miRTarBase - #MIRT442407


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pre-miRNA Information
pre-miRNA hsa-mir-548ah   
Genomic Coordinates chr4: 76575551 - 76575626
Description Homo sapiens miR-548ah stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548ah-3p
Sequence 47| CAAAAACUGCAGUUACUUUUGC |68
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 4 + 76575599 29233923 MiREDiBase
A-to-I 4 4 + 76575600 29233923 MiREDiBase
A-to-I 5 4 + 76575601 29233923 MiREDiBase
A-to-I 6 4 + 76575602 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1486932451 12 dbSNP
rs1036377818 16 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ILDR1   
Synonyms DFNB42, ILDR1alpha, ILDR1alpha', ILDR1beta
Description immunoglobulin like domain containing receptor 1
Transcript NM_175924   
Expression
Putative miRNA Targets on ILDR1
3'UTR of ILDR1
(miRNA target sites are highlighted)		 
>ILDR1|NM_175924|3'UTR
   1 TCACCAAGCACAGCACAACTTCTGTGGCTACTTCTCGGCTCCTGTGTGTCATCAGCATCACCTAGGTTTCCAGCTGACTT
  81 GGGAACTGCAAGTCTGAGTCTAACAGTTTTTGGCTTAGATTCTGAGAATCAAATAGAAGAATTTTAAATACAAGAGTTTG
 161 AGATTGGGTATAGTGGCTCACACCTGTAATCACAGCACTTTGGGAGGCTAAGAATCACTTGAGACTAGGAGTTCAAGATC
 241 AGCCTGGGAAACATAGTGAGACCCCGTCTCTACAAAAAATATAAAAATTAGTTAGGTGTGGTGGCATGCACTTGTAGTCC
 321 CAGCTACTCAAGAGGCTGAGGCAGAAGGATCCCTTGAGCCCAGGAGTGCAAGGCTGCAATGAGCCAGGATCCCATGATCA
 401 CACATCTGTATTCCAGCCTGGGCAATAGAGCAAGTCCCCATTACTAAAAAACCCAAAAGGCCAAAAAACAAAAAAGTTAG
 481 AGTTCGAGGAATTACCAACTGTAGTTTTAGCCTTGGTTCATGCTCTCTTGCATATTTATATAATCTCTGACTTGTAATGG
 561 ACCCTGACTGGAATGTGATCCCTCAGGAACTTAGTAGCCTGAGTCTTTCAGTAGACTACACTGCCCAGAACCCTGGCCAT
 641 TCTCAAAATGAGAACTTGGGAATGTTTAAGAAGAAATCAAACATGTTTCAGGAAAAGGAAATCTATGGAGTATTATAGGG
 721 ACATTCCCATGGGAATGTATCTTCCTCCATGGCATGTCTTGAGGGTCCTTTCTTGTTAGGAGTTTATCCTGCCAGCCCAT
 801 AAATGGACTATTTATTGTAAGTGTAGAAAATCACAGAGAAGCAGTTTTGCACCAGCCTTATTCCTGTGCCTTGTTTTCCT
 881 CTTGCTCTTTTTTTACCTGTATATCTAATTTATATTTTCATATATATTGTGTATTGATTGAAGTCACTTTAAATCCTTCT
 961 TGGGAATGACACAGTATATAAATAAGGAAGAAAGAAAACATGCCAAGCTGAGCATGCTGCTCCAAATAAATATCTGCTTT
1041 CCTAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cguuUUCA---UU-GA-CGUCAAAAAc 5'
              ||||   |: ||  |||||||| 
Target 5' ctgcAAGTCTGAGTCTAACAGTTTTTg 3'
 86 - 112 150.00 -12.31
2 
miRNA  3' cgUUUUCA---UUGACGUCAAAAac 5'
            ::|| |   |||||:||||||  
Target 5' gaGGAATTACCAACTGTAGTTTTag 3'
 486 - 510 148.00 -12.50
3 
miRNA  3' cguUUUCAUUGACGUCAAAAac 5'
             |:|| ||  ||||||||  
Target 5' cacAGAG-AA--GCAGTTTTgc 3'
 832 - 850 138.00 -9.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
667248 11 ClinVar
1203287 266 ClinVar
COSN31482179 36 COSMIC
COSN30507104 42 COSMIC
COSN31511695 66 COSMIC
COSN30450884 70 COSMIC
COSN30453107 83 COSMIC
COSN30155597 94 COSMIC
COSN30451144 106 COSMIC
COSN31530545 107 COSMIC
COSN30167858 139 COSMIC
COSN1083322 142 COSMIC
COSN26494605 728 COSMIC
COSN9234277 994 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1191276930 6 dbSNP
rs775202902 11 dbSNP
rs150481354 15 dbSNP
rs1478259133 16 dbSNP
rs1239773407 17 dbSNP
rs372428576 19 dbSNP
rs776792036 20 dbSNP
rs1330769400 24 dbSNP
rs1465610620 25 dbSNP
rs1285978544 26 dbSNP
rs771356103 31 dbSNP
rs747424761 37 dbSNP
rs894413796 41 dbSNP
rs1398494643 52 dbSNP
rs999250175 53 dbSNP
rs202226862 55 dbSNP
rs1341571953 60 dbSNP
rs1218845091 61 dbSNP
rs1183120795 71 dbSNP
rs1442824983 72 dbSNP
rs1324737190 79 dbSNP
rs867664610 83 dbSNP
rs201749129 91 dbSNP
rs778320546 92 dbSNP
rs185522579 94 dbSNP
rs748223411 99 dbSNP
rs755137709 105 dbSNP
rs903932637 106 dbSNP
rs754067165 119 dbSNP
rs767179327 128 dbSNP
rs1378159683 130 dbSNP
rs757100881 131 dbSNP
rs754309930 132 dbSNP
rs141335434 133 dbSNP
rs1196029831 134 dbSNP
rs763038125 136 dbSNP
rs1466013297 138 dbSNP
rs1037619352 148 dbSNP
rs775080019 154 dbSNP
rs1207588772 167 dbSNP
rs759223170 170 dbSNP
rs941380433 173 dbSNP
rs1418383192 181 dbSNP
rs1275973261 187 dbSNP
rs571262745 190 dbSNP
rs1047474505 191 dbSNP
rs1329848609 192 dbSNP
rs930052001 193 dbSNP
rs1290221778 195 dbSNP
rs1365093984 196 dbSNP
rs776379104 197 dbSNP
rs922641725 206 dbSNP
rs976240063 209 dbSNP
rs753549007 212 dbSNP
rs550947393 216 dbSNP
rs1488460646 219 dbSNP
rs1218548577 237 dbSNP
rs910836218 243 dbSNP
rs964199018 244 dbSNP
rs911492468 254 dbSNP
rs1269538361 257 dbSNP
rs1437977474 262 dbSNP
rs1158515519 263 dbSNP
rs1381504068 265 dbSNP
rs181628071 266 dbSNP
rs371813355 266 dbSNP
rs549594681 266 dbSNP
rs565610957 268 dbSNP
rs764562889 278 dbSNP
rs1435294005 280 dbSNP
rs1299736060 291 dbSNP
rs1372459991 292 dbSNP
rs1443952115 296 dbSNP
rs1462286273 307 dbSNP
rs761032107 309 dbSNP
rs1371448050 311 dbSNP
rs1163128819 312 dbSNP
rs1308379564 312 dbSNP
rs1354363256 314 dbSNP
rs951787435 329 dbSNP
rs373788728 333 dbSNP
rs138335629 361 dbSNP
rs189041551 363 dbSNP
rs1419074136 368 dbSNP
rs1248688619 373 dbSNP
rs1249020225 376 dbSNP
rs999114876 377 dbSNP
rs1178141531 383 dbSNP
rs1238911737 384 dbSNP
rs1442069056 386 dbSNP
rs970455560 394 dbSNP
rs1024679873 396 dbSNP
rs1406326983 399 dbSNP
rs563334520 404 dbSNP
rs1164964406 407 dbSNP
rs1396248077 408 dbSNP
rs1012071018 426 dbSNP
rs772444510 445 dbSNP
rs1330049778 452 dbSNP
rs775889751 452 dbSNP
rs768023200 454 dbSNP
rs1444277796 458 dbSNP
rs1403730 460 dbSNP
rs1290615496 461 dbSNP
rs1403729 462 dbSNP
rs574405506 465 dbSNP
rs1219732238 469 dbSNP
rs1037912911 470 dbSNP
rs1006149312 471 dbSNP
rs759586255 475 dbSNP
rs1316262003 479 dbSNP
rs1024124235 485 dbSNP
rs530892554 486 dbSNP
rs1439704350 488 dbSNP
rs1208561864 490 dbSNP
rs958864459 501 dbSNP
rs1034308459 511 dbSNP
rs1237694203 513 dbSNP
rs1315108357 514 dbSNP
rs1000523178 517 dbSNP
rs1476620909 520 dbSNP
rs565305925 521 dbSNP
rs1400384732 524 dbSNP
rs1047095709 530 dbSNP
rs1332058363 531 dbSNP
rs929957411 532 dbSNP
rs1391790004 533 dbSNP
rs1043721475 534 dbSNP
rs746000667 536 dbSNP
rs1009583474 540 dbSNP
rs892575339 545 dbSNP
rs145679236 552 dbSNP
rs1294878015 559 dbSNP
rs1338228093 574 dbSNP
rs1302797123 591 dbSNP
rs1279087545 602 dbSNP
rs774388190 603 dbSNP
rs1217566546 619 dbSNP
rs1278484322 623 dbSNP
rs771213886 625 dbSNP
rs1403268325 627 dbSNP
rs1213697339 634 dbSNP
rs1040509110 639 dbSNP
rs911412928 644 dbSNP
rs1163970934 649 dbSNP
rs990026660 651 dbSNP
rs1453114884 655 dbSNP
rs958322828 658 dbSNP
rs924150893 662 dbSNP
rs1423917477 664 dbSNP
rs1414957949 684 dbSNP
rs1362606812 687 dbSNP
rs1161858710 693 dbSNP
rs1420071144 697 dbSNP
rs749499621 703 dbSNP
rs944929814 706 dbSNP
rs970362185 707 dbSNP
rs1024710777 712 dbSNP
rs910794198 713 dbSNP
rs1050662412 716 dbSNP
rs1231384023 716 dbSNP
rs1345871572 717 dbSNP
rs1237136185 720 dbSNP
rs1490757194 726 dbSNP
rs930901682 727 dbSNP
rs920232907 732 dbSNP
rs1016104679 735 dbSNP
rs1204080120 739 dbSNP
rs547429137 753 dbSNP
rs1448350483 758 dbSNP
rs1262445728 767 dbSNP
rs1245624663 778 dbSNP
rs1454338890 778 dbSNP
rs886396639 782 dbSNP
rs1378433220 786 dbSNP
rs1418819195 795 dbSNP
rs1158989472 803 dbSNP
rs573592263 817 dbSNP
rs773364992 822 dbSNP
rs867131362 832 dbSNP
rs1281223394 835 dbSNP
rs1026226638 836 dbSNP
rs994198774 848 dbSNP
rs1443212877 849 dbSNP
rs185105870 850 dbSNP
rs1376773167 857 dbSNP
rs1241568904 860 dbSNP
rs1347677112 875 dbSNP
rs901155248 888 dbSNP
rs1381750437 895 dbSNP
rs961775437 898 dbSNP
rs1207635211 901 dbSNP
rs542859126 908 dbSNP
rs1041044345 912 dbSNP
rs942813262 913 dbSNP
rs771165221 922 dbSNP
rs1053961726 930 dbSNP
rs936834404 939 dbSNP
rs1456203796 944 dbSNP
rs574224717 949 dbSNP
rs1162830069 954 dbSNP
rs747936869 956 dbSNP
rs958525163 959 dbSNP
rs557265701 968 dbSNP
rs924231632 977 dbSNP
rs1174794046 978 dbSNP
rs1000089468 984 dbSNP
rs142327740 999 dbSNP
rs781039803 1012 dbSNP
rs949081784 1018 dbSNP
rs537185248 1019 dbSNP
rs1377876118 1022 dbSNP
rs1309797176 1024 dbSNP
rs571233269 1036 dbSNP
rs1191965466 1037 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000273691.3 | 3UTR | UUGGCUUAGAUUCUGAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000273691.3 | 3UTR | UUGGCUUAGAUUCUGAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
269 hsa-miR-548ah-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055349 PDCD4 programmed cell death 4 2 2
MIRT078710 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT088880 FOXN2 forkhead box N2 2 10
MIRT099612 ID4 inhibitor of DNA binding 4, HLH protein 2 4
MIRT111805 MPZL1 myelin protein zero like 1 2 2
MIRT166778 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 2
MIRT221310 LMBR1 limb development membrane protein 1 2 2
MIRT269387 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT309062 C4ORF3 chromosome 4 open reading frame 3 2 2
MIRT318550 SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein 2 2
MIRT325436 CKS2 CDC28 protein kinase regulatory subunit 2 2 2
MIRT331326 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT336802 ARF1 ADP ribosylation factor 1 2 4
MIRT350505 MRGBP MRG domain binding protein 2 6
MIRT374401 M6PR mannose-6-phosphate receptor, cation dependent 2 4
MIRT399357 IER2 immediate early response 2 2 2
MIRT401033 MOB1B MOB kinase activator 1B 2 4
MIRT441729 HAUS6 HAUS augmin like complex subunit 6 2 2
MIRT442381 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442407 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT443989 GJD3 gap junction protein delta 3 2 4
MIRT444047 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT444245 CHMP1B charged multivesicular body protein 1B 2 2
MIRT444402 FRMD5 FERM domain containing 5 2 2
MIRT444463 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT444644 HSBP1 heat shock factor binding protein 1 2 2
MIRT444854 EXD2 exonuclease 3'-5' domain containing 2 2 2
MIRT444988 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT445107 ZNF207 zinc finger protein 207 2 2
MIRT445449 HSPA14 heat shock protein family A (Hsp70) member 14 2 4
MIRT445515 CRNKL1 crooked neck pre-mRNA splicing factor 1 2 4
MIRT445590 RCC2 regulator of chromosome condensation 2 2 2
MIRT445679 TNFSF15 TNF superfamily member 15 2 2
MIRT445733 PGK1 phosphoglycerate kinase 1 2 2
MIRT445827 DNAAF3 dynein axonemal assembly factor 3 2 2
MIRT445996 CD1D CD1d molecule 2 2
MIRT446068 RABIF RAB interacting factor 2 2
MIRT446146 ST6GAL2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 2 2
MIRT446302 ACSL3 acyl-CoA synthetase long chain family member 3 2 2
MIRT446426 ABHD2 abhydrolase domain containing 2 2 2
MIRT447263 C3orf30 chromosome 3 open reading frame 30 2 2
MIRT447692 MTPAP mitochondrial poly(A) polymerase 2 2
MIRT447753 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT447883 LMAN1 lectin, mannose binding 1 2 2
MIRT448032 GSR glutathione-disulfide reductase 2 2
MIRT448155 P2RY10 purinergic receptor P2Y10 2 2
MIRT448215 SNAI2 snail family transcriptional repressor 2 2 2
MIRT448414 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT448890 DENND4C DENN domain containing 4C 2 2
MIRT449043 ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 2 2
MIRT449269 PALM2 paralemmin 2 2 2
MIRT449571 GPC5 glypican 5 2 4
MIRT450116 IMP3 IMP3, U3 small nucleolar ribonucleoprotein 2 2
MIRT450149 GABRB3 gamma-aminobutyric acid type A receptor beta3 subunit 2 2
MIRT450606 EXOC2 exocyst complex component 2 2 2
MIRT459247 ADRBK1 G protein-coupled receptor kinase 2 2 2
MIRT464464 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465114 TSC22D2 TSC22 domain family member 2 2 4
MIRT466778 SUZ12 SUZ12 polycomb repressive complex 2 subunit 2 4
MIRT467990 SKIL SKI like proto-oncogene 2 4
MIRT469263 RHOB ras homolog family member B 2 2
MIRT470717 POGK pogo transposable element derived with KRAB domain 2 2
MIRT472380 NEK7 NIMA related kinase 7 2 2
MIRT475022 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT475248 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 2
MIRT475678 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT479405 CDKN1B cyclin dependent kinase inhibitor 1B 2 10
MIRT482621 ABCE1 ATP binding cassette subfamily E member 1 2 2
MIRT490488 FEM1C fem-1 homolog C 2 2
MIRT492176 SOX4 SRY-box 4 2 10
MIRT493559 HSPA5 heat shock protein family A (Hsp70) member 5 2 2
MIRT494647 ARNTL aryl hydrocarbon receptor nuclear translocator like 2 2
MIRT497510 ZNF652 zinc finger protein 652 2 4
MIRT499150 HSPA1B heat shock protein family A (Hsp70) member 1B 2 8
MIRT502081 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT502824 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 6
MIRT503936 FBXL13 F-box and leucine rich repeat protein 13 2 4
MIRT504229 MYO6 myosin VI 2 2
MIRT506016 PURA purine rich element binding protein A 2 2
MIRT506416 NHLRC3 NHL repeat containing 3 2 6
MIRT508022 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT508293 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 4
MIRT508358 HES7 hes family bHLH transcription factor 7 2 6
MIRT510848 RARB retinoic acid receptor beta 2 6
MIRT511509 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT511980 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 4
MIRT512301 AMER1 APC membrane recruitment protein 1 2 6
MIRT515651 MYBPC1 myosin binding protein C, slow type 2 2
MIRT518423 SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 2 2
MIRT519692 ZNF620 zinc finger protein 620 2 2
MIRT521598 PSMA2 proteasome subunit alpha 2 2 4
MIRT527241 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT527279 FBLN2 fibulin 2 2 2
MIRT527377 MGARP mitochondria localized glutamic acid rich protein 2 2
MIRT527448 COL4A3 collagen type IV alpha 3 chain 2 2
MIRT528342 TBC1D22B TBC1 domain family member 22B 2 2
MIRT529098 ZNF100 zinc finger protein 100 2 2
MIRT529661 ZNF81 zinc finger protein 81 2 2
MIRT530057 TRIM72 tripartite motif containing 72 2 2
MIRT530271 MKRN3 makorin ring finger protein 3 2 2
MIRT530873 TRUB1 TruB pseudouridine synthase family member 1 2 2
MIRT531246 FANCC Fanconi anemia complementation group C 2 2
MIRT531408 TMEM18 transmembrane protein 18 2 2
MIRT534421 SEMA4F ssemaphorin 4F 2 2
MIRT534500 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT534765 RASGEF1A RasGEF domain family member 1A 2 2
MIRT534942 PTBP3 polypyrimidine tract binding protein 3 2 2
MIRT536972 HAS3 hyaluronan synthase 3 2 2
MIRT537633 ERI1 exoribonuclease 1 2 2
MIRT537720 ELK3 ELK3, ETS transcription factor 2 2
MIRT538772 CABLES1 Cdk5 and Abl enzyme substrate 1 2 2
MIRT540958 SLC25A43 solute carrier family 25 member 43 2 2
MIRT541274 GPC4 glypican 4 2 4
MIRT543347 ZNF829 zinc finger protein 829 2 2
MIRT543617 MFAP3 microfibril associated protein 3 2 2
MIRT543644 YY2 YY2 transcription factor 2 2
MIRT544227 GTF2B general transcription factor IIB 2 2
MIRT544413 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544939 SNCB synuclein beta 2 2
MIRT545321 SPC25 SPC25, NDC80 kinetochore complex component 2 2
MIRT546088 VEZF1 vascular endothelial zinc finger 1 2 2
MIRT548516 DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 2 2
MIRT548632 DAZAP1 DAZ associated protein 1 2 4
MIRT551028 SPPL3 signal peptide peptidase like 3 2 2
MIRT552058 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 4
MIRT553268 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT553297 TSPAN3 tetraspanin 3 2 2
MIRT553613 TM7SF3 transmembrane 7 superfamily member 3 2 2
MIRT554201 SLC35D1 solute carrier family 35 member D1 2 2
MIRT554795 RGPD4 RANBP2-like and GRIP domain containing 4 2 2
MIRT554838 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT555709 PDZD8 PDZ domain containing 8 2 2
MIRT556063 MTF2 metal response element binding transcription factor 2 2 4
MIRT557999 FAM160B1 family with sequence similarity 160 member B1 2 2
MIRT558674 CNIH cornichon family AMPA receptor auxiliary protein 1 1 1
MIRT558954 CBFB core-binding factor beta subunit 2 2
MIRT559026 C20orf24 chromosome 20 open reading frame 24 2 2
MIRT559103 C18orf25 chromosome 18 open reading frame 25 2 2
MIRT559858 GSKIP GSK3B interacting protein 2 2
MIRT561591 SKI SKI proto-oncogene 2 2
MIRT562262 GRB2 growth factor receptor bound protein 2 2 2
MIRT562413 EIF2S2 eukaryotic translation initiation factor 2 subunit beta 2 2
MIRT562646 ARID1A AT-rich interaction domain 1A 2 4
MIRT564273 DEPDC1B DEP domain containing 1B 2 2
MIRT565301 TMEM64 transmembrane protein 64 2 2
MIRT565392 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT566564 OTUD4 OTU deubiquitinase 4 2 2
MIRT566708 MTMR3 myotubularin related protein 3 2 2
MIRT566784 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT568411 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT571817 PHF19 PHD finger protein 19 2 2
MIRT571989 HOXA9 homeobox A9 2 2
MIRT573750 KHSRP KH-type splicing regulatory protein 2 2
MIRT573993 DDX21 DExD-box helicase 21 2 2
MIRT574488 RPS16 ribosomal protein S16 2 2
MIRT574507 PSAT1 phosphoserine aminotransferase 1 2 2
MIRT574553 NRBF2 nuclear receptor binding factor 2 2 2
MIRT576680 H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 2 2
MIRT608353 ZRANB1 zinc finger RANBP2-type containing 1 2 2
MIRT608634 ATP9A ATPase phospholipid transporting 9A (putative) 2 6
MIRT609179 ZNF581 zinc finger protein 581 2 2
MIRT609792 NHSL1 NHS like 1 2 2
MIRT610675 SYT2 synaptotagmin 2 2 4
MIRT610880 NUDCD3 NudC domain containing 3 2 2
MIRT611024 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT611670 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT612067 PDGFRA platelet derived growth factor receptor alpha 2 2
MIRT612486 SLC25A11 solute carrier family 25 member 11 2 2
MIRT612648 PSPC1 paraspeckle component 1 2 2
MIRT612688 PLXNA4 plexin A4 2 2
MIRT613108 ESR1 estrogen receptor 1 2 2
MIRT613549 AMPD3 adenosine monophosphate deaminase 3 2 2
MIRT614532 SUB1 SUB1 homolog, transcriptional regulator 2 2
MIRT614569 GMPR guanosine monophosphate reductase 2 2
MIRT614661 ZNF608 zinc finger protein 608 2 2
MIRT614675 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT615313 CCDC158 coiled-coil domain containing 158 2 2
MIRT616112 GGCX gamma-glutamyl carboxylase 2 2
MIRT617750 MICA MHC class I polypeptide-related sequence A 2 2
MIRT618797 ZIC2 Zic family member 2 2 2
MIRT619227 FUNDC2 FUN14 domain containing 2 2 2
MIRT620281 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT620491 XKR6 XK related 6 2 2
MIRT622613 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT622967 OXSR1 oxidative stress responsive 1 2 2
MIRT623482 KDM5A lysine demethylase 5A 2 2
MIRT623626 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT623699 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT624815 ADAM17 ADAM metallopeptidase domain 17 2 2
MIRT625188 GRIK4 glutamate ionotropic receptor kainate type subunit 4 2 2
MIRT625367 CDKL2 cyclin dependent kinase like 2 2 2
MIRT625919 GBP6 guanylate binding protein family member 6 2 2
MIRT625962 RNF2 ring finger protein 2 2 2
MIRT626264 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT626425 ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 2 2
MIRT626851 FDX1 ferredoxin 1 2 2
MIRT628014 MEF2C myocyte enhancer factor 2C 2 2
MIRT628047 LIMD1 LIM domains containing 1 2 2
MIRT628360 CCDC117 coiled-coil domain containing 117 2 2
MIRT628461 ANAPC16 anaphase promoting complex subunit 16 2 2
MIRT630929 UNC93A unc-93 homolog A 2 2
MIRT635226 CD59 CD59 molecule (CD59 blood group) 2 2
MIRT635478 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT638149 TTC26 tetratricopeptide repeat domain 26 2 2
MIRT638295 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT638431 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT640275 TCF24 transcription factor 24 2 2
MIRT641183 STX4 syntaxin 4 2 2
MIRT642295 ZNF99 zinc finger protein 99 2 2
MIRT643270 ZNF566 zinc finger protein 566 2 2
MIRT643581 CTNNA3 catenin alpha 3 2 2
MIRT644173 GIN1 gypsy retrotransposon integrase 1 2 2
MIRT644433 VDR vitamin D receptor 2 2
MIRT644614 C17orf77 chromosome 17 open reading frame 77 2 2
MIRT644855 PGM2 phosphoglucomutase 2 2 2
MIRT645449 ATF6B activating transcription factor 6 beta 2 2
MIRT647203 ZNF583 zinc finger protein 583 2 2
MIRT649421 CDC14B cell division cycle 14B 2 2
MIRT650499 UFM1 ubiquitin fold modifier 1 2 2
MIRT650695 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT651209 ZNF280B zinc finger protein 280B 2 2
MIRT653782 SIX4 SIX homeobox 4 2 2
MIRT655057 PKN2 protein kinase N2 2 2
MIRT655707 NUDT21 nudix hydrolase 21 2 2
MIRT656943 KIAA1456 KIAA1456 2 2
MIRT658275 FAXC failed axon connections homolog 2 2
MIRT658519 ETV3 ETS variant 3 2 2
MIRT658655 ENAH ENAH, actin regulator 2 2
MIRT658688 EMP2 epithelial membrane protein 2 2 2
MIRT659241 CXCR5 C-X-C motif chemokine receptor 5 2 2
MIRT659289 CTDSPL2 CTD small phosphatase like 2 2 2
MIRT660101 BTBD3 BTB domain containing 3 2 2
MIRT660463 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT663648 INTU inturned planar cell polarity protein 2 2
MIRT664065 KIAA1551 KIAA1551 2 2
MIRT666140 SPATS2L spermatogenesis associated serine rich 2 like 2 2
MIRT675549 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT684998 RPL10A ribosomal protein L10a 2 2
MIRT685687 TRIM45 tripartite motif containing 45 2 2
MIRT687485 NHLRC2 NHL repeat containing 2 2 2
MIRT687799 KCNJ15 potassium voltage-gated channel subfamily J member 15 2 2
MIRT687911 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT687962 HHIP hedgehog interacting protein 2 2
MIRT689214 ZNF574 zinc finger protein 574 2 2
MIRT689481 SCIMP SLP adaptor and CSK interacting membrane protein 2 2
MIRT690495 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT692284 XRN2 5'-3' exoribonuclease 2 2 2
MIRT693054 KIAA1324 KIAA1324 2 2
MIRT697437 ZFHX3 zinc finger homeobox 3 2 2
MIRT698469 TJP1 tight junction protein 1 2 2
MIRT699027 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699779 SEMA4D semaphorin 4D 2 2
MIRT701863 MRO maestro 2 2
MIRT702152 MAP3K1 mitogen-activated protein kinase kinase kinase 1 2 2
MIRT702235 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT703744 FAM126B family with sequence similarity 126 member B 2 2
MIRT704271 DGS2 DiGeorge syndrome/velocardiofacial syndrome complex 2 2 2
MIRT707745 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT709855 SNX12 sorting nexin 12 2 2
MIRT712741 LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 2 2
MIRT712948 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT713142 PKIA cAMP-dependent protein kinase inhibitor alpha 2 2
MIRT715529 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT718275 ZNF749 zinc finger protein 749 2 2
MIRT720146 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT722713 ZNF460 zinc finger protein 460 2 2
MIRT723253 TMLHE trimethyllysine hydroxylase, epsilon 2 2
MIRT724240 DGKE diacylglycerol kinase epsilon 2 2
MIRT725076 WTIP WT1 interacting protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548ah-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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