miRTarBase - #MIRT442685


—
pre-miRNA Information
pre-miRNA hsa-mir-4307   
Genomic Coordinates chr14: 26908642 - 26908725
Description Homo sapiens miR-4307 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4307
Sequence 56| AAUGUUUUUUCCUGUUUCC |74
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1056441032 1 dbSNP
rs776987575 3 dbSNP
rs948027524 8 dbSNP
rs930210474 12 dbSNP
rs191460273 13 dbSNP
rs538831777 14 dbSNP
rs1158802910 15 dbSNP
rs1047679599 17 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC39A9   
Synonyms ZIP-9, ZIP9
Description solute carrier family 39 member 9
Transcript NM_018375   
Expression
Putative miRNA Targets on SLC39A9
3'UTR of SLC39A9
(miRNA target sites are highlighted)		 
>SLC39A9|NM_018375|3'UTR
   1 ATGTTCAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTC
  81 AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAAAACCTGAGTAATGG
 161 AAAAGCTTTTAGAGTAGAAACACATTTACGTTGCAGTTAGCTATAGACATCCCATTGTGTTATCTTTTAAAAGGCCCTTG
 241 ACATTTTGCGTTTTAATATTTCTCTTAACCCTATTCTCAGGGAAGATGGAATTTAGTTTTAAGGAAAAGAGGAGAACTTC
 321 ATACTCACAATGAAATAGTGATTATGAAAATACAGTGTTCTGTAATTAAGCTATGTCTCTTTCTTCTTAGTTTAGAGGCT
 401 CTGCTACTTTATCCATTGATTTTTAACATGGTTCCCACCATGTAAGACTGGTGCTTTAGCATCTATGCCACATGCGTTGA
 481 TGGAAGGTCATAGCACCCACTCACTTAGATGCTAAAGGTGATTCTAGTTAATCTGGGATTAGGGTCAGGAAAATGATAGC
 561 AAGACACATTGAAAGCTCTCTTTATACTCAAAAGAGATATCCATTGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCT
 641 TTGGCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGGAGGAGCTTCTAAAGAGGTGA
 721 CTGGTATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAGTTCT
 801 AGTAGTTTCAGTTCTAGGCTTTCCTTCAAGAACAGTCAGATCACAAAGTGTCTTTGGAAATTAAGGGATATTAAATTTTA
 881 AGTGATTTTTGGATGGTTATTGATATCTTTGTAGTAGCTTTTTTTAAAAGACTACCAAAATGTATGGTTGTCCTTTTTTT
 961 TTGTTTTTTTTTTTTTTAATTATTTCTCTTAGCAGATCAGCAATCCCTCTAGGGACCTAAATACTAGGTCAGCTTTGGCG
1041 ACACTGTGTCTTCTCACATAACCACCTGTAGCAAGATGGATCATAAATGAGAAGTGTTTGCCTATTGATTTAAAGCTTAT
1121 TGGAATCATGTCTCTTGTCTCTTCGTCTTTTCTTTGCTTTTCTTCTAACTTTTCCCTCTAGCCTCTCCTCGCCACAATTT
1201 GCTGCTTACTGCTGGTGTTAATATTTGTGTGGGATGAATTCTTATCAGGACAACCACTTCTCGAACTGTAATAATGAAGA
1281 TAATAATATCTTTATTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCCTTAAAATAC
1361 CACCTCCTCATGTGTAAATTGACACAATCACTAATCTGGTAATTTAAACAATTGAGATAGCAAAAGTGTTTAACAGACTA
1441 GGATAATTTTTTTTTCATATTTGCCAAAATTTTTGTAAACCCTGTCTTGTCAAATAAGTGTATAATATTGTATTATTAAT
1521 TTATTTTTACTTTCTATACCATTTCAAAACACATTACACTAAGGGGGAACCAAGACTAGTTTCTTCAGGGCAGTGGACGT
1601 AGTAGTTTGTAAAAACGTTTTCTATGACGCATAAGCTAGCATGCCTATGATTTATTTCCTTCATGAATTTGTCACTGGAT
1681 CAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCTGGCCACAGTGAGGAAAGTAGCACAAATAGGATACAGTTGTATG
1761 TAGTCATTGGCAACAATTGCATACAATTTTACTACCAAGAGAAGGTATAGTATGGAAAGTCCAAATGACTTCCTTGATTG
1841 GATGTTAACAGCTGACTGGTGTGAGACTTGAGGTTTCATCTAGTCCTTCAAAACTATATGGTTGCCTAGATTCTCTCTGG
1921 AAACTGACTTTGTCAAATAAATAGCAGATTGTAGTGTCTGGTTTGGTTTGGACAGTAGTGCTTTCTATCATATTGTTGTG
2001 TGCAATGGTAATTTGTTCTACTGGCCAAAGCCTCTTTCAGCAGTGCCTTGCCATCATGCTTAAAAGTTTGGCTAGTATAT
2081 CTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATTGAACCATCTGACTTCCAAATTTGCCTTCCCCTCTGGACCTCACTA
2161 TTAACAAGCAAACCTTTCAGGGCCCTCTTAGCTCTCAGAAGCTATGTATGGGCTTTCCCAGATTTTAAAGCTGCTGCCTC
2241 GAGAACTACTCATTTCTCTCCTGGTCAGCAGACAGAAATAGCCATACTAATCTCATAGGGCTCAAATGCATCTTCAGGCA
2321 GCAGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAGCTTGCTGGCATGGTGGGCAGTATTCCAGGAGA
2401 GGCCATGTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTTTTCCTCTTGTTTAAAACTGCCTCTTTAGATGTGGATGC
2481 CTTAATGCTGTAACACATTTGAAAACATTGGCAATACTTAAGTTGCTGCCATGATTACAGATGGAATTATTGGCTACCAA
2561 AGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAGTTAATCTTAATTGCAATTTGACTCCGTT
2641 TCCTTGGTAGGGATAGACTTTCTTCAGATTCCAAGTGCTCTCTTAAATGGCAAATTAAGTTAAAGAATACTACTGCTCCA
2721 TTCCCCTCACTTATTCTCCAGTTAATTGCTTGTCAGTTCCATTTCAAGAAAGCAGTGATGTTCCAGGTTTGATTCAGTTT
2801 TCCTGTGCACACTATTGCCAAATTTTTTTTTAGCAAAGATTCTGCACTGGAACGTAGACAGTTGGAAACAGTACTACCTA
2881 CCTAGAGGTTATGTGTTTTCTCTTTCTCCCCGCTTTCACCTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAGCCCTGTT
2961 CTGGTATTTTGAATCATTAGAGAAAAGAAAGGGAGTGGCTGTTTTGAGTTGTCCTTTCTTTGCAGAAAGGAGAAAATGTG
3041 ATTGTGTTTTTTTTTTACCAGCCTACTTCTAAGTGTCACTGCCTGGTTTTTCTCTTTTTCAAGGATTAGAACTAAGAGGA
3121 CACACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCGTATGACAGCAGCA
3201 CAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGA
3281 ACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAAT
3361 ACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAATTAAAACCTCTTTGTACCTGAGACATCTAGA
3441 TTCACCTCAGGAGGCCTGAAGGAAATGTGTAACTTGTGGGAAAGAACTAGACAACCATTTAGGAATTCTCTAGATATACT
3521 CAGCCTAACCCAGTGGCTTAACACAAGGAGATTGGCTTTGATCTTTTTTTCTTGTGGCATCTTCCAGCAAGTTAGAAGTC
3601 TCATGGGATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTA
3681 AACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCTCTTTCCACTTTAATTGTGAATGGTTAAAAAAATGCTG
3761 TTTTCTGATATTAAATTTTTATTAGTGCATACCTTAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ccUUUGUCCUUUUUUGUAa 5'
            | |||   :||||||| 
Target 5' taACACATTTGAAAACATt 3'
 2491 - 2509 149.00 -5.90
2 
miRNA  3' ccUUUGUCCUUUUUUGUAa 5'
            |:| ||||:||||::| 
Target 5' gcAGAAAGGAGAAAATGTg 3'
 3022 - 3040 137.00 -7.62
3 
miRNA  3' ccuUUGUC---CUUUUUUGUAa 5'
             |::||   | ||||||:| 
Target 5' cgtAGTAGTTTGTAAAAACGTt 3'
 1598 - 1619 136.00 -5.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31526317 55 COSMIC
COSN31537942 102 COSMIC
COSN1170520 103 COSMIC
COSN30140601 139 COSMIC
COSN31553676 190 COSMIC
COSN31571426 330 COSMIC
COSN31607894 532 COSMIC
COSN31532359 590 COSMIC
COSN27319662 655 COSMIC
COSN7025123 963 COSMIC
COSN20111426 978 COSMIC
COSN6257457 1146 COSMIC
COSN20092853 1244 COSMIC
COSN6638369 1245 COSMIC
COSN29614129 1456 COSMIC
COSN31562889 1456 COSMIC
COSN27330334 1625 COSMIC
COSN19656940 1650 COSMIC
COSN31535940 1736 COSMIC
COSN17182157 1757 COSMIC
COSN19596037 2529 COSMIC
COSN28881289 2832 COSMIC
COSN31484706 3057 COSMIC
COSN30666723 3151 COSMIC
COSN31555508 3233 COSMIC
COSN8848751 3458 COSMIC
rs8007933 749 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1203536386 9 dbSNP
rs1035430823 11 dbSNP
rs752519831 22 dbSNP
rs111365600 24 dbSNP
rs1384332544 25 dbSNP
rs1421853343 28 dbSNP
rs1217445915 29 dbSNP
rs763937757 31 dbSNP
rs371562341 32 dbSNP
rs1452416736 37 dbSNP
rs1317890740 51 dbSNP
rs1390212427 52 dbSNP
rs770250963 55 dbSNP
rs938515280 56 dbSNP
rs2232062 60 dbSNP
rs896593027 61 dbSNP
rs112304069 67 dbSNP
rs1375528439 68 dbSNP
rs1350416645 72 dbSNP
rs1398946786 79 dbSNP
rs1275939669 84 dbSNP
rs1408071222 87 dbSNP
rs549247581 90 dbSNP
rs985688162 101 dbSNP
rs879651432 102 dbSNP
rs1426723495 106 dbSNP
rs965562442 110 dbSNP
rs1200986391 111 dbSNP
rs567479245 112 dbSNP
rs1001556455 113 dbSNP
rs182499903 119 dbSNP
rs1219585892 121 dbSNP
rs768295191 123 dbSNP
rs1281544980 126 dbSNP
rs997656490 128 dbSNP
rs1281051453 129 dbSNP
rs1053722183 139 dbSNP
rs1368396084 155 dbSNP
rs1030427312 160 dbSNP
rs1439908214 174 dbSNP
rs1402246111 177 dbSNP
rs915213517 181 dbSNP
rs188400979 187 dbSNP
rs1004549741 190 dbSNP
rs571278836 191 dbSNP
rs1265666270 199 dbSNP
rs1044298994 201 dbSNP
rs116745315 204 dbSNP
rs1191038720 208 dbSNP
rs1406578482 209 dbSNP
rs1423679595 223 dbSNP
rs1177174811 228 dbSNP
rs140550640 229 dbSNP
rs1240513931 230 dbSNP
rs1199673443 235 dbSNP
rs1461101201 237 dbSNP
rs980456839 246 dbSNP
rs1057322014 250 dbSNP
rs867864184 251 dbSNP
rs1283614617 257 dbSNP
rs960207285 259 dbSNP
rs1379053613 265 dbSNP
rs993891162 266 dbSNP
rs1309817300 271 dbSNP
rs1395113675 281 dbSNP
rs1451732527 287 dbSNP
rs1380290015 288 dbSNP
rs1304276018 297 dbSNP
rs1466202730 304 dbSNP
rs1344195815 305 dbSNP
rs992675035 313 dbSNP
rs913037915 317 dbSNP
rs114314463 322 dbSNP
rs1444474985 323 dbSNP
rs952341191 324 dbSNP
rs1241664501 329 dbSNP
rs1007582280 330 dbSNP
rs1183860781 331 dbSNP
rs147099348 339 dbSNP
rs1018520928 350 dbSNP
rs1042485876 357 dbSNP
rs759854052 358 dbSNP
rs965969828 363 dbSNP
rs773876743 374 dbSNP
rs555221754 376 dbSNP
rs1365238531 387 dbSNP
rs900766362 395 dbSNP
rs1314646307 400 dbSNP
rs1396343078 401 dbSNP
rs997689092 405 dbSNP
rs976950618 407 dbSNP
rs1401385132 413 dbSNP
rs1031552746 415 dbSNP
rs1004623610 439 dbSNP
rs1424552625 440 dbSNP
rs1167380704 441 dbSNP
rs956800567 441 dbSNP
rs989499829 444 dbSNP
rs915262897 455 dbSNP
rs963400252 456 dbSNP
rs1001227835 466 dbSNP
rs1034403794 470 dbSNP
rs1221789494 473 dbSNP
rs1317818820 474 dbSNP
rs529824321 476 dbSNP
rs573479750 477 dbSNP
rs112024835 481 dbSNP
rs1306697591 492 dbSNP
rs1293075224 500 dbSNP
rs879381678 503 dbSNP
rs1220068008 505 dbSNP
rs1245290616 511 dbSNP
rs1302023754 515 dbSNP
rs992707505 532 dbSNP
rs192861238 544 dbSNP
rs913111302 556 dbSNP
rs967189566 558 dbSNP
rs746845755 562 dbSNP
rs927228481 562 dbSNP
rs938564846 563 dbSNP
rs1056980175 564 dbSNP
rs565341429 565 dbSNP
rs1168850629 581 dbSNP
rs770743648 581 dbSNP
rs1478942421 586 dbSNP
rs896968436 588 dbSNP
rs1156371755 590 dbSNP
rs138532035 601 dbSNP
rs1198803787 607 dbSNP
rs936720254 612 dbSNP
rs1048161948 621 dbSNP
rs1210343695 622 dbSNP
rs375158766 629 dbSNP
rs1039041344 632 dbSNP
rs1200263295 633 dbSNP
rs1318184280 637 dbSNP
rs1282183718 638 dbSNP
rs921887654 639 dbSNP
rs60626412 644 dbSNP
rs1304113230 645 dbSNP
rs766989250 647 dbSNP
rs1396354082 648 dbSNP
rs879168491 649 dbSNP
rs1018320281 651 dbSNP
rs1467455185 653 dbSNP
rs562680398 655 dbSNP
rs1175966346 656 dbSNP
rs1477112768 666 dbSNP
rs1379427044 667 dbSNP
rs1199547161 669 dbSNP
rs1418466237 672 dbSNP
rs1236239610 673 dbSNP
rs530018193 682 dbSNP
rs1288034790 688 dbSNP
rs1457995066 688 dbSNP
rs1262192315 699 dbSNP
rs548317095 700 dbSNP
rs760569759 708 dbSNP
rs1031145828 712 dbSNP
rs1356698305 715 dbSNP
rs1038253726 716 dbSNP
rs1256108058 727 dbSNP
rs898930309 727 dbSNP
rs1335699614 735 dbSNP
rs1307622332 744 dbSNP
rs548383645 746 dbSNP
rs8007933 749 dbSNP
rs989553343 752 dbSNP
rs1022327650 769 dbSNP
rs969832412 770 dbSNP
rs980798280 772 dbSNP
rs528383263 780 dbSNP
rs1227719421 783 dbSNP
rs927927592 785 dbSNP
rs1404571220 806 dbSNP
rs1257969849 829 dbSNP
rs895483765 833 dbSNP
rs938631356 843 dbSNP
rs1173259808 845 dbSNP
rs1184616259 846 dbSNP
rs993135630 847 dbSNP
rs918452409 849 dbSNP
rs1180428708 857 dbSNP
rs1440146458 861 dbSNP
rs377635633 868 dbSNP
rs753574977 873 dbSNP
rs1185093212 879 dbSNP
rs1443807305 885 dbSNP
rs1256350441 894 dbSNP
rs1204037445 902 dbSNP
rs1234062473 904 dbSNP
rs1048214032 912 dbSNP
rs888201959 913 dbSNP
rs1180889468 919 dbSNP
rs1284571326 921 dbSNP
rs1411244610 926 dbSNP
rs942411374 927 dbSNP
rs1039382542 930 dbSNP
rs1354923144 933 dbSNP
rs1446215610 941 dbSNP
rs900809437 943 dbSNP
rs998469135 947 dbSNP
rs1031199874 948 dbSNP
rs1160437027 952 dbSNP
rs1420263319 953 dbSNP
rs1161255922 954 dbSNP
rs35993638 954 dbSNP
rs1399280249 960 dbSNP
rs892669121 961 dbSNP
rs1368747701 962 dbSNP
rs1463948160 963 dbSNP
rs1289723461 964 dbSNP
rs61361699 964 dbSNP
rs71446391 964 dbSNP
rs74862400 964 dbSNP
rs796585601 964 dbSNP
rs879090127 964 dbSNP
rs78777045 965 dbSNP
rs1022379723 966 dbSNP
rs1447446124 967 dbSNP
rs879026780 968 dbSNP
rs1338656550 969 dbSNP
rs1002676962 970 dbSNP
rs1035052110 971 dbSNP
rs1364890512 972 dbSNP
rs1033225077 973 dbSNP
rs1391151447 978 dbSNP
rs558716919 978 dbSNP
rs1234131285 979 dbSNP
rs200849329 980 dbSNP
rs1277895457 983 dbSNP
rs183564839 987 dbSNP
rs1198028123 989 dbSNP
rs571461082 990 dbSNP
rs958149659 991 dbSNP
rs1437882224 992 dbSNP
rs1193774196 995 dbSNP
rs1208887038 999 dbSNP
rs751787692 1004 dbSNP
rs1475946363 1012 dbSNP
rs1246706721 1018 dbSNP
rs1188234582 1027 dbSNP
rs921988887 1029 dbSNP
rs1453737494 1036 dbSNP
rs1290997489 1043 dbSNP
rs1422595758 1044 dbSNP
rs1476737499 1045 dbSNP
rs1198352300 1054 dbSNP
rs1316311647 1055 dbSNP
rs933311043 1065 dbSNP
rs188448815 1078 dbSNP
rs908153603 1080 dbSNP
rs992781187 1081 dbSNP
rs1413969537 1084 dbSNP
rs1350354429 1094 dbSNP
rs550680945 1097 dbSNP
rs1037882737 1102 dbSNP
rs899291389 1110 dbSNP
rs796143915 1121 dbSNP
rs78786480 1125 dbSNP
rs1422421577 1127 dbSNP
rs1190023136 1133 dbSNP
rs1479302241 1142 dbSNP
rs1247741154 1145 dbSNP
rs983964190 1146 dbSNP
rs909687055 1151 dbSNP
rs1055622 1152 dbSNP
rs942482006 1161 dbSNP
rs1297851342 1162 dbSNP
rs1338857710 1166 dbSNP
rs556341364 1171 dbSNP
rs1311716339 1178 dbSNP
rs1055623 1188 dbSNP
rs1039840157 1191 dbSNP
rs922318467 1192 dbSNP
rs569098976 1194 dbSNP
rs1368235979 1210 dbSNP
rs1345008525 1222 dbSNP
rs1308363740 1228 dbSNP
rs1217982720 1241 dbSNP
rs1052674600 1244 dbSNP
rs554279444 1261 dbSNP
rs757338069 1263 dbSNP
rs534347061 1264 dbSNP
rs1357033187 1265 dbSNP
rs192390993 1273 dbSNP
rs534223125 1279 dbSNP
rs1195140027 1291 dbSNP
rs1043891742 1293 dbSNP
rs1477621329 1304 dbSNP
rs905342241 1323 dbSNP
rs184935434 1329 dbSNP
rs1240376499 1334 dbSNP
rs188265020 1338 dbSNP
rs1435457647 1342 dbSNP
rs1235891005 1364 dbSNP
rs960781111 1368 dbSNP
rs1158248472 1370 dbSNP
rs144063699 1384 dbSNP
rs1026286641 1386 dbSNP
rs1237841779 1395 dbSNP
rs562616929 1403 dbSNP
rs1355640096 1404 dbSNP
rs1309754594 1419 dbSNP
rs1384270012 1424 dbSNP
rs987447318 1443 dbSNP
rs951291136 1444 dbSNP
rs1304220586 1447 dbSNP
rs1359322554 1447 dbSNP
rs202198972 1447 dbSNP
rs940956843 1448 dbSNP
rs1330898931 1471 dbSNP
rs1434880921 1485 dbSNP
rs1306313002 1494 dbSNP
rs574611140 1495 dbSNP
rs745975900 1498 dbSNP
rs984012871 1499 dbSNP
rs1411985082 1505 dbSNP
rs1183806331 1506 dbSNP
rs1348187026 1506 dbSNP
rs909739058 1509 dbSNP
rs1206536662 1540 dbSNP
rs1483648429 1552 dbSNP
rs538572062 1562 dbSNP
rs1262102961 1565 dbSNP
rs1262527324 1568 dbSNP
rs1214493966 1577 dbSNP
rs1489244090 1584 dbSNP
rs191578937 1592 dbSNP
rs975223689 1599 dbSNP
rs922341024 1600 dbSNP
rs1055941606 1605 dbSNP
rs933701425 1609 dbSNP
rs1191633706 1610 dbSNP
rs749097670 1617 dbSNP
rs1339396467 1618 dbSNP
rs1052057546 1621 dbSNP
rs552141208 1623 dbSNP
rs1363015128 1625 dbSNP
rs913548075 1630 dbSNP
rs78833625 1632 dbSNP
rs1457772808 1636 dbSNP
rs1362140791 1639 dbSNP
rs780718715 1648 dbSNP
rs11537776 1650 dbSNP
rs1167224407 1651 dbSNP
rs1002783873 1652 dbSNP
rs1056599181 1666 dbSNP
rs1475677069 1675 dbSNP
rs546566936 1676 dbSNP
rs184673612 1680 dbSNP
rs896089287 1682 dbSNP
rs1478839913 1686 dbSNP
rs1026335543 1696 dbSNP
rs887757733 1704 dbSNP
rs1005499371 1708 dbSNP
rs774036755 1723 dbSNP
rs1267021020 1737 dbSNP
rs1221963831 1740 dbSNP
rs1316932526 1754 dbSNP
rs963950518 1757 dbSNP
rs1275843902 1766 dbSNP
rs747800651 1785 dbSNP
rs975654115 1796 dbSNP
rs954801223 1797 dbSNP
rs1386674456 1798 dbSNP
rs1366061131 1808 dbSNP
rs571745677 1809 dbSNP
rs538125936 1811 dbSNP
rs1014919246 1812 dbSNP
rs1399925899 1813 dbSNP
rs550815567 1817 dbSNP
rs955137285 1825 dbSNP
rs1373686732 1832 dbSNP
rs1198197246 1840 dbSNP
rs1431386767 1860 dbSNP
rs973711541 1862 dbSNP
rs1194030548 1868 dbSNP
rs1457153514 1871 dbSNP
rs771791541 1880 dbSNP
rs1200119670 1892 dbSNP
rs1240689116 1897 dbSNP
rs1254935613 1899 dbSNP
rs1230373420 1905 dbSNP
rs1310972222 1906 dbSNP
rs913600365 1910 dbSNP
rs958955611 1911 dbSNP
rs1376599691 1912 dbSNP
rs1329608793 1921 dbSNP
rs946378550 1925 dbSNP
rs1260983021 1933 dbSNP
rs1397414581 1943 dbSNP
rs991662245 1947 dbSNP
rs979748732 1948 dbSNP
rs149697819 1949 dbSNP
rs1041478953 1952 dbSNP
rs772664310 1953 dbSNP
rs760193888 1954 dbSNP
rs926874046 1957 dbSNP
rs1177948627 1961 dbSNP
rs1180234748 1962 dbSNP
rs1438070629 1964 dbSNP
rs1254979639 1965 dbSNP
rs1198238321 1966 dbSNP
rs1472441436 1967 dbSNP
rs1248448854 1972 dbSNP
rs1235625494 1983 dbSNP
rs1353564683 1991 dbSNP
rs1420990603 1993 dbSNP
rs1242690629 1999 dbSNP
rs1336580744 2000 dbSNP
rs757410308 2001 dbSNP
rs1333747159 2023 dbSNP
rs766240869 2024 dbSNP
rs568938028 2027 dbSNP
rs1404419129 2031 dbSNP
rs1313455324 2038 dbSNP
rs924329020 2040 dbSNP
rs1378352787 2046 dbSNP
rs1182764046 2054 dbSNP
rs189947368 2062 dbSNP
rs1470352653 2064 dbSNP
rs935647267 2070 dbSNP
rs1474424835 2073 dbSNP
rs1167638032 2075 dbSNP
rs548314509 2078 dbSNP
rs796067921 2080 dbSNP
rs1257640635 2083 dbSNP
rs1215195358 2092 dbSNP
rs1054103986 2106 dbSNP
rs181349604 2107 dbSNP
rs1207330058 2112 dbSNP
rs1465513536 2114 dbSNP
rs533819595 2114 dbSNP
rs1242846194 2116 dbSNP
rs887810497 2117 dbSNP
rs996742600 2117 dbSNP
rs1399420235 2121 dbSNP
rs1296987152 2126 dbSNP
rs1050889194 2131 dbSNP
rs186835934 2143 dbSNP
rs1161199872 2146 dbSNP
rs1006222764 2151 dbSNP
rs1017565052 2152 dbSNP
rs759363162 2159 dbSNP
rs764990856 2164 dbSNP
rs1008973396 2166 dbSNP
rs1261727179 2174 dbSNP
rs996745851 2178 dbSNP
rs1014951894 2190 dbSNP
rs1447981207 2196 dbSNP
rs1029935127 2202 dbSNP
rs1307243243 2205 dbSNP
rs577142821 2206 dbSNP
rs73275024 2209 dbSNP
rs1231078837 2212 dbSNP
rs1294835597 2216 dbSNP
rs556350550 2237 dbSNP
rs188969135 2241 dbSNP
rs967734169 2242 dbSNP
rs979518936 2250 dbSNP
rs1027619695 2252 dbSNP
rs1271897392 2253 dbSNP
rs1431431547 2259 dbSNP
rs1330399531 2261 dbSNP
rs959213922 2274 dbSNP
rs1406808058 2287 dbSNP
rs991736061 2288 dbSNP
rs554196322 2297 dbSNP
rs866470904 2299 dbSNP
rs767873763 2307 dbSNP
rs1186557389 2334 dbSNP
rs977192039 2336 dbSNP
rs541952827 2338 dbSNP
rs866675584 2339 dbSNP
rs992403008 2348 dbSNP
rs560673603 2360 dbSNP
rs143331970 2364 dbSNP
rs1198211561 2370 dbSNP
rs1316248497 2380 dbSNP
rs1275230208 2385 dbSNP
rs1215174014 2388 dbSNP
rs918117082 2389 dbSNP
rs1272997422 2393 dbSNP
rs929450005 2395 dbSNP
rs1474312701 2402 dbSNP
rs1330313421 2403 dbSNP
rs76655591 2406 dbSNP
rs1050964357 2407 dbSNP
rs887863536 2411 dbSNP
rs942093371 2412 dbSNP
rs1039457642 2440 dbSNP
rs568430166 2441 dbSNP
rs1425172610 2451 dbSNP
rs750470893 2456 dbSNP
rs1455893538 2462 dbSNP
rs1396097774 2466 dbSNP
rs1178356890 2472 dbSNP
rs997196798 2474 dbSNP
rs1051014061 2480 dbSNP
rs890998320 2486 dbSNP
rs1234750079 2492 dbSNP
rs1375343136 2506 dbSNP
rs1463064906 2509 dbSNP
rs546206362 2532 dbSNP
rs1036794460 2533 dbSNP
rs897909798 2537 dbSNP
rs1236369985 2538 dbSNP
rs1348453384 2540 dbSNP
rs867432841 2556 dbSNP
rs1196911449 2558 dbSNP
rs1308290343 2559 dbSNP
rs1237620319 2564 dbSNP
rs368965515 2567 dbSNP
rs1028108109 2568 dbSNP
rs1446730426 2569 dbSNP
rs1020711995 2571 dbSNP
rs1314134230 2572 dbSNP
rs1356911048 2572 dbSNP
rs1414801136 2580 dbSNP
rs894467798 2582 dbSNP
rs967786572 2586 dbSNP
rs1158418798 2589 dbSNP
rs756264951 2593 dbSNP
rs1355822868 2597 dbSNP
rs1033788869 2604 dbSNP
rs1177974511 2608 dbSNP
rs1472531655 2614 dbSNP
rs1235838730 2615 dbSNP
rs971615630 2619 dbSNP
rs977600231 2626 dbSNP
rs1031805633 2629 dbSNP
rs957352741 2634 dbSNP
rs535634567 2637 dbSNP
rs1307329246 2638 dbSNP
rs1228074894 2639 dbSNP
rs989914367 2640 dbSNP
rs1484747144 2651 dbSNP
rs778757344 2653 dbSNP
rs780699974 2654 dbSNP
rs1376664961 2659 dbSNP
rs1213335030 2661 dbSNP
rs959054895 2663 dbSNP
rs1258435856 2666 dbSNP
rs532461692 2676 dbSNP
rs992852492 2680 dbSNP
rs1452146075 2682 dbSNP
rs1347286757 2694 dbSNP
rs1160240830 2706 dbSNP
rs375326640 2710 dbSNP
rs1185079228 2720 dbSNP
rs1415881888 2723 dbSNP
rs1190159167 2724 dbSNP
rs1458406776 2727 dbSNP
rs950904037 2734 dbSNP
rs983626839 2742 dbSNP
rs1262464585 2751 dbSNP
rs147329523 2765 dbSNP
rs1429688207 2767 dbSNP
rs754358585 2769 dbSNP
rs939904698 2770 dbSNP
rs1175949521 2772 dbSNP
rs942127144 2781 dbSNP
rs367884794 2784 dbSNP
rs755343830 2807 dbSNP
rs1432280309 2815 dbSNP
rs1175149805 2818 dbSNP
rs921961463 2822 dbSNP
rs1049131617 2823 dbSNP
rs930754923 2823 dbSNP
rs933333621 2823 dbSNP
rs1364642200 2828 dbSNP
rs529940662 2837 dbSNP
rs1375613598 2840 dbSNP
rs1429771651 2849 dbSNP
rs894503111 2854 dbSNP
rs779181253 2855 dbSNP
rs891052312 2862 dbSNP
rs1009413167 2865 dbSNP
rs1167360154 2868 dbSNP
rs1462081164 2871 dbSNP
rs1422976164 2874 dbSNP
rs1024282899 2877 dbSNP
rs907462470 2878 dbSNP
rs1042222713 2881 dbSNP
rs1262256283 2887 dbSNP
rs999069958 2888 dbSNP
rs1487375126 2889 dbSNP
rs369995904 2891 dbSNP
rs1001049728 2893 dbSNP
rs1213894788 2896 dbSNP
rs1316874898 2902 dbSNP
rs1255634026 2907 dbSNP
rs1228899423 2909 dbSNP
rs957555586 2911 dbSNP
rs566592585 2912 dbSNP
rs527268449 2913 dbSNP
rs1441961949 2927 dbSNP
rs953776419 2932 dbSNP
rs181727497 2935 dbSNP
rs1463582534 2942 dbSNP
rs1373628802 2949 dbSNP
rs1024613148 2958 dbSNP
rs1175243866 2962 dbSNP
rs1281315925 2970 dbSNP
rs1396693500 2977 dbSNP
rs1353346782 2988 dbSNP
rs1045301 2998 dbSNP
rs1247900702 3002 dbSNP
rs376608039 3003 dbSNP
rs369963478 3004 dbSNP
rs1197105303 3005 dbSNP
rs1480666447 3013 dbSNP
rs912188032 3017 dbSNP
rs1486380118 3025 dbSNP
rs1191155113 3033 dbSNP
rs1235390909 3047 dbSNP
rs1346295794 3047 dbSNP
rs878964440 3047 dbSNP
rs186428485 3048 dbSNP
rs1452044833 3049 dbSNP
rs1435314753 3057 dbSNP
rs1267750722 3062 dbSNP
rs1397264348 3063 dbSNP
rs972666033 3065 dbSNP
rs909402721 3066 dbSNP
rs1335699370 3067 dbSNP
rs1377402985 3070 dbSNP
rs1230427130 3075 dbSNP
rs963571965 3076 dbSNP
rs1314058936 3078 dbSNP
rs1176344124 3080 dbSNP
rs149457691 3083 dbSNP
rs1316900742 3084 dbSNP
rs975273155 3085 dbSNP
rs922042742 3086 dbSNP
rs762505377 3091 dbSNP
rs568548794 3095 dbSNP
rs1438846450 3098 dbSNP
rs1381792444 3099 dbSNP
rs781258128 3100 dbSNP
rs1051730163 3101 dbSNP
rs777409884 3103 dbSNP
rs111495442 3104 dbSNP
rs1412403161 3110 dbSNP
rs756347817 3115 dbSNP
rs1414278486 3117 dbSNP
rs1418364152 3118 dbSNP
rs945320562 3122 dbSNP
rs1042274347 3124 dbSNP
rs1156897470 3124 dbSNP
rs1413469318 3131 dbSNP
rs1353405410 3133 dbSNP
rs189660282 3134 dbSNP
rs1175225431 3137 dbSNP
rs903717033 3139 dbSNP
rs1450616096 3142 dbSNP
rs1303728993 3146 dbSNP
rs1456817682 3148 dbSNP
rs1412940854 3149 dbSNP
rs1373056272 3150 dbSNP
rs1408493643 3159 dbSNP
rs936513901 3181 dbSNP
rs1055324487 3182 dbSNP
rs1382477412 3183 dbSNP
rs1045765474 3187 dbSNP
rs537771501 3188 dbSNP
rs553952254 3190 dbSNP
rs1185245148 3199 dbSNP
rs770488323 3202 dbSNP
rs1304334853 3203 dbSNP
rs1260284812 3204 dbSNP
rs907200848 3211 dbSNP
rs886087739 3216 dbSNP
rs1282621084 3220 dbSNP
rs1372674409 3231 dbSNP
rs1222322214 3234 dbSNP
rs1005172766 3235 dbSNP
rs148648575 3236 dbSNP
rs963925542 3237 dbSNP
rs1357424741 3240 dbSNP
rs35662607 3241 dbSNP
rs1293878841 3243 dbSNP
rs1399364649 3247 dbSNP
rs1324567701 3255 dbSNP
rs1320063499 3259 dbSNP
rs974947523 3270 dbSNP
rs1213393805 3271 dbSNP
rs1271830452 3306 dbSNP
rs1011767197 3312 dbSNP
rs1028872840 3320 dbSNP
rs1470269888 3324 dbSNP
rs1169281488 3327 dbSNP
rs117254841 3328 dbSNP
rs1240795088 3332 dbSNP
rs1195862900 3339 dbSNP
rs954838071 3340 dbSNP
rs987499868 3346 dbSNP
rs558192662 3350 dbSNP
rs1253135856 3354 dbSNP
rs1252662538 3356 dbSNP
rs1212026059 3361 dbSNP
rs913266226 3362 dbSNP
rs1007928063 3367 dbSNP
rs1214003162 3374 dbSNP
rs946041502 3376 dbSNP
rs978016563 3381 dbSNP
rs925224563 3383 dbSNP
rs1369928392 3400 dbSNP
rs936549086 3404 dbSNP
rs866265989 3417 dbSNP
rs759432880 3419 dbSNP
rs973083795 3423 dbSNP
rs949137830 3429 dbSNP
rs919872075 3435 dbSNP
rs576553506 3437 dbSNP
rs769800627 3438 dbSNP
rs990676525 3439 dbSNP
rs1394890758 3456 dbSNP
rs1004555804 3468 dbSNP
rs1470007499 3470 dbSNP
rs1253793620 3477 dbSNP
rs1203982371 3481 dbSNP
rs1436126646 3492 dbSNP
rs544509869 3495 dbSNP
rs1275074927 3502 dbSNP
rs1016309563 3512 dbSNP
rs1392001772 3514 dbSNP
rs948822776 3515 dbSNP
rs1045842630 3522 dbSNP
rs899428206 3524 dbSNP
rs182292760 3525 dbSNP
rs1462996183 3526 dbSNP
rs529828475 3530 dbSNP
rs542031704 3532 dbSNP
rs762818678 3536 dbSNP
rs186043624 3541 dbSNP
rs1375316173 3544 dbSNP
rs142157402 3553 dbSNP
rs889951307 3556 dbSNP
rs1395967978 3564 dbSNP
rs1176798673 3567 dbSNP
rs1468758366 3585 dbSNP
rs1020321038 3588 dbSNP
rs1291883813 3604 dbSNP
rs1007957539 3606 dbSNP
rs967395048 3619 dbSNP
rs978737510 3626 dbSNP
rs1278094499 3629 dbSNP
rs7276 3634 dbSNP
rs1214902137 3643 dbSNP
rs1348298294 3647 dbSNP
rs961389434 3649 dbSNP
rs993867168 3655 dbSNP
rs1375008751 3671 dbSNP
rs936619458 3674 dbSNP
rs750738543 3675 dbSNP
rs1027026957 3679 dbSNP
rs1311566636 3685 dbSNP
rs1272868400 3698 dbSNP
rs952666766 3699 dbSNP
rs1360139931 3701 dbSNP
rs1158769147 3714 dbSNP
rs1399186852 3725 dbSNP
rs1410350673 3730 dbSNP
rs1045534 3731 dbSNP
rs780807826 3732 dbSNP
rs1474913687 3735 dbSNP
rs1255380712 3747 dbSNP
rs1189939332 3749 dbSNP
rs1485936071 3749 dbSNP
rs554756051 3753 dbSNP
rs1213319343 3756 dbSNP
rs760822171 3757 dbSNP
rs949197574 3769 dbSNP
rs1284518733 3771 dbSNP
rs1234114168 3772 dbSNP
rs1023511262 3787 dbSNP
rs766610919 3788 dbSNP
rs981551233 3795 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000031146.4 | 3UTR | UUGGCAAUACUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
107 hsa-miR-4307 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT091681 RARB retinoic acid receptor beta 2 6
MIRT097311 AGGF1 angiogenic factor with G-patch and FHA domains 1 2 2
MIRT099878 SOX4 SRY-box 4 2 2
MIRT114514 ARF6 ADP ribosylation factor 6 2 2
MIRT163479 WNT5A Wnt family member 5A 2 2
MIRT186633 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT194921 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT230189 AKAP17A A-kinase anchoring protein 17A 2 2
MIRT281397 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT328018 RLIM ring finger protein, LIM domain interacting 2 2
MIRT354896 SEC62 SEC62 homolog, preprotein translocation factor 2 2
MIRT361422 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT442526 MOB3B MOB kinase activator 3B 2 2
MIRT442629 NUDT12 nudix hydrolase 12 2 2
MIRT442685 SLC39A9 solute carrier family 39 member 9 2 2
MIRT444131 BRCA2 BRCA2, DNA repair associated 2 2
MIRT444174 RBM7 RNA binding motif protein 7 2 2
MIRT446045 TPR translocated promoter region, nuclear basket protein 2 2
MIRT447984 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT460527 S100A11 S100 calcium binding protein A11 2 4
MIRT466861 STX6 syntaxin 6 2 2
MIRT468806 SAP18 Sin3A associated protein 18 2 6
MIRT480269 C8orf4 chromosome 8 open reading frame 4 2 2
MIRT493119 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT499168 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 8
MIRT500507 ZBTB34 zinc finger and BTB domain containing 34 2 2
MIRT503021 CAND1 cullin associated and neddylation dissociated 1 2 2
MIRT505314 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT506123 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT509346 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 4
MIRT509446 POU2F2 POU class 2 homeobox 2 2 6
MIRT509598 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT516008 GPN2 GPN-loop GTPase 2 2 2
MIRT516120 SRPX2 sushi repeat containing protein, X-linked 2 2 4
MIRT522126 NELL2 neural EGFL like 2 2 2
MIRT523018 IL1RAPL1 interleukin 1 receptor accessory protein like 1 2 4
MIRT524015 DONSON downstream neighbor of SON 2 2
MIRT526307 JAKMIP2 janus kinase and microtubule interacting protein 2 2 2
MIRT526789 SGCD sarcoglycan delta 2 2
MIRT529141 CLCC1 chloride channel CLIC like 1 2 2
MIRT531336 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT531573 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT531831 MTPAP mitochondrial poly(A) polymerase 2 2
MIRT534994 PRR11 proline rich 11 2 6
MIRT535419 PDZD8 PDZ domain containing 8 2 2
MIRT535534 PAK2 p21 (RAC1) activated kinase 2 2 2
MIRT536649 INIP INTS3 and NABP interacting protein 2 2
MIRT543498 MDM2 MDM2 proto-oncogene 2 4
MIRT545392 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545881 ZNF200 zinc finger protein 200 2 4
MIRT547931 HNRNPR heterogeneous nuclear ribonucleoprotein R 2 2
MIRT548109 GDAP2 ganglioside induced differentiation associated protein 2 2 2
MIRT549370 ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 2 2
MIRT549934 RPL7L1 ribosomal protein L7 like 1 2 4
MIRT550455 MYADM myeloid associated differentiation marker 2 4
MIRT550640 AR androgen receptor 2 2
MIRT550815 FAM229B family with sequence similarity 229 member B 2 2
MIRT551258 OPCML opioid binding protein/cell adhesion molecule like 2 2
MIRT551768 MED21 mediator complex subunit 21 2 2
MIRT552214 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT555472 POGZ pogo transposable element derived with ZNF domain 2 2
MIRT556008 MZT1 mitotic spindle organizing protein 1 2 2
MIRT557878 FEM1B fem-1 homolog B 2 4
MIRT558486 DBN1 drebrin 1 2 2
MIRT560859 GAL3ST3 galactose-3-O-sulfotransferase 3 2 2
MIRT561521 AZF1 azoospermia factor 1 2 2
MIRT562090 KIAA0895 KIAA0895 2 2
MIRT563065 ZNF28 zinc finger protein 28 2 2
MIRT563487 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT564286 CTCF CCCTC-binding factor 2 2
MIRT565627 SLC16A1 solute carrier family 16 member 1 2 2
MIRT566508 PAWR pro-apoptotic WT1 regulator 2 2
MIRT566978 LBR lamin B receptor 2 2
MIRT567180 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT568432 GDNF glial cell derived neurotrophic factor 2 2
MIRT570092 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 2
MIRT570565 PABPC1 poly(A) binding protein cytoplasmic 1 2 2
MIRT571385 JKAMP JNK1/MAPK8-associated membrane protein 2 2
MIRT572053 GPATCH8 G-patch domain containing 8 2 2
MIRT572333 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT574528 PEG10 paternally expressed 10 2 2
MIRT575818 Igfbp4 insulin-like growth factor binding protein 4 2 2
MIRT608587 PPP2R1B protein phosphatase 2 scaffold subunit Abeta 2 4
MIRT610442 TSPAN15 tetraspanin 15 2 2
MIRT614994 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT615014 ERGIC2 ERGIC and golgi 2 2 2
MIRT615078 CISD3 CDGSH iron sulfur domain 3 2 2
MIRT616180 SYT7 synaptotagmin 7 2 2
MIRT617191 CDH13 cadherin 13 2 2
MIRT617287 GTF2H3 general transcription factor IIH subunit 3 2 2
MIRT618714 ESD esterase D 2 2
MIRT621825 TIMM8B translocase of inner mitochondrial membrane 8 homolog B 2 2
MIRT624139 DLX3 distal-less homeobox 3 2 2
MIRT625991 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT626344 BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 2 2
MIRT634899 ZNF701 zinc finger protein 701 2 2
MIRT637848 SLC2A9 solute carrier family 2 member 9 2 2
MIRT639514 FYB FYN binding protein 1 2 2
MIRT642468 RSL1D1 ribosomal L1 domain containing 1 2 2
MIRT653670 SLC26A7 solute carrier family 26 member 7 2 2
MIRT655192 PHAX phosphorylated adaptor for RNA export 2 2
MIRT657011 KCNMB4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 2 2
MIRT661008 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT665816 TMEM161B transmembrane protein 161B 2 2
MIRT683852 ZNF208 zinc finger protein 208 2 2
MIRT700436 PURB purine rich element binding protein B 2 2
MIRT700517 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4307 Tripterygium wilfordii Hook F resistant tissue
hsa-miR-4307 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4307 Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4307 Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine sensitive cell line (Bats-72)

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