miRTarBase - #MIRT442943


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pre-miRNA Information
pre-miRNA hsa-mir-570   
Genomic Coordinates chr3: 195699401 - 195699497
Synonyms MIRN570, hsa-mir-570, MIR570
Description Homo sapiens miR-570 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies . The 5' end of the miRNA may be offset with respect to previous annotations.
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-570-3p
Sequence 60| CGAAAACAGCAAUUACCUUUGC |81
Evidence Experimental
Experiments SAGE
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 5 3 + 195699464 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs562192952 1 dbSNP
rs772001684 2 dbSNP
rs1429248332 7 dbSNP
rs372336246 8 dbSNP
rs1435829348 10 dbSNP
rs1372443221 12 dbSNP
rs1484195269 17 dbSNP
rs1446121044 19 dbSNP
rs761215764 20 dbSNP
rs764570717 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
B92RKB miR-570 Predictive Biomarker (PRD) Transcriptomic Data . . . .
Gene Information
Gene Symbol C17orf105   
Synonyms -
Description chromosome 17 open reading frame 105
Transcript NM_001136483   
Expression
Putative miRNA Targets on C17orf105
3'UTR of C17orf105
(miRNA target sites are highlighted)		 
>C17orf105|NM_001136483|3'UTR
   1 GTTACTCACCATGGAAAAGATACAAGAGAAGGCCCTAGGATTTCTTGGCTGCTCAGGATCTCAAGACACTCCCGACTGGC
  81 TGAATGCTCCATCTTCAGATGCTTCAATAAAGCTTGGAACATAAAATGCGTAAGTTACATTTAGGGGACCCAAAGGCTTT
 161 ATGTTCTCATTCCAAAATGGGGCAGGCAGAAGGAAAGATGCAATGAGCATTTTTATTTGGGGCTATGAAAAGAAGTTTTA
 241 ACGAGAGAGAGAGAGAGAAATCTGAGAGAACTCTTTAAAACATACACCATCATCACCATCCCGTGGAAGAAGAAAAGCTG
 321 GGGTGAGATCATCCAGCCACAAGTACAGCACTGTCAAAATGGAAAACGAAATCACATGACAACATCAAGGTTCAGAAAAC
 401 ACAAGGAACAAATGCCATTAGTTCCTCTGTGAATACACACGATCG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cgUUUCCAUUAACGACAAAAGc 5'
            |||||   ||  |||| || 
Target 5' ccAAAGG--CTTTATGTTCTCa 3'
 150 - 169 124.00 -7.80
2 
miRNA  3' cgUUUCCAUUAACGACAAAAGc 5'
            :||||   | |  | |||| 
Target 5' gaGAAGGCCCTAG--GATTTCt 3'
 26 - 45 91.00 -5.70
3 
miRNA  3' cgUUUCCAUU-AACG--AC----AAAAGc 5'
            :|||| ||  |||  ||    ||||: 
Target 5' caGAAGGAAAGATGCAATGAGCATTTTTa 3'
 187 - 215 90.00 -7.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN15667632 71 COSMIC
COSN15359197 221 COSMIC
COSN7435764 462 COSMIC
COSN23124500 747 COSMIC
COSN16845448 1026 COSMIC
COSN29810163 1132 COSMIC
COSN24518373 1147 COSMIC
COSN16783710 1169 COSMIC
COSN32012180 1370 COSMIC
COSN29742848 1409 COSMIC
COSN24869109 1463 COSMIC
COSN18759845 1549 COSMIC
COSN23672159 1594 COSMIC
COSN14858321 1786 COSMIC
COSN26330010 2187 COSMIC
COSN8836968 2199 COSMIC
COSN23742454 2383 COSMIC
COSN15017687 2581 COSMIC
COSN17764408 2937 COSMIC
COSN27250519 3090 COSMIC
COSN27297372 3090 COSMIC
COSN27582663 3090 COSMIC
COSN21556042 3108 COSMIC
COSN23027255 3235 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1052935707 1 dbSNP
rs1263133286 4 dbSNP
rs148379784 5 dbSNP
rs998098025 6 dbSNP
rs567974747 10 dbSNP
rs754999825 14 dbSNP
rs756060150 18 dbSNP
rs1437600615 21 dbSNP
rs766347147 27 dbSNP
rs1164192424 28 dbSNP
rs753808914 30 dbSNP
rs1425508553 33 dbSNP
rs1164218249 35 dbSNP
rs1005180822 50 dbSNP
rs1468810460 52 dbSNP
rs1047620613 58 dbSNP
rs1483399507 71 dbSNP
rs1016617831 72 dbSNP
rs1219572950 78 dbSNP
rs571483985 79 dbSNP
rs1453539690 84 dbSNP
rs961124910 97 dbSNP
rs55705160 98 dbSNP
rs1328248998 100 dbSNP
rs1286342907 102 dbSNP
rs1244535005 107 dbSNP
rs1024947622 113 dbSNP
rs1273722221 114 dbSNP
rs1433758253 118 dbSNP
rs919421470 119 dbSNP
rs960520256 120 dbSNP
rs1413684770 129 dbSNP
rs1471832104 131 dbSNP
rs905195867 138 dbSNP
rs753173018 139 dbSNP
rs556906600 145 dbSNP
rs1161918007 146 dbSNP
rs1419225573 150 dbSNP
rs1473211874 151 dbSNP
rs758357257 160 dbSNP
rs758812039 161 dbSNP
rs1479077026 163 dbSNP
rs1349408241 173 dbSNP
rs1247461429 175 dbSNP
rs781246684 177 dbSNP
rs1464221908 180 dbSNP
rs1310109800 185 dbSNP
rs115014002 187 dbSNP
rs1317444446 195 dbSNP
rs538394349 205 dbSNP
rs1277876761 213 dbSNP
rs1021096280 221 dbSNP
rs934745737 221 dbSNP
rs865932023 229 dbSNP
rs1356776191 235 dbSNP
rs1363396273 244 dbSNP
rs778100538 250 dbSNP
rs1458134426 258 dbSNP
rs987188987 262 dbSNP
rs553810813 264 dbSNP
rs571979293 268 dbSNP
rs1174601680 275 dbSNP
rs1416205717 276 dbSNP
rs1314332114 277 dbSNP
rs1425969575 291 dbSNP
rs1287605583 297 dbSNP
rs943044226 301 dbSNP
rs536259146 312 dbSNP
rs973510891 313 dbSNP
rs1250211132 316 dbSNP
rs1320645223 321 dbSNP
rs998463656 326 dbSNP
rs920508761 336 dbSNP
rs1049588677 360 dbSNP
rs554238948 370 dbSNP
rs929234257 372 dbSNP
rs889673209 374 dbSNP
rs1313372409 377 dbSNP
rs1047568884 380 dbSNP
rs1227105317 382 dbSNP
rs1280436561 382 dbSNP
rs576288109 386 dbSNP
rs1299429215 388 dbSNP
rs115872287 390 dbSNP
rs1180989384 394 dbSNP
rs1301535842 421 dbSNP
rs7215012 424 dbSNP
rs993925881 428 dbSNP
rs905311119 429 dbSNP
rs1427954410 434 dbSNP
rs769464839 440 dbSNP
rs755663729 443 dbSNP
rs1456662991 445 dbSNP
rs1169487382 452 dbSNP
rs1428848728 453 dbSNP
rs1032780509 456 dbSNP
rs960490733 457 dbSNP
rs992923191 459 dbSNP
rs916095695 460 dbSNP
rs577107912 465 dbSNP
rs1258218303 472 dbSNP
rs1203785454 475 dbSNP
rs1481800702 476 dbSNP
rs970262624 481 dbSNP
rs979008640 484 dbSNP
rs925965647 494 dbSNP
rs1321441418 499 dbSNP
rs1429420146 501 dbSNP
rs934690899 507 dbSNP
rs779636779 508 dbSNP
rs545544191 511 dbSNP
rs922636267 520 dbSNP
rs1408020464 521 dbSNP
rs894032831 522 dbSNP
rs560653340 526 dbSNP
rs1282379497 530 dbSNP
rs1049561151 539 dbSNP
rs748898610 541 dbSNP
rs555081425 543 dbSNP
rs1425375094 556 dbSNP
rs527758132 564 dbSNP
rs754478913 569 dbSNP
rs1021044094 581 dbSNP
rs1228513587 596 dbSNP
rs1471286151 597 dbSNP
rs1038330709 604 dbSNP
rs896817416 614 dbSNP
rs779284614 619 dbSNP
rs543014121 620 dbSNP
rs73985105 629 dbSNP
rs1017298833 630 dbSNP
rs1278860528 636 dbSNP
rs964844565 640 dbSNP
rs1227093438 646 dbSNP
rs1352348398 653 dbSNP
rs1307779827 657 dbSNP
rs973071488 664 dbSNP
rs1388806901 681 dbSNP
rs74371596 686 dbSNP
rs929207342 694 dbSNP
rs1237417545 707 dbSNP
rs1023072632 710 dbSNP
rs1475996032 712 dbSNP
rs1414185202 715 dbSNP
rs983372590 716 dbSNP
rs746273719 719 dbSNP
rs1033717046 732 dbSNP
rs1264762130 732 dbSNP
rs1267903250 732 dbSNP
rs137968559 732 dbSNP
rs762446575 732 dbSNP
rs978974193 732 dbSNP
rs1388476340 733 dbSNP
rs1331834344 735 dbSNP
rs1261864808 744 dbSNP
rs550059798 747 dbSNP
rs949856479 749 dbSNP
rs574959045 750 dbSNP
rs1044281042 752 dbSNP
rs748081458 766 dbSNP
rs1404558521 772 dbSNP
rs905258351 782 dbSNP
rs1319642821 792 dbSNP
rs141559382 793 dbSNP
rs1387022389 798 dbSNP
rs1001251253 799 dbSNP
rs1465071872 805 dbSNP
rs1375431177 807 dbSNP
rs75436311 813 dbSNP
rs117962974 815 dbSNP
rs1247100576 827 dbSNP
rs1187032435 834 dbSNP
rs565790204 853 dbSNP
rs1262997407 857 dbSNP
rs535919927 858 dbSNP
rs1299693429 866 dbSNP
rs911044918 870 dbSNP
rs941214873 897 dbSNP
rs1009735554 900 dbSNP
rs1038209776 907 dbSNP
rs1328009028 915 dbSNP
rs897029937 916 dbSNP
rs1395394664 917 dbSNP
rs1042614993 918 dbSNP
rs890739808 928 dbSNP
rs1314171364 930 dbSNP
rs1434840943 931 dbSNP
rs572829844 934 dbSNP
rs1009006134 935 dbSNP
rs1476556522 940 dbSNP
rs1374007312 945 dbSNP
rs1187356689 947 dbSNP
rs771014191 955 dbSNP
rs1441190101 962 dbSNP
rs964465938 963 dbSNP
rs554556537 970 dbSNP
rs1346606134 975 dbSNP
rs929923925 977 dbSNP
rs1272709691 987 dbSNP
rs569656302 992 dbSNP
rs187741616 1013 dbSNP
rs368384439 1016 dbSNP
rs34814687 1017 dbSNP
rs1338593580 1021 dbSNP
rs116541278 1024 dbSNP
rs78364015 1026 dbSNP
rs41455049 1031 dbSNP
rs572514175 1041 dbSNP
rs1163010218 1042 dbSNP
rs927131353 1043 dbSNP
rs1379598778 1050 dbSNP
rs372615811 1052 dbSNP
rs938075389 1058 dbSNP
rs1189313978 1067 dbSNP
rs989095229 1072 dbSNP
rs542746731 1073 dbSNP
rs1207451449 1075 dbSNP
rs915365151 1076 dbSNP
rs1289480573 1084 dbSNP
rs1424247026 1085 dbSNP
rs1457553169 1102 dbSNP
rs538816177 1108 dbSNP
rs112634663 1110 dbSNP
rs1166207561 1110 dbSNP
rs1354020984 1110 dbSNP
rs1397153162 1110 dbSNP
rs1403918248 1110 dbSNP
rs144276030 1110 dbSNP
rs545561689 1110 dbSNP
rs985534051 1110 dbSNP
rs1322493080 1111 dbSNP
rs1386311842 1113 dbSNP
rs1457161155 1114 dbSNP
rs1433716387 1120 dbSNP
rs1323581159 1122 dbSNP
rs1332307615 1124 dbSNP
rs1042397812 1125 dbSNP
rs1230693105 1127 dbSNP
rs1178990198 1128 dbSNP
rs1470581102 1129 dbSNP
rs1197063678 1132 dbSNP
rs1246292914 1132 dbSNP
rs1274798611 1134 dbSNP
rs62078651 1134 dbSNP
rs769030844 1139 dbSNP
rs1328351997 1142 dbSNP
rs546067510 1143 dbSNP
rs1224921480 1145 dbSNP
rs1273815182 1147 dbSNP
rs890687630 1147 dbSNP
rs974284796 1150 dbSNP
rs1372792019 1152 dbSNP
rs1161939806 1154 dbSNP
rs1466871788 1154 dbSNP
rs57998013 1154 dbSNP
rs762276596 1154 dbSNP
rs771354077 1154 dbSNP
rs531577812 1159 dbSNP
rs929866622 1162 dbSNP
rs1039170553 1164 dbSNP
rs397944365 1167 dbSNP
rs1056414467 1169 dbSNP
rs1194008940 1169 dbSNP
rs1253912957 1169 dbSNP
rs1455743289 1169 dbSNP
rs1240246150 1171 dbSNP
rs75723816 1173 dbSNP
rs1464790768 1177 dbSNP
rs1316931679 1210 dbSNP
rs995058410 1214 dbSNP
rs1027809683 1216 dbSNP
rs1210942074 1219 dbSNP
rs950476467 1232 dbSNP
rs1004534527 1236 dbSNP
rs1023996943 1251 dbSNP
rs1231522964 1252 dbSNP
rs1449903653 1258 dbSNP
rs1349558534 1263 dbSNP
rs971273658 1275 dbSNP
rs763448139 1276 dbSNP
rs867028132 1285 dbSNP
rs1363502711 1291 dbSNP
rs980433889 1311 dbSNP
rs565251871 1312 dbSNP
rs1359164041 1329 dbSNP
rs547950858 1342 dbSNP
rs1436717467 1348 dbSNP
rs1395870617 1353 dbSNP
rs1168235089 1356 dbSNP
rs990030484 1362 dbSNP
rs1472813488 1363 dbSNP
rs903576639 1365 dbSNP
rs1409679568 1367 dbSNP
rs760102260 1371 dbSNP
rs1163768154 1373 dbSNP
rs915296603 1374 dbSNP
rs1392308487 1383 dbSNP
rs945485677 1395 dbSNP
rs547972450 1397 dbSNP
rs911902272 1399 dbSNP
rs944922402 1402 dbSNP
rs12601060 1403 dbSNP
rs1486378797 1408 dbSNP
rs900787755 1408 dbSNP
rs891986709 1409 dbSNP
rs1204006109 1410 dbSNP
rs930794141 1415 dbSNP
rs139270720 1418 dbSNP
rs1215565776 1423 dbSNP
rs886167881 1424 dbSNP
rs192735557 1441 dbSNP
rs1416659041 1442 dbSNP
rs1023942870 1459 dbSNP
rs962764427 1462 dbSNP
rs1428055379 1468 dbSNP
rs1356559804 1470 dbSNP
rs1172223362 1475 dbSNP
rs1428947405 1481 dbSNP
rs1412914802 1483 dbSNP
rs12601085 1498 dbSNP
rs537026677 1499 dbSNP
rs1475862986 1502 dbSNP
rs558561733 1507 dbSNP
rs1257616145 1519 dbSNP
rs1203889120 1530 dbSNP
rs1479436264 1531 dbSNP
rs1235696541 1532 dbSNP
rs1252754058 1532 dbSNP
rs1271751552 1532 dbSNP
rs35586550 1532 dbSNP
rs35787597 1532 dbSNP
rs397858023 1532 dbSNP
rs1354358969 1533 dbSNP
rs918405436 1535 dbSNP
rs570765292 1536 dbSNP
rs1389782443 1549 dbSNP
rs1252817614 1550 dbSNP
rs1484124946 1551 dbSNP
rs1180273053 1558 dbSNP
rs1034670231 1570 dbSNP
rs534575910 1571 dbSNP
rs1162632103 1579 dbSNP
rs868491680 1586 dbSNP
rs1180798581 1587 dbSNP
rs1020092147 1593 dbSNP
rs966732597 1594 dbSNP
rs755088003 1595 dbSNP
rs1488328594 1596 dbSNP
rs1251512371 1597 dbSNP
rs1455964382 1601 dbSNP
rs553175903 1613 dbSNP
rs912018569 1618 dbSNP
rs944699523 1619 dbSNP
rs974800258 1620 dbSNP
rs922159423 1623 dbSNP
rs376659418 1635 dbSNP
rs1162307148 1636 dbSNP
rs574543395 1638 dbSNP
rs1049667780 1640 dbSNP
rs886613222 1659 dbSNP
rs1307889892 1666 dbSNP
rs1431319380 1667 dbSNP
rs940381882 1669 dbSNP
rs536781586 1675 dbSNP
rs906985034 1677 dbSNP
rs554629611 1681 dbSNP
rs753503616 1682 dbSNP
rs1442895327 1689 dbSNP
rs1339155071 1690 dbSNP
rs754588326 1699 dbSNP
rs893017687 1716 dbSNP
rs1450917272 1717 dbSNP
rs1344406034 1721 dbSNP
rs1203331081 1730 dbSNP
rs947979434 1734 dbSNP
rs1432234876 1735 dbSNP
rs1274163314 1740 dbSNP
rs1480202287 1755 dbSNP
rs576092366 1757 dbSNP
rs986753916 1762 dbSNP
rs1195865341 1767 dbSNP
rs1044680182 1770 dbSNP
rs912526928 1771 dbSNP
rs1020038124 1773 dbSNP
rs543432299 1774 dbSNP
rs1421929083 1777 dbSNP
rs564888566 1778 dbSNP
rs1390291888 1782 dbSNP
rs781251408 1783 dbSNP
rs577474618 1789 dbSNP
rs1236173971 1790 dbSNP
rs986632722 1809 dbSNP
rs1317484734 1810 dbSNP
rs541348894 1811 dbSNP
rs1387138264 1817 dbSNP
rs1288915911 1819 dbSNP
rs1018975072 1822 dbSNP
rs1392821142 1823 dbSNP
rs778560011 1826 dbSNP
rs559940982 1827 dbSNP
rs748098394 1828 dbSNP
rs758357029 1831 dbSNP
rs530208186 1832 dbSNP
rs1304897641 1837 dbSNP
rs548298388 1840 dbSNP
rs1263095985 1843 dbSNP
rs891355058 1851 dbSNP
rs921970560 1854 dbSNP
rs777735459 1867 dbSNP
rs1396032025 1886 dbSNP
rs1484749351 1890 dbSNP
rs1282655175 1895 dbSNP
rs985042707 1897 dbSNP
rs1007167195 1903 dbSNP
rs147284628 1905 dbSNP
rs1225014377 1906 dbSNP
rs748031944 1906 dbSNP
rs1296238849 1907 dbSNP
rs1413591866 1910 dbSNP
rs1373102541 1912 dbSNP
rs940831960 1922 dbSNP
rs1226212288 1924 dbSNP
rs1045958215 1927 dbSNP
rs928353518 1928 dbSNP
rs1297189048 1939 dbSNP
rs1314271945 1941 dbSNP
rs995990038 1942 dbSNP
rs1395411126 1944 dbSNP
rs547078189 1958 dbSNP
rs1210577358 1968 dbSNP
rs1055838114 1983 dbSNP
rs570426333 1992 dbSNP
rs991970213 1993 dbSNP
rs1024774466 2012 dbSNP
rs969252132 2014 dbSNP
rs1188827380 2015 dbSNP
rs1482831936 2023 dbSNP
rs892807380 2025 dbSNP
rs539006257 2026 dbSNP
rs552213763 2038 dbSNP
rs1341251961 2042 dbSNP
rs1251752661 2047 dbSNP
rs1041610629 2051 dbSNP
rs1353552178 2064 dbSNP
rs1294591599 2067 dbSNP
rs1414912462 2079 dbSNP
rs1418366242 2080 dbSNP
rs570456620 2081 dbSNP
rs936383076 2095 dbSNP
rs1326480205 2110 dbSNP
rs1433467672 2116 dbSNP
rs988292248 2123 dbSNP
rs1164726955 2127 dbSNP
rs1007997077 2128 dbSNP
rs913617778 2134 dbSNP
rs933079570 2141 dbSNP
rs1051242396 2147 dbSNP
rs559190861 2150 dbSNP
rs1439282989 2153 dbSNP
rs1212909800 2154 dbSNP
rs942919375 2154 dbSNP
rs140766602 2156 dbSNP
rs996284120 2160 dbSNP
rs1275027335 2182 dbSNP
rs1029369024 2183 dbSNP
rs546556964 2192 dbSNP
rs898489819 2198 dbSNP
rs984823668 2205 dbSNP
rs1336048277 2213 dbSNP
rs1325608217 2215 dbSNP
rs908111388 2219 dbSNP
rs1299436129 2232 dbSNP
rs1026071159 2233 dbSNP
rs962309671 2243 dbSNP
rs981582334 2267 dbSNP
rs564134222 2272 dbSNP
rs569503695 2272 dbSNP
rs1310236830 2280 dbSNP
rs1160431131 2296 dbSNP
rs1470633785 2303 dbSNP
rs1394750524 2312 dbSNP
rs568281062 2330 dbSNP
rs969221847 2333 dbSNP
rs1254740748 2339 dbSNP
rs1268695750 2340 dbSNP
rs535307605 2348 dbSNP
rs1206726144 2356 dbSNP
rs1281517882 2362 dbSNP
rs1032258828 2364 dbSNP
rs1350912117 2367 dbSNP
rs1055547789 2371 dbSNP
rs958196814 2399 dbSNP
rs1192620142 2406 dbSNP
rs769930241 2412 dbSNP
rs1373656688 2413 dbSNP
rs556708786 2414 dbSNP
rs947043240 2429 dbSNP
rs1344018004 2440 dbSNP
rs570834167 2441 dbSNP
rs1401409746 2443 dbSNP
rs1375022444 2447 dbSNP
rs749043064 2449 dbSNP
rs775483831 2450 dbSNP
rs913578101 2458 dbSNP
rs1456171296 2461 dbSNP
rs1191624041 2462 dbSNP
rs942787767 2464 dbSNP
rs1475023880 2470 dbSNP
rs1240331904 2484 dbSNP
rs1217244386 2491 dbSNP
rs1488347196 2506 dbSNP
rs933066818 2509 dbSNP
rs987250604 2525 dbSNP
rs1159015646 2530 dbSNP
rs1349677250 2534 dbSNP
rs903084852 2536 dbSNP
rs1008112958 2542 dbSNP
rs942886643 2544 dbSNP
rs114803856 2552 dbSNP
rs1438639528 2556 dbSNP
rs1292030458 2561 dbSNP
rs931568046 2566 dbSNP
rs1345042495 2567 dbSNP
rs899666610 2574 dbSNP
rs997121767 2576 dbSNP
rs7213802 2580 dbSNP
rs1176489493 2581 dbSNP
rs1409175521 2592 dbSNP
rs1330941663 2599 dbSNP
rs952256121 2620 dbSNP
rs1188213613 2622 dbSNP
rs764543872 2630 dbSNP
rs1006204786 2633 dbSNP
rs1256181842 2645 dbSNP
rs1185251805 2659 dbSNP
rs1321818102 2661 dbSNP
rs1486431896 2664 dbSNP
rs1223076897 2666 dbSNP
rs144419704 2675 dbSNP
rs1306158463 2681 dbSNP
rs1275651339 2684 dbSNP
rs1490069101 2684 dbSNP
rs1355456353 2685 dbSNP
rs905032606 2690 dbSNP
rs962258830 2691 dbSNP
rs981697037 2698 dbSNP
rs928922292 2699 dbSNP
rs1177156623 2705 dbSNP
rs1415103743 2710 dbSNP
rs957957747 2712 dbSNP
rs1168159478 2719 dbSNP
rs138113656 2726 dbSNP
rs1009922541 2733 dbSNP
rs142639187 2733 dbSNP
rs958895203 2736 dbSNP
rs954396617 2737 dbSNP
rs1365022644 2755 dbSNP
rs1256374403 2758 dbSNP
rs9899746 2759 dbSNP
rs910266119 2761 dbSNP
rs1234956875 2769 dbSNP
rs964466766 2784 dbSNP
rs1199704106 2794 dbSNP
rs574997400 2799 dbSNP
rs1334739960 2806 dbSNP
rs947159372 2810 dbSNP
rs559778054 2823 dbSNP
rs575041419 2825 dbSNP
rs542446512 2828 dbSNP
rs1322406734 2831 dbSNP
rs977030176 2833 dbSNP
rs1352155779 2834 dbSNP
rs1222272944 2836 dbSNP
rs879003127 2836 dbSNP
rs148487685 2847 dbSNP
rs530666345 2853 dbSNP
rs924290407 2854 dbSNP
rs1333085879 2856 dbSNP
rs552301061 2870 dbSNP
rs568195315 2871 dbSNP
rs540676848 2879 dbSNP
rs553917395 2880 dbSNP
rs1229555187 2883 dbSNP
rs1368525906 2884 dbSNP
rs376668144 2887 dbSNP
rs1416904081 2889 dbSNP
rs932486777 2890 dbSNP
rs1179594820 2894 dbSNP
rs949425295 2902 dbSNP
rs546542945 2910 dbSNP
rs1251601863 2914 dbSNP
rs905252002 2925 dbSNP
rs1489128943 2930 dbSNP
rs1260219918 2937 dbSNP
rs76458117 2938 dbSNP
rs1482295190 2940 dbSNP
rs767906674 2941 dbSNP
rs142720395 2956 dbSNP
rs753497114 2958 dbSNP
rs897831004 2960 dbSNP
rs1002910075 2965 dbSNP
rs1474092077 2967 dbSNP
rs893660481 2969 dbSNP
rs1301088167 2973 dbSNP
rs1388441941 2976 dbSNP
rs12602800 2977 dbSNP
rs73985106 2978 dbSNP
rs1451020667 2981 dbSNP
rs991648407 2983 dbSNP
rs1158876220 2990 dbSNP
rs1454060454 2991 dbSNP
rs568702441 2992 dbSNP
rs1008536034 2993 dbSNP
rs1408005589 2997 dbSNP
rs1327875245 3016 dbSNP
rs1434230493 3017 dbSNP
rs1359516310 3020 dbSNP
rs1450210047 3022 dbSNP
rs1203416305 3027 dbSNP
rs1312796665 3029 dbSNP
rs1017291982 3033 dbSNP
rs1286927221 3034 dbSNP
rs1210456445 3043 dbSNP
rs1346071295 3048 dbSNP
rs1381431299 3057 dbSNP
rs112085164 3063 dbSNP
rs1191670457 3063 dbSNP
rs144506245 3063 dbSNP
rs540398855 3063 dbSNP
rs1263984033 3069 dbSNP
rs1430324189 3069 dbSNP
rs964431177 3071 dbSNP
rs1228437716 3076 dbSNP
rs973582851 3076 dbSNP
rs1022226685 3078 dbSNP
rs1201923196 3079 dbSNP
rs968407341 3079 dbSNP
rs977144884 3086 dbSNP
rs548081491 3099 dbSNP
rs764850865 3102 dbSNP
rs943697832 3103 dbSNP
rs1279863273 3105 dbSNP
rs953025756 3109 dbSNP
rs1225132707 3114 dbSNP
rs1319998583 3120 dbSNP
rs1278246979 3127 dbSNP
rs796609922 3134 dbSNP
rs976851393 3137 dbSNP
rs558602249 3138 dbSNP
rs932579044 3148 dbSNP
rs908748831 3150 dbSNP
rs1396246905 3151 dbSNP
rs1166579381 3155 dbSNP
rs1467615073 3161 dbSNP
rs949645305 3164 dbSNP
rs1048196867 3165 dbSNP
rs752208702 3168 dbSNP
rs570856564 3173 dbSNP
rs1036441965 3175 dbSNP
rs1188518878 3176 dbSNP
rs534722202 3178 dbSNP
rs1002858277 3179 dbSNP
rs545806675 3180 dbSNP
rs1388565690 3196 dbSNP
rs1459018886 3201 dbSNP
rs1475244084 3201 dbSNP
rs1036119344 3209 dbSNP
rs1232112230 3215 dbSNP
rs1332040766 3220 dbSNP
rs1285531819 3221 dbSNP
rs1054315138 3232 dbSNP
rs893639721 3235 dbSNP
rs553286459 3236 dbSNP
rs1449491063 3237 dbSNP
rs1401609504 3242 dbSNP
rs758443769 3249 dbSNP
rs1415942821 3254 dbSNP
rs1009777203 3257 dbSNP
rs189905187 3258 dbSNP
rs1163974789 3261 dbSNP
rs1469787306 3267 dbSNP
rs1334644099 3273 dbSNP
rs542534169 3275 dbSNP
rs1362331200 3276 dbSNP
rs777615917 3278 dbSNP
rs1042233607 3282 dbSNP
rs1213006138 3283 dbSNP
rs1013596065 3284 dbSNP
rs1021710822 3285 dbSNP
rs557638181 3292 dbSNP
rs1325027593 3303 dbSNP
rs977591509 3306 dbSNP
rs1031367706 3312 dbSNP
rs1209964111 3315 dbSNP
rs1324168024 3322 dbSNP
rs1429639842 3326 dbSNP
rs151006328 3327 dbSNP
rs1378123610 3328 dbSNP
rs976418928 3329 dbSNP
rs1017260579 3334 dbSNP
rs191720482 3335 dbSNP
rs1222024643 3341 dbSNP
rs953952927 3344 dbSNP
rs1324260923 3366 dbSNP
rs900196688 3370 dbSNP
rs564042413 3374 dbSNP
rs909839343 3376 dbSNP
rs1211113049 3394 dbSNP
rs1380669272 3403 dbSNP
rs1406109368 3411 dbSNP
rs994585980 3419 dbSNP
rs939824234 3436 dbSNP
rs1036890432 3440 dbSNP
rs1198902269 3442 dbSNP
rs562464291 3443 dbSNP
rs938778520 3444 dbSNP
rs1057101292 3449 dbSNP
rs1354051156 3451 dbSNP
rs1280019719 3453 dbSNP
rs1232617333 3459 dbSNP
rs894471658 3462 dbSNP
rs1275996845 3470 dbSNP
rs1338945936 3473 dbSNP
rs1173912478 3482 dbSNP
rs1428317625 3485 dbSNP
rs1300178945 3488 dbSNP
rs1420535928 3491 dbSNP
rs1375113557 3494 dbSNP
rs1457766867 3496 dbSNP
rs1412574213 3498 dbSNP
rs1161243091 3519 dbSNP
rs757058517 3522 dbSNP
rs982358396 3523 dbSNP
rs926619333 3529 dbSNP
rs184638018 3533 dbSNP
rs1260395737 3535 dbSNP
rs1195259461 3536 dbSNP
rs531465029 3544 dbSNP
rs989500679 3553 dbSNP
rs140843886 3555 dbSNP
rs189051336 3564 dbSNP
rs915280320 3569 dbSNP
rs746084193 3570 dbSNP
rs1214483293 3576 dbSNP
rs1338091570 3588 dbSNP
rs769952552 3601 dbSNP
rs998958152 3602 dbSNP
rs1230817675 3627 dbSNP
rs1280140046 3629 dbSNP
rs1259469481 3633 dbSNP
rs1031816032 3635 dbSNP
rs1042587852 3642 dbSNP
rs890314645 3644 dbSNP
rs1350078672 3652 dbSNP
rs1445465349 3657 dbSNP
rs529191356 3661 dbSNP
rs780138428 3663 dbSNP
rs1409265875 3682 dbSNP
rs944591006 3683 dbSNP
rs1172130386 3704 dbSNP
rs182042807 3719 dbSNP
rs546150199 3720 dbSNP
rs900165671 3720 dbSNP
rs1292303844 3728 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000449302.3 | 3UTR | UUGGCAAUCACAAUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE38974 Chronic obstructive pulmonary disease 0.297 7.5e-2 0.126 2.7e-1 25 Click to see details
GSE28544 Breast cancer -0.297 7.9e-2 -0.363 4.1e-2 24 Click to see details
GSE17306 Multiple myeloma 0.162 1.3e-1 0.520 6.4e-5 49 Click to see details
GSE32688 Pancreatic cancer -0.19 1.5e-1 -0.217 1.2e-1 32 Click to see details
GSE26953 Aortic valvular endothelial cells -0.19 1.9e-1 -0.127 2.8e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.167 2.4e-1 -0.490 1.4e-2 20 Click to see details
GSE21687 Ependynoma primary tumors 0.071 2.9e-1 0.044 3.6e-1 64 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.318 3.0e-1 -0.500 2.0e-1 5 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.102 3.1e-1 0.516 4.1e-3 25 Click to see details
GSE38226 Liver fibrosis 0.046 4.2e-1 -0.044 4.2e-1 21 Click to see details
GSE28260 Renal cortex and medulla 0.049 4.4e-1 0.055 4.3e-1 13 Click to see details
GSE14794 Lymphoblastoid cells -0.002 4.9e-1 0.047 3.3e-1 90 Click to see details
GSE14794 Lymphoblastoid cells -0.002 4.9e-1 0.047 3.3e-1 90 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
LUSC 0.35 0.04 0.522 0 25 Click to see details
KICH 0.33 0.07 0.268 0.11 22 Click to see details
PAAD 0.827 0.09 0.350 0.33 4 Click to see details
PRAD -0.296 0.14 0.075 0.4 15 Click to see details
STAD -0.232 0.17 0.342 0.08 19 Click to see details
BLCA 0.38 0.18 0.381 0.18 8 Click to see details
HNSC 0.182 0.19 0.458 0.01 26 Click to see details
THCA 0.108 0.25 0.378 0.01 40 Click to see details
UCEC -0.171 0.26 0.282 0.14 16 Click to see details
KIRP -0.125 0.27 0.079 0.35 26 Click to see details
LIHC 0.079 0.3 0.454 0 46 Click to see details
BRCA 0.092 0.32 0.317 0.05 28 Click to see details
ESCA -0.168 0.36 -0.143 0.38 7 Click to see details
KIRC -0.045 0.4 0.210 0.12 32 Click to see details
KIRC -0.045 0.4 0.210 0.12 32 Click to see details
KIRC -0.045 0.4 0.210 0.12 32 Click to see details
KIRC -0.045 0.4 0.210 0.12 32 Click to see details
KIRC -0.045 0.4 0.210 0.12 32 Click to see details
166 hsa-miR-570-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT053484 CD274 CD274 molecule 2 2
MIRT056153 OTUD1 OTU deubiquitinase 1 2 2
MIRT057406 TNKS2 tankyrase 2 2 2
MIRT065096 SLC38A1 solute carrier family 38 member 1 2 2
MIRT073901 ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 2 8
MIRT074322 TNRC6A trinucleotide repeat containing 6A 2 8
MIRT077514 UBE2Z ubiquitin conjugating enzyme E2 Z 2 4
MIRT082532 CALM3 calmodulin 3 2 2
MIRT084575 BCL2L11 BCL2 like 11 2 4
MIRT092028 ABHD5 abhydrolase domain containing 5 2 6
MIRT099121 MYLIP myosin regulatory light chain interacting protein 2 8
MIRT102992 RBM33 RNA binding motif protein 33 2 8
MIRT105434 ATP6V1B2 ATPase H+ transporting V1 subunit B2 2 10
MIRT109568 KLHL15 kelch like family member 15 2 2
MIRT145281 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT150161 MIDN midnolin 2 2
MIRT167432 TRIP13 thyroid hormone receptor interactor 13 2 2
MIRT168486 HSPA1B heat shock protein family A (Hsp70) member 1B 2 4
MIRT172128 KLF10 Kruppel like factor 10 4 2
MIRT215596 SUB1 SUB1 homolog, transcriptional regulator 2 2
MIRT259928 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT274852 ATXN7L3B ataxin 7 like 3B 2 4
MIRT290491 C18ORF25 chromosome 18 open reading frame 25 2 2
MIRT290941 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 4
MIRT322703 BAG4 BCL2 associated athanogene 4 2 2
MIRT358568 CANX calnexin 2 2
MIRT381250 RMND5A required for meiotic nuclear division 5 homolog A 2 2
MIRT442077 NDRG1 N-myc downstream regulated 1 2 2
MIRT442943 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT444267 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT444365 TIMM8B translocase of inner mitochondrial membrane 8 homolog B 2 2
MIRT444863 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT444871 ISPD isoprenoid synthase domain containing 2 2
MIRT445077 CXXC4 CXXC finger protein 4 2 2
MIRT445717 NAP1L6 nucleosome assembly protein 1 like 6 2 2
MIRT445945 SCML4 Scm polycomb group protein like 4 2 2
MIRT446054 NR5A2 nuclear receptor subfamily 5 group A member 2 2 2
MIRT446704 FUT10 fucosyltransferase 10 2 2
MIRT446726 SPAG11A sperm associated antigen 11A 2 2
MIRT447147 HHIP hedgehog interacting protein 2 2
MIRT447566 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT448698 KLRC4 killer cell lectin like receptor C4 2 2
MIRT448778 GNA13 G protein subunit alpha 13 2 2
MIRT449290 GMNC geminin coiled-coil domain containing 2 2
MIRT449673 SOX3 SRY-box 3 2 2
MIRT450020 EPM2AIP1 EPM2A interacting protein 1 2 2
MIRT450089 OR2A4 olfactory receptor family 2 subfamily A member 4 2 2
MIRT450209 PAIP1 poly(A) binding protein interacting protein 1 2 2
MIRT450271 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT450402 TMEM47 transmembrane protein 47 2 2
MIRT450419 BCL2L14 BCL2 like 14 2 2
MIRT450598 EXOC2 exocyst complex component 2 2 2
MIRT450821 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT453007 CCDC115 coiled-coil domain containing 115 2 17
MIRT453857 ZNF12 zinc finger protein 12 2 2
MIRT454706 HMGN1 high mobility group nucleosome binding domain 1 2 4
MIRT458699 LEPREL1 prolyl 3-hydroxylase 2 1 1
MIRT465144 TSC22D2 TSC22 domain family member 2 2 2
MIRT468216 SGK1 serum/glucocorticoid regulated kinase 1 2 2
MIRT469657 RAC1 Rac family small GTPase 1 2 2
MIRT470155 PSME3 proteasome activator subunit 3 2 2
MIRT470287 PRDX5 peroxiredoxin 5 2 2
MIRT470296 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT472433 NCBP2 nuclear cap binding protein subunit 2 2 2
MIRT472459 NASP nuclear autoantigenic sperm protein 2 2
MIRT475265 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 2
MIRT476735 FOXN2 forkhead box N2 2 2
MIRT476757 FOXK1 forkhead box K1 2 2
MIRT477549 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 2
MIRT478797 CRTAP cartilage associated protein 2 4
MIRT479661 CD164 CD164 molecule 2 4
MIRT479893 CCDC117 coiled-coil domain containing 117 2 4
MIRT480325 C5orf51 chromosome 5 open reading frame 51 2 2
MIRT481229 ATXN7L3 ataxin 7 like 3 2 2
MIRT484088 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT487507 GRK5 G protein-coupled receptor kinase 5 2 2
MIRT488356 PAX2 paired box 2 2 2
MIRT496746 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT496832 ZNF460 zinc finger protein 460 2 2
MIRT500913 STARD13 StAR related lipid transfer domain containing 13 2 4
MIRT502256 HNRNPF heterogeneous nuclear ribonucleoprotein F 2 4
MIRT504078 C9orf40 chromosome 9 open reading frame 40 2 6
MIRT504890 MRPL51 mitochondrial ribosomal protein L51 2 4
MIRT509834 TACR3 tachykinin receptor 3 2 4
MIRT511989 E2F8 E2F transcription factor 8 2 4
MIRT524543 CDC5L cell division cycle 5 like 2 4
MIRT526673 ZNF791 zinc finger protein 791 2 2
MIRT527410 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT528393 PGK1 phosphoglycerate kinase 1 2 2
MIRT529318 PDE5A phosphodiesterase 5A 2 2
MIRT529844 SMTN smoothelin 2 2
MIRT531461 TNFRSF10B TNF receptor superfamily member 10b 2 4
MIRT535096 PODXL podocalyxin like 2 2
MIRT535294 PHF6 PHD finger protein 6 2 2
MIRT537542 ETS1 ETS proto-oncogene 1, transcription factor 2 2
MIRT540200 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT543416 C5orf42 chromosome 5 open reading frame 42 2 2
MIRT543873 SLC16A9 solute carrier family 16 member 9 2 2
MIRT544393 SMC5 structural maintenance of chromosomes 5 2 2
MIRT544919 MBLAC2 metallo-beta-lactamase domain containing 2 2 2
MIRT546579 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT548834 CHD1 chromodomain helicase DNA binding protein 1 2 4
MIRT550787 WARS2 tryptophanyl tRNA synthetase 2, mitochondrial 2 2
MIRT553434 TPM3 tropomyosin 3 2 2
MIRT557467 GRB10 growth factor receptor bound protein 10 2 4
MIRT558065 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 2
MIRT558258 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT559205 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT561072 SRRM4 serine/arginine repetitive matrix 4 2 2
MIRT561805 PAPD5 poly(A) RNA polymerase D5, non-canonical 2 2
MIRT563875 PAGR1 PAXIP1 associated glutamate rich protein 1 2 4
MIRT565835 SCML2 Scm polycomb group protein like 2 2 2
MIRT568049 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT572820 MYO1C myosin IC 2 2
MIRT575423 Epg5 ectopic P-granules autophagy protein 5 homolog (C. elegans) 2 4
MIRT576435 Ccdc115 coiled-coil domain containing 115 2 10
MIRT576533 Txlna taxilin alpha 2 2
MIRT611715 EPG5 ectopic P-granules autophagy protein 5 homolog 2 5
MIRT612574 RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit 2 2
MIRT613945 IFIT3 interferon induced protein with tetratricopeptide repeats 3 2 2
MIRT614279 WSCD2 WSC domain containing 2 2 2
MIRT615194 CLUAP1 clusterin associated protein 1 2 2
MIRT627995 MTA3 metastasis associated 1 family member 3 2 2
MIRT637069 DENND2C DENN domain containing 2C 2 2
MIRT639912 SLIT1 slit guidance ligand 1 2 2
MIRT642026 MYADM myeloid associated differentiation marker 2 2
MIRT642844 SLC5A8 solute carrier family 5 member 8 2 2
MIRT643706 ZNF736 zinc finger protein 736 2 2
MIRT643835 RBMY1J RNA binding motif protein, Y-linked, family 1, member J 2 2
MIRT644775 RBMY1B RNA binding motif protein, Y-linked, family 1, member B 2 2
MIRT644778 RBMY1A1 RNA binding motif protein, Y-linked, family 1, member A1 2 2
MIRT644781 RBMY1D RNA binding motif protein, Y-linked, family 1, member D 2 2
MIRT644784 RBMY1E RNA binding motif protein, Y-linked, family 1, member E 2 2
MIRT647495 ZNF639 zinc finger protein 639 2 2
MIRT648248 RBMY1F RNA binding motif protein, Y-linked, family 1, member F 2 2
MIRT648633 LEMD2 LEM domain containing 2 2 2
MIRT654626 PTGFR prostaglandin F receptor 2 2
MIRT656345 MED28 mediator complex subunit 28 2 2
MIRT657354 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT659635 CDKN2AIP CDKN2A interacting protein 2 2
MIRT659651 CDH4 cadherin 4 2 2
MIRT660959 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT664139 ATP6V1G3 ATPase H+ transporting V1 subunit G3 2 2
MIRT666038 STRBP spermatid perinuclear RNA binding protein 2 2
MIRT666200 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT681712 GDF6 growth differentiation factor 6 2 2
MIRT683276 ZNF99 zinc finger protein 99 2 2
MIRT690312 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT691642 SLC43A3 solute carrier family 43 member 3 2 2
MIRT692270 GPR157 G protein-coupled receptor 157 2 2
MIRT692840 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT697820 UBQLN1 ubiquilin 1 2 2
MIRT698248 TMEM2 transmembrane protein 2 2 2
MIRT702755 IGF1R insulin like growth factor 1 receptor 2 2
MIRT702918 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT703411 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704857 CD46 CD46 molecule 2 2
MIRT711066 BTD biotinidase 2 2
MIRT717794 TGFBR2 transforming growth factor beta receptor 2 2 2
MIRT719676 SPDYE1 speedy/RINGO cell cycle regulator family member E1 2 2
MIRT720300 DDHD1 DDHD domain containing 1 2 2
MIRT723496 WDR33 WD repeat domain 33 2 2
MIRT723934 SVOP SV2 related protein 2 2
MIRT735586 FUT8 fucosyltransferase 8 2 0
MIRT735935 EYA3 EYA transcriptional coactivator and phosphatase 3 3 0
MIRT756075 HDAC1 histone deacetylase 1 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-570 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-570 5-aza-2'-deoxycytidine (5-Aza-CdR) + trichostatin A(TSA) NULL NULL Quantitative real-time PCR gastric cancer AGS cell lines 21960261 2011 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-570-3p Sorafenib 216239 NSC747971 approved sensitive High Hepatocellular Carcinoma cell line (HepG2, Hep-394, Hep-SWX, Huh-7)
hsa-miR-570-3p Doxorubicin 31703 NSC123127 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-570-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-570-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-570-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-570-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-570-3p Paclitaxel 36314 NSC125973 approved resistant cell line (SKVO3ip1)
hsa-miR-570-3p Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM17)
hsa-miR-570-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-570-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-570-3p Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-miR-570-3p Oxaliplatin 6857599 NSC266046 approved sensitive cell line (IGROV-1)
hsa-miR-570-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (IGROV-1)
hsa-miR-570-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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