miRTarBase - #MIRT442559


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pre-miRNA Information
pre-miRNA hsa-mir-526b   
Genomic Coordinates chr19: 53694393 - 53694475
Description Homo sapiens miR-526b stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-526b-5p
Sequence 14| CUCUUGAGGGAAGCACUUUCUGU |36
Evidence Experimental
Experiments Array-cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs527640376 1 dbSNP
rs1397075062 2 dbSNP
rs1462454250 5 dbSNP
rs774071640 7 dbSNP
rs1329470722 12 dbSNP
rs1471427006 13 dbSNP
rs375077514 15 dbSNP
rs1280430663 16 dbSNP
rs370046048 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CAB39   
Synonyms CGI-66, MO25
Description calcium binding protein 39
Transcript NM_001130849   
Other Transcripts NM_001130850 , NM_016289   
Expression
Putative miRNA Targets on CAB39
3'UTR of CAB39
(miRNA target sites are highlighted)		 
>CAB39|NM_001130849|3'UTR
   1 TCTCCAATAAACATCTATGTTAAATCCAAATTCAGCATTTGCTGTTAGCTATTCAGCATCAGGCACTCTTATTGATTCAT
  81 GAGGAACATTACTGCTAATCTGCTGTTAAGTGAACGGTTTTTCATTTTACCCTTTTGTTTTTCAGTCCAGGTTGGAGATC
 161 GTAGCTGCTGCTGCTTGCACACTAGGGCACATGTGGGCTTTCTCTTGATCTTTGTGTCATTTCAGAATTCAAAGACTGTG
 241 CTACGGGAGTTCTGAACATGGCTGGGTTCATGAAGGCAAATGTATGGATGAGAGTGTGGTTTAGGAAAGAGGGCACTGAT
 321 ATCAGATTAGACCTATGTGTTTGCACCCATCTTTGTTGGCGATCTGAGTGCAGTGTGGCAAGTGCACACCTGGCATCCCT
 401 GCGTCAGATCGCGCACCTTCAGGTCGCGCACCTTCGCTGAAGGAAGATGACGCAGAGCTTTATCTGAAATCAGAGGGGAG
 481 CTATCCAAAATGGGAGTTTGGGGGCAGCTAAAGTTGACATGCGAATAAATTGATACTGAAACTTAGCAACTTCTTAAAAG
 561 TGTAAAGAAGCCTCATAAGATCATAAGGAAAATGTATATATGCTTTTCACAGCTTTCTAGAATTTTTTGACATTTGATTT
 641 TCTTGAGACTTGTAAACCTGGATATGTTGAAGGGTATTTGTTAATTTTACTTTTCAAAGATACTTTAAAACAGTAGAGCT
 721 AGCAATGACACCTTGCATTTCATTTCAACACTGCTTCAAGGTTTCTTTTGTATATAATTCTTAGAATGCTCATTTCTTTT
 801 AAATGGTTTAATTTGTACAGCAGAGGAATGTTATTGTAGTAGTATGTAACTATTACCTAATACTGAGTTTTTGCAAAAAA
 881 CAATGAATGCTCATATGTAATTGAAATACTTCAGATCACATGAAAATGCTGATTTAACATTTAAGTATCACAGCATTAAA
 961 AGAAAAAGAAAGTAAACCAGTCCTTTGTATTCAGTTACCTAATGGGGTGCCATCAATAAGCTGCGATACAGCCCTGGAGC
1041 TCAGTCAGCCACACCTTCCTGCATCCTATTGGCCTTATTCATTTTAAATGAGTTAATGAATCTGCCAGATCTGTGAATGA
1121 TAGAGATTATGCTAAATTAATGCTGATTCTTTGTGTGTGTGGGAAATCTCTGTAGAGCACCTTTTCTTTCTTAGACTAAG
1201 TAACCCAGTACAATAGTTGTGAACTGAATAATTAAAACTTTGGCTTCTCTTAGGAAAAGACGACTTCCTAGTCATAGGTG
1281 TCCTATGGGGAAATTTATTTTTTTTAATGTCCTGTTCCTTAATGCTGCAAATTATCAGTATTTATAAAGTAACTGATTTT
1361 GCACCACTTTTTTGTTACTGTGACCACGGCAGAACAATGTCTTCTAGACTATATCTATGTAAAGTTATTAGAATGGTATC
1441 TGTTCATTTTAGTGATATGAAGATCACAACTAACAACTGACAAATCAGAGTTTGCCAGTTCAAATTCAGCATGGCTGCAG
1521 CTGATTAAGAAATTGATATGATTATTCTTTGCTAGCCTCTCTTACTAATGGAATTATATACTGGCCAGTAAAATGGGCCT
1601 CCCAATTGCTGTTTCAGCAGGTTTTAAACCTTCAGGAACACCAGTTAGGAAAATAGCTCCAGAAAATATAGATATATTTT
1681 ATTTTTATTAAAATGGCAGTCTACATCATAATTGGCATTTCTCAAGACTGTCTTTACCAGAATCTGTGTGAAATAAGGCA
1761 ATCTAGTCTCCTTGAAAAAAAAATCTCTTGGATGTTTAGGAAGGAAGACTTGGCCGTGATGTGGTGTCCTGGCTTTGTGG
1841 TGTAGTGCTGTGTGTATGGAGTTAGTGTAAAAACATGGATTACACCAAGTGGAAGAAACGTCTTCTTGCCAAGCTCATTC
1921 TTAGAACTTACACATCTAGAACAGCTTCCACTTTGGCAGTGAGGTCGTAGCCTTTTAGGTGGAAGAAGTGAGGGTGCAGC
2001 GTGTCAGACACAACATTCATGTTACTCTTACATTGGAATCTGAAGGTAGTTCAGACTTCGTGGGTTTTGTTTTTAAGCAA
2081 AACAATGTGAAAACATTTAAGTTTGAAATGTTGCATTTGAAGTTATGATCATTTAATATATTCATATTACCAAGACTATT
2161 ATACTGGAAGTGGTTTTTGTGTTATAAAGGTTTAATTTTACATAAGGCAGTTACTTAATGTGATTTTTAACCCTTAAAAA
2241 AGTGGAGATGTATACATTTGTTAACAATGCCATGAAAGCATTTTCTTTCTCCTAAGGAAAAGTGAATTTCTTATCAGAAT
2321 ATCTGGCTGGCCCTGTAATTTAAATTAAAATAAAATTTTGGAGAAACAGCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugucuUUCA-CGAAGGGAGUUCUc 5'
               || | || |::||||||| 
Target 5' atcatAATTGGCATTTCTCAAGAc 3'
 1705 - 1728 158.00 -12.10
2 
miRNA  3' ugucUUUCA---CGAAGGGAGUUCUc 5'
              ||| |   |||||:||:|:|| 
Target 5' attaAAACTTTGGCTTCTCTTAGGAa 3'
 1231 - 1256 139.00 -16.30
3 
miRNA  3' ugUCUUUCACGAA---GGGAGUUCUc 5'
            || |:|| :||   ||:|||:|| 
Target 5' tcAGCAGGT-TTTAAACCTTCAGGAa 3'
 1614 - 1638 132.00 -14.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN25851892 52 COSMIC
COSN20979148 56 COSMIC
COSN20097949 70 COSMIC
COSN6174093 84 COSMIC
COSN26604450 85 COSMIC
COSN31531166 87 COSMIC
COSN31606836 205 COSMIC
COSN15889263 265 COSMIC
COSN21486844 414 COSMIC
COSN31567538 621 COSMIC
COSN26030767 687 COSMIC
COSN31490655 696 COSMIC
COSN31530532 797 COSMIC
COSN26477991 1025 COSMIC
COSN31566523 1110 COSMIC
COSN22275694 1226 COSMIC
COSN31545979 1306 COSMIC
COSN20794981 1415 COSMIC
COSN5129900 1489 COSMIC
COSN22765634 1560 COSMIC
COSN1830849 1667 COSMIC
COSN31596497 1957 COSMIC
COSN23833102 2008 COSMIC
COSN26553894 2008 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs777268279 1 dbSNP
rs746888930 7 dbSNP
rs140024311 8 dbSNP
rs377634027 12 dbSNP
rs745686119 14 dbSNP
rs1192241224 15 dbSNP
rs769658301 18 dbSNP
rs1426751453 20 dbSNP
rs1172893377 23 dbSNP
rs1355304918 25 dbSNP
rs1324967942 26 dbSNP
rs778966102 27 dbSNP
rs1016582778 28 dbSNP
rs748410922 31 dbSNP
rs1367164753 40 dbSNP
rs772223411 43 dbSNP
rs773485898 45 dbSNP
rs373497400 51 dbSNP
rs377713869 52 dbSNP
rs1431148624 55 dbSNP
rs570787578 56 dbSNP
rs1345626845 63 dbSNP
rs963201597 64 dbSNP
rs1406339852 67 dbSNP
rs16836174 69 dbSNP
rs756020786 69 dbSNP
rs1406164810 70 dbSNP
rs201481747 71 dbSNP
rs559978943 73 dbSNP
rs1412374529 74 dbSNP
rs1227879787 91 dbSNP
rs919967803 98 dbSNP
rs1450425766 106 dbSNP
rs143740984 112 dbSNP
rs1354097475 113 dbSNP
rs1047477673 116 dbSNP
rs192811843 117 dbSNP
rs1212386002 118 dbSNP
rs777154196 132 dbSNP
rs1278128090 144 dbSNP
rs185074030 151 dbSNP
rs1343960333 161 dbSNP
rs780571146 162 dbSNP
rs1434259666 164 dbSNP
rs1379865915 173 dbSNP
rs554040316 176 dbSNP
rs879355943 179 dbSNP
rs565906482 184 dbSNP
rs529013818 188 dbSNP
rs1170637172 189 dbSNP
rs573803733 192 dbSNP
rs115435589 199 dbSNP
rs6716468 203 dbSNP
rs940702180 205 dbSNP
rs1425970286 216 dbSNP
rs1037685596 219 dbSNP
rs899083825 228 dbSNP
rs1001421287 232 dbSNP
rs1206136366 237 dbSNP
rs1484191076 237 dbSNP
rs1055667643 238 dbSNP
rs11886295 239 dbSNP
rs1383775337 245 dbSNP
rs1035738160 246 dbSNP
rs1377723611 247 dbSNP
rs1014035004 248 dbSNP
rs959722981 250 dbSNP
rs1012624420 253 dbSNP
rs1307060604 260 dbSNP
rs115143121 272 dbSNP
rs967124073 278 dbSNP
rs1167449721 291 dbSNP
rs573687514 295 dbSNP
rs1413153360 296 dbSNP
rs1183044026 297 dbSNP
rs1473676262 301 dbSNP
rs1245099209 303 dbSNP
rs973200381 306 dbSNP
rs1488651414 313 dbSNP
rs1266996585 314 dbSNP
rs1219273416 315 dbSNP
rs754500586 320 dbSNP
rs1229659835 321 dbSNP
rs1236974074 321 dbSNP
rs775564148 323 dbSNP
rs1486276598 325 dbSNP
rs146820041 334 dbSNP
rs1387000631 336 dbSNP
rs1254445562 348 dbSNP
rs912666793 350 dbSNP
rs16827588 354 dbSNP
rs1295717768 356 dbSNP
rs199659622 361 dbSNP
rs954864063 362 dbSNP
rs1394442331 368 dbSNP
rs987629094 375 dbSNP
rs1473584348 379 dbSNP
rs907972332 385 dbSNP
rs1409866044 386 dbSNP
rs1434050270 389 dbSNP
rs1039718036 394 dbSNP
rs1189294036 398 dbSNP
rs921476522 403 dbSNP
rs1210530228 404 dbSNP
rs1268635861 404 dbSNP
rs971597941 404 dbSNP
rs1233510585 409 dbSNP
rs1332515283 409 dbSNP
rs564159598 409 dbSNP
rs189539235 411 dbSNP
rs1043586907 413 dbSNP
rs903366963 414 dbSNP
rs1459286928 417 dbSNP
rs371017109 425 dbSNP
rs546047346 426 dbSNP
rs761941126 427 dbSNP
rs937278342 428 dbSNP
rs767889730 429 dbSNP
rs895596587 430 dbSNP
rs1299088602 431 dbSNP
rs7596575 431 dbSNP
rs1453962797 434 dbSNP
rs1290290578 436 dbSNP
rs895678949 437 dbSNP
rs531727168 446 dbSNP
rs549942442 447 dbSNP
rs1246861166 450 dbSNP
rs115168898 451 dbSNP
rs115627254 452 dbSNP
rs994774369 454 dbSNP
rs1232090594 457 dbSNP
rs547927856 472 dbSNP
rs1026673165 477 dbSNP
rs1298886837 478 dbSNP
rs950566981 479 dbSNP
rs11555189 481 dbSNP
rs996413791 483 dbSNP
rs1396631610 487 dbSNP
rs1404461906 488 dbSNP
rs1170972299 497 dbSNP
rs1241333818 498 dbSNP
rs1019691992 499 dbSNP
rs1390549822 500 dbSNP
rs965434748 501 dbSNP
rs975349018 503 dbSNP
rs371828298 505 dbSNP
rs55790626 512 dbSNP
rs947614861 513 dbSNP
rs192785949 514 dbSNP
rs569894604 517 dbSNP
rs1188187321 518 dbSNP
rs537033309 519 dbSNP
rs140567636 521 dbSNP
rs150041626 522 dbSNP
rs934845513 523 dbSNP
rs962474744 524 dbSNP
rs1177169161 537 dbSNP
rs1249155659 542 dbSNP
rs1340510110 546 dbSNP
rs1419133061 548 dbSNP
rs1160714684 556 dbSNP
rs777331357 568 dbSNP
rs1057484775 571 dbSNP
rs1414379388 573 dbSNP
rs920616050 573 dbSNP
rs895536028 574 dbSNP
rs145313702 576 dbSNP
rs1408063998 587 dbSNP
rs779426505 588 dbSNP
rs1427523664 597 dbSNP
rs1395520682 598 dbSNP
rs991457420 601 dbSNP
rs898815060 603 dbSNP
rs917188672 609 dbSNP
rs949907236 612 dbSNP
rs1186664302 614 dbSNP
rs1374017476 621 dbSNP
rs531183203 624 dbSNP
rs374741327 625 dbSNP
rs79216152 629 dbSNP
rs183700989 632 dbSNP
rs1224360286 637 dbSNP
rs550897873 654 dbSNP
rs1008691756 658 dbSNP
rs1232712686 674 dbSNP
rs1265343685 675 dbSNP
rs1306150836 687 dbSNP
rs1019201673 690 dbSNP
rs1353700817 692 dbSNP
rs965403616 704 dbSNP
rs1481947724 707 dbSNP
rs1183703477 715 dbSNP
rs1388541394 716 dbSNP
rs1266173409 720 dbSNP
rs1457257838 724 dbSNP
rs567820961 726 dbSNP
rs772868230 728 dbSNP
rs749123068 742 dbSNP
rs114055615 749 dbSNP
rs1028385533 772 dbSNP
rs968685141 774 dbSNP
rs1232644866 775 dbSNP
rs1200077196 777 dbSNP
rs1009146982 787 dbSNP
rs979212362 793 dbSNP
rs962215494 805 dbSNP
rs770780267 806 dbSNP
rs1222265092 823 dbSNP
rs1372933046 827 dbSNP
rs769369645 830 dbSNP
rs1407970411 832 dbSNP
rs775157563 834 dbSNP
rs548701014 835 dbSNP
rs1027751673 836 dbSNP
rs1435810896 836 dbSNP
rs1390190733 842 dbSNP
rs1355023535 845 dbSNP
rs934916867 852 dbSNP
rs1399728891 858 dbSNP
rs1463474397 865 dbSNP
rs561900584 868 dbSNP
rs917442197 877 dbSNP
rs536370465 882 dbSNP
rs1251523044 883 dbSNP
rs950042569 884 dbSNP
rs977348337 885 dbSNP
rs948889545 890 dbSNP
rs1044156600 891 dbSNP
rs920377081 892 dbSNP
rs930323359 895 dbSNP
rs935863207 897 dbSNP
rs1054195598 898 dbSNP
rs1345464072 907 dbSNP
rs1047851438 913 dbSNP
rs759603520 914 dbSNP
rs1296819221 919 dbSNP
rs886323177 922 dbSNP
rs1435698222 932 dbSNP
rs1009240851 940 dbSNP
rs1309723876 948 dbSNP
rs529314739 948 dbSNP
rs547868357 951 dbSNP
rs559936306 963 dbSNP
rs1288894192 965 dbSNP
rs1359247392 966 dbSNP
rs1490036439 975 dbSNP
rs1335701973 982 dbSNP
rs1412465427 985 dbSNP
rs114917875 986 dbSNP
rs768505756 988 dbSNP
rs115825820 1000 dbSNP
rs1450603372 1007 dbSNP
rs1248088370 1008 dbSNP
rs1212498710 1009 dbSNP
rs1050754808 1014 dbSNP
rs890792439 1017 dbSNP
rs569909099 1025 dbSNP
rs1419968910 1026 dbSNP
rs1213919976 1028 dbSNP
rs1015161685 1035 dbSNP
rs371350699 1040 dbSNP
rs898041999 1041 dbSNP
rs1412511534 1047 dbSNP
rs1374514414 1048 dbSNP
rs1308291203 1049 dbSNP
rs536917387 1052 dbSNP
rs1372811114 1054 dbSNP
rs549272353 1056 dbSNP
rs958784846 1067 dbSNP
rs149227901 1069 dbSNP
rs1012997419 1072 dbSNP
rs774311181 1075 dbSNP
rs1257020806 1077 dbSNP
rs1206160543 1078 dbSNP
rs1343643676 1079 dbSNP
rs1024351498 1082 dbSNP
rs1249466898 1103 dbSNP
rs1289752522 1107 dbSNP
rs1322305424 1113 dbSNP
rs1364566410 1120 dbSNP
rs1230881460 1122 dbSNP
rs1354292322 1130 dbSNP
rs1288524508 1138 dbSNP
rs971410151 1141 dbSNP
rs56218749 1142 dbSNP
rs1244289716 1149 dbSNP
rs1375967276 1158 dbSNP
rs1296860577 1160 dbSNP
rs1461895270 1161 dbSNP
rs762036895 1163 dbSNP
rs1350937709 1166 dbSNP
rs1167560530 1172 dbSNP
rs1459891972 1173 dbSNP
rs1417260290 1176 dbSNP
rs977796528 1189 dbSNP
rs1473726725 1192 dbSNP
rs1248119137 1197 dbSNP
rs924570741 1202 dbSNP
rs957477743 1215 dbSNP
rs1291410081 1216 dbSNP
rs188170227 1217 dbSNP
rs989950774 1218 dbSNP
rs1268278457 1220 dbSNP
rs1214661400 1224 dbSNP
rs767695154 1225 dbSNP
rs116332899 1226 dbSNP
rs1305887479 1227 dbSNP
rs932445081 1233 dbSNP
rs1391128082 1239 dbSNP
rs1050786037 1242 dbSNP
rs1328431779 1243 dbSNP
rs1439419804 1261 dbSNP
rs1393818221 1262 dbSNP
rs181969255 1263 dbSNP
rs1455515601 1264 dbSNP
rs540003268 1272 dbSNP
rs1037079741 1273 dbSNP
rs1433497332 1274 dbSNP
rs1384517673 1275 dbSNP
rs898078603 1278 dbSNP
rs995052894 1279 dbSNP
rs1049292279 1288 dbSNP
rs894643979 1291 dbSNP
rs1013034620 1298 dbSNP
rs1210011939 1298 dbSNP
rs566506515 1298 dbSNP
rs1259719774 1299 dbSNP
rs538245619 1304 dbSNP
rs1233523393 1308 dbSNP
rs1024409014 1313 dbSNP
rs375317718 1322 dbSNP
rs1306169295 1324 dbSNP
rs971865332 1345 dbSNP
rs998871594 1350 dbSNP
rs1032056889 1351 dbSNP
rs1383948001 1352 dbSNP
rs1405896652 1358 dbSNP
rs1382902489 1362 dbSNP
rs1288442914 1366 dbSNP
rs369915312 1368 dbSNP
rs760986380 1369 dbSNP
rs576593370 1371 dbSNP
rs74356364 1372 dbSNP
rs1453607127 1375 dbSNP
rs1390657966 1376 dbSNP
rs199811907 1383 dbSNP
rs1195251767 1384 dbSNP
rs562374007 1388 dbSNP
rs574081626 1389 dbSNP
rs541479816 1393 dbSNP
rs1484060596 1405 dbSNP
rs747950008 1409 dbSNP
rs1209130291 1410 dbSNP
rs1384096394 1411 dbSNP
rs1298914832 1412 dbSNP
rs1455067728 1418 dbSNP
rs953865970 1425 dbSNP
rs1295007611 1429 dbSNP
rs1285399723 1431 dbSNP
rs986565795 1449 dbSNP
rs912330927 1455 dbSNP
rs1311313902 1459 dbSNP
rs1194815357 1471 dbSNP
rs1433802283 1484 dbSNP
rs186302098 1485 dbSNP
rs1036707708 1487 dbSNP
rs533491245 1487 dbSNP
rs1330842891 1496 dbSNP
rs143391728 1510 dbSNP
rs1201529000 1512 dbSNP
rs919576922 1513 dbSNP
rs1187693631 1518 dbSNP
rs754176880 1521 dbSNP
rs563301956 1523 dbSNP
rs1461665148 1530 dbSNP
rs1186801541 1539 dbSNP
rs77291838 1540 dbSNP
rs1198063366 1547 dbSNP
rs1338061235 1551 dbSNP
rs894702503 1556 dbSNP
rs1245549667 1561 dbSNP
rs1357458663 1568 dbSNP
rs1291594075 1569 dbSNP
rs11555190 1572 dbSNP
rs1469675638 1578 dbSNP
rs1414464875 1579 dbSNP
rs1350868198 1580 dbSNP
rs1159282775 1585 dbSNP
rs1414462717 1586 dbSNP
rs1468437194 1606 dbSNP
rs1330696751 1612 dbSNP
rs1176091212 1615 dbSNP
rs1407327989 1616 dbSNP
rs1163796404 1619 dbSNP
rs1013109969 1633 dbSNP
rs1186778420 1636 dbSNP
rs1472747402 1637 dbSNP
rs1184374704 1643 dbSNP
rs1327400040 1644 dbSNP
rs1436452365 1645 dbSNP
rs1046280143 1646 dbSNP
rs1250356314 1652 dbSNP
rs907293901 1656 dbSNP
rs1214866041 1666 dbSNP
rs1337031216 1669 dbSNP
rs548959598 1670 dbSNP
rs1232872962 1674 dbSNP
rs3087558 1677 dbSNP
rs34517847 1677 dbSNP
rs567269303 1682 dbSNP
rs1031713793 1688 dbSNP
rs1330132418 1697 dbSNP
rs558859519 1700 dbSNP
rs1439695090 1704 dbSNP
rs893110896 1710 dbSNP
rs1440816827 1713 dbSNP
rs1443099318 1719 dbSNP
rs1011480230 1728 dbSNP
rs1279692855 1739 dbSNP
rs1409641434 1745 dbSNP
rs1156456745 1746 dbSNP
rs1351875945 1761 dbSNP
rs1028207204 1762 dbSNP
rs953939249 1767 dbSNP
rs1470254912 1768 dbSNP
rs1213107390 1775 dbSNP
rs1251180960 1775 dbSNP
rs726379 1780 dbSNP
rs1286538400 1783 dbSNP
rs10006 1787 dbSNP
rs554357540 1791 dbSNP
rs1270785207 1793 dbSNP
rs1303956601 1798 dbSNP
rs1236379224 1813 dbSNP
rs1368647602 1814 dbSNP
rs765401731 1817 dbSNP
rs570934908 1819 dbSNP
rs972891167 1825 dbSNP
rs1399809462 1827 dbSNP
rs1182534306 1840 dbSNP
rs368813439 1853 dbSNP
rs372180332 1858 dbSNP
rs919625660 1858 dbSNP
rs1455881964 1865 dbSNP
rs1479551713 1870 dbSNP
rs1193575901 1876 dbSNP
rs1475746024 1878 dbSNP
rs1243985354 1883 dbSNP
rs1199007943 1884 dbSNP
rs1213893668 1885 dbSNP
rs73096708 1887 dbSNP
rs190242891 1888 dbSNP
rs1212691803 1891 dbSNP
rs756825649 1896 dbSNP
rs1396401505 1900 dbSNP
rs574263277 1901 dbSNP
rs181708102 1904 dbSNP
rs1359334457 1914 dbSNP
rs907363735 1916 dbSNP
rs1436911892 1917 dbSNP
rs1371889749 1919 dbSNP
rs1173561142 1927 dbSNP
rs1411076007 1935 dbSNP
rs745620022 1940 dbSNP
rs1421714201 1946 dbSNP
rs1402670184 1955 dbSNP
rs1184899815 1965 dbSNP
rs568551255 1967 dbSNP
rs934788200 1968 dbSNP
rs1190334757 1970 dbSNP
rs1053602442 1972 dbSNP
rs749877068 1973 dbSNP
rs1309223730 1999 dbSNP
rs1345819605 2001 dbSNP
rs1355561094 2002 dbSNP
rs576513447 2002 dbSNP
rs1235139581 2005 dbSNP
rs1011549080 2010 dbSNP
rs1302686089 2015 dbSNP
rs141969677 2016 dbSNP
rs1028238516 2019 dbSNP
rs755781501 2031 dbSNP
rs889706745 2052 dbSNP
rs186718372 2053 dbSNP
rs1276815270 2059 dbSNP
rs556088274 2061 dbSNP
rs1474375708 2062 dbSNP
rs777051971 2069 dbSNP
rs1489871355 2075 dbSNP
rs1177525093 2081 dbSNP
rs1221906565 2084 dbSNP
rs1019482142 2086 dbSNP
rs1203744706 2095 dbSNP
rs879624133 2095 dbSNP
rs961483825 2095 dbSNP
rs771872206 2097 dbSNP
rs972538176 2101 dbSNP
rs574422284 2102 dbSNP
rs1475996981 2105 dbSNP
rs1171064545 2116 dbSNP
rs541416442 2130 dbSNP
rs1296950396 2131 dbSNP
rs1422205038 2137 dbSNP
rs1446768913 2137 dbSNP
rs1302064436 2145 dbSNP
rs1459966453 2146 dbSNP
rs916242749 2149 dbSNP
rs1160129533 2159 dbSNP
rs948990117 2165 dbSNP
rs1405606823 2171 dbSNP
rs1176540465 2174 dbSNP
rs1468899268 2178 dbSNP
rs201178433 2180 dbSNP
rs1254302330 2194 dbSNP
rs1390925116 2207 dbSNP
rs879292256 2208 dbSNP
rs1467657154 2210 dbSNP
rs1240824576 2211 dbSNP
rs1260880683 2211 dbSNP
rs1319091937 2215 dbSNP
rs982085419 2221 dbSNP
rs1240012708 2224 dbSNP
rs1372305061 2226 dbSNP
rs1306295400 2229 dbSNP
rs928849837 2260 dbSNP
rs934839985 2261 dbSNP
rs1289663786 2286 dbSNP
rs58016278 2293 dbSNP
rs1455595485 2304 dbSNP
rs1315903837 2306 dbSNP
rs553373196 2314 dbSNP
rs1228919864 2315 dbSNP
rs761863845 2321 dbSNP
rs1454572811 2346 dbSNP
rs1396760974 2347 dbSNP
rs1299706211 2355 dbSNP
rs750604991 2368 dbSNP
rs995992389 2372 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ugucuuucaCGAAGGGAGUUCuc 5'
                   || |::||||||  
Target 5' ------uugGCAUUUCUCAAG-- 3'
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Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000258418.5 | 3UTR | UUGGCAUUUCUCAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000258418.5 | 3UTR | UUGGCAUUUCUCAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE38226 Liver fibrosis -0.677 3.7e-4 -0.056 4.0e-1 21 Click to see details
GSE28260 Renal cortex and medulla -0.733 2.2e-3 -0.655 7.6e-3 13 Click to see details
GSE21032 Prostate cancer -0.274 6.1e-3 -0.315 1.9e-3 83 Click to see details
GSE21849 B cell lymphoma -0.436 9.0e-3 -0.482 4.1e-3 29 Click to see details
GSE28544 Breast cancer -0.396 2.8e-2 -0.379 3.4e-2 24 Click to see details
GSE19783 ER+ ER+ breast cancer -0.366 5.6e-2 -0.507 1.1e-2 20 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.318 6.1e-2 0.398 2.4e-2 25 Click to see details
GSE32688 Pancreatic cancer 0.273 6.5e-2 0.173 1.7e-1 32 Click to see details
GSE19783 ER- ER- breast cancer 0.159 8.1e-2 0.167 7.1e-2 79 Click to see details
GSE17306 Multiple myeloma -0.181 1.1e-1 -0.238 5.0e-2 49 Click to see details
GSE17498 Multiple myeloma 0.178 1.4e-1 0.142 1.9e-1 40 Click to see details
GSE14794 Lymphoblastoid cells -0.094 1.9e-1 -0.078 2.3e-1 90 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.1 3.4e-1 -0.203 2.0e-1 20 Click to see details
GSE19536 Breast cancer 0.042 3.4e-1 0.005 4.8e-1 100 Click to see details
GSE42095 Differentiated embryonic stem cells 0.061 3.9e-1 -0.252 1.2e-1 23 Click to see details
GSE21687 Ependynoma primary tumors -0.028 4.1e-1 -0.054 3.4e-1 64 Click to see details
GSE26953 Aortic valvular endothelial cells -0.04 4.3e-1 0.045 4.2e-1 24 Click to see details
GSE19350 CNS germ cell tumors -0.01 4.9e-1 0.210 2.6e-1 12 Click to see details
GSE27834 Pluripotent stem cells 0.008 4.9e-1 0.129 3.2e-1 16 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.001 5.0e-1 0.128 2.7e-1 25 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.001 5.0e-1 0.128 2.7e-1 25 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
THCA 0.651 0 0.174 0.26 16 Click to see details
PRAD -0.637 0.01 -0.593 0.02 13 Click to see details
LUSC -0.737 0.01 -0.717 0.01 9 Click to see details
UCEC 0.934 0.03 1.000 0.5 4 Click to see details
STAD -0.702 0.09 -0.900 0.02 5 Click to see details
BLCA -0.423 0.15 -0.190 0.33 8 Click to see details
HNSC 0.166 0.24 0.250 0.14 20 Click to see details
LIHC -0.173 0.33 -0.417 0.13 9 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
BRCA 0.06 0.33 0.015 0.46 56 Click to see details
234 hsa-miR-526b-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT382022 FAM49B family with sequence similarity 49 member B 2 2
MIRT442559 CAB39 calcium binding protein 39 2 2
MIRT443783 ST13 ST13, Hsp70 interacting protein 2 2
MIRT443886 CNKSR3 CNKSR family member 3 2 2
MIRT443970 SSH2 slingshot protein phosphatase 2 2 2
MIRT444050 PROX2 prospero homeobox 2 2 2
MIRT444128 BRCA2 BRCA2, DNA repair associated 2 2
MIRT444144 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT444171 RBM7 RNA binding motif protein 7 2 2
MIRT444185 SCAMP1 secretory carrier membrane protein 1 2 2
MIRT444217 METTL12 methyltransferase like 12 2 2
MIRT444474 WNT5A Wnt family member 5A 2 2
MIRT444582 GPR89B G protein-coupled receptor 89B 2 2
MIRT444659 TSPAN14 tetraspanin 14 2 2
MIRT444755 LUZP1 leucine zipper protein 1 2 2
MIRT444768 ZNF90 zinc finger protein 90 2 2
MIRT444862 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT444904 KIAA1841 KIAA1841 2 2
MIRT444941 HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 2 2
MIRT444966 CDH7 cadherin 7 2 2
MIRT445008 TMEM106B transmembrane protein 106B 2 2
MIRT445014 RBMS3 RNA binding motif single stranded interacting protein 3 2 2
MIRT445036 TRPS1 transcriptional repressor GATA binding 1 2 2
MIRT445045 PURB purine rich element binding protein B 2 2
MIRT445075 CXXC4 CXXC finger protein 4 2 2
MIRT445148 KLHL23 kelch like family member 23 2 2
MIRT445228 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT445258 C9orf66 chromosome 9 open reading frame 66 2 2
MIRT445263 LOH12CR2 loss of heterozygosity, 12, chromosomal region 2 (non-protein coding) 2 4
MIRT445413 ACSL6 acyl-CoA synthetase long chain family member 6 2 2
MIRT445431 ESD esterase D 2 2
MIRT445475 KDM6A lysine demethylase 6A 2 2
MIRT445618 CLIC4 chloride intracellular channel 4 2 2
MIRT445709 RBL1 RB transcriptional corepressor like 1 2 2
MIRT445736 ITM2A integral membrane protein 2A 2 2
MIRT445787 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT445796 IFIT1 interferon induced protein with tetratricopeptide repeats 1 2 2
MIRT445801 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT445805 NFATC2 nuclear factor of activated T-cells 2 2 2
MIRT445814 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT445861 ZNF451 zinc finger protein 451 2 2
MIRT445871 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT445964 IKZF5 IKAROS family zinc finger 5 2 2
MIRT445974 TSPYL1 TSPY like 1 2 2
MIRT446013 VNN1 vanin 1 2 2
MIRT446021 HBS1L HBS1 like translational GTPase 2 2
MIRT446080 RCOR3 REST corepressor 3 2 2
MIRT446084 SLC30A10 solute carrier family 30 member 10 2 2
MIRT446102 TSC22D2 TSC22 domain family member 2 2 2
MIRT446174 ZNF37A zinc finger protein 37A 2 2
MIRT446185 FGF1 fibroblast growth factor 1 2 2
MIRT446197 GTPBP4 GTP binding protein 4 2 2
MIRT446212 SLC25A44 solute carrier family 25 member 44 2 2
MIRT446229 C17orf80 chromosome 17 open reading frame 80 2 2
MIRT446311 TBC1D8B TBC1 domain family member 8B 2 2
MIRT446362 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT446383 SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein 2 2
MIRT446411 OCA2 OCA2 melanosomal transmembrane protein 2 2
MIRT446535 GOLGA8B golgin A8 family member B 2 2
MIRT446544 ASTN2 astrotactin 2 2 2
MIRT446563 IDS iduronate 2-sulfatase 2 2
MIRT446569 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT446596 AKAP1 A-kinase anchoring protein 1 2 2
MIRT446703 FUT10 fucosyltransferase 10 2 2
MIRT446778 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT446782 LEPROTL1 leptin receptor overlapping transcript like 1 2 2
MIRT446787 KIF1C kinesin family member 1C 2 2
MIRT446795 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT446801 C5orf30 chromosome 5 open reading frame 30 2 2
MIRT446841 FOXP1 forkhead box P1 2 2
MIRT446848 FIBIN fin bud initiation factor homolog (zebrafish) 2 2
MIRT446865 NBPF3 NBPF member 3 2 2
MIRT446883 TRIM25 tripartite motif containing 25 2 2
MIRT446904 RGS5 regulator of G protein signaling 5 2 2
MIRT446910 GPR89A G protein-coupled receptor 89A 2 2
MIRT446931 AGGF1 angiogenic factor with G-patch and FHA domains 1 2 2
MIRT446942 ZMAT3 zinc finger matrin-type 3 2 2
MIRT446976 SUSD5 sushi domain containing 5 2 2
MIRT447005 RSF1 remodeling and spacing factor 1 2 2
MIRT447027 TACR3 tachykinin receptor 3 2 2
MIRT447037 ZNF439 zinc finger protein 439 2 2
MIRT447050 STARD5 StAR related lipid transfer domain containing 5 2 2
MIRT447056 KCNAB1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 2 2
MIRT447145 HHIP hedgehog interacting protein 2 2
MIRT447152 PRSS12 protease, serine 12 2 2
MIRT447179 PGRMC2 progesterone receptor membrane component 2 2 2
MIRT447198 DNAJC5G DnaJ heat shock protein family (Hsp40) member C5 gamma 2 2
MIRT447210 APBB2 amyloid beta precursor protein binding family B member 2 2 2
MIRT447238 IHH indian hedgehog 2 2
MIRT447271 FZD5 frizzled class receptor 5 2 2
MIRT447322 ZSCAN21 zinc finger and SCAN domain containing 21 2 2
MIRT447390 TMPRSS15 transmembrane protease, serine 15 2 2
MIRT447409 MED21 mediator complex subunit 21 2 2
MIRT447478 NYAP2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 2 2
MIRT447549 C14orf37 chromosome 14 open reading frame 37 2 2
MIRT447628 NDST4 N-deacetylase and N-sulfotransferase 4 2 2
MIRT447645 RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 2 2
MIRT447694 OGN osteoglycin 2 2
MIRT447733 MOCOS molybdenum cofactor sulfurase 2 2
MIRT447739 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT447868 TRNT1 tRNA nucleotidyl transferase 1 2 2
MIRT447979 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT447992 CDX1 caudal type homeobox 1 2 2
MIRT448067 SLC25A43 solute carrier family 25 member 43 2 2
MIRT448113 SEMA4G semaphorin 4G 2 2
MIRT448129 CCDC80 coiled-coil domain containing 80 2 2
MIRT448171 ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 2 2
MIRT448299 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT448447 SMC3 structural maintenance of chromosomes 3 2 2
MIRT448467 SLC45A4 solute carrier family 45 member 4 2 2
MIRT448472 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 4
MIRT448481 SEMA4F ssemaphorin 4F 2 2
MIRT448747 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT448765 GOLGA8A golgin A8 family member A 2 2
MIRT448830 FGD4 FYVE, RhoGEF and PH domain containing 4 2 2
MIRT448852 FEM1C fem-1 homolog C 2 2
MIRT448899 CLOCK clock circadian regulator 2 2
MIRT448905 CLCN6 chloride voltage-gated channel 6 2 4
MIRT448951 CDK19 cyclin dependent kinase 19 2 2
MIRT448974 CADM2 cell adhesion molecule 2 2 2
MIRT449021 AMER2 APC membrane recruitment protein 2 2 2
MIRT449053 NUDT3 nudix hydrolase 3 2 2
MIRT449065 ZNF24 zinc finger protein 24 2 2
MIRT449069 CNDP2 carnosine dipeptidase 2 2 2
MIRT449120 XRRA1 X-ray radiation resistance associated 1 2 2
MIRT449177 LUC7L3 LUC7 like 3 pre-mRNA splicing factor 2 2
MIRT449304 PARP3 poly(ADP-ribose) polymerase family member 3 2 2
MIRT449319 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT449345 GEMIN6 gem nuclear organelle associated protein 6 2 2
MIRT449424 GPR75 G protein-coupled receptor 75 2 2
MIRT449440 STAMBP STAM binding protein 2 2
MIRT449474 ZNF84 zinc finger protein 84 2 2
MIRT449504 TM6SF1 transmembrane 6 superfamily member 1 2 2
MIRT449599 INIP INTS3 and NABP interacting protein 2 4
MIRT449611 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 2 2
MIRT449630 ELAVL4 ELAV like RNA binding protein 4 2 2
MIRT449654 PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 2 2
MIRT449679 CDR1 cerebellar degeneration related protein 1 2 2
MIRT449730 CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 2 2
MIRT449777 NUDT16 nudix hydrolase 16 2 2
MIRT449826 TLR4 toll like receptor 4 2 2
MIRT449832 AGK acylglycerol kinase 2 2
MIRT449855 PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma 2 2
MIRT449927 TPST2 tyrosylprotein sulfotransferase 2 2 2
MIRT450126 NSUN3 NOP2/Sun RNA methyltransferase family member 3 2 2
MIRT450202 ABHD15 abhydrolase domain containing 15 2 2
MIRT450243 TRIM66 tripartite motif containing 66 2 2
MIRT450268 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT450337 MRPL17 mitochondrial ribosomal protein L17 2 4
MIRT450341 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 2 2
MIRT450344 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT450374 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT450408 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT450427 CPOX coproporphyrinogen oxidase 2 2
MIRT450451 ZDHHC2 zinc finger DHHC-type containing 2 2 2
MIRT450463 ENOX1 ecto-NOX disulfide-thiol exchanger 1 2 2
MIRT450527 PGLS 6-phosphogluconolactonase 2 2
MIRT450540 SHFM1 SEM1, 26S proteasome complex subunit 2 2
MIRT450631 ZNF654 zinc finger protein 654 2 2
MIRT450652 TMEM70 transmembrane protein 70 2 2
MIRT450670 SGIP1 SH3 domain GRB2 like endophilin interacting protein 1 2 2
MIRT450685 RPN2 ribophorin II 2 2
MIRT450707 RNF152 ring finger protein 152 2 2
MIRT450765 PPAPDC2 phospholipid phosphatase 6 2 2
MIRT450812 LIFR LIF receptor alpha 2 2
MIRT450867 GPR107 G protein-coupled receptor 107 2 2
MIRT464938 TXLNA taxilin alpha 2 4
MIRT472332 NETO2 neuropilin and tolloid like 2 2 2
MIRT478672 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT485664 CDC25B cell division cycle 25B 2 2
MIRT497300 CD300LB CD300 molecule like family member b 2 2
MIRT497587 SLC23A1 solute carrier family 23 member 1 2 2
MIRT497762 KIAA0895 KIAA0895 2 2
MIRT497815 STAT5B signal transducer and activator of transcription 5B 2 2
MIRT497827 GPR26 G protein-coupled receptor 26 2 2
MIRT497855 LGR5 leucine rich repeat containing G protein-coupled receptor 5 2 2
MIRT497975 XBP1P1 X-box binding protein 1 pseudogene 1 2 2
MIRT498178 CREB1 cAMP responsive element binding protein 1 2 2
MIRT498333 PRELID2 PRELI domain containing 2 2 2
MIRT501771 NRBF2 nuclear receptor binding factor 2 2 6
MIRT504823 RAP2A RAP2A, member of RAS oncogene family 2 6
MIRT510498 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 2 2
MIRT513131 ZNF431 zinc finger protein 431 2 2
MIRT524341 CREBRF CREB3 regulatory factor 2 4
MIRT528236 SPIN4 spindlin family member 4 2 2
MIRT534138 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 2 2
MIRT535420 PDZD8 PDZ domain containing 8 2 2
MIRT535876 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT540789 TMOD2 tropomodulin 2 2 2
MIRT540925 OIP5 Opa interacting protein 5 2 2
MIRT544028 STAM signal transducing adaptor molecule 2 2
MIRT546027 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT551818 TMEM138 transmembrane protein 138 2 2
MIRT556115 MLEC malectin 2 4
MIRT557669 GATA6 GATA binding protein 6 2 2
MIRT568897 MGRN1 mahogunin ring finger 1 2 2
MIRT573538 MDM2 MDM2 proto-oncogene 2 2
MIRT615473 RPS6KA3 ribosomal protein S6 kinase A3 2 2
MIRT618257 DDX51 DEAD-box helicase 51 2 2
MIRT619905 FAM43B family with sequence similarity 43 member B 2 2
MIRT621109 SP110 SP110 nuclear body protein 2 2
MIRT622331 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT622682 PLSCR1 phospholipid scramblase 1 2 2
MIRT624095 DNAJC16 DnaJ heat shock protein family (Hsp40) member C16 2 2
MIRT628661 FAM83C family with sequence similarity 83 member C 2 2
MIRT639259 MANEAL mannosidase endo-alpha like 2 2
MIRT641171 LYPLA1 lysophospholipase I 2 2
MIRT642966 FUT6 fucosyltransferase 6 2 2
MIRT643539 SLC25A17 solute carrier family 25 member 17 2 2
MIRT648679 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT649446 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 2 2
MIRT651353 ZBTB40 zinc finger and BTB domain containing 40 2 2
MIRT651565 WHSC1L1 nuclear receptor binding SET domain protein 3 2 2
MIRT652242 TPPP tubulin polymerization promoting protein 2 2
MIRT653925 SERPINC1 serpin family C member 1 2 2
MIRT654113 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT658395 FAM221B family with sequence similarity 221 member B 2 2
MIRT658581 EPHB1 EPH receptor B1 2 2
MIRT660026 C16orf52 chromosome 16 open reading frame 52 2 2
MIRT661405 GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2 2
MIRT664138 ATP6V1G3 ATPase H+ transporting V1 subunit G3 2 2
MIRT665655 TRIM33 tripartite motif containing 33 2 2
MIRT691641 SLC43A3 solute carrier family 43 member 3 2 2
MIRT692708 MEAF6 MYST/Esa1 associated factor 6 2 2
MIRT693859 IYD iodotyrosine deiodinase 2 2
MIRT702910 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT705052 C5orf15 chromosome 5 open reading frame 15 2 2
MIRT705124 C1orf52 chromosome 1 open reading frame 52 2 2
MIRT705534 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT708676 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT709868 A1CF APOBEC1 complementation factor 2 2
MIRT715657 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT716567 DLGAP2 DLG associated protein 2 2 2
MIRT737090 SIK2 salt inducible kinase 2 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-526b Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-526b 17beta-estradiol (E2) approved 5757 Microarray MCF-7AKT breast cancer cells 19528081 2009 down-regulated
miR-526b 1,2,6-Tri-O-galloyl-beta-D-glucopyranose NULL NULL Microarray HepG2 hepatocarcinoma cells. 22506400 2011 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-526b Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-mir-526b Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-526b-5p Cisplatin 5460033 NSC119875 approved resistant High Germ Cell Tumor cell line (NTERA-2)
hsa-miR-526b-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-526b-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-526b-5p Paclitaxel 36314 NSC125973 approved sensitive Low Non-Small Cell Lung Cancer cell line (A549, H3122)
hsa-miR-526b-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-526b-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-526b-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-526b-5p Paclitaxel 36314 NSC125973 approved resistant cell line (HS578T)
hsa-miR-526b-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-526b-5p Testosterone+Letrozole sensitive cell line (MCF-7)
hsa-miR-526b-5p Testosterone+Exemestane sensitive cell line (MCF-7)
hsa-miR-526b-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-526b-5p Fluorouracil 3385 NSC19893 approved resistant cell line (HCT15)
hsa-miR-526b-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-526b-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-526b-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-526b-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-526b-5p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide sensitive cell line (Bads-200)

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