miRTarBase - #MIRT442526


—
pre-miRNA Information
pre-miRNA hsa-mir-4307   
Genomic Coordinates chr14: 26908642 - 26908725
Description Homo sapiens miR-4307 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4307
Sequence 56| AAUGUUUUUUCCUGUUUCC |74
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1056441032 1 dbSNP
rs776987575 3 dbSNP
rs948027524 8 dbSNP
rs930210474 12 dbSNP
rs191460273 13 dbSNP
rs538831777 14 dbSNP
rs1158802910 15 dbSNP
rs1047679599 17 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MOB3B   
Synonyms C9orf35, MOB1D, MOBKL2B
Description MOB kinase activator 3B
Transcript NM_024761   
Expression
Putative miRNA Targets on MOB3B
3'UTR of MOB3B
(miRNA target sites are highlighted)		 
>MOB3B|NM_024761|3'UTR
   1 TGCTCCACCTCACCCTTTGGAAGAAAGGAAAGCTGTTTCCTCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCCTGGC
  81 TGAAATGACACACCTACTCCCAGGAACAGCAGAGGTGGAGGCAAGCAGTGACTCCTGAGAGACATTCCCCACTCACTTTG
 161 TGTGCTCTTAACCTTCTGAGTGCTGCTAGCCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCT
 241 TGACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATGGCACAGTTCTGCCTGTGACCTGCCG
 321 CCTAAGCTTTACTGGAATTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGTCAGCTGGCC
 401 GACTTCTCTGTGATTGGTTTTTTAAGTGCCGGGTGAATTTTGGACCTCTGGATGTGCAGCAAGTTTTTATGCAATAAGCC
 481 TTCCTTTCAGGTCTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGCTCTGAGACACCTGA
 561 ACCCCTACCCATCCCCTGCACCTCCCTACTCTCCCTGCCGAGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGG
 641 GACACTCCATGGGGTGGCTTGTCTCTGCCCCAAACAGGGTCTTCACGTTCTAACTGCAGGGAAGAGACTGGTTACTAGCG
 721 TAAAGCTGACAAGTTACCAGTTCACCTGATCAGAATGTATTTTTTATAACCACCATCATTCCTTGTCTCTTCAGTGGAAG
 801 ATATTCTTTCCTGTTTCCCAGAAGAGAGAAATAAAAGTCCTAAATAACTAAGAATGATCAGCGGGAGCGTTGGGCATGAT
 881 TACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACATAATACTAACATTTCAGTGAAAAAAGTA
 961 CAATTGGTTATTTGGTACGTGTAGATTTAACACCCAGACGGCTGACTTGTAACCCTCCCCACTAGCCTTCTGAGCATTTA
1041 AACCCAGCCGTCATTCTCTCCCCACTCCACGCTCCCCACTCCTCTGCCACGTTATGTTACGGCACAAAATTAATTTCTGC
1121 CCCTGTGATTGGGCCACGGTTGCCAAGGTAACAGTGGAGCTGGAGCTAACTTCCTTCTTTCATCCTTTCCAATTTTTCTA
1201 TTCCAGAAGACAGTCAGAATAATGCATTCTGTACTACATCCTGCCTTTTGAAACCTAAATGAGTTTTCGTTGATGAAATG
1281 TTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGTGACGAGGGGGGTCATAATACTTCCAGTGATC
1361 CTTTTAATTTAGCAAAATATTTGTCGGTGGAGGGAAGTAGATAAGAATGTATTAGTGTATTTTAAAGTAATAATGATTAA
1441 AGAATAACTAAATGACTCTGATTTTGTTTTATCAATCATAATGTGTTAAAGCCCTCTGTGGCTGCCACAAAAGACTAGAA
1521 TCATGAAATCTTTGTCCAAGCTAAGAAAGGGCTGTCTCTGTGGGTACAGTGGCATTCTCTGTTGACCTAACCAAGCAGCC
1601 TGAACCTTGCTTTGTGTCTCGTAAAGGTCATCTCACGGAATCCAATTGCTGCTACCTCACCATGTTGCTGTGCCCTGGTC
1681 AACAATAAACATACTTTTGTCCCCCTTCCTAAGTAACTTTGAGAGGACAAGATAGGCAAAGTTTTTTCCCTACATCTCTT
1761 TTGGCCAAAAGAATATCTGACCATCACAGAGATCCAGAGAACAGAAACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACA
1841 CAGTTACCAGATGGGAATGCAGCACAGTGGCACAGAGAGGTAACTACGGAGCCCATGCCCTGGAGGAACTCTGTAGCTGT
1921 GCATCATGGAACGCCACAGGATTTTTACATTAAAAAGTTGAATATGTTCCTGCATTTCAGCAGTGCATAATCGAGCAGGA
2001 GGCTGGAATCTGGAGACCTTTGTTATTCATTCTTTTTAAGGTTATTTTTTATTAACTGTGCATATGAAATTTCCACTCAA
2081 TTTAAAAATCCAAATCTTTTTAAGCTTCTTGGAAGAATTTCCTCCTGCTTATATTGTTAATTGCACTAATGAACTCTTCT
2161 AGGGTAAATTCTGGCAAACTACCCTTTTTTTTTTTTTAATCACAGAATATTCCTGTTCCCACAGAACTTTGGCACATTCT
2241 GAAGAAAATCTCTGCAGTCAATTTTTATCTCCTCTGCTTGACTGCATCTAACTGTTCATCTCTGTTATAAATGGAGCTTC
2321 AGCCCTCTGGGTCAGAGACTGACAACCCTCCTTCTTCTTCCTAACCTGTCCTACTCTCCTTCTTTTTCTGCTTTCATTTT
2401 AATTTTGGGAAATTTTAAAGTAAAAGTTTCAAAGTTGAAAGATTATAGTGAGTACCCTTATGTCCTTTAGTGCATCAGTT
2481 GTTAATGTTTTGCCTTGTTTTCTTTTCTTCCTTTTTTTTTTTTAAGAGAAGGGGTCTCTCCCTATTTTACCCAAGCTGGC
2561 CTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAGGACTATGGCATGTACCACCGCACCTGCC
2641 TCACATTTTCTTTCTCACTGTAAATACACATTCTTATTCTTGAACCTTCTGAAAATAAGTTGCAGACATCATGAAAATGT
2721 AAAATACTTCATCATATTCTTTCTTTTAATAAGAGCATTGTCCTATAAATCTGCAATATTTTCACGCCCATGAAACTGAA
2801 CACTGATACTGCATAAATCTAATATATGATCCATATTCAAAATTCTCCAGTTGTCCCCAAAATATCCTTTATAGCTGTTT
2881 ATTTTTAAATCCAGGATCCAATCAAGAATTATACGTTATATGTAGTTGTCATTCTCTTTTGTTTCCTTTAATTGATTAGA
2961 GTTGCCCTTTTGTGTGTGTCTGAGTGGTGGGTGGTGGGGTGGTGTTTGTGTATGATGTGCAGTGTGTGTGTGTGTGGTGT
3041 GTCTTTCATGACACTGACATTATTAAAGAGTTCAGGCAAGTTTGTGGAATGTCCCACAATCTAGACTTTTTTACTGATTG
3121 TTTCCTCATTACGAGATACAGGTTACATTTTTTTTCCCAAGACTGCTACATGTGTGATGTTGTTTCCTTACTACTGCCTC
3201 ACCTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAGGTGTTGTCTGCCTGATCCAATCAT
3281 TATCAAGTTCCATAATTCATTATTAAGCTCTGAAATTCAGGACACATACATTTATAGAGTGTGAGGCTGTGCATACGTAC
3361 ATTCATCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAGC
3441 AAAGCATTCATCCCTTTCCATATAACAGGAGGGAGGGGAAGAAGGAAGTTTCCATGTGCAGGCAATACGTGAGAGCATGG
3521 GCAAGTGAGGATTTGTATGCTCCCTGTAGCCAGAGGTGAAATATTCAACGCTTTTATTTTTTCTCCCGTCTTCAATGACC
3601 TCCCATTTGGACCCATAGTTTATTTATAGAGAGCACACACTCCCTAATTGTCAGATGGTTTTTTTGGGAAAACTCTTAGA
3681 TAGTACAGTGAGTTGTGACCCTCCAAAGGATCACAAGTACATAAACAGATACAAAGTATTTATGTGGTATTAAAATTTCA
3761 TGGTGATGGTGCAAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATACTGATCTAGAGTCAT
3841 TTCCTGCTTCTTAAATTGTTCGTTTTCTCTTCCCTGGGTATTTTCTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTT
3921 AAGTGGAAGAAACTTTGAGAGGTTTCTTAATCAATTCCTTCTATCTCTCAAACCATGCCAGTAACTTCCTTGGTGAAAAA
4001 ATCTATACTCCTCTCACAGTTCTTCGGGCATGGAAATTCTATAGCATTCTTTGGTATAACCAACCCACTGAACCCTCCAC
4081 AACATCTTGAATTCCATTCAACTCGAGCTGAAGTATTCTTTTTGAGTTTCAGTATATCTTTTCTAGTGTCCCACTTTTAG
4161 AAAGGTCCAAAGATGATATATAATAAGTGAAAATACAATTAATCAGAGCTTTATTTGCATATCCATTAAATATCTGAAGG
4241 CTATTACCAGTTGTGCTTCAGCCTCCTTTCCCTTGCAATTCTCCCAGGGTGGCATCCTCTACGGAGTCTTGTTGCTCCAT
4321 TGTTGACCACTGATGTAACTCAACGTGAAACCTTCCCAAAGCTCTCCACATCACTCTCTGTTATGGCTGTGACCAGCAGT
4401 GAACATGAAAAGAACTTATTTCATGCCTTCTCCAAACTATATTGTTTCTTTGCTAAGTCCAGACCTGCTTTTTCTACATT
4481 TATAGGTTTTCTATTTTAATCGCCATGCAAAATTCTTTATCATACTCAATCATTTTGGTTTATCTTCCTGACTTCTTACC
4561 TTTAACATCCCTGTTAAAGATTACACTGTTGTTGTTTCAAAAAAAAAAAAAAAAAAACCTTAATTGGCAAAACATTAAGG
4641 GACTTGAATAGAATTACACTTATCTTTTTGTGCTGATTTATGTCAATCCATCATTCTGGTTATTGATGGAAGCAAATTGC
4721 TTCCTATGTTCTCTAAACCTTATGTCCCTTCCATACTCCATGAGTACCACACTGGGAGAAAACAAAAGCAAAAAGATTGT
4801 GGGAAAAGTATAGCCATTATCTTTGAGGAAATGTGTACCAAGGCACAATCATTAAAAGGAGTTGGAGGCATCATTTGGTT
4881 GACACTGTTGTCATTCTTGTTCTGATCATTTTGGACCTTGAAGAAATTGGTGATTCTCTCCTAGAATTAGACAAACAAAG
4961 TGTGTTTGGAAATAATGATTGTTTTCCTGCCTTAAAAAATATATTAACAGAAAGCTTTTATAACAGGCTGTTTCCCTCTG
5041 GACAGGTATTAATTCTGAGTAAGAATTTTCAGTGACTACATAAGGATTTGTGTAACTTATGAAGGAAGAGTCCATTTCTA
5121 ATCAAATAATTCGCCTGTTTTACTAGCTTATAGTGATCTGATTTCAGAATTTTCCTGTATCTTTTTTACATACATCAGAA
5201 AAAGAAATGTTTACTATATTTTTGGTTCCATTTATGATTGTATTAAGCATTTGACTATAAGGAAAACTAACAATTAAATC
5281 AATTAGAAAAGCAACATAAAATTAAATGATATTTAGGAAATCAGTTATATGTGAGCTTGGGTATTCAAATGTCACAAATA
5361 AAAAGCATATAACCATTAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ccUUUG-UCCUUUUUUGUaa 5'
            | || :|||:||||||  
Target 5' ccACACTGGGAGAAAACAaa 3'
 4767 - 4786 141.00 -10.70
2 
miRNA  3' ccuuuGUCCU----UUUUUGUAa 5'
               |||||     ||||:|| 
Target 5' aggccCAGGATCCCCAAAATATt 3'
 3385 - 3407 132.00 -9.00
3 
miRNA  3' ccUUUGUC-CUUUUUUGUAa 5'
            ||||||  | |||::|| 
Target 5' atAAACAGATACAAAGTATt 3'
 3721 - 3740 129.00 -6.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30185266 5 COSMIC
COSN30184694 9 COSMIC
COSN30478036 9 COSMIC
COSN30454233 20 COSMIC
COSN1377276 22 COSMIC
COSN26984854 33 COSMIC
COSN14679320 71 COSMIC
COSN30161984 72 COSMIC
COSN31610782 143 COSMIC
COSN30172929 212 COSMIC
COSN20076791 320 COSMIC
COSN31590911 479 COSMIC
COSN21427654 565 COSMIC
COSN16308675 612 COSMIC
COSN28787737 793 COSMIC
COSN30175941 863 COSMIC
COSN8520437 899 COSMIC
COSN28668745 963 COSMIC
COSN8520436 974 COSMIC
COSN7564457 1071 COSMIC
COSN27373902 1206 COSMIC
COSN30172300 1556 COSMIC
COSN24303019 1740 COSMIC
COSN31577036 1741 COSMIC
COSN23813353 2182 COSMIC
COSN27419472 2184 COSMIC
COSN32057346 2184 COSMIC
COSN20106102 2185 COSMIC
COSN9462708 2507 COSMIC
COSN14775451 2753 COSMIC
COSN9281301 2862 COSMIC
COSN16033856 2935 COSMIC
COSN21511158 3699 COSMIC
COSN32056830 4275 COSMIC
COSN2318758 4341 COSMIC
COSN20626636 4360 COSMIC
COSN27039664 4412 COSMIC
COSN14764516 4525 COSMIC
COSN20106101 4587 COSMIC
COSN20091905 4594 COSMIC
COSN20106098 4598 COSMIC
COSN2318757 4598 COSMIC
COSN27192875 4598 COSMIC
COSN20106099 4599 COSMIC
COSN20106100 4599 COSMIC
COSN28246087 5040 COSMIC
COSN18956360 5155 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1436660606 2 dbSNP
rs371091836 3 dbSNP
rs377467078 5 dbSNP
rs766593518 8 dbSNP
rs1445733072 10 dbSNP
rs1400710590 11 dbSNP
rs1200851497 13 dbSNP
rs767171147 18 dbSNP
rs757254079 19 dbSNP
rs1424377916 20 dbSNP
rs1173229251 24 dbSNP
rs751386695 25 dbSNP
rs201496531 29 dbSNP
rs775753898 33 dbSNP
rs1051288608 36 dbSNP
rs765413541 38 dbSNP
rs1208475551 39 dbSNP
rs1268356556 40 dbSNP
rs1442349344 42 dbSNP
rs759942373 45 dbSNP
rs1219285450 47 dbSNP
rs1240560566 48 dbSNP
rs1349471732 49 dbSNP
rs1317154088 51 dbSNP
rs533794383 55 dbSNP
rs1264759860 56 dbSNP
rs1321034304 58 dbSNP
rs3739530 71 dbSNP
rs186229664 74 dbSNP
rs559554236 77 dbSNP
rs1448250831 89 dbSNP
rs1190329141 92 dbSNP
rs974281886 95 dbSNP
rs1481040114 98 dbSNP
rs1202103622 109 dbSNP
rs536030982 115 dbSNP
rs1427597808 117 dbSNP
rs962954953 120 dbSNP
rs951304236 125 dbSNP
rs1387340717 127 dbSNP
rs1399029248 134 dbSNP
rs542715696 135 dbSNP
rs1339827896 137 dbSNP
rs577173619 139 dbSNP
rs1197410897 149 dbSNP
rs1232198777 151 dbSNP
rs1342627039 151 dbSNP
rs1255248492 154 dbSNP
rs1035088155 160 dbSNP
rs1282912146 167 dbSNP
rs2145928 169 dbSNP
rs1490667056 172 dbSNP
rs974073805 174 dbSNP
rs550772128 182 dbSNP
rs773051698 205 dbSNP
rs958747375 210 dbSNP
rs1480321935 216 dbSNP
rs181248911 218 dbSNP
rs1365834699 219 dbSNP
rs749224472 220 dbSNP
rs369434254 222 dbSNP
rs879726904 242 dbSNP
rs1426586768 245 dbSNP
rs1304906876 246 dbSNP
rs780059990 249 dbSNP
rs755903979 252 dbSNP
rs1307420536 253 dbSNP
rs1337208426 255 dbSNP
rs1020902376 263 dbSNP
rs1236391392 266 dbSNP
rs1335768478 282 dbSNP
rs1010481825 293 dbSNP
rs893427817 296 dbSNP
rs890802771 300 dbSNP
rs1247456221 306 dbSNP
rs570931952 315 dbSNP
rs1053344855 317 dbSNP
rs1050835569 320 dbSNP
rs936348989 328 dbSNP
rs190037238 346 dbSNP
rs1402113728 352 dbSNP
rs186377252 358 dbSNP
rs943807438 360 dbSNP
rs1471147799 361 dbSNP
rs912382998 366 dbSNP
rs751845692 367 dbSNP
rs1446538425 369 dbSNP
rs1161683263 381 dbSNP
rs1383383560 382 dbSNP
rs899991780 387 dbSNP
rs983061868 390 dbSNP
rs1365548542 393 dbSNP
rs929841108 397 dbSNP
rs1185487858 400 dbSNP
rs1038542316 401 dbSNP
rs148864929 405 dbSNP
rs941606994 406 dbSNP
rs548933400 426 dbSNP
rs1247619664 430 dbSNP
rs530296717 431 dbSNP
rs919851218 432 dbSNP
rs983457051 435 dbSNP
rs1253557750 437 dbSNP
rs563044495 441 dbSNP
rs1337883822 445 dbSNP
rs958713548 446 dbSNP
rs927309912 449 dbSNP
rs1198347425 451 dbSNP
rs180734589 456 dbSNP
rs1440692012 463 dbSNP
rs1243985892 474 dbSNP
rs1462824832 476 dbSNP
rs1181873348 478 dbSNP
rs939339130 481 dbSNP
rs981537123 491 dbSNP
rs971924210 493 dbSNP
rs867305597 509 dbSNP
rs1171083768 510 dbSNP
rs544806961 511 dbSNP
rs1460279058 518 dbSNP
rs1020448087 520 dbSNP
rs980862411 521 dbSNP
rs1010823335 525 dbSNP
rs1406436366 529 dbSNP
rs576823488 531 dbSNP
rs1885380 554 dbSNP
rs1022798399 556 dbSNP
rs1033237163 562 dbSNP
rs1000461278 566 dbSNP
rs1382251376 568 dbSNP
rs1227336569 569 dbSNP
rs1298395080 573 dbSNP
rs1325133134 574 dbSNP
rs1218486627 577 dbSNP
rs989950996 581 dbSNP
rs1325970736 590 dbSNP
rs957192195 594 dbSNP
rs899487955 598 dbSNP
rs758439831 599 dbSNP
rs1007968618 600 dbSNP
rs1031566552 604 dbSNP
rs1486242233 609 dbSNP
rs775605810 614 dbSNP
rs1340452241 627 dbSNP
rs1316284068 631 dbSNP
rs1263849326 633 dbSNP
rs999189924 634 dbSNP
rs539847045 640 dbSNP
rs1386823059 644 dbSNP
rs1470811520 648 dbSNP
rs556962751 649 dbSNP
rs1401559029 658 dbSNP
rs996606899 661 dbSNP
rs1290116152 664 dbSNP
rs899626843 673 dbSNP
rs567004132 686 dbSNP
rs1387406561 687 dbSNP
rs1038092477 689 dbSNP
rs1284439275 694 dbSNP
rs772290011 699 dbSNP
rs1347801829 708 dbSNP
rs1222002903 710 dbSNP
rs890874376 717 dbSNP
rs941508768 719 dbSNP
rs1046861497 727 dbSNP
rs1259015751 728 dbSNP
rs752866100 743 dbSNP
rs189257225 745 dbSNP
rs1481304053 746 dbSNP
rs765213657 749 dbSNP
rs1340607681 750 dbSNP
rs554429505 759 dbSNP
rs937270310 766 dbSNP
rs536111906 768 dbSNP
rs927310016 771 dbSNP
rs1447263477 772 dbSNP
rs1418504673 779 dbSNP
rs555069557 785 dbSNP
rs533717181 787 dbSNP
rs777121119 792 dbSNP
rs1984008 793 dbSNP
rs760976385 801 dbSNP
rs1354990817 804 dbSNP
rs988908381 806 dbSNP
rs1293289566 824 dbSNP
rs957552914 828 dbSNP
rs1225650938 833 dbSNP
rs1248729873 840 dbSNP
rs369951588 841 dbSNP
rs779046059 848 dbSNP
rs1363622054 852 dbSNP
rs1033163592 853 dbSNP
rs989580085 865 dbSNP
rs551345542 868 dbSNP
rs1219182829 869 dbSNP
rs965365545 874 dbSNP
rs1328451011 879 dbSNP
rs538827120 889 dbSNP
rs1480811552 895 dbSNP
rs771793246 897 dbSNP
rs1017901945 906 dbSNP
rs1378034239 911 dbSNP
rs570853774 913 dbSNP
rs761349583 918 dbSNP
rs1387695631 921 dbSNP
rs1029321793 928 dbSNP
rs1404850133 930 dbSNP
rs1444753690 935 dbSNP
rs145584801 937 dbSNP
rs534168060 949 dbSNP
rs1165534051 951 dbSNP
rs533258076 958 dbSNP
rs1984007 963 dbSNP
rs993943826 978 dbSNP
rs1016610078 979 dbSNP
rs1307870054 982 dbSNP
rs1206269839 984 dbSNP
rs1236050458 987 dbSNP
rs1457030680 991 dbSNP
rs1005288110 992 dbSNP
rs749240804 993 dbSNP
rs898321375 999 dbSNP
rs780083144 1000 dbSNP
rs769734897 1001 dbSNP
rs1475590010 1015 dbSNP
rs371656903 1017 dbSNP
rs1047719295 1019 dbSNP
rs1470414868 1020 dbSNP
rs1038245702 1026 dbSNP
rs1338832640 1031 dbSNP
rs184622718 1041 dbSNP
rs905777010 1042 dbSNP
rs906746791 1044 dbSNP
rs1283528704 1046 dbSNP
rs1490047343 1049 dbSNP
rs1216168396 1051 dbSNP
rs1255892569 1059 dbSNP
rs530384572 1064 dbSNP
rs1316962799 1065 dbSNP
rs1203938437 1070 dbSNP
rs1291939816 1071 dbSNP
rs1440209687 1072 dbSNP
rs1186144660 1074 dbSNP
rs1243269413 1076 dbSNP
rs1045324894 1078 dbSNP
rs778355579 1082 dbSNP
rs1192018579 1086 dbSNP
rs371925495 1090 dbSNP
rs1224059448 1091 dbSNP
rs1480947743 1091 dbSNP
rs780819275 1100 dbSNP
rs563206369 1114 dbSNP
rs1414041767 1119 dbSNP
rs550850864 1129 dbSNP
rs796855436 1133 dbSNP
rs1401744762 1138 dbSNP
rs1341829947 1144 dbSNP
rs1339629873 1145 dbSNP
rs531768187 1148 dbSNP
rs1223825250 1150 dbSNP
rs1276261759 1155 dbSNP
rs1342418073 1174 dbSNP
rs1199450588 1177 dbSNP
rs1284307647 1179 dbSNP
rs1053856920 1190 dbSNP
rs988837059 1198 dbSNP
rs936115641 1199 dbSNP
rs10116870 1200 dbSNP
rs974920583 1205 dbSNP
rs1305076084 1215 dbSNP
rs1408057936 1216 dbSNP
rs1202027704 1227 dbSNP
rs564822045 1231 dbSNP
rs139643998 1235 dbSNP
rs1019628783 1239 dbSNP
rs1169604118 1255 dbSNP
rs986459779 1268 dbSNP
rs955196493 1269 dbSNP
rs1421312653 1274 dbSNP
rs1325272222 1282 dbSNP
rs192633370 1283 dbSNP
rs560511422 1284 dbSNP
rs1170577040 1286 dbSNP
rs1329032701 1289 dbSNP
rs1025345233 1290 dbSNP
rs779119555 1292 dbSNP
rs1279717386 1297 dbSNP
rs993912424 1302 dbSNP
rs543124335 1308 dbSNP
rs527843221 1310 dbSNP
rs1490655886 1314 dbSNP
rs1016738968 1317 dbSNP
rs1201015192 1331 dbSNP
rs1481765001 1332 dbSNP
rs1232817184 1333 dbSNP
rs1437918338 1333 dbSNP
rs963668789 1335 dbSNP
rs1205771768 1336 dbSNP
rs1379685889 1339 dbSNP
rs1016579087 1340 dbSNP
rs199768818 1341 dbSNP
rs554401573 1341 dbSNP
rs571000252 1341 dbSNP
rs754361996 1347 dbSNP
rs1004083141 1348 dbSNP
rs1329149277 1350 dbSNP
rs906723455 1352 dbSNP
rs1444028420 1355 dbSNP
rs1045693887 1357 dbSNP
rs1360855448 1361 dbSNP
rs766828298 1378 dbSNP
rs1218976486 1379 dbSNP
rs1324599327 1381 dbSNP
rs905749030 1381 dbSNP
rs1285377265 1383 dbSNP
rs1226683850 1384 dbSNP
rs1264163599 1385 dbSNP
rs893792098 1386 dbSNP
rs1196690852 1387 dbSNP
rs1046076179 1389 dbSNP
rs950019385 1401 dbSNP
rs552947259 1404 dbSNP
rs113066207 1405 dbSNP
rs1356200480 1406 dbSNP
rs1243796316 1408 dbSNP
rs936084284 1410 dbSNP
rs761136164 1414 dbSNP
rs926048125 1415 dbSNP
rs1189569213 1416 dbSNP
rs935394738 1418 dbSNP
rs1457273450 1431 dbSNP
rs1168281659 1433 dbSNP
rs923986023 1434 dbSNP
rs1463716451 1447 dbSNP
rs1330213113 1456 dbSNP
rs1051859957 1459 dbSNP
rs1429580180 1462 dbSNP
rs974853635 1469 dbSNP
rs750844241 1473 dbSNP
rs912087606 1474 dbSNP
rs188893010 1475 dbSNP
rs544865712 1479 dbSNP
rs951033356 1484 dbSNP
rs1481930674 1494 dbSNP
rs1316344467 1497 dbSNP
rs1198272376 1501 dbSNP
rs577801764 1504 dbSNP
rs1263941976 1510 dbSNP
rs1484277398 1513 dbSNP
rs975283460 1514 dbSNP
rs1025313952 1522 dbSNP
rs1423146064 1528 dbSNP
rs143228800 1530 dbSNP
rs962419082 1539 dbSNP
rs1169524310 1542 dbSNP
rs1406282083 1550 dbSNP
rs1467186063 1552 dbSNP
rs1462016512 1554 dbSNP
rs1402168298 1556 dbSNP
rs1383244941 1563 dbSNP
rs558759957 1564 dbSNP
rs1016704438 1575 dbSNP
rs1280593077 1581 dbSNP
rs1265234221 1595 dbSNP
rs1206995467 1597 dbSNP
rs1218329533 1603 dbSNP
rs1001349211 1606 dbSNP
rs951084775 1609 dbSNP
rs1208165233 1614 dbSNP
rs905671324 1615 dbSNP
rs1307876658 1616 dbSNP
rs865806550 1620 dbSNP
rs3739531 1621 dbSNP
rs1487193895 1626 dbSNP
rs566987356 1627 dbSNP
rs1434510976 1628 dbSNP
rs891752867 1633 dbSNP
rs796666491 1636 dbSNP
rs1453801299 1637 dbSNP
rs1000167056 1645 dbSNP
rs1012503670 1646 dbSNP
rs1451656743 1654 dbSNP
rs894097473 1656 dbSNP
rs1406473186 1661 dbSNP
rs1338444714 1663 dbSNP
rs1370071241 1664 dbSNP
rs1217715927 1680 dbSNP
rs554961540 1682 dbSNP
rs999895001 1685 dbSNP
rs147224411 1691 dbSNP
rs1242335175 1695 dbSNP
rs902530959 1697 dbSNP
rs3739532 1699 dbSNP
rs1159261158 1700 dbSNP
rs184494172 1701 dbSNP
rs1420305005 1711 dbSNP
rs1489311280 1712 dbSNP
rs577910084 1715 dbSNP
rs1189126010 1721 dbSNP
rs1052269334 1723 dbSNP
rs762505244 1726 dbSNP
rs571841483 1733 dbSNP
rs912041947 1735 dbSNP
rs1051980208 1739 dbSNP
rs929510326 1744 dbSNP
rs1166048559 1749 dbSNP
rs1352018170 1753 dbSNP
rs1445631558 1754 dbSNP
rs1245415682 1765 dbSNP
rs919519423 1768 dbSNP
rs1374311871 1772 dbSNP
rs144990824 1776 dbSNP
rs942543141 1788 dbSNP
rs909761802 1790 dbSNP
rs528132839 1797 dbSNP
rs1239363353 1815 dbSNP
rs1485685880 1817 dbSNP
rs1261504528 1829 dbSNP
rs1323287666 1830 dbSNP
rs1218062716 1831 dbSNP
rs1219033937 1833 dbSNP
rs1264548370 1839 dbSNP
rs1319959319 1843 dbSNP
rs1457913609 1843 dbSNP
rs1180027627 1851 dbSNP
rs560650604 1853 dbSNP
rs962386641 1855 dbSNP
rs1182956936 1860 dbSNP
rs1416517541 1867 dbSNP
rs909570944 1870 dbSNP
rs1245231240 1872 dbSNP
rs984018641 1875 dbSNP
rs929600238 1876 dbSNP
rs1467357310 1880 dbSNP
rs980244046 1880 dbSNP
rs1376292011 1887 dbSNP
rs775600105 1888 dbSNP
rs1453378473 1889 dbSNP
rs1284720993 1891 dbSNP
rs982252765 1892 dbSNP
rs375178135 1893 dbSNP
rs1226459703 1901 dbSNP
rs542210357 1919 dbSNP
rs970544401 1927 dbSNP
rs1024555333 1932 dbSNP
rs1200178536 1933 dbSNP
rs1255693154 1934 dbSNP
rs1380290859 1940 dbSNP
rs1023802421 1952 dbSNP
rs1239788676 1953 dbSNP
rs1472078683 1954 dbSNP
rs1360864849 1959 dbSNP
rs990953623 1962 dbSNP
rs1478983389 1964 dbSNP
rs1289046554 1970 dbSNP
rs1454900258 1972 dbSNP
rs192912657 1982 dbSNP
rs139465394 1983 dbSNP
rs1032572152 1985 dbSNP
rs147366109 1987 dbSNP
rs1031568800 1992 dbSNP
rs1425923293 1993 dbSNP
rs1360877800 1994 dbSNP
rs1000093339 1996 dbSNP
rs904520155 2008 dbSNP
rs1039070059 2009 dbSNP
rs1008056295 2029 dbSNP
rs1275977644 2035 dbSNP
rs1428236711 2036 dbSNP
rs1219347881 2038 dbSNP
rs377239679 2041 dbSNP
rs545313959 2050 dbSNP
rs1262730168 2058 dbSNP
rs890550062 2060 dbSNP
rs1440148070 2065 dbSNP
rs998000488 2072 dbSNP
rs1264441487 2076 dbSNP
rs900559655 2078 dbSNP
rs188109044 2094 dbSNP
rs1052332307 2096 dbSNP
rs1490719535 2101 dbSNP
rs1039096663 2102 dbSNP
rs1423259776 2102 dbSNP
rs929471497 2111 dbSNP
rs919483695 2121 dbSNP
rs1223282183 2125 dbSNP
rs116784072 2133 dbSNP
rs888291012 2134 dbSNP
rs1293794227 2144 dbSNP
rs1401684865 2145 dbSNP
rs1296084908 2154 dbSNP
rs541239218 2159 dbSNP
rs1436776526 2160 dbSNP
rs909540140 2161 dbSNP
rs918246794 2164 dbSNP
rs1295863216 2176 dbSNP
rs1383618794 2181 dbSNP
rs10967891 2184 dbSNP
rs1302031984 2185 dbSNP
rs866440182 2185 dbSNP
rs1201292994 2186 dbSNP
rs1405001912 2189 dbSNP
rs1245147075 2196 dbSNP
rs1156712450 2198 dbSNP
rs1421420866 2198 dbSNP
rs377008877 2198 dbSNP
rs751296673 2198 dbSNP
rs765124517 2198 dbSNP
rs1368022835 2199 dbSNP
rs1167213370 2201 dbSNP
rs1461798530 2202 dbSNP
rs1405671834 2207 dbSNP
rs916295043 2218 dbSNP
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rs1439604098 2224 dbSNP
rs536641380 2226 dbSNP
rs1172987965 2232 dbSNP
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rs1288074032 2245 dbSNP
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rs77050811 2371 dbSNP
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rs1485257868 2506 dbSNP
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rs978250220 2595 dbSNP
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rs573321310 2644 dbSNP
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rs1489239572 2678 dbSNP
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rs1284250879 2686 dbSNP
rs1251856886 2691 dbSNP
rs1462416011 2701 dbSNP
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rs62546174 2753 dbSNP
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rs1323233314 2783 dbSNP
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rs1199981522 2793 dbSNP
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rs1231716986 2801 dbSNP
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rs1422714948 2874 dbSNP
rs1006400970 2875 dbSNP
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rs763801962 2990 dbSNP
rs947261202 2998 dbSNP
rs1340849027 3004 dbSNP
rs910398886 3013 dbSNP
rs986050745 3022 dbSNP
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rs954819919 3027 dbSNP
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rs1281429893 3034 dbSNP
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rs879408577 3037 dbSNP
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rs200530768 3074 dbSNP
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rs775190435 3135 dbSNP
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rs910375302 3155 dbSNP
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rs62546173 3158 dbSNP
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rs1425295622 3170 dbSNP
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rs1327448795 3186 dbSNP
rs191199804 3194 dbSNP
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rs1310703313 3202 dbSNP
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rs919280944 3211 dbSNP
rs1357449527 3216 dbSNP
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rs1341764813 3340 dbSNP
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rs1049288909 3410 dbSNP
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rs138220020 3499 dbSNP
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rs577649096 3680 dbSNP
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rs1213771021 3717 dbSNP
rs887702286 3718 dbSNP
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rs1555453 3805 dbSNP
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rs1345385788 3907 dbSNP
rs1037008005 3914 dbSNP
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rs186398649 3990 dbSNP
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rs1387298767 4000 dbSNP
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rs1369384346 4011 dbSNP
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rs913764930 4025 dbSNP
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rs924033801 4030 dbSNP
rs944665617 4041 dbSNP
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rs1254869406 4046 dbSNP
rs1401251193 4057 dbSNP
rs189381378 4060 dbSNP
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rs1015130743 4077 dbSNP
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rs1014504454 4092 dbSNP
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rs930352498 4664 dbSNP
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rs1209627110 4700 dbSNP
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rs765209310 4775 dbSNP
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rs1020878654 4797 dbSNP
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rs1218880801 4805 dbSNP
rs181858110 4808 dbSNP
rs139450117 4810 dbSNP
rs1206870916 4815 dbSNP
rs1246170130 4818 dbSNP
rs893860297 4821 dbSNP
rs1464405604 4832 dbSNP
rs1028391022 4835 dbSNP
rs758916612 4842 dbSNP
rs1248255606 4846 dbSNP
rs1187888547 4849 dbSNP
rs1476910593 4850 dbSNP
rs879015061 4851 dbSNP
rs10967890 4854 dbSNP
rs1408221522 4859 dbSNP
rs901336567 4862 dbSNP
rs1156340832 4869 dbSNP
rs1387220563 4870 dbSNP
rs1462434803 4877 dbSNP
rs1326048590 4879 dbSNP
rs1377545196 4881 dbSNP
rs1010199395 4888 dbSNP
rs1436205272 4890 dbSNP
rs1280401680 4891 dbSNP
rs533211836 4899 dbSNP
rs568737634 4900 dbSNP
rs1224604092 4905 dbSNP
rs1267621071 4913 dbSNP
rs1335485481 4920 dbSNP
rs1019642498 4924 dbSNP
rs1291929598 4926 dbSNP
rs1449692313 4927 dbSNP
rs940214100 4928 dbSNP
rs559424812 4932 dbSNP
rs1233191437 4937 dbSNP
rs887362330 4938 dbSNP
rs1473384616 4940 dbSNP
rs12348286 4944 dbSNP
rs1047818447 4952 dbSNP
rs867179550 4957 dbSNP
rs1050253206 4960 dbSNP
rs374531950 4960 dbSNP
rs1165580746 4964 dbSNP
rs930342883 4969 dbSNP
rs541024189 4975 dbSNP
rs899041587 4976 dbSNP
rs766264196 4980 dbSNP
rs1372757519 4984 dbSNP
rs1408248030 5000 dbSNP
rs529289408 5001 dbSNP
rs1038038932 5006 dbSNP
rs920277466 5019 dbSNP
rs1247042548 5020 dbSNP
rs1359093014 5022 dbSNP
rs10967889 5027 dbSNP
rs1056886955 5029 dbSNP
rs937792768 5030 dbSNP
rs1317782517 5031 dbSNP
rs927438176 5047 dbSNP
rs1483882949 5049 dbSNP
rs1202661588 5052 dbSNP
rs1250613958 5057 dbSNP
rs927798168 5058 dbSNP
rs1400637047 5065 dbSNP
rs1475273097 5072 dbSNP
rs980233479 5079 dbSNP
rs969295611 5080 dbSNP
rs867702734 5100 dbSNP
rs981919000 5107 dbSNP
rs914800418 5108 dbSNP
rs989496004 5110 dbSNP
rs966571238 5111 dbSNP
rs1428216479 5112 dbSNP
rs147782374 5116 dbSNP
rs1376266360 5118 dbSNP
rs1397953072 5122 dbSNP
rs1412885373 5129 dbSNP
rs7049080 5133 dbSNP
rs1008255987 5142 dbSNP
rs1370939110 5145 dbSNP
rs1192343164 5152 dbSNP
rs1298232074 5153 dbSNP
rs1477826579 5157 dbSNP
rs1344138547 5165 dbSNP
rs958053004 5166 dbSNP
rs1028365854 5167 dbSNP
rs1028777934 5168 dbSNP
rs996941048 5175 dbSNP
rs749516065 5185 dbSNP
rs1201779257 5189 dbSNP
rs1220973522 5190 dbSNP
rs1441323607 5200 dbSNP
rs1194602986 5203 dbSNP
rs1250410692 5216 dbSNP
rs1448095536 5224 dbSNP
rs775630906 5225 dbSNP
rs558038324 5228 dbSNP
rs1004395928 5235 dbSNP
rs546431723 5236 dbSNP
rs1490327198 5240 dbSNP
rs1467775840 5247 dbSNP
rs1170974836 5248 dbSNP
rs1291084327 5251 dbSNP
rs1382846888 5253 dbSNP
rs899008692 5255 dbSNP
rs1367244977 5257 dbSNP
rs553580365 5262 dbSNP
rs1037612890 5268 dbSNP
rs1296639088 5273 dbSNP
rs1005233856 5274 dbSNP
rs561726593 5278 dbSNP
rs1234978908 5283 dbSNP
rs1253878333 5284 dbSNP
rs887331442 5291 dbSNP
rs1048620448 5294 dbSNP
rs938336366 5296 dbSNP
rs905573423 5309 dbSNP
rs931584382 5327 dbSNP
rs1211977026 5330 dbSNP
rs898822618 5339 dbSNP
rs113158798 5343 dbSNP
rs373210671 5351 dbSNP
rs989074209 5356 dbSNP
rs934941395 5373 dbSNP
rs912821002 5374 dbSNP
rs553946570 5376 dbSNP
rs986721327 5378 dbSNP
rs535424842 5379 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000262244.5 | 3UTR | UUGGCAAAACAUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000262244.5 | 3UTR | UUGGCAAAACAUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
107 hsa-miR-4307 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT091681 RARB retinoic acid receptor beta 2 6
MIRT097311 AGGF1 angiogenic factor with G-patch and FHA domains 1 2 2
MIRT099878 SOX4 SRY-box 4 2 2
MIRT114514 ARF6 ADP ribosylation factor 6 2 2
MIRT163479 WNT5A Wnt family member 5A 2 2
MIRT186633 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT194921 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT230189 AKAP17A A-kinase anchoring protein 17A 2 2
MIRT281397 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT328018 RLIM ring finger protein, LIM domain interacting 2 2
MIRT354896 SEC62 SEC62 homolog, preprotein translocation factor 2 2
MIRT361422 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT442526 MOB3B MOB kinase activator 3B 2 2
MIRT442629 NUDT12 nudix hydrolase 12 2 2
MIRT442685 SLC39A9 solute carrier family 39 member 9 2 2
MIRT444131 BRCA2 BRCA2, DNA repair associated 2 2
MIRT444174 RBM7 RNA binding motif protein 7 2 2
MIRT446045 TPR translocated promoter region, nuclear basket protein 2 2
MIRT447984 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT460527 S100A11 S100 calcium binding protein A11 2 4
MIRT466861 STX6 syntaxin 6 2 2
MIRT468806 SAP18 Sin3A associated protein 18 2 6
MIRT480269 C8orf4 chromosome 8 open reading frame 4 2 2
MIRT493119 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT499168 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 8
MIRT500507 ZBTB34 zinc finger and BTB domain containing 34 2 2
MIRT503021 CAND1 cullin associated and neddylation dissociated 1 2 2
MIRT505314 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT506123 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT509346 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 4
MIRT509446 POU2F2 POU class 2 homeobox 2 2 6
MIRT509598 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT516008 GPN2 GPN-loop GTPase 2 2 2
MIRT516120 SRPX2 sushi repeat containing protein, X-linked 2 2 4
MIRT522126 NELL2 neural EGFL like 2 2 2
MIRT523018 IL1RAPL1 interleukin 1 receptor accessory protein like 1 2 4
MIRT524015 DONSON downstream neighbor of SON 2 2
MIRT526307 JAKMIP2 janus kinase and microtubule interacting protein 2 2 2
MIRT526789 SGCD sarcoglycan delta 2 2
MIRT529141 CLCC1 chloride channel CLIC like 1 2 2
MIRT531336 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT531573 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT531831 MTPAP mitochondrial poly(A) polymerase 2 2
MIRT534994 PRR11 proline rich 11 2 6
MIRT535419 PDZD8 PDZ domain containing 8 2 2
MIRT535534 PAK2 p21 (RAC1) activated kinase 2 2 2
MIRT536649 INIP INTS3 and NABP interacting protein 2 2
MIRT543498 MDM2 MDM2 proto-oncogene 2 4
MIRT545392 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545881 ZNF200 zinc finger protein 200 2 4
MIRT547931 HNRNPR heterogeneous nuclear ribonucleoprotein R 2 2
MIRT548109 GDAP2 ganglioside induced differentiation associated protein 2 2 2
MIRT549370 ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 2 2
MIRT549934 RPL7L1 ribosomal protein L7 like 1 2 4
MIRT550455 MYADM myeloid associated differentiation marker 2 4
MIRT550640 AR androgen receptor 2 2
MIRT550815 FAM229B family with sequence similarity 229 member B 2 2
MIRT551258 OPCML opioid binding protein/cell adhesion molecule like 2 2
MIRT551768 MED21 mediator complex subunit 21 2 2
MIRT552214 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT555472 POGZ pogo transposable element derived with ZNF domain 2 2
MIRT556008 MZT1 mitotic spindle organizing protein 1 2 2
MIRT557878 FEM1B fem-1 homolog B 2 4
MIRT558486 DBN1 drebrin 1 2 2
MIRT560859 GAL3ST3 galactose-3-O-sulfotransferase 3 2 2
MIRT561521 AZF1 azoospermia factor 1 2 2
MIRT562090 KIAA0895 KIAA0895 2 2
MIRT563065 ZNF28 zinc finger protein 28 2 2
MIRT563487 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT564286 CTCF CCCTC-binding factor 2 2
MIRT565627 SLC16A1 solute carrier family 16 member 1 2 2
MIRT566508 PAWR pro-apoptotic WT1 regulator 2 2
MIRT566978 LBR lamin B receptor 2 2
MIRT567180 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT568432 GDNF glial cell derived neurotrophic factor 2 2
MIRT570092 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 2
MIRT570565 PABPC1 poly(A) binding protein cytoplasmic 1 2 2
MIRT571385 JKAMP JNK1/MAPK8-associated membrane protein 2 2
MIRT572053 GPATCH8 G-patch domain containing 8 2 2
MIRT572333 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT574528 PEG10 paternally expressed 10 2 2
MIRT575818 Igfbp4 insulin-like growth factor binding protein 4 2 2
MIRT608587 PPP2R1B protein phosphatase 2 scaffold subunit Abeta 2 4
MIRT610442 TSPAN15 tetraspanin 15 2 2
MIRT614994 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT615014 ERGIC2 ERGIC and golgi 2 2 2
MIRT615078 CISD3 CDGSH iron sulfur domain 3 2 2
MIRT616180 SYT7 synaptotagmin 7 2 2
MIRT617191 CDH13 cadherin 13 2 2
MIRT617287 GTF2H3 general transcription factor IIH subunit 3 2 2
MIRT618714 ESD esterase D 2 2
MIRT621825 TIMM8B translocase of inner mitochondrial membrane 8 homolog B 2 2
MIRT624139 DLX3 distal-less homeobox 3 2 2
MIRT625991 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT626344 BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 2 2
MIRT634899 ZNF701 zinc finger protein 701 2 2
MIRT637848 SLC2A9 solute carrier family 2 member 9 2 2
MIRT639514 FYB FYN binding protein 1 2 2
MIRT642468 RSL1D1 ribosomal L1 domain containing 1 2 2
MIRT653670 SLC26A7 solute carrier family 26 member 7 2 2
MIRT655192 PHAX phosphorylated adaptor for RNA export 2 2
MIRT657011 KCNMB4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 2 2
MIRT661008 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT665816 TMEM161B transmembrane protein 161B 2 2
MIRT683852 ZNF208 zinc finger protein 208 2 2
MIRT700436 PURB purine rich element binding protein B 2 2
MIRT700517 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4307 Tripterygium wilfordii Hook F resistant tissue
hsa-miR-4307 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4307 Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4307 Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine sensitive cell line (Bats-72)

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