miRTarBase - #MIRT443671


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pre-miRNA Information
pre-miRNA hsa-mir-371b   
Genomic Coordinates chr19: 53787677 - 53787742
Description Homo sapiens miR-371b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-371b-3p
Sequence 43| AAGUGCCCCCACAGUUUGAGUGC |65
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 2 19 - 53787699 16594986 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1345825760 2 dbSNP
rs922443786 5 dbSNP
rs773769548 6 dbSNP
rs1034874198 8 dbSNP
rs772543475 9 dbSNP
rs1318684148 10 dbSNP
rs1004685112 12 dbSNP
rs1402402708 12 dbSNP
rs1427092890 13 dbSNP
rs1202234248 14 dbSNP
rs770734168 14 dbSNP
rs1428290628 15 dbSNP
rs1480794990 15 dbSNP
rs1049004182 17 dbSNP
rs1185000692 19 dbSNP
rs748499899 22 dbSNP
rs1487511363 23 dbSNP
Putative Targets

Gene Information
Gene Symbol FLT1   
Synonyms FLT, FLT-1, VEGFR-1, VEGFR1
Description fms related tyrosine kinase 1
Transcript NM_001159920   
Other Transcripts NM_001160030 , NM_001160031 , NM_002019   
Expression
Putative miRNA Targets on FLT1
3'UTR of FLT1
(miRNA target sites are highlighted)		 
>FLT1|NM_001159920|3'UTR
   1 AGGACTCATTAAAAAGTAACAGTTGTCTCATATCATCTTGATTTATTGTCACTGTTGCTAACTTTCAGGCTCGGAGGAGA
  81 TGCTCCTCCCAAAATGAGTTCGGAGATGATAGCAGTAATAATGAGACCCCCGGGCCCCAGCTCTGGGCCCCCCATTCAGG
 161 CCGAGGGGGCTGCTCCGGGGGGCCGACTTGGTGCACGTTTGGATTTGGAGGATCCCTGCACTGCCTTCTCTGTGTTTGTT
 241 GCTCTTGCTGTTTTCTCCTGCCTGATAAACAACAACTTGGGATGATCCTTTCCTTCCATTTTGATGCCAACCTCTTTTTA
 321 TTTTTAAGTGTTGAAGCTGCACAAACTGAATAATTTAAACAAATGCTGGTTTCTGCCAAAGATGGACACGAATAAGTTAA
 401 TTTTCCAGCTCAGAATGAGTACAGTTGAATTTGAGACTCTGTCGGACTTCTGCCTGGTTTTATTTGGGACTATTTCATCT
 481 GCTCTTGATTTGTAAATAGCACCTGGATAGCAAGTTATAATGCTTATTTATTTGAAAATGCTTTTTTTTTTTTTACGTTA
 561 AGCACATTTATCTTGAACTGGAGCTTCTAAAATGGGCCCCAGGGGTGCAAGATGTTGGTGTAATTCAGAGATAGTAAAGG
 641 TTTATCGCAGTGTGAATTATAAGAGTCCATCCAAATCAACGTCCCCTCCCTCCTCTCATGCGATCCAGGTAATTATGCAG
 721 TTAGTGCCACAGTAGACTAGCCTAGCAAAGGGTTTGCTCCTTGCTGTCTCTGACTGCACCACACAGCTATTGATGGCAGC
 801 TGAAAGAAAGTGGATCATGCCTTAATTTTAAATATTCCTGTCCTCTGGTTATTATTTTAAGGAACTTCATCATGTTAAAA
 881 TGACAGCATTCAAAGGTGTACCACAATCAATTTATCAAGGAAATAAAGGCTATTGTAACCAGAGATTTAATGCATTCTTC
 961 TAAATGTAAATTTAAAATTTGCCCTTTAAAAAAGTCCACTTTCCCCATATGCAAATGTTAATAGGATTTTTATGGGGATT
1041 AAGAAGCGGCAAAACTACAGAAGCAGAATTCAAAGTAATTTAAAAAATACACACCAGTTTTAAATCAAGAGAAGTTGTAA
1121 TCTCTTGTTTTAAGCTTGCGTTTGAGGGAAAATGACTTTTTCACCAATTTAATATGCATTGTTCTGTTGTTTTTATTTAT
1201 GATTGATCATTATATGTGACTTGCATAAACTATTTAAAAAAAAAAACTATAATGACCAAAATAGCCATGGCTGAGAAACA
1281 CAGTGGCTGGGCAGTTCAATAGGAGGTGACAATATGACAACTTCTCAAGCTTGGGAACTCACCAGACTGTTTCCTCCTTT
1361 AGGTAACAGATTCTGTCCCACGGCTAAACTTGTCTTTCACGTGGGAATTGCTTTTGTCAAACGTGAAAGAGTAAACAATA
1441 GCATTTCCCCAGAATGCCAGTTTTATGGAGCCCCAAATGCTCTGAAAACAATTAGTAACCTGGAAGTTGTCAGCCCAAAG
1521 GAAAGAAAAATCAATTGTATCTTGAAATTTTACCTATGGCTCTTTGGCCTGGCTTCTTTGTTCATTATAAGTTAGTGTGT
1601 TCCTTCAGGAAACAATGCCTTAATACCATAGAACATGGGGGCCTTAATAGTTGCTAACATTAAAAAAGCAAACAGAATGA
1681 TTGAGGGATCCTTATGAAAACAAAATGGTGAATTGGACATGCAGAACCTACCATTTCCTTCCCCTGTTTGCAATTTTTGT
1761 GGGGAGGGGAGGATGTTAGTATTTACAAAAGATGATTTTAAGAACTTCCAAGAGATGAGTTTAAGAATTCCATAGAGTAT
1841 TAGTTGTTCACTGTGTAATTAATCCTTCCGGAGAGTCTTTTTTTTTTTTTTTAAAGAAACTTTTGGGTGGGTTTTGTTTT
1921 TTATTAGTTACCCTAGGGGTATGTTACCCTGGGGTATGAAGGGAGGTGAAGATAACGGAGGGGGGAGAAAAAAAAAAGGA
2001 GAAAAAAGGAGCCTAAAATGGGGAATAATTGAAATGGAACAGGGGGTGTGAGGCTGGTTCCTCAGTCCCCATTCCAAACG
2081 GAGGATAGAAGCTGTGTATTTATGTGACCTGGCAGATCTCTGGGGCCATAACACTGAAAAGTGAAAGAACCTGGTGGGCA
2161 GCTATCTTTGGCTACTGATAACCAGCAGAAATGTCTGTTAATTCTGATTTTCTCAATTTGAAGGGATCAGCTACACTGTT
2241 AAATTTTGGAAAGCCACTACCTACTTCCATCAAGTAACTTAGGTTTCGAAATATGGGTTCAACGCACCTCCCTTATTCAA
2321 AATGTCAAAATAGATTATTATAATGTATAAAGTAAGAATTGACAAAATATGATTCTTGGGTTGATTGGTCATTTAGAAAC
2401 TAGCCAAAAGTGAGACTTTTAATGTAGAACATTTTTCAGAAATGGGTACAAAGAAAAATGCATATTACTGTATATTTCAG
2481 AGTGTTTATGTGAACCTTGTATTTAATTGAGAGTCCCATGTACGTTCTGCAGCCTTTTTGCTGCTTCTATCATCTGAAGT
2561 TTGTGTAGTACAAATAAGGCCTTTGGGATTCTTAATGACATTTATGTTAAAATGTTCTCTTCTCTTTAAACACCGTTTTC
2641 CAATCCACCTGTCAGGGAGTCCAAATCGTGTCTGTGTTGATGATGCTATACTTTGTAGCTAGAAAAACAATTTTAGTGTT
2721 GTGGGCTCTGTATTCAGACTTCCTTTTTACAAGACCGATGGGCAGTGATAGATTATTTTATCATATTTAATGCATGGGAA
2801 ATAGTGTGCTGAGGAAGCTATTAAAAGTATAACTCAGTGAATTGGGTCTGAGTTTTAAATGAGATATTTCAAAATTGGCT
2881 TGCCACTGTAAAAGCGACTAAATAATAATATGATACTGTTCTTTATGATCTTGTCATGTTTCACTGATATGTTTGGGGTC
2961 TTCACTATGTAAAAAATGTCAAAATTGTAATGAGCAAGCATGTACAAGTAGTCGTAAATCAAAGGTTTTAAACAGGACTG
3041 CATTTTCAATTAGGAAAAGCTGTTTGGCAGATAGCATCCAATGCAAAAACAGAAATATCGTAACGTTCTGCTTAGTGGGC
3121 AAGATAAGATAGGAAAGACATGCTCAAAGAGGCAAAAGAATCATTGCTATCATTCATTCTACACTAGTTTGAAGAAGTTT
3201 TTGTACATCAGAGCACTTCCTTCAGCACACTTTTTTGCCTTCAGATTTCATTTTTTATAAAATGAGAAGACTAATGATAA
3281 ACTGTAGAAATCAAAATTTATTGAGAAATCTGTTTCTCCTAACAGATAGTAACCCTGCCATGATATACTACTTCAACAAT
3361 GTTATAAAATTTATGTGATAATATACATTTTAACCTGGGATTTCTAAATTGCTTTAACAAATGCTAATCCTGAGAGTTGC
3441 CCTGCAGGACTCAAAAGGGAAAGGTTTTGGGACGTGGCAGAACCCTGCAGGGACATGGAATTAAGGCCATTGCAATGTAT
3521 CATCTTTGTAGCATTGTCATCACTCCTAAGCTGCCTTCACAGTTTTAGTACACTAAGATGAGGAAATCGAAAATGGGCAG
3601 AGAAAGCTCATACTGTATAATTGAAGACAGTGACAGAGAACGTGTCAGTTATGCCAAAACTCTTTTGATTTCTGTTCCAG
3681 GATTTCCAACAAGAGGGGAAAGGAATGACTTGGGAGGGTGGGAAAGACATTAGGAGTTGTTTTTATTTTTTACCTTGGAA
3761 GCTTTAGCTACCAATCCAGTACCCTCCTAACTAGAATGTATACACATCAGCAGGACTGACTGACTACTTCATTAGAGATA
3841 TACTGTACTCATTGGGGGCCTTGGGGGTACTGCTGTTCTTATGTGGGATTTTAATGTTGTAATGTATTGCATCTTAATGT
3921 ATTGAATTCATTTTGTTGTACTATATTGGTTGGCATTTTATTAAAATAAATTGTATTGTATCATATTTGTATGTTTTAAG
4001 AGAAAATAATATAAAATACAATATTTGTACTATTATATAGTGCAAAAACTACAAATCTGTGCCTCTGCCTCTTGAATTAA
4081 TTCTTTGGTTGCTTGCATTTGGGAAGGGAATGGAGAAAGGAAAGAACCAATAAAGCTTTCAAAGTTCAAG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cgUGAGU-----UUGACACCCCCGUGAa 5'
            |||||     ::|  ||||||:||| 
Target 5' gtACTCATTGGGGGCCTTGGGGGTACTg 3'
 3845 - 3872 149.00 -23.30
2 
miRNA  3' cguGAGUUUGACACCCCCGUGAa 5'
             |||||:|| |  ||| ||| 
Target 5' cttCTCAAGCT-T--GGGAACTc 3'
 1321 - 1340 131.00 -16.10
3 
miRNA  3' cgUGAGUUUGACACCCCCG-UGAa 5'
            |:|||::| | |||||| :|| 
Target 5' ccATTCAGGCCGAGGGGGCTGCTc 3'
 152 - 175 129.00 -24.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN1157257 127 COSMIC
COSN6621615 162 COSMIC
COSN17183185 339 COSMIC
COSN32055894 390 COSMIC
COSN20110489 542 COSMIC
COSN21558124 741 COSMIC
COSN21911697 860 COSMIC
COSN6621614 1152 COSMIC
COSN30223203 1180 COSMIC
COSN27305989 1235 COSMIC
COSN20110486 1236 COSMIC
COSN8127910 1365 COSMIC
COSN5336434 1551 COSMIC
COSN29466146 1737 COSMIC
COSN20110482 1877 COSMIC
COSN27880345 1999 COSMIC
COSN17759302 2287 COSMIC
COSN5336433 2417 COSMIC
COSN22356651 2724 COSMIC
COSN24294699 2726 COSMIC
COSN25218972 2915 COSMIC
COSN26351228 3104 COSMIC
COSN8127909 3477 COSMIC
COSN15995221 3642 COSMIC
COSN17586474 3897 COSMIC
COSN29232862 4009 COSMIC
rs7337610 1172 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1181926233 2 dbSNP
rs751951309 5 dbSNP
rs1427825305 7 dbSNP
rs869078935 11 dbSNP
rs778347714 16 dbSNP
rs758930917 20 dbSNP
rs1436568888 21 dbSNP
rs1369937821 30 dbSNP
rs532884472 33 dbSNP
rs753086125 38 dbSNP
rs1163681281 52 dbSNP
rs1388916846 54 dbSNP
rs946760717 54 dbSNP
rs561495464 65 dbSNP
rs1039270587 67 dbSNP
rs1424282333 72 dbSNP
rs190995506 73 dbSNP
rs1314093886 81 dbSNP
rs1342575891 92 dbSNP
rs1426567799 94 dbSNP
rs1260759247 101 dbSNP
rs118138065 102 dbSNP
rs1489260764 105 dbSNP
rs1273022765 117 dbSNP
rs1330066067 128 dbSNP
rs992302128 131 dbSNP
rs528505065 132 dbSNP
rs1212548783 135 dbSNP
rs2296283 136 dbSNP
rs1200909102 151 dbSNP
rs1258190806 154 dbSNP
rs1474225794 158 dbSNP
rs1186947049 159 dbSNP
rs2296284 162 dbSNP
rs1473351137 163 dbSNP
rs973561468 164 dbSNP
rs887856272 167 dbSNP
rs369414598 169 dbSNP
rs755207196 173 dbSNP
rs1302412919 176 dbSNP
rs1303869033 177 dbSNP
rs1377793652 178 dbSNP
rs969744212 182 dbSNP
rs1351526175 183 dbSNP
rs1388869880 183 dbSNP
rs1230417520 187 dbSNP
rs1305157990 196 dbSNP
rs1316348657 197 dbSNP
rs1234054047 203 dbSNP
rs1257897453 216 dbSNP
rs1325422928 226 dbSNP
rs1466242467 228 dbSNP
rs561013768 238 dbSNP
rs975822984 242 dbSNP
rs1252225284 244 dbSNP
rs900443728 257 dbSNP
rs148892965 263 dbSNP
rs1175057624 266 dbSNP
rs1406795370 267 dbSNP
rs145629945 269 dbSNP
rs186273156 270 dbSNP
rs1008743789 273 dbSNP
rs1392771720 277 dbSNP
rs1433363457 289 dbSNP
rs1371503352 298 dbSNP
rs74484835 301 dbSNP
rs750040667 310 dbSNP
rs150133515 314 dbSNP
rs1444823527 317 dbSNP
rs1296881511 327 dbSNP
rs1031934476 330 dbSNP
rs998726284 338 dbSNP
rs1460399977 346 dbSNP
rs1387616432 351 dbSNP
rs1305682334 365 dbSNP
rs1345858916 369 dbSNP
rs891588331 370 dbSNP
rs751788051 377 dbSNP
rs1053361147 378 dbSNP
rs1372365817 379 dbSNP
rs1239374107 388 dbSNP
rs868332524 389 dbSNP
rs555648791 390 dbSNP
rs541717762 394 dbSNP
rs1189099102 410 dbSNP
rs1010911619 411 dbSNP
rs900513405 412 dbSNP
rs1488590584 417 dbSNP
rs1038988472 422 dbSNP
rs764954141 431 dbSNP
rs944973372 440 dbSNP
rs1250550627 441 dbSNP
rs878874303 443 dbSNP
rs572879161 447 dbSNP
rs1048430127 450 dbSNP
rs142186292 457 dbSNP
rs1044066388 464 dbSNP
rs948369060 467 dbSNP
rs929532684 469 dbSNP
rs1354364478 471 dbSNP
rs539432822 472 dbSNP
rs916841577 477 dbSNP
rs973182739 478 dbSNP
rs1368805866 483 dbSNP
rs1440266332 487 dbSNP
rs570597238 495 dbSNP
rs1298506042 506 dbSNP
rs541138768 514 dbSNP
rs1197380256 524 dbSNP
rs1215119776 555 dbSNP
rs1270896139 555 dbSNP
rs398077144 555 dbSNP
rs5802479 555 dbSNP
rs60862114 555 dbSNP
rs796181383 555 dbSNP
rs796294388 555 dbSNP
rs1339316343 556 dbSNP
rs1257046485 557 dbSNP
rs969754095 562 dbSNP
rs1476659178 563 dbSNP
rs992334531 566 dbSNP
rs915596574 570 dbSNP
rs1406333709 573 dbSNP
rs1167284800 578 dbSNP
rs992462866 581 dbSNP
rs1392546819 586 dbSNP
rs1461173936 592 dbSNP
rs908074363 594 dbSNP
rs959680810 595 dbSNP
rs1303009715 597 dbSNP
rs1447775367 598 dbSNP
rs1269539579 599 dbSNP
rs1379548753 600 dbSNP
rs376157528 602 dbSNP
rs1291273441 606 dbSNP
rs977739142 607 dbSNP
rs1329401440 612 dbSNP
rs1209010015 614 dbSNP
rs17086618 615 dbSNP
rs1028135904 618 dbSNP
rs996193451 621 dbSNP
rs1242052993 622 dbSNP
rs964672946 630 dbSNP
rs1173049700 640 dbSNP
rs1021837974 644 dbSNP
rs1474983314 646 dbSNP
rs540472659 647 dbSNP
rs1387167992 656 dbSNP
rs147624333 659 dbSNP
rs1317469120 663 dbSNP
rs1439920043 667 dbSNP
rs1416597852 670 dbSNP
rs145109219 679 dbSNP
rs1354616343 680 dbSNP
rs1008878638 681 dbSNP
rs890450786 692 dbSNP
rs1437805283 701 dbSNP
rs1048012107 702 dbSNP
rs1486270518 708 dbSNP
rs1213686239 709 dbSNP
rs371816656 718 dbSNP
rs77847362 726 dbSNP
rs1182726652 756 dbSNP
rs948395578 757 dbSNP
rs761602038 766 dbSNP
rs373762967 768 dbSNP
rs1037848877 782 dbSNP
rs183577527 783 dbSNP
rs540034442 785 dbSNP
rs200247014 788 dbSNP
rs1171710137 789 dbSNP
rs1374567784 799 dbSNP
rs1410217964 802 dbSNP
rs1330727482 810 dbSNP
rs948462593 814 dbSNP
rs151132217 815 dbSNP
rs575951184 818 dbSNP
rs939651938 820 dbSNP
rs1349456050 836 dbSNP
rs1355567494 843 dbSNP
rs992559000 848 dbSNP
rs1278829107 851 dbSNP
rs1347525646 854 dbSNP
rs938367461 855 dbSNP
rs1441354137 858 dbSNP
rs1341024484 861 dbSNP
rs983661086 862 dbSNP
rs924263921 865 dbSNP
rs558959842 869 dbSNP
rs952287580 870 dbSNP
rs1171612617 871 dbSNP
rs1394402206 875 dbSNP
rs1397870252 887 dbSNP
rs4771246 896 dbSNP
rs561684739 898 dbSNP
rs1169405239 907 dbSNP
rs969017106 920 dbSNP
rs1408967476 923 dbSNP
rs1323830039 943 dbSNP
rs1021473672 946 dbSNP
rs1438082118 947 dbSNP
rs1312490408 954 dbSNP
rs1370887906 955 dbSNP
rs975246946 959 dbSNP
rs1228847718 961 dbSNP
rs1226057962 965 dbSNP
rs1253406953 966 dbSNP
rs1420600418 978 dbSNP
rs964787832 982 dbSNP
rs1018990993 984 dbSNP
rs1009301285 993 dbSNP
rs764420705 1005 dbSNP
rs1191817057 1007 dbSNP
rs1252505311 1008 dbSNP
rs1429016338 1025 dbSNP
rs1031984922 1032 dbSNP
rs371272803 1040 dbSNP
rs1195274816 1041 dbSNP
rs142062307 1046 dbSNP
rs573216329 1047 dbSNP
rs559672081 1048 dbSNP
rs114064157 1058 dbSNP
rs577103402 1068 dbSNP
rs761241715 1070 dbSNP
rs1026692609 1071 dbSNP
rs1216857915 1075 dbSNP
rs895559958 1079 dbSNP
rs9551465 1081 dbSNP
rs1227151356 1083 dbSNP
rs899382953 1084 dbSNP
rs1223021551 1085 dbSNP
rs1212098394 1088 dbSNP
rs1272580347 1099 dbSNP
rs1486245774 1111 dbSNP
rs1356888932 1115 dbSNP
rs1285884601 1120 dbSNP
rs1259579243 1127 dbSNP
rs1037942844 1139 dbSNP
rs112110458 1140 dbSNP
rs1353624960 1148 dbSNP
rs1048411514 1150 dbSNP
rs17086617 1152 dbSNP
rs1400798878 1153 dbSNP
rs1362718096 1156 dbSNP
rs1056935810 1161 dbSNP
rs1454899535 1162 dbSNP
rs568275934 1167 dbSNP
rs1400496929 1170 dbSNP
rs7337610 1172 dbSNP
rs977462804 1173 dbSNP
rs1165495074 1174 dbSNP
rs1313839299 1177 dbSNP
rs943463731 1179 dbSNP
rs1474540946 1181 dbSNP
rs947061513 1186 dbSNP
rs1193792179 1210 dbSNP
rs914514013 1213 dbSNP
rs1241268648 1224 dbSNP
rs1478569188 1227 dbSNP
rs1240015241 1229 dbSNP
rs1214724805 1230 dbSNP
rs1451959824 1231 dbSNP
rs975301270 1232 dbSNP
rs1291828664 1233 dbSNP
rs1211715016 1234 dbSNP
rs1334112348 1235 dbSNP
rs963882419 1236 dbSNP
rs987510153 1240 dbSNP
rs1364270748 1246 dbSNP
rs1186698090 1247 dbSNP
rs1259298418 1247 dbSNP
rs61707719 1247 dbSNP
rs796917367 1247 dbSNP
rs912364353 1247 dbSNP
rs1250795578 1248 dbSNP
rs1268634209 1249 dbSNP
rs1156290270 1250 dbSNP
rs1362754922 1252 dbSNP
rs534871675 1263 dbSNP
rs1031593016 1267 dbSNP
rs774379920 1269 dbSNP
rs954932047 1270 dbSNP
rs1413323086 1278 dbSNP
rs376657369 1280 dbSNP
rs993932992 1281 dbSNP
rs1460300431 1289 dbSNP
rs1311973968 1292 dbSNP
rs1394423163 1293 dbSNP
rs1170700629 1299 dbSNP
rs1466734175 1301 dbSNP
rs963392450 1302 dbSNP
rs995883528 1307 dbSNP
rs148789394 1309 dbSNP
rs1478177448 1310 dbSNP
rs968602644 1311 dbSNP
rs1022786257 1318 dbSNP
rs1345724797 1319 dbSNP
rs1209877754 1320 dbSNP
rs1016563918 1334 dbSNP
rs1233296425 1349 dbSNP
rs1481394477 1351 dbSNP
rs1191543122 1353 dbSNP
rs1467934442 1355 dbSNP
rs771190489 1356 dbSNP
rs895592549 1358 dbSNP
rs749541247 1364 dbSNP
rs1194732271 1367 dbSNP
rs1397422463 1373 dbSNP
rs375138914 1381 dbSNP
rs534710737 1382 dbSNP
rs1463678235 1385 dbSNP
rs1296684299 1386 dbSNP
rs1376166840 1389 dbSNP
rs191321660 1393 dbSNP
rs1305798791 1394 dbSNP
rs1002640066 1400 dbSNP
rs768492542 1401 dbSNP
rs1201931112 1406 dbSNP
rs1250414954 1416 dbSNP
rs565536476 1422 dbSNP
rs1215002784 1423 dbSNP
rs899403317 1424 dbSNP
rs1453082050 1425 dbSNP
rs1041449802 1442 dbSNP
rs947081868 1475 dbSNP
rs1039244040 1483 dbSNP
rs1346015594 1495 dbSNP
rs1420597924 1499 dbSNP
rs943494939 1510 dbSNP
rs1168861190 1511 dbSNP
rs1399821154 1523 dbSNP
rs1462212313 1530 dbSNP
rs911995205 1535 dbSNP
rs1392418509 1537 dbSNP
rs914232757 1545 dbSNP
rs1306020143 1553 dbSNP
rs1039607585 1554 dbSNP
rs1439174268 1555 dbSNP
rs1370821313 1559 dbSNP
rs942584267 1562 dbSNP
rs746921639 1571 dbSNP
rs552188557 1572 dbSNP
rs987928667 1580 dbSNP
rs569910420 1584 dbSNP
rs535056090 1612 dbSNP
rs1335050006 1616 dbSNP
rs1234790131 1622 dbSNP
rs1270686238 1626 dbSNP
rs987007740 1628 dbSNP
rs1221393497 1629 dbSNP
rs186621805 1638 dbSNP
rs1487170804 1640 dbSNP
rs1185122429 1646 dbSNP
rs1352233944 1650 dbSNP
rs1475636975 1654 dbSNP
rs181181788 1658 dbSNP
rs1169179105 1675 dbSNP
rs924643277 1685 dbSNP
rs951231443 1687 dbSNP
rs1319136485 1707 dbSNP
rs1346876120 1714 dbSNP
rs561424573 1716 dbSNP
rs972170963 1718 dbSNP
rs1453573983 1723 dbSNP
rs1238626439 1724 dbSNP
rs1234692031 1725 dbSNP
rs1180409392 1726 dbSNP
rs548120354 1730 dbSNP
rs1479640483 1732 dbSNP
rs1016239434 1735 dbSNP
rs1231207385 1741 dbSNP
rs1491352539 1745 dbSNP
rs991299656 1746 dbSNP
rs528274440 1759 dbSNP
rs1190242290 1761 dbSNP
rs1312931667 1764 dbSNP
rs1282742635 1766 dbSNP
rs1004409493 1780 dbSNP
rs370648232 1794 dbSNP
rs757857854 1808 dbSNP
rs1232448659 1819 dbSNP
rs958915814 1821 dbSNP
rs559707097 1833 dbSNP
rs1410307416 1834 dbSNP
rs1398836112 1836 dbSNP
rs1157995432 1840 dbSNP
rs1375764765 1843 dbSNP
rs951156420 1844 dbSNP
rs1027095748 1854 dbSNP
rs1339488766 1855 dbSNP
rs995154295 1857 dbSNP
rs1280749098 1864 dbSNP
rs1003477863 1865 dbSNP
rs532677088 1869 dbSNP
rs188173472 1870 dbSNP
rs1225940081 1874 dbSNP
rs1371844294 1875 dbSNP
rs199630957 1877 dbSNP
rs1349314306 1881 dbSNP
rs1039276786 1886 dbSNP
rs1448131018 1888 dbSNP
rs1376819957 1892 dbSNP
rs11400597 1893 dbSNP
rs1277006266 1893 dbSNP
rs1442026519 1893 dbSNP
rs368758193 1893 dbSNP
rs56065910 1893 dbSNP
rs58793540 1893 dbSNP
rs1310686123 1894 dbSNP
rs1433770448 1896 dbSNP
rs576926482 1898 dbSNP
rs1160269794 1900 dbSNP
rs1417182464 1905 dbSNP
rs1407180480 1907 dbSNP
rs1023684450 1908 dbSNP
rs1013681785 1923 dbSNP
rs1333412881 1925 dbSNP
rs563094230 1939 dbSNP
rs1259765757 1943 dbSNP
rs184926338 1948 dbSNP
rs1208969309 1953 dbSNP
rs1273401673 1954 dbSNP
rs1344775517 1956 dbSNP
rs1485488349 1963 dbSNP
rs749938309 1973 dbSNP
rs574479923 1976 dbSNP
rs1456656100 1977 dbSNP
rs1315586909 1979 dbSNP
rs182017768 1981 dbSNP
rs1376800704 1982 dbSNP
rs1475623460 1983 dbSNP
rs1169495944 1986 dbSNP
rs1393853600 1986 dbSNP
rs1229455906 1987 dbSNP
rs756918069 1989 dbSNP
rs1396070489 1992 dbSNP
rs1443687019 1993 dbSNP
rs1322161716 1994 dbSNP
rs1330816211 1995 dbSNP
rs1272339551 1998 dbSNP
rs1477607173 1998 dbSNP
rs7325639 1999 dbSNP
rs890587163 2000 dbSNP
rs1360791490 2001 dbSNP
rs1207923750 2002 dbSNP
rs1290354923 2004 dbSNP
rs1266588227 2008 dbSNP
rs1041893617 2009 dbSNP
rs116250992 2012 dbSNP
rs764487702 2013 dbSNP
rs189321409 2014 dbSNP
rs60370048 2018 dbSNP
rs892808372 2020 dbSNP
rs772120319 2032 dbSNP
rs570325133 2034 dbSNP
rs1185934345 2035 dbSNP
rs1419313902 2042 dbSNP
rs1474972586 2043 dbSNP
rs1264180967 2047 dbSNP
rs551311721 2048 dbSNP
rs1485091770 2053 dbSNP
rs942631806 2058 dbSNP
rs1399574087 2071 dbSNP
rs536635694 2074 dbSNP
rs567683352 2079 dbSNP
rs373410893 2080 dbSNP
rs561046091 2082 dbSNP
rs1270679038 2084 dbSNP
rs1051003522 2092 dbSNP
rs929837075 2096 dbSNP
rs768153641 2098 dbSNP
rs1206854114 2102 dbSNP
rs918419188 2103 dbSNP
rs1232164158 2104 dbSNP
rs1260704682 2107 dbSNP
rs972566280 2109 dbSNP
rs1340676850 2110 dbSNP
rs1188138735 2113 dbSNP
rs942054533 2114 dbSNP
rs1297267552 2119 dbSNP
rs1380227525 2122 dbSNP
rs947365988 2124 dbSNP
rs1360981734 2128 dbSNP
rs771352311 2132 dbSNP
rs991517364 2134 dbSNP
rs958678052 2135 dbSNP
rs1454718858 2136 dbSNP
rs1392225527 2142 dbSNP
rs1358953697 2153 dbSNP
rs1162802897 2158 dbSNP
rs1460985835 2159 dbSNP
rs547885128 2162 dbSNP
rs1313936581 2164 dbSNP
rs1381583026 2171 dbSNP
rs991332122 2176 dbSNP
rs17626077 2186 dbSNP
rs1336450777 2190 dbSNP
rs1241023899 2193 dbSNP
rs1283801750 2200 dbSNP
rs981710609 2202 dbSNP
rs1211315528 2218 dbSNP
rs928493057 2230 dbSNP
rs1482049217 2231 dbSNP
rs77579229 2235 dbSNP
rs1250547708 2248 dbSNP
rs774486229 2260 dbSNP
rs1261425364 2262 dbSNP
rs1176317972 2273 dbSNP
rs1378993803 2281 dbSNP
rs552506288 2287 dbSNP
rs1020413888 2288 dbSNP
rs1361289755 2294 dbSNP
rs1464687882 2297 dbSNP
rs1026713401 2298 dbSNP
rs368717928 2303 dbSNP
rs185292448 2304 dbSNP
rs892856811 2307 dbSNP
rs1007851941 2315 dbSNP
rs1017963562 2331 dbSNP
rs1006533242 2337 dbSNP
rs890787760 2340 dbSNP
rs1051485586 2341 dbSNP
rs1310234263 2343 dbSNP
rs1208909471 2352 dbSNP
rs1213693031 2359 dbSNP
rs1251528286 2360 dbSNP
rs1196191000 2363 dbSNP
rs929875076 2378 dbSNP
rs1439575582 2379 dbSNP
rs896982416 2382 dbSNP
rs1427627224 2384 dbSNP
rs193167358 2385 dbSNP
rs1175880042 2387 dbSNP
rs1252603570 2387 dbSNP
rs1467425258 2395 dbSNP
rs778388634 2400 dbSNP
rs35630136 2406 dbSNP
rs1399674850 2415 dbSNP
rs1038182427 2419 dbSNP
rs568661261 2422 dbSNP
rs999013928 2423 dbSNP
rs1301653565 2427 dbSNP
rs144398423 2429 dbSNP
rs377727670 2437 dbSNP
rs947398536 2438 dbSNP
rs1296093347 2444 dbSNP
rs937360237 2445 dbSNP
rs928621321 2446 dbSNP
rs982105241 2448 dbSNP
rs572308483 2459 dbSNP
rs558772838 2462 dbSNP
rs1020887666 2468 dbSNP
rs990304708 2470 dbSNP
rs1169757205 2472 dbSNP
rs1460614905 2475 dbSNP
rs957515212 2491 dbSNP
rs1018016896 2492 dbSNP
rs1478897724 2497 dbSNP
rs527821859 2500 dbSNP
rs80274480 2501 dbSNP
rs189867411 2511 dbSNP
rs983040745 2523 dbSNP
rs771990488 2524 dbSNP
rs1348030062 2534 dbSNP
rs1435728004 2536 dbSNP
rs994509768 2543 dbSNP
rs1342165135 2544 dbSNP
rs574172886 2549 dbSNP
rs1193534534 2551 dbSNP
rs77920963 2556 dbSNP
rs1229523536 2562 dbSNP
rs199877183 2572 dbSNP
rs1287189211 2580 dbSNP
rs1320413722 2593 dbSNP
rs755081411 2599 dbSNP
rs1251995636 2603 dbSNP
rs1264277700 2608 dbSNP
rs1489479335 2610 dbSNP
rs778459584 2614 dbSNP
rs184887748 2625 dbSNP
rs751738476 2627 dbSNP
rs554319813 2634 dbSNP
rs534240837 2635 dbSNP
rs539823924 2641 dbSNP
rs963788881 2643 dbSNP
rs191638407 2649 dbSNP
rs1345445629 2650 dbSNP
rs1055897824 2652 dbSNP
rs756757695 2657 dbSNP
rs368823732 2665 dbSNP
rs986453622 2667 dbSNP
rs552432547 2668 dbSNP
rs1045706073 2677 dbSNP
rs532310270 2684 dbSNP
rs946022505 2685 dbSNP
rs1297418144 2687 dbSNP
rs1355673113 2690 dbSNP
rs913506318 2709 dbSNP
rs569872127 2710 dbSNP
rs1315637104 2713 dbSNP
rs990357320 2715 dbSNP
rs1030560824 2718 dbSNP
rs1287361975 2725 dbSNP
rs1337490179 2730 dbSNP
rs1356537009 2732 dbSNP
rs777311847 2737 dbSNP
rs1330911942 2741 dbSNP
rs999443447 2752 dbSNP
rs957567570 2755 dbSNP
rs1389749722 2756 dbSNP
rs911355455 2757 dbSNP
rs985178625 2759 dbSNP
rs370059232 2760 dbSNP
rs74470712 2783 dbSNP
rs1472513784 2793 dbSNP
rs1177925266 2794 dbSNP
rs894550963 2805 dbSNP
rs1437803918 2807 dbSNP
rs529664912 2813 dbSNP
rs993872156 2818 dbSNP
rs961332678 2823 dbSNP
rs753118463 2837 dbSNP
rs1366069540 2842 dbSNP
rs1005439163 2844 dbSNP
rs144541267 2847 dbSNP
rs540620256 2848 dbSNP
rs1379716444 2849 dbSNP
rs1238644192 2855 dbSNP
rs768063529 2857 dbSNP
rs1346171900 2877 dbSNP
rs1202330307 2882 dbSNP
rs1276768622 2884 dbSNP
rs1442120387 2886 dbSNP
rs929799350 2894 dbSNP
rs78901714 2895 dbSNP
rs1046211653 2896 dbSNP
rs569246424 2906 dbSNP
rs752056080 2906 dbSNP
rs942458135 2907 dbSNP
rs946106129 2918 dbSNP
rs1170652883 2937 dbSNP
rs913214894 2939 dbSNP
rs910958198 2943 dbSNP
rs1366824816 2957 dbSNP
rs986484693 2962 dbSNP
rs1332739970 2967 dbSNP
rs1397525443 2978 dbSNP
rs1445143671 2978 dbSNP
rs1279280471 2982 dbSNP
rs1054641751 2986 dbSNP
rs1205519155 2997 dbSNP
rs1332249373 2999 dbSNP
rs766455226 3001 dbSNP
rs762979008 3013 dbSNP
rs1031008263 3014 dbSNP
rs1277697439 3025 dbSNP
rs1316149694 3031 dbSNP
rs911408313 3032 dbSNP
rs985564704 3067 dbSNP
rs1198163139 3075 dbSNP
rs753663914 3076 dbSNP
rs564622784 3092 dbSNP
rs1453302987 3093 dbSNP
rs1416808526 3096 dbSNP
rs1373888992 3098 dbSNP
rs114504890 3099 dbSNP
rs139666876 3100 dbSNP
rs186944349 3101 dbSNP
rs543748849 3104 dbSNP
rs1005492868 3105 dbSNP
rs560431245 3107 dbSNP
rs959250578 3108 dbSNP
rs1392057645 3116 dbSNP
rs1034366794 3123 dbSNP
rs1033585302 3128 dbSNP
rs762087195 3143 dbSNP
rs1330907627 3145 dbSNP
rs1003291771 3149 dbSNP
rs907159781 3158 dbSNP
rs1047500943 3162 dbSNP
rs1189473990 3168 dbSNP
rs3088111 3170 dbSNP
rs898404933 3179 dbSNP
rs375687350 3180 dbSNP
rs1358327584 3181 dbSNP
rs771900651 3184 dbSNP
rs1208009174 3185 dbSNP
rs573956765 3188 dbSNP
rs1488499338 3197 dbSNP
rs1448503417 3198 dbSNP
rs146379229 3204 dbSNP
rs1195665961 3208 dbSNP
rs1260576002 3210 dbSNP
rs1045847022 3216 dbSNP
rs1281947627 3219 dbSNP
rs1204449133 3223 dbSNP
rs942489324 3230 dbSNP
rs1273833277 3231 dbSNP
rs1235228135 3237 dbSNP
rs910989365 3238 dbSNP
rs1292894439 3240 dbSNP
rs1161992439 3244 dbSNP
rs3751397 3245 dbSNP
rs1328537684 3246 dbSNP
rs1420677734 3248 dbSNP
rs891798931 3248 dbSNP
rs774187304 3253 dbSNP
rs1313466088 3257 dbSNP
rs1399659399 3257 dbSNP
rs1400586374 3265 dbSNP
rs1342353660 3271 dbSNP
rs3751396 3272 dbSNP
rs1283526846 3275 dbSNP
rs890065021 3284 dbSNP
rs1218495411 3286 dbSNP
rs1283672295 3298 dbSNP
rs1487736059 3301 dbSNP
rs1200698259 3305 dbSNP
rs558253922 3321 dbSNP
rs182282584 3328 dbSNP
rs1421536811 3329 dbSNP
rs983676861 3332 dbSNP
rs542426981 3333 dbSNP
rs922728655 3337 dbSNP
rs777502474 3339 dbSNP
rs138874366 3340 dbSNP
rs1359049564 3344 dbSNP
rs11618105 3346 dbSNP
rs983815143 3347 dbSNP
rs959006026 3357 dbSNP
rs1033637560 3359 dbSNP
rs958829006 3365 dbSNP
rs7319123 3370 dbSNP
rs373336887 3374 dbSNP
rs567220280 3375 dbSNP
rs1352732612 3386 dbSNP
rs1254816599 3390 dbSNP
rs1257381750 3394 dbSNP
rs1482099268 3396 dbSNP
rs971878365 3404 dbSNP
rs547017277 3415 dbSNP
rs1332744407 3423 dbSNP
rs1289297871 3428 dbSNP
rs781673259 3429 dbSNP
rs1341766600 3432 dbSNP
rs1268728504 3434 dbSNP
rs1434833990 3436 dbSNP
rs1372269126 3437 dbSNP
rs1401156052 3440 dbSNP
rs994558956 3441 dbSNP
rs970596660 3442 dbSNP
rs370476825 3444 dbSNP
rs1329234128 3445 dbSNP
rs1372594449 3447 dbSNP
rs527276893 3449 dbSNP
rs755342782 3470 dbSNP
rs1310033254 3471 dbSNP
rs770743233 3473 dbSNP
rs1006736941 3474 dbSNP
rs891852514 3476 dbSNP
rs1328982707 3491 dbSNP
rs1033044165 3495 dbSNP
rs933790055 3496 dbSNP
rs1192110531 3506 dbSNP
rs1431608437 3509 dbSNP
rs1175997323 3514 dbSNP
rs1424341295 3519 dbSNP
rs1467244837 3523 dbSNP
rs114735744 3528 dbSNP
rs1353825714 3531 dbSNP
rs1416960738 3533 dbSNP
rs1437142546 3543 dbSNP
rs1295019155 3549 dbSNP
rs889775914 3554 dbSNP
rs1050017216 3555 dbSNP
rs551427549 3561 dbSNP
rs946355599 3573 dbSNP
rs1342047684 3576 dbSNP
rs1216235281 3577 dbSNP
rs914832680 3583 dbSNP
rs148264181 3585 dbSNP
rs762737671 3586 dbSNP
rs934196589 3588 dbSNP
rs958942447 3589 dbSNP
rs1396714704 3593 dbSNP
rs927497617 3594 dbSNP
rs1199231420 3595 dbSNP
rs982006920 3598 dbSNP
rs534696982 3602 dbSNP
rs73453252 3605 dbSNP
rs1191545292 3607 dbSNP
rs1246155771 3623 dbSNP
rs1205327468 3626 dbSNP
rs1418920333 3629 dbSNP
rs1439708290 3641 dbSNP
rs780451242 3642 dbSNP
rs1348117595 3647 dbSNP
rs1423747299 3652 dbSNP
rs1228020406 3653 dbSNP
rs1349018510 3667 dbSNP
rs940156696 3668 dbSNP
rs1298635923 3672 dbSNP
rs994195217 3683 dbSNP
rs563056035 3684 dbSNP
rs909654341 3688 dbSNP
rs1269033530 3693 dbSNP
rs192604640 3695 dbSNP
rs962669973 3703 dbSNP
rs1229328219 3704 dbSNP
rs758448734 3706 dbSNP
rs1357999669 3708 dbSNP
rs1298189986 3726 dbSNP
rs1287228438 3731 dbSNP
rs188992197 3738 dbSNP
rs1214739503 3750 dbSNP
rs889699441 3751 dbSNP
rs1183726501 3752 dbSNP
rs1411500953 3753 dbSNP
rs1307009562 3754 dbSNP
rs1158988233 3756 dbSNP
rs1381969090 3757 dbSNP
rs1417419630 3758 dbSNP
rs1050968006 3762 dbSNP
rs1434995592 3773 dbSNP
rs1359452248 3776 dbSNP
rs926244901 3782 dbSNP
rs1449568057 3783 dbSNP
rs998403121 3791 dbSNP
rs1171554956 3803 dbSNP
rs1453667253 3804 dbSNP
rs1408636069 3824 dbSNP
rs902272812 3836 dbSNP
rs982055648 3841 dbSNP
rs3794404 3849 dbSNP
rs142303063 3852 dbSNP
rs1212301065 3853 dbSNP
rs893511154 3856 dbSNP
rs1179198354 3858 dbSNP
rs1054709642 3859 dbSNP
rs1231303219 3863 dbSNP
rs1437584649 3868 dbSNP
rs937621391 3871 dbSNP
rs1415849967 3872 dbSNP
rs927520513 3872 dbSNP
rs1173278695 3875 dbSNP
rs981654698 3876 dbSNP
rs879792431 3880 dbSNP
rs1204661635 3899 dbSNP
rs950236016 3904 dbSNP
rs988409706 3906 dbSNP
rs1282853210 3907 dbSNP
rs1379831093 3911 dbSNP
rs1440438795 3912 dbSNP
rs1279375278 3919 dbSNP
rs1345932263 3926 dbSNP
rs1479271349 3929 dbSNP
rs918689514 3930 dbSNP
rs1221179823 3931 dbSNP
rs1209189134 3933 dbSNP
rs770116870 3938 dbSNP
rs972774815 3949 dbSNP
rs1199423504 3954 dbSNP
rs957847913 3962 dbSNP
rs1239923546 3969 dbSNP
rs1436061021 3972 dbSNP
rs1180772250 3973 dbSNP
rs1033091356 3980 dbSNP
rs1478773260 3982 dbSNP
rs540649203 3982 dbSNP
rs1428244065 3989 dbSNP
rs889785733 3992 dbSNP
rs1465674578 4011 dbSNP
rs1308330082 4013 dbSNP
rs1028717002 4019 dbSNP
rs750463593 4030 dbSNP
rs1164772179 4036 dbSNP
rs1408749169 4037 dbSNP
rs1328546873 4041 dbSNP
rs998459466 4044 dbSNP
rs1332058812 4059 dbSNP
rs1438798571 4082 dbSNP
rs1370501623 4083 dbSNP
rs578052474 4092 dbSNP
rs985445857 4095 dbSNP
rs1219305682 4103 dbSNP
rs1287198523 4117 dbSNP
rs1414970872 4120 dbSNP
rs1260123018 4128 dbSNP
rs1337310165 4131 dbSNP
rs1253115177 4145 dbSNP
rs953961633 4149 dbSNP
rs570470089 4153 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cgugaguuugacacccCCGUGAa 5'
                          |||||| 
Target 5' --------------uuGGCACUa 3'
 		1 - 9
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000282397.4 | 3UTR | UUGGCACUAACAAAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
42 hsa-miR-371b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055410 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 6
MIRT065883 GDF11 growth differentiation factor 11 2 2
MIRT183507 BTG2 BTG anti-proliferation factor 2 2 2
MIRT277106 CDCA8 cell division cycle associated 8 2 2
MIRT300592 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT441361 ZNF75A zinc finger protein 75a 2 2
MIRT442692 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT443388 CHML CHM like, Rab escort protein 2 2 2
MIRT443571 EVX2 even-skipped homeobox 2 2 2
MIRT443671 FLT1 fms related tyrosine kinase 1 2 2
MIRT465524 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT492169 STAT3 signal transducer and activator of transcription 3 2 2
MIRT496992 TMEM231 transmembrane protein 231 2 2
MIRT509012 FBXO6 F-box protein 6 2 2
MIRT509766 NCAPD2 non-SMC condensin I complex subunit D2 2 2
MIRT514033 BNIP2 BCL2 interacting protein 2 2 2
MIRT524995 AFF1 AF4/FMR2 family member 1 2 10
MIRT529899 C1orf64 steroid receptor associated and regulated protein 2 2
MIRT530045 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT534479 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT535065 PPP2R5D protein phosphatase 2 regulatory subunit B'delta 2 4
MIRT539151 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT540937 OIP5 Opa interacting protein 5 2 2
MIRT546360 SYNM synemin 2 2
MIRT553436 TPM3 tropomyosin 3 2 2
MIRT556278 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT564092 NSA2 NSA2, ribosome biogenesis homolog 2 2
MIRT568376 ATXN1 ataxin 1 2 2
MIRT572255 ANKRD52 ankyrin repeat domain 52 2 2
MIRT572453 TRIM10 tripartite motif containing 10 2 2
MIRT610741 NUDT16 nudix hydrolase 16 2 4
MIRT622754 PHACTR2 phosphatase and actin regulator 2 2 2
MIRT627220 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT629555 SPN sialophorin 2 2
MIRT640288 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT651922 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT684290 CDK9 cyclin dependent kinase 9 2 2
MIRT700230 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT702748 IGFBP3 insulin like growth factor binding protein 3 2 2
MIRT711110 TBC1D21 TBC1 domain family member 21 2 2
MIRT716402 SEPT5 septin 5 2 2
MIRT723677 CTC1 CST telomere replication complex component 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-371b Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (SW1990)
hsa-miR-371b-3p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (SW1990)
hsa-miR-371b-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-371b-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)

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