miRTarBase - #MIRT444114


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pre-miRNA Information
pre-miRNA hsa-mir-3133   
Genomic Coordinates chr2: 241477905 - 241477982
Description Homo sapiens miR-3133 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3133
Sequence 10| UAAAGAACUCUUAAAACCCAAU |31
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1030052469 1 dbSNP
rs955010137 12 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CEPT1   
Synonyms -
Description choline/ethanolamine phosphotransferase 1
Transcript NM_001007794   
Other Transcripts NM_006090   
Expression
Putative miRNA Targets on CEPT1
3'UTR of CEPT1
(miRNA target sites are highlighted)		 
>CEPT1|NM_001007794|3'UTR
   1 TGATGTAATTGGTATATAGGAACATCATGTTTTCTGCAGGAAAGAAAGTAACATATTAAGGAGAATGGGGGTGGATAAGA
  81 ACAAATATAATTTATAATAATCAATGTTGTATAACTTTTATTCTTTATTATTGGTAACACGCCCTAACTATCCTGTGTGA
 161 GAATGGGAATTTCAAGTCCCATCTTGTAAATTGTATATGTTGTCATGCAGGGTTTGGGCCAAGAAAGCATGCAGAAAAAA
 241 ATGCCATGTGATTGTAATTATCCTGGATTCAGAATAATACTGTGATGGGGAGCCAGATCCGCAGTGGTGGAGAGTTCTAA
 321 TGTTGACTGTTTGCAGGCCAAAAGATGATTGCTTTATAATTTTAACAAATCATTGTCTTTTAGTAACATCCTTGTTTAGT
 401 GTCTTCTCAAGCTTTCTTTACTGAGGAATTCAGCTTGTGACACAGATACATCCCACTAGCTTGTGAGGTGGAACTAGTAA
 481 TAAAGACCTTGAATTTGGATTGAAAAGTTTCCTATCTTTACATTGTTGAGGAAGTCCTTTTTTTTTTTTTTTTTTTTTTA
 561 ATTGCTCAAGAAATGATTCTCTCACAGGCTTGGGAAATCCTGTTAGCATGCAGAATAATGTGGTAACTTTGTCAATTTCC
 641 CATTTTATTTTTTTAAATAAATATATGATCTAAAAGCCAACTTTTTCTCAGTTTTACTCAGTGGAAAGATAAACTAAGTT
 721 TTAATGTTATTTTTTTAAATTTAAGCAAAATTTATTTCTGTTCTTTAATAAATAAGAAAATGTGGTCCACTGCAAAAAAA
 801 AAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uaacccaAAAU--UCUCAAGAAAu 5'
                 ||||     ||||||| 
Target 5' agcaaaaTTTATTTCTGTTCTTTa 3'
 744 - 767 141.00 -6.00
2 
miRNA  3' uaACCCAAAAUUCUCAAGAaau 5'
            |||   | :||||||||   
Target 5' agTGG---TGGAGAGTTCTaat 3'
 303 - 321 121.00 -13.12
3 
miRNA  3' uaACCCAAAAUUCU-------CAAGAAAu 5'
            |||  | ||:||       |||:| | 
Target 5' atTGGTATATAGGAACATCATGTTTTCTg 3'
 8 - 36 104.00 -6.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31479664 27 COSMIC
COSN31605705 27 COSMIC
COSN30520377 44 COSMIC
COSN30484141 60 COSMIC
COSN28869688 69 COSMIC
COSN13455299 96 COSMIC
COSN8317912 105 COSMIC
COSN31599187 117 COSMIC
COSN1086964 327 COSMIC
COSN16127719 427 COSMIC
COSN31547588 575 COSMIC
COSN26569470 648 COSMIC
COSN26572566 720 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs150966457 1 dbSNP
rs764018238 10 dbSNP
rs1271785897 16 dbSNP
rs370300114 17 dbSNP
rs764621736 23 dbSNP
rs373652470 25 dbSNP
rs1037239882 27 dbSNP
rs1336806115 28 dbSNP
rs538758628 42 dbSNP
rs1288457439 43 dbSNP
rs151257025 46 dbSNP
rs755761590 52 dbSNP
rs1422856038 53 dbSNP
rs754159284 53 dbSNP
rs969960511 54 dbSNP
rs547602849 58 dbSNP
rs772504965 62 dbSNP
rs1259638571 67 dbSNP
rs575818581 69 dbSNP
rs1303195141 74 dbSNP
rs1384056253 75 dbSNP
rs544543757 76 dbSNP
rs925780164 80 dbSNP
rs1288691176 83 dbSNP
rs1232510762 86 dbSNP
rs1340068559 92 dbSNP
rs1310935427 95 dbSNP
rs1012558587 98 dbSNP
rs1379914861 101 dbSNP
rs935859506 105 dbSNP
rs1053850959 110 dbSNP
rs1391531176 119 dbSNP
rs1457775162 123 dbSNP
rs971319703 131 dbSNP
rs80205725 132 dbSNP
rs1365226565 134 dbSNP
rs767129718 135 dbSNP
rs530830313 141 dbSNP
rs914025661 142 dbSNP
rs1268741992 144 dbSNP
rs945349677 145 dbSNP
rs867188212 153 dbSNP
rs956084225 164 dbSNP
rs540224097 187 dbSNP
rs1247180041 191 dbSNP
rs1341330122 193 dbSNP
rs560199304 194 dbSNP
rs12404986 196 dbSNP
rs1433039579 198 dbSNP
rs1367970090 199 dbSNP
rs890457535 205 dbSNP
rs545934058 206 dbSNP
rs1007788785 212 dbSNP
rs914671728 225 dbSNP
rs1260504226 229 dbSNP
rs1388939138 234 dbSNP
rs747080761 234 dbSNP
rs1165392254 235 dbSNP
rs899318645 245 dbSNP
rs562508587 248 dbSNP
rs189516109 252 dbSNP
rs950506457 254 dbSNP
rs1450870414 255 dbSNP
rs76943617 256 dbSNP
rs1198015568 263 dbSNP
rs879038340 275 dbSNP
rs150021706 283 dbSNP
rs761903403 290 dbSNP
rs1360411685 293 dbSNP
rs1274273380 299 dbSNP
rs868707314 301 dbSNP
rs1204892007 302 dbSNP
rs1226255157 310 dbSNP
rs980030247 315 dbSNP
rs918742022 320 dbSNP
rs1189556088 328 dbSNP
rs1329875590 328 dbSNP
rs925883230 330 dbSNP
rs957223538 337 dbSNP
rs766220049 338 dbSNP
rs1427422460 342 dbSNP
rs1433975383 343 dbSNP
rs988675514 356 dbSNP
rs1305861353 357 dbSNP
rs1431271752 367 dbSNP
rs1390187406 369 dbSNP
rs1048785075 372 dbSNP
rs913080084 373 dbSNP
rs1476972658 377 dbSNP
rs1379350297 378 dbSNP
rs945405381 384 dbSNP
rs1482639681 386 dbSNP
rs1276048952 405 dbSNP
rs1203202424 406 dbSNP
rs1484175581 408 dbSNP
rs774230164 410 dbSNP
rs887560512 412 dbSNP
rs546551835 427 dbSNP
rs1343448912 436 dbSNP
rs987574610 450 dbSNP
rs911870869 455 dbSNP
rs948380506 456 dbSNP
rs943393101 457 dbSNP
rs1039269523 458 dbSNP
rs1350195197 463 dbSNP
rs899453065 466 dbSNP
rs1286856270 468 dbSNP
rs1044004261 482 dbSNP
rs565821458 487 dbSNP
rs1455463680 490 dbSNP
rs930806611 500 dbSNP
rs1370809972 503 dbSNP
rs1322415455 515 dbSNP
rs906880666 517 dbSNP
rs934908093 518 dbSNP
rs1389294667 520 dbSNP
rs1439446534 524 dbSNP
rs1047845688 526 dbSNP
rs1332906495 530 dbSNP
rs1412300171 533 dbSNP
rs886626825 537 dbSNP
rs1013929579 538 dbSNP
rs1204798013 538 dbSNP
rs1209505562 538 dbSNP
rs1280848856 538 dbSNP
rs1440829240 538 dbSNP
rs34173256 538 dbSNP
rs755388668 538 dbSNP
rs759715895 538 dbSNP
rs1024503081 539 dbSNP
rs1266572453 541 dbSNP
rs1032019107 548 dbSNP
rs181828103 550 dbSNP
rs1219418638 553 dbSNP
rs397965546 560 dbSNP
rs1341669210 561 dbSNP
rs1305917259 564 dbSNP
rs1327468380 565 dbSNP
rs1021709807 567 dbSNP
rs1230662787 568 dbSNP
rs1001644893 571 dbSNP
rs34078281 571 dbSNP
rs1161064205 576 dbSNP
rs954144312 577 dbSNP
rs1032919946 582 dbSNP
rs1181443915 589 dbSNP
rs1471938042 620 dbSNP
rs957238881 624 dbSNP
rs1468415232 628 dbSNP
rs1184314300 634 dbSNP
rs757600503 636 dbSNP
rs1266827795 647 dbSNP
rs201508417 654 dbSNP
rs1317835610 655 dbSNP
rs796993876 655 dbSNP
rs988731060 665 dbSNP
rs965390331 667 dbSNP
rs1315106246 671 dbSNP
rs1433762457 678 dbSNP
rs1362935480 685 dbSNP
rs1322539706 690 dbSNP
rs1431413609 705 dbSNP
rs538719266 708 dbSNP
rs1471449828 711 dbSNP
rs1403766980 715 dbSNP
rs972981780 715 dbSNP
rs1416292781 717 dbSNP
rs1164262105 727 dbSNP
rs1161120561 728 dbSNP
rs1449012078 729 dbSNP
rs918856590 729 dbSNP
rs1412514110 730 dbSNP
rs1486497199 737 dbSNP
rs185315561 738 dbSNP
rs569287816 753 dbSNP
rs955207339 761 dbSNP
rs1436604496 763 dbSNP
rs1297213266 764 dbSNP
rs529729226 777 dbSNP
rs1358031082 788 dbSNP
rs948434176 795 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001007794 | 3UTR | AGGAAAGAAAGUAACAUAUUAAGGAGAAUGGGGGUGGAUAAGAACAAAUAUAAUUUAUAAUAAUCAAUGUUGUAUAACUUUUAUUCUUUAUUAUUGGUAACACGCCCUAACUAUCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001007794 | 3UTR | AAAUAUAAUUUAUAAUAAUCAAUGUUGUAUAACUUUUAUUCUUUAUUAUUGGUAACACGCCCUAACUAUCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001007794 | 3UTR | UGGGGGUGGAUAAGAACAAAUAUAAUUUAUAAUAAUCAAUGUUGUAUAACUUUUAUUCUUUAUUAUUGGUAACACGCCCUAACUAUCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_001007794 | 3UTR | AACAAAUAUAAUUUAUAAUAAUCAAUGUUGUAUAACUUUUAUUCUUUAUUAUUGGUAACACGCCCUAACUAUCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_001007794 | 3UTR | AAUGUUGUAUAACUUUUAUUCUUUAUUAUUGGUAACACGCCCUAACUAUCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_001007794 | 3UTR | CAUAUUAAGGAGAAUGGGGGUGGAUAAGAACAAAUAUAAUUUAUAAUAAUCAAUGUUGUAUAACUUUUAUUCUUUAUUAUUGGUAACACGCCCUAACUAUCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000545121.1 | 3UTR | UCAAGCUUUCUUUACUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000545121.1 | 3UTR | UCAAGCUUUCUUUACUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
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174 hsa-miR-3133 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057804 SLC30A7 solute carrier family 30 member 7 2 2
MIRT075401 ZFHX3 zinc finger homeobox 3 2 2
MIRT088350 MAPRE3 microtubule associated protein RP/EB family member 3 2 6
MIRT107288 FAM73B mitoguardin 2 2 2
MIRT141571 ABHD2 abhydrolase domain containing 2 2 2
MIRT161036 CDV3 CDV3 homolog 2 2
MIRT167732 RNF146 ring finger protein 146 8 3
MIRT209559 PAK2 p21 (RAC1) activated kinase 2 2 2
MIRT214631 SMAD5 SMAD family member 5 2 8
MIRT258393 KIAA0895 KIAA0895 2 2
MIRT272744 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT309347 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 6
MIRT329705 SCD stearoyl-CoA desaturase 2 2
MIRT336556 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT363351 AGO2 argonaute 2, RISC catalytic component 2 4
MIRT386753 TAOK1 TAO kinase 1 2 2
MIRT441580 EXOC5 exocyst complex component 5 2 2
MIRT441735 SEPT8 septin 8 2 2
MIRT441817 LRRC40 leucine rich repeat containing 40 2 2
MIRT442180 TRIM59 tripartite motif containing 59 2 4
MIRT442277 TLX3 T-cell leukemia homeobox 3 2 2
MIRT442489 TBC1D19 TBC1 domain family member 19 2 2
MIRT443242 ANKRD26 ankyrin repeat domain 26 2 2
MIRT443270 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT444114 CEPT1 choline/ethanolamine phosphotransferase 1 2 2
MIRT444725 LAMA2 laminin subunit alpha 2 2 2
MIRT445346 FAM169A family with sequence similarity 169 member A 2 2
MIRT445693 GJB1 gap junction protein beta 1 2 2
MIRT446051 CDC73 cell division cycle 73 2 2
MIRT447746 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT447955 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT449199 ZNF623 zinc finger protein 623 2 2
MIRT449564 GPC5 glypican 5 2 2
MIRT450938 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT459811 POTED POTE ankyrin domain family member D 2 8
MIRT461692 ZNF426 zinc finger protein 426 2 2
MIRT462014 SNRNP27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 2 2
MIRT465150 TSC22D2 TSC22 domain family member 2 2 2
MIRT467144 SREK1IP1 SREK1 interacting protein 1 2 2
MIRT474929 KCTD15 potassium channel tetramerization domain containing 15 2 8
MIRT475118 IPPK inositol-pentakisphosphate 2-kinase 2 2
MIRT476844 FIGN fidgetin, microtubule severing factor 2 10
MIRT477336 EPHA2 EPH receptor A2 2 2
MIRT477853 DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 2 2
MIRT481113 B2M beta-2-microglobulin 2 2
MIRT481296 ATP6V1B2 ATPase H+ transporting V1 subunit B2 2 10
MIRT485094 SLC30A1 solute carrier family 30 member 1 2 4
MIRT491908 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 2 2
MIRT492458 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 8
MIRT493341 LAPTM4A lysosomal protein transmembrane 4 alpha 2 12
MIRT494771 AP1G1 adaptor related protein complex 1 gamma 1 subunit 2 2
MIRT497837 GPR26 G protein-coupled receptor 26 2 2
MIRT497958 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT498445 INO80D INO80 complex subunit D 2 2
MIRT498997 HAT1 histone acetyltransferase 1 2 10
MIRT499257 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT500067 SFT2D2 SFT2 domain containing 2 2 4
MIRT501385 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT503084 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503272 SLC7A5 solute carrier family 7 member 5 2 2
MIRT504341 ASGR2 asialoglycoprotein receptor 2 2 2
MIRT505453 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 6
MIRT505905 RIMS3 regulating synaptic membrane exocytosis 3 2 6
MIRT507917 C7orf60 base methyltransferase of 25S rRNA 2 homolog 2 6
MIRT508174 FRK fyn related Src family tyrosine kinase 2 4
MIRT508287 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 4
MIRT509232 KIF14 kinesin family member 14 2 6
MIRT509481 GNL3L G protein nucleolar 3 like 2 6
MIRT509530 INTU inturned planar cell polarity protein 2 6
MIRT509548 BTLA B and T lymphocyte associated 2 8
MIRT511328 KIAA1522 KIAA1522 2 4
MIRT511427 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 4
MIRT511477 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 4
MIRT512471 CCDC149 coiled-coil domain containing 149 2 2
MIRT512996 SEZ6L seizure related 6 homolog like 2 2
MIRT514755 ACER3 alkaline ceramidase 3 2 8
MIRT515764 KRTAP5-6 keratin associated protein 5-6 2 2
MIRT517392 TBK1 TANK binding kinase 1 2 4
MIRT518720 FTH1 ferritin heavy chain 1 2 2
MIRT521923 PHIP pleckstrin homology domain interacting protein 2 4
MIRT522849 KIAA2022 neurite extension and migration factor 2 4
MIRT522887 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT523153 HNRNPU heterogeneous nuclear ribonucleoprotein U 2 2
MIRT525149 ZNF256 zinc finger protein 256 2 2
MIRT525941 C11orf74 chromosome 11 open reading frame 74 2 2
MIRT526876 ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 2 2
MIRT527366 KRTAP13-2 keratin associated protein 13-2 2 2
MIRT527549 DLGAP5 DLG associated protein 5 2 4
MIRT527604 ANKRD42 ankyrin repeat domain 42 2 2
MIRT527803 KLRD1 killer cell lectin like receptor D1 2 2
MIRT528046 PRKD3 protein kinase D3 2 2
MIRT528397 PGK1 phosphoglycerate kinase 1 2 2
MIRT529673 SLC28A1 solute carrier family 28 member 1 2 2
MIRT530358 HPSE heparanase 2 2
MIRT530908 KIAA1161 myogenesis regulating glycosidase (putative) 2 2
MIRT531169 ZNF333 zinc finger protein 333 2 2
MIRT531438 PAK1 p21 (RAC1) activated kinase 1 2 2
MIRT531562 CENPC1P1 centromere protein C pseudogene 1 1 1
MIRT532783 LDHD lactate dehydrogenase D 2 2
MIRT532848 ZNF699 zinc finger protein 699 2 2
MIRT534287 SLC12A7 solute carrier family 12 member 7 2 2
MIRT535078 PPIG peptidylprolyl isomerase G 2 4
MIRT535968 MFAP3L microfibril associated protein 3 like 2 2
MIRT536163 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT537417 FBXO47 F-box protein 47 2 2
MIRT538665 CCSAP centriole, cilia and spindle associated protein 2 2
MIRT540291 RGR retinal G protein coupled receptor 2 4
MIRT543332 KIAA1456 KIAA1456 2 2
MIRT543392 CC2D2A coiled-coil and C2 domain containing 2A 2 2
MIRT543891 AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 2 2
MIRT545609 SIGLEC9 sialic acid binding Ig like lectin 9 2 2
MIRT545839 ZNF275 zinc finger protein 275 2 2
MIRT546689 RORA RAR related orphan receptor A 2 4
MIRT547513 MAT2A methionine adenosyltransferase 2A 2 4
MIRT549431 ACVR1 activin A receptor type 1 2 2
MIRT550567 MYC MYC proto-oncogene, bHLH transcription factor 2 4
MIRT552517 ZIC5 Zic family member 5 2 2
MIRT552743 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT552942 VKORC1L1 vitamin K epoxide reductase complex subunit 1 like 1 2 2
MIRT555752 PDCD10 programmed cell death 10 2 2
MIRT558002 FAM160B1 family with sequence similarity 160 member B1 2 2
MIRT559422 ASF1B anti-silencing function 1B histone chaperone 2 2
MIRT560276 SF1 splicing factor 1 2 2
MIRT560713 ZNF324B zinc finger protein 324B 2 2
MIRT561190 TNFRSF10A TNF receptor superfamily member 10a 2 2
MIRT561817 NUP50 nucleoporin 50 2 2
MIRT562018 LCLAT1 lysocardiolipin acyltransferase 1 2 2
MIRT562847 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT563252 SETD6 SET domain containing 6 2 2
MIRT563978 GCC2 GRIP and coiled-coil domain containing 2 2 2
MIRT564383 BAAT bile acid-CoA:amino acid N-acyltransferase 2 2
MIRT566552 PANK3 pantothenate kinase 3 2 2
MIRT566933 LIN28B lin-28 homolog B 2 2
MIRT566989 LBR lamin B receptor 2 2
MIRT567645 EXT1 exostosin glycosyltransferase 1 2 2
MIRT568268 BICD2 BICD cargo adaptor 2 2 2
MIRT571407 MED4 mediator complex subunit 4 2 2
MIRT571784 PPP2CA protein phosphatase 2 catalytic subunit alpha 2 2
MIRT572437 ATM ATM serine/threonine kinase 2 2
MIRT573613 COX6A1P2 cytochrome c oxidase subunit 6A1 pseudogene 2 2 2
MIRT574289 COX6A1 cytochrome c oxidase subunit 6A1 2 2
MIRT574375 YY1 YY1 transcription factor 2 2
MIRT613142 DSEL dermatan sulfate epimerase-like 2 2
MIRT616661 ORAI1 ORAI calcium release-activated calcium modulator 1 2 2
MIRT619345 SASH1 SAM and SH3 domain containing 1 2 2
MIRT626315 ABCC9 ATP binding cassette subfamily C member 9 2 2
MIRT628235 FAM117B family with sequence similarity 117 member B 2 2
MIRT630452 GTPBP8 GTP binding protein 8 (putative) 2 2
MIRT631013 TMEM30B transmembrane protein 30B 2 2
MIRT637315 FBXO18 F-box protein, helicase, 18 2 2
MIRT640658 FRY FRY microtubule binding protein 2 2
MIRT642081 FUT11 fucosyltransferase 11 2 2
MIRT644607 C17orf77 chromosome 17 open reading frame 77 2 2
MIRT644829 DNAJC21 DnaJ heat shock protein family (Hsp40) member C21 2 2
MIRT652465 TMEM2 transmembrane protein 2 2 2
MIRT657514 HAS2 hyaluronan synthase 2 2 2
MIRT658290 FAM86C1 family with sequence similarity 86 member C1 2 2
MIRT659570 CGGBP1 CGG triplet repeat binding protein 1 2 2
MIRT675457 SRP19 signal recognition particle 19 2 2
MIRT687828 ITGB8 integrin subunit beta 8 2 2
MIRT693550 MYO16 myosin XVI 2 2
MIRT697294 ZNF654 zinc finger protein 654 2 2
MIRT699804 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT704867 CD164 CD164 molecule 2 2
MIRT705309 AVL9 AVL9 cell migration associated 2 2
MIRT705323 ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 2 2
MIRT707180 HOXC4 homeobox C4 2 2
MIRT709331 CLEC12B C-type lectin domain family 12 member B 2 2
MIRT712321 PER2 period circadian clock 2 2 2
MIRT713817 XRCC2 X-ray repair cross complementing 2 2 2
MIRT713854 HHLA2 HERV-H LTR-associating 2 2 2
MIRT717257 SLC44A1 solute carrier family 44 member 1 2 2
MIRT719956 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT725408 KIF6 kinesin family member 6 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3133 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3133 Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-mir-3133 Androstenedione+Anastrozole sensitive cell line (MCF-7)
hsa-mir-3133 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3133 Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-3133 Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-3133 Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3133 Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-3133 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3133 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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