSNP
rs980605304 2194 dbSNP
rs1210290324 2196 dbSNP
rs1015258027 2197 dbSNP
rs1288792006 2204 dbSNP
rs1238693419 2213 dbSNP
rs562584828 2215 dbSNP
rs1350571330 2217 dbSNP
rs926528536 2219 dbSNP
rs1372122836 2221 dbSNP
rs939213892 2223 dbSNP
rs551693965 2230 dbSNP
rs1442876590 2233 dbSNP
rs1413643679 2236 dbSNP
rs1302232187 2237 dbSNP
rs1159920870 2242 dbSNP
rs774472255 2248 dbSNP
rs1163657475 2262 dbSNP
rs761938752 2272 dbSNP
rs1366954262 2276 dbSNP
rs945172360 2277 dbSNP
rs1026671008 2278 dbSNP
rs1226748035 2283 dbSNP
rs1214509514 2289 dbSNP
rs1043855414 2290 dbSNP
rs959323190 2295 dbSNP
rs144575390 2296 dbSNP
rs772258228 2302 dbSNP
rs903575739 2303 dbSNP
rs917863541 2311 dbSNP
rs1291062647 2317 dbSNP
rs1232371497 2329 dbSNP
rs1008160404 2336 dbSNP
rs1299544080 2347 dbSNP
rs1272979426 2353 dbSNP
rs1039140131 2356 dbSNP
rs977919209 2363 dbSNP
rs551708215 2366 dbSNP
rs1205632325 2372 dbSNP
rs934744392 2374 dbSNP
rs1237465430 2402 dbSNP
rs1482558594 2407 dbSNP
rs1183097187 2414 dbSNP
rs902111696 2421 dbSNP
rs1448521400 2424 dbSNP
rs558864980 2427 dbSNP
rs1475097076 2430 dbSNP
rs1247815732 2434 dbSNP
rs571662389 2436 dbSNP
rs534267250 2440 dbSNP
rs1391597010 2441 dbSNP
rs1273004373 2452 dbSNP
rs1410381628 2454 dbSNP
rs879542574 2455 dbSNP
rs1357365572 2461 dbSNP
rs759538297 2466 dbSNP
rs192837779 2468 dbSNP
rs567835399 2472 dbSNP
rs1274927573 2476 dbSNP
rs148493731 2477 dbSNP
rs980606275 2483 dbSNP
rs1434428955 2494 dbSNP
rs1033503181 2495 dbSNP
rs960650600 2502 dbSNP
rs1409456338 2503 dbSNP
rs1426043254 2505 dbSNP
rs757869736 2522 dbSNP
rs765142152 2527 dbSNP
rs1192977143 2528 dbSNP
rs1453164183 2533 dbSNP
rs556883823 2534 dbSNP
rs183197752 2538 dbSNP
rs537444758 2540 dbSNP
rs913598092 2542 dbSNP
rs1215588825 2543 dbSNP
rs945052131 2555 dbSNP
rs959064203 2557 dbSNP
rs1310968217 2558 dbSNP
rs1220421267 2562 dbSNP
rs979098088 2563 dbSNP
rs1302522388 2569 dbSNP
rs1243252348 2570 dbSNP
rs1464081158 2572 dbSNP
rs1012366822 2582 dbSNP
rs557695136 2583 dbSNP
rs1359932353 2593 dbSNP
rs577679355 2608 dbSNP
rs1039211929 2615 dbSNP
rs1395024396 2616 dbSNP
rs1475499828 2617 dbSNP
rs540301719 2619 dbSNP
rs1159714902 2622 dbSNP
rs1190423490 2628 dbSNP
rs1530365 2629 dbSNP
rs867872276 2646 dbSNP
rs142611468 2665 dbSNP
rs762659550 2668 dbSNP
rs1237652436 2671 dbSNP
rs1211642140 2682 dbSNP
rs1345040245 2683 dbSNP
rs1279527835 2701 dbSNP
rs957879043 2704 dbSNP
rs1304660369 2709 dbSNP
rs990236546 2709 dbSNP
rs1390565903 2713 dbSNP
rs1387795707 2715 dbSNP
rs1380198616 2717 dbSNP
rs914675018 2721 dbSNP
rs187847476 2722 dbSNP
rs1375000826 2726 dbSNP
rs1298872724 2729 dbSNP
rs1006635073 2736 dbSNP
rs1362532634 2742 dbSNP
rs1158874375 2748 dbSNP
rs146010086 2761 dbSNP
rs377194393 2762 dbSNP
rs1189539228 2773 dbSNP
rs1484483239 2774 dbSNP
rs1256259476 2775 dbSNP
rs1274652777 2786 dbSNP
rs905973672 2788 dbSNP
rs751192425 2808 dbSNP
rs1033537884 2814 dbSNP
rs960517421 2819 dbSNP
rs756950505 2821 dbSNP
rs944312584 2822 dbSNP
rs1231755890 2829 dbSNP
rs1355038847 2845 dbSNP
rs1278965391 2846 dbSNP
rs1401876302 2861 dbSNP
rs991965014 2867 dbSNP
rs780677462 2870 dbSNP
rs1264358740 2877 dbSNP
rs1329073178 2881 dbSNP
rs191384733 2890 dbSNP
rs1352048103 2892 dbSNP
rs1163207836 2897 dbSNP
rs1474048372 2900 dbSNP
rs1037269968 2906 dbSNP
rs531464971 2910 dbSNP
rs1193782981 2915 dbSNP
rs897317867 2917 dbSNP
rs781018268 2929 dbSNP
rs1447246180 2931 dbSNP
rs1021311079 2932 dbSNP
rs894893929 2939 dbSNP
rs1379388909 2952 dbSNP
rs143233892 2961 dbSNP
rs1220552608 2963 dbSNP
rs538340054 2969 dbSNP
rs527808174 2970 dbSNP
rs1387918937 2973 dbSNP
rs1370331883 2975 dbSNP
rs1478916985 2976 dbSNP
rs749993933 2980 dbSNP
rs1461208663 2981 dbSNP
rs1393296916 2983 dbSNP
rs1170864599 2989 dbSNP
rs547851930 2990 dbSNP
rs372225661 2992 dbSNP
rs1370902607 2994 dbSNP
rs567898069 2997 dbSNP
rs745842180 3000 dbSNP
rs1433744423 3004 dbSNP
rs1254775527 3014 dbSNP
rs1191535529 3032 dbSNP
rs1467818750 3033 dbSNP
rs1258950104 3035 dbSNP
rs1411234191 3038 dbSNP
rs1471528678 3039 dbSNP
rs1337680849 3049 dbSNP
rs536835199 3060 dbSNP
rs1157047356 3065 dbSNP
rs1234017175 3069 dbSNP
rs550350357 3070 dbSNP
rs1387166206 3071 dbSNP
rs1401532874 3075 dbSNP
rs1350719495 3087 dbSNP
rs974450439 3089 dbSNP
rs922995559 3092 dbSNP
rs906423461 3105 dbSNP
rs1378202775 3107 dbSNP
rs184636696 3121 dbSNP
rs1393840782 3130 dbSNP
rs1166844980 3132 dbSNP
rs999424551 3133 dbSNP
rs1323185383 3142 dbSNP
rs1047845802 3146 dbSNP
rs868063689 3151 dbSNP
rs1171606103 3155 dbSNP
rs1348336534 3164 dbSNP
rs1453717869 3165 dbSNP
rs556356233 3166 dbSNP
rs1284252998 3179 dbSNP
rs886696929 3181 dbSNP
rs1350425221 3186 dbSNP
rs1250034227 3190 dbSNP
rs1227045663 3202 dbSNP
rs756556504 3204 dbSNP
rs1030950912 3206 dbSNP
rs1350816498 3207 dbSNP
rs780430796 3215 dbSNP
rs1208707134 3221 dbSNP
rs1281684831 3222 dbSNP
rs1237289277 3223 dbSNP
rs942288819 3225 dbSNP
rs1333646956 3230 dbSNP
rs1038143673 3242 dbSNP
rs1287373636 3244 dbSNP
rs73316356 3246 dbSNP
rs1001650172 3249 dbSNP
rs1310525011 3251 dbSNP
rs539284021 3252 dbSNP
rs1035791283 3253 dbSNP
rs895881854 3254 dbSNP
rs1013428119 3260 dbSNP
rs1316102464 3263 dbSNP
rs1020753825 3279 dbSNP
rs1363445360 3283 dbSNP
rs967063065 3289 dbSNP
rs1000788163 3290 dbSNP
rs1486770290 3291 dbSNP
rs1184203161 3296 dbSNP
rs985455970 3297 dbSNP
rs189180931 3300 dbSNP
rs1032451754 3312 dbSNP
rs964359506 3319 dbSNP
rs1286901662 3320 dbSNP
rs912546444 3323 dbSNP
rs768927479 3325 dbSNP
rs577551381 3327 dbSNP
rs533692059 3333 dbSNP
rs1426724276 3334 dbSNP
rs1304156860 3353 dbSNP
rs1356948682 3356 dbSNP
rs931461294 3357 dbSNP
rs1345737105 3366 dbSNP
rs1320130469 3367 dbSNP
rs1398877845 3375 dbSNP
rs1384050457 3377 dbSNP
rs954425453 3378 dbSNP
rs1476334298 3383 dbSNP
rs553448297 3394 dbSNP
rs1415908248 3397 dbSNP
rs1331523175 3398 dbSNP
rs984058179 3399 dbSNP
rs76990846 3407 dbSNP
rs947812512 3415 dbSNP
rs1281851299 3423 dbSNP
rs942298272 3426 dbSNP
rs1291097112 3430 dbSNP
rs1246190202 3432 dbSNP
rs1215907051 3437 dbSNP
rs1336533277 3440 dbSNP
rs146697945 3454 dbSNP
rs1271419340 3455 dbSNP
rs1428611872 3461 dbSNP
rs61491051 3465 dbSNP
rs927504347 3466 dbSNP
rs999224980 3467 dbSNP
rs1030919741 3481 dbSNP
rs1462777883 3493 dbSNP
rs937345342 3515 dbSNP
rs1057117552 3520 dbSNP
rs777791859 3533 dbSNP
rs1410737098 3535 dbSNP
rs1421810097 3537 dbSNP
rs1339849432 3540 dbSNP
rs1184829911 3542 dbSNP
rs1475396790 3550 dbSNP
rs1247757612 3554 dbSNP
rs1197309201 3562 dbSNP
rs772487353 3579 dbSNP
rs1251227606 3580 dbSNP
rs1441765497 3595 dbSNP
rs1212746533 3600 dbSNP
rs773410116 3605 dbSNP
rs1010318466 3621 dbSNP
rs1274553417 3624 dbSNP
rs1186951275 3626 dbSNP
rs1235759667 3629 dbSNP
rs953262505 3633 dbSNP
rs1042653687 3634 dbSNP
rs532274293 3638 dbSNP
rs1164495054 3641 dbSNP
rs1389761381 3647 dbSNP
rs902326804 3650 dbSNP
rs192590432 3666 dbSNP
rs1019693020 3668 dbSNP
rs1170007502 3669 dbSNP
rs965348127 3670 dbSNP
rs1168465335 3671 dbSNP
rs1032278207 3672 dbSNP
rs972713031 3675 dbSNP
rs867632623 3681 dbSNP
rs918808140 3682 dbSNP
rs964559494 3687 dbSNP
rs1331649766 3696 dbSNP
rs931567813 3705 dbSNP
rs1480773790 3707 dbSNP
rs1384310248 3714 dbSNP
rs1201843942 3722 dbSNP
rs995805823 3723 dbSNP
rs1296476775 3725 dbSNP
rs1029942807 3727 dbSNP
rs954498504 3743 dbSNP
rs1229422455 3747 dbSNP
rs34829229 3753 dbSNP
rs983201367 3768 dbSNP
rs908062375 3769 dbSNP
rs576283140 3774 dbSNP
rs1203065874 3778 dbSNP
rs1302459561 3782 dbSNP
rs1251616293 3783 dbSNP
rs1375824885 3792 dbSNP
rs1296608287 3793 dbSNP
rs1344249128 3796 dbSNP
rs963593772 3801 dbSNP
rs1198621935 3803 dbSNP
rs1314807446 3811 dbSNP
rs1433447185 3812 dbSNP
rs973957913 3816 dbSNP
rs1264894536 3820 dbSNP
rs948274340 3825 dbSNP
rs749390674 3826 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agacccgagacugccAACCGu 5'
                         ||||| 
Target 5' ---------------UUGGCa 3'
 		1 - 6
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000290015.2 | 3UTR | UUGGCACUUCCCCCAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
91 hsa-miR-5189-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT159806 PPP3R1 protein phosphatase 3 regulatory subunit B, alpha 2 4
MIRT441371 KIAA0513 KIAA0513 2 4
MIRT441381 FRS2 fibroblast growth factor receptor substrate 2 2 2
MIRT441403 FAM9C family with sequence similarity 9 member C 2 2
MIRT441434 KMT2A lysine methyltransferase 2A 2 2
MIRT441539 CHD7 chromodomain helicase DNA binding protein 7 2 2
MIRT441706 RP1L1 RP1 like 1 2 2
MIRT441853 KCNJ10 potassium voltage-gated channel subfamily J member 10 2 2
MIRT441964 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT442090 ZNRF2 zinc and ring finger 2 2 2
MIRT442162 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT442194 CCDC132 VPS50, EARP/GARPII complex subunit 2 2
MIRT442334 WNT9B Wnt family member 9B 2 2
MIRT442481 SLC10A7 solute carrier family 10 member 7 2 2
MIRT442665 PNN pinin, desmosome associated protein 2 2
MIRT442976 PHACTR2 phosphatase and actin regulator 2 2 2
MIRT443044 HPS4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 2 2
MIRT443112 VLDLR very low density lipoprotein receptor 2 2
MIRT443138 MTMR6 myotubularin related protein 6 2 2
MIRT443180 DENND4C DENN domain containing 4C 2 2
MIRT443271 TSPAN15 tetraspanin 15 2 2
MIRT443355 XPR1 xenotropic and polytropic retrovirus receptor 1 2 2
MIRT443371 PLXNA2 plexin A2 2 2
MIRT443380 CHML CHM like, Rab escort protein 2 2 2
MIRT443415 HOXA1 homeobox A1 2 2
MIRT443666 FLT1 fms related tyrosine kinase 1 2 2
MIRT443720 TAF1B TATA-box binding protein associated factor, RNA polymerase I subunit B 2 2
MIRT443727 USP14 ubiquitin specific peptidase 14 2 2
MIRT443798 SREBF2 sterol regulatory element binding transcription factor 2 2 2
MIRT472529 NACC1 nucleus accumbens associated 1 2 4
MIRT479151 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT479280 CHD4 chromodomain helicase DNA binding protein 4 2 6
MIRT485414 MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 2 4
MIRT491210 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT494879 CERS4 ceramide synthase 4 2 2
MIRT494917 NDUFC2-KCTD14 NDUFC2-KCTD14 readthrough 2 2
MIRT495018 C2CD4B C2 calcium dependent domain containing 4B 2 2
MIRT495030 FAM179A TOG array regulator of axonemal microtubules 2 2 4
MIRT495301 CHST12 carbohydrate sulfotransferase 12 2 2
MIRT495406 SPPL3 signal peptide peptidase like 3 2 2
MIRT496156 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT496643 MFAP3 microfibril associated protein 3 2 2
MIRT496654 PITPNM3 PITPNM family member 3 2 2
MIRT496707 DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 2 2
MIRT496907 TRIM56 tripartite motif containing 56 2 2
MIRT496918 GUSB glucuronidase beta 2 2
MIRT497451 DDR2 discoidin domain receptor tyrosine kinase 2 2 2
MIRT498336 PRELID2 PRELI domain containing 2 2 2
MIRT498367 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT498382 GPRC5B G protein-coupled receptor class C group 5 member B 2 2
MIRT498396 KIF6 kinesin family member 6 2 2
MIRT499062 CTBP1 C-terminal binding protein 1 2 4
MIRT525235 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT528266 GPRIN2 G protein regulated inducer of neurite outgrowth 2 2 2
MIRT528320 GIGYF2 GRB10 interacting GYF protein 2 2 2
MIRT533128 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT535654 NLN neurolysin 2 4
MIRT535691 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT574157 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT574560 NR2F2 nuclear receptor subfamily 2 group F member 2 2 2
MIRT576580 Ptbp1 polypyrimidine tract binding protein 1 2 2
MIRT618622 GREB1 growth regulation by estrogen in breast cancer 1 2 4
MIRT619234 FBXL4 F-box and leucine rich repeat protein 4 2 2
MIRT621894 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT624458 CALCOCO2 calcium binding and coiled-coil domain 2 2 2
MIRT630109 PNPLA3 patatin like phospholipase domain containing 3 2 2
MIRT640034 NRXN3 neurexin 3 2 2
MIRT642824 SOD2 superoxide dismutase 2 2 2
MIRT645010 NGRN neugrin, neurite outgrowth associated 2 2
MIRT646486 APBB3 amyloid beta precursor protein binding family B member 3 2 2
MIRT648793 VPS8 VPS8, CORVET complex subunit 2 2
MIRT649091 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT649956 RCBTB1 RCC1 and BTB domain containing protein 1 2 2
MIRT653049 STON2 stonin 2 2 2
MIRT657770 GLRX2 glutaredoxin 2 2 2
MIRT658177 FBXO9 F-box protein 9 2 2
MIRT662988 TMEM59 transmembrane protein 59 2 2
MIRT663438 FBXO2 F-box protein 2 2 2
MIRT669209 CBX8 chromobox 8 2 2
MIRT687227 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT690849 PVR poliovirus receptor 2 2
MIRT692246 POLR3F RNA polymerase III subunit F 2 2
MIRT700688 POLR3D RNA polymerase III subunit D 2 2
MIRT704848 CD55 CD55 molecule (Cromer blood group) 2 2
MIRT710305 NUDT16 nudix hydrolase 16 2 2
MIRT712826 TIGIT T-cell immunoreceptor with Ig and ITIM domains 2 2
MIRT714001 SLC2A11 solute carrier family 2 member 11 2 2
MIRT715671 HEBP2 heme binding protein 2 2 2
MIRT718025 SSX2IP SSX family member 2 interacting protein 2 2
MIRT720733 ELOVL7 ELOVL fatty acid elongase 7 2 2
MIRT723280 KRTAP21-2 keratin associated protein 21-2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-5189-3p Osimertinib 71496458 NSC779217 approved resistant Low Non-Small Cell Lung Cancer tissue
hsa-miR-5189-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-5189-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-5189-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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