miRTarBase - #MIRT444668


—
pre-miRNA Information
pre-miRNA hsa-mir-6509   
Genomic Coordinates chr7: 135206994 - 135207078
Description Homo sapiens miR-6509 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6509-3p
Sequence 52| UUCCACUGCCACUACCUAAUUU |73
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs778601614 1 dbSNP
rs754554776 3 dbSNP
rs767798995 3 dbSNP
rs145322812 4 dbSNP
rs773941257 5 dbSNP
rs768273593 9 dbSNP
rs984565062 12 dbSNP
rs748872915 13 dbSNP
rs774861125 14 dbSNP
rs13241975 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CDKL2   
Synonyms KKIAMRE, P56
Description cyclin dependent kinase like 2
Transcript NM_003948   
Expression
Putative miRNA Targets on CDKL2
3'UTR of CDKL2
(miRNA target sites are highlighted)		 
>CDKL2|NM_003948|3'UTR
   1 GAACCATTTTGGTTCTGAACTGGATGATGCTCTTGCACTTGAGATGACATCTTCTTGCAGCAAGAGTGCTGATATCCCAA
  81 GAGGAGAGATTCATGGTTTTGATCATTTCCTTCTGAACTGCCTGCATTTTCTGAGGAAGGCCTTCTAGAAGAAGGAAAGA
 161 CAAAGACTTCCAAATGTTTCAAAGGAAGATTGAACAAATGGCCCTCCCCAACTGTTATCCCATTACCTTTCACGTCCACC
 241 GATGCTATTTCAAGACATATCCAGTGGAATAACAGTGATATGGTTCTTGTTACATGAATGTGTATTTACTGTTAGGAGAT
 321 TGTATATTTTAAGTTACCATGATTAAAAGTGTGTAAAAAAGGGGGACAGAGAGAAATACTATAAAAGGCCATGTTACTCA
 401 TGCATTGAACTTTGTGTGTTTTCTGTATAAATGTGTACATTTATTTAGGAGTGGGTTTCTTGGGGGTAGGTGATAAAAAT
 481 TAGGATCAGTTGAAGAAAATTGAAGAAACTAGGATCAGTAAGAGAAACTGTTTGCTTTACCTGAATTTAACTATGAAAAC
 561 ACACTTAACAATCTTACACGTTTCTAGATATTAAGTGAATATGTAACTCCTGTCCATGGGTAGATGTGTATCTTTGACTT
 641 CTGTAATTATTTTTGATATTCTATCAGTGTATTATGAGACTCTGGCCTCCCTGCAGATCTTCTAAGAACCACACTAATGC
 721 AAGCGTGACAGAGAAACCTCTTTCGAATGACTTACTACAACTCTGGCATTGGTTAGTTCCATGTATTGTAAGATTCTGGT
 801 GCTAATGCTCCATACAGAATTGATCAGGACTGATTACTCTTCTGTGGACCAATTGCTATTGAACTACCCAGCTGAAGAGG
 881 GTTTGGGGAGAGAACGTTCATTATTATGGACTCCACTTTTGTCCCCTGGTAGTTTAAGGGTGATACTAGAATCCAGAGAA
 961 GTTCCTGTCTCCTTGTGGCCTCAAACACTCAGGCCGTCTCAAAAGCTTTTCACCAAGGTGCAAAATCATTTACCTGCATT
1041 CCACACATCTTTTCCAATGCATGGATCCAAAACTTTTTAGGTGGGAGGAATAAACTAAGTTGGCTACAGGTTCTTGATTT
1121 CTGGGTTTCTACACATGCTCTGCATTTATCATTTTAGAGAATGGTTGTTTAGGGAACCAGAATTTGTGAGTTTTTTTTTT
1201 TTTTTTGCCTTAACTAATTAATAGTGTGTTGCTTTTTTTCCAAAGCCATTGACTAGAACTTAGCTGAAGAATTTAACTAG
1281 AACTTTTCTTTATTACTCTGAGGAGCTTAATACTGAAATTCTGACCTTGGATATTTAAGCCTCAAAAGAGTAGGACATTC
1361 AAGAGGAGGCAAATAAGGGGTTTCAATGTACAAGTCTATAGGTGGTGGTTAAATTAAAATTGGTCTTGATTTAAAAGCTC
1441 TACTTTTAATCTGTGACCAGCTGTTTGACAACATTAGTATGGATAACATGCTGAAAAAACTAGGGTATCAGCATTAATAG
1521 GCTGCATATTAAAAAGTTACTACTTTATTTTTACTTTGAAAAACACTGCCAATAGATTCTGCAGCATGGCAAACAGGTAA
1601 TACTTAAAGCCAAATGGCGCTTCGGCTTATTTCAATACTATTTTTATGTAAAGATCAGTGTGAGAATATCAGCTCAATGG
1681 TTGAGGTTCTAGGATCAATTGCCTTGCAGTTTTTATACTAGCTTTTGATATCTTTTGCCTATTAAAACACTTTGTGAACT
1761 TTAGAATTAAGGAACTAAAAAATATTTACCATAAGTCCAAGTTATGACTTGAGGATCATATCTGATTAGAACTGTGGCAG
1841 AACTACTAGAAAAAGATTCTGCAAATTGGTTTCAGTGATTCTTGTTGATGTAATCAACAAGATTACATAATCAACAATAA
1921 TAGATATTGAACCAAAATGATCCTTTTTTTAAGTTTAAGGTTATTTAGTTTCTCTTGCAAGGATATGATTTAGTCACACA
2001 CTAATAGGGAATATGTGTATGTACTGGTGGGGAGCAGTGGGCTTGCTGCATGTATGTATGTTTTAAAATTAATAAATATT
2081 ATCTTACTGGGCTCCATAGATGGTTTAAATTTAGATTTATTTAATTAAGAGGCTATAAATAATATATACACTACTGTATG
2161 GTATTTAACAAATAAGTTTTAAATCTGTTAATTCTTCTGGAAAACTTTGGATGTAGGGATGGCAAGCTAATTTTCTTGTA
2241 TAGCTGGTGATATAAGCAGCATGGTCATAAAATAACATTTCTTATAAAGACTAACTGGTAATAGTTGTGACAGAACCTGG
2321 TTTTCCTGACTGAGAATCCCTTGCTTGCTTAGAATATCTGACTTCCCATTGAAATGGAACATAGAAAATGTGTTTTCTTA
2401 TGTGACTCTCATTATTGGTTCCTTTATCTTAGTTGTGCTACAATATAAGGCTGGACCTGTAATACACTATGTATCAGACT
2481 AGACTGAAAAATGTGATCGATTTGTTTTCTAAGTCCTCCTCTATATAACTGAACCATGGTCAGGGGATTAGAGAAGCAAC
2561 AGAGCACTGCTCCTAAGGCTTTAGGCTAGTCTTAGTGAATTGGACTGAATGGATTTTTCTCTGTTGTTTTTTGCATTAAG
2641 TGTTTTTGCACTAGAAGAGGGTGCTTAACACTCCTCTATCTATATGAATAAAAAATTATGTTCTCACAAAAAAAAAAAAA
2721 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuUA-AU--CCAUCAC-CGUCACCUu 5'
            || ||  |||:| | |||||||: 
Target 5' gtATGTACTGGTGGGGAGCAGTGGGc 3'
 2017 - 2042 146.00 -18.50
2 
miRNA  3' uuuaauccaucaccGUCACCUu 5'
                        ||||||| 
Target 5' tttcaagacatatcCAGTGGAa 3'
 248 - 269 140.00 -11.10
3 
miRNA  3' uuuAAUCCAUCAC-CGUCAC-CUu 5'
             ||| |||  |  ||||| || 
Target 5' tttTTATGTAAAGATCAGTGTGAg 3'
 1641 - 1664 123.00 -7.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30101934 1 COSMIC
COSN19517254 112 COSMIC
COSN22308392 652 COSMIC
COSN16222161 1124 COSMIC
COSN22974763 1693 COSMIC
COSN21369501 1744 COSMIC
COSN16883775 1777 COSMIC
COSN23133556 2160 COSMIC
COSN27898514 2306 COSMIC
COSN2044777 2523 COSMIC
COSN2044776 2524 COSMIC
COSN26816925 2570 COSMIC
COSN31609993 2819 COSMIC
COSN26550371 2857 COSMIC
COSN21925072 2939 COSMIC
COSN31606532 3129 COSMIC
COSN21436599 3376 COSMIC
COSN10035130 3669 COSMIC
COSN9241575 3793 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1439684123 4 dbSNP
rs755394622 5 dbSNP
rs1390042700 11 dbSNP
rs373079262 17 dbSNP
rs766836759 23 dbSNP
rs761291818 24 dbSNP
rs1173996434 26 dbSNP
rs750856832 26 dbSNP
rs1428196925 31 dbSNP
rs767659233 33 dbSNP
rs761742054 35 dbSNP
rs1362426437 41 dbSNP
rs774637960 43 dbSNP
rs1252334375 44 dbSNP
rs768936610 46 dbSNP
rs1051491998 62 dbSNP
rs1166715673 66 dbSNP
rs1394734565 67 dbSNP
rs929042743 68 dbSNP
rs545359994 76 dbSNP
rs1291314909 81 dbSNP
rs200930456 85 dbSNP
rs1397944796 87 dbSNP
rs1391904675 92 dbSNP
rs1328100470 93 dbSNP
rs1348467064 94 dbSNP
rs766641207 96 dbSNP
rs1266789913 98 dbSNP
rs1334481801 102 dbSNP
rs775831218 102 dbSNP
rs913159131 102 dbSNP
rs577966672 104 dbSNP
rs193299593 110 dbSNP
rs915821641 112 dbSNP
rs534680706 113 dbSNP
rs567763690 115 dbSNP
rs1189051558 120 dbSNP
rs1417539730 135 dbSNP
rs1474686569 136 dbSNP
rs1162186936 138 dbSNP
rs1396733073 149 dbSNP
rs1462041398 152 dbSNP
rs1297591785 153 dbSNP
rs1004067427 155 dbSNP
rs1416503356 163 dbSNP
rs1228207762 164 dbSNP
rs886495343 176 dbSNP
rs1394514207 181 dbSNP
rs769911595 181 dbSNP
rs997489520 183 dbSNP
rs1300186541 191 dbSNP
rs1232753762 193 dbSNP
rs900543072 196 dbSNP
rs1330977094 204 dbSNP
rs960356852 212 dbSNP
rs552581663 213 dbSNP
rs776712007 214 dbSNP
rs977531828 218 dbSNP
rs967439524 219 dbSNP
rs112229293 220 dbSNP
rs1012173648 231 dbSNP
rs1387734599 233 dbSNP
rs934836870 240 dbSNP
rs537145474 243 dbSNP
rs187440339 245 dbSNP
rs981637521 251 dbSNP
rs1290902222 255 dbSNP
rs969741684 257 dbSNP
rs1381820060 263 dbSNP
rs915591057 263 dbSNP
rs1171471867 266 dbSNP
rs973967437 275 dbSNP
rs72869638 285 dbSNP
rs1378107229 293 dbSNP
rs1015537217 295 dbSNP
rs1218352748 303 dbSNP
rs1004008358 310 dbSNP
rs1486004256 315 dbSNP
rs1187481128 319 dbSNP
rs1434970410 328 dbSNP
rs369585366 334 dbSNP
rs1008470888 338 dbSNP
rs1455191032 350 dbSNP
rs1204704628 361 dbSNP
rs1030407109 365 dbSNP
rs1394379037 367 dbSNP
rs1431268682 374 dbSNP
rs890144739 379 dbSNP
rs900480109 380 dbSNP
rs72869636 387 dbSNP
rs142656589 391 dbSNP
rs1318706660 397 dbSNP
rs1044047246 400 dbSNP
rs993099984 403 dbSNP
rs1303369906 408 dbSNP
rs1366159492 412 dbSNP
rs1053309581 419 dbSNP
rs1344973337 424 dbSNP
rs897591991 427 dbSNP
rs1308177391 431 dbSNP
rs1316633422 432 dbSNP
rs761768672 437 dbSNP
rs934823843 438 dbSNP
rs1469456456 440 dbSNP
rs1213737837 442 dbSNP
rs566217002 457 dbSNP
rs928837234 463 dbSNP
rs1234855813 466 dbSNP
rs1333483537 503 dbSNP
rs941859761 505 dbSNP
rs1418277311 510 dbSNP
rs7699659 522 dbSNP
rs1420255701 524 dbSNP
rs564362306 535 dbSNP
rs938598796 538 dbSNP
rs1348143076 547 dbSNP
rs1444995643 551 dbSNP
rs928644609 552 dbSNP
rs973710343 553 dbSNP
rs1226917248 555 dbSNP
rs962372232 561 dbSNP
rs977440447 565 dbSNP
rs528110703 568 dbSNP
rs528177113 569 dbSNP
rs778785775 580 dbSNP
rs1449303702 584 dbSNP
rs1402899924 607 dbSNP
rs1206618000 608 dbSNP
rs1233369316 610 dbSNP
rs1482630993 613 dbSNP
rs372693398 618 dbSNP
rs914669000 633 dbSNP
rs955230538 641 dbSNP
rs549144158 660 dbSNP
rs1409864430 665 dbSNP
rs1162821310 667 dbSNP
rs990246243 669 dbSNP
rs1029931797 673 dbSNP
rs1171789788 674 dbSNP
rs964593328 688 dbSNP
rs975288688 689 dbSNP
rs368972584 704 dbSNP
rs530610120 706 dbSNP
rs563479792 713 dbSNP
rs545177606 714 dbSNP
rs1415019171 715 dbSNP
rs374676832 723 dbSNP
rs1025822812 730 dbSNP
rs1017648023 731 dbSNP
rs1011499993 741 dbSNP
rs893174174 766 dbSNP
rs1186312964 773 dbSNP
rs993130880 775 dbSNP
rs577889555 780 dbSNP
rs1341400808 791 dbSNP
rs1202871281 792 dbSNP
rs1259360924 793 dbSNP
rs541267181 796 dbSNP
rs1187178921 804 dbSNP
rs1442191522 809 dbSNP
rs1476454304 811 dbSNP
rs1280032049 817 dbSNP
rs1202720189 818 dbSNP
rs999087222 824 dbSNP
rs1349105415 829 dbSNP
rs1266974876 832 dbSNP
rs1005963037 841 dbSNP
rs559351066 842 dbSNP
rs541302137 843 dbSNP
rs560610011 844 dbSNP
rs573998687 846 dbSNP
rs1432399784 847 dbSNP
rs907133992 848 dbSNP
rs1226179099 853 dbSNP
rs1282365959 854 dbSNP
rs1348386386 855 dbSNP
rs1199632649 873 dbSNP
rs1340852427 878 dbSNP
rs1041624044 881 dbSNP
rs578098041 886 dbSNP
rs553276996 887 dbSNP
rs1158572398 889 dbSNP
rs911964065 890 dbSNP
rs557954299 891 dbSNP
rs1477967382 897 dbSNP
rs1171215172 898 dbSNP
rs1161673933 905 dbSNP
rs1402092943 908 dbSNP
rs1472559221 909 dbSNP
rs1387347891 911 dbSNP
rs539613255 912 dbSNP
rs566249981 914 dbSNP
rs547805140 916 dbSNP
rs536142442 917 dbSNP
rs1284910951 919 dbSNP
rs911271883 924 dbSNP
rs986998979 929 dbSNP
rs955504447 931 dbSNP
rs1247931273 932 dbSNP
rs1463636480 934 dbSNP
rs182879441 936 dbSNP
rs972956279 942 dbSNP
rs961721443 943 dbSNP
rs548956112 947 dbSNP
rs1365986482 948 dbSNP
rs530622353 949 dbSNP
rs1227395859 954 dbSNP
rs1410732361 955 dbSNP
rs1356547644 959 dbSNP
rs1285761407 963 dbSNP
rs1455278830 966 dbSNP
rs1006408201 971 dbSNP
rs563343892 972 dbSNP
rs1364433593 974 dbSNP
rs62320976 975 dbSNP
rs1002716725 976 dbSNP
rs1390929524 979 dbSNP
rs1321619326 981 dbSNP
rs1327373115 983 dbSNP
rs575705863 983 dbSNP
rs906998063 984 dbSNP
rs1041688058 986 dbSNP
rs1448034643 987 dbSNP
rs1010141842 988 dbSNP
rs1438798130 990 dbSNP
rs893165075 994 dbSNP
rs533013596 1000 dbSNP
rs1244496521 1002 dbSNP
rs1471412536 1004 dbSNP
rs908245204 1007 dbSNP
rs942666778 1008 dbSNP
rs1451858850 1009 dbSNP
rs1368608090 1019 dbSNP
rs1456953043 1029 dbSNP
rs1291550275 1031 dbSNP
rs1398501255 1032 dbSNP
rs1410312499 1035 dbSNP
rs1193917503 1037 dbSNP
rs1341188129 1038 dbSNP
rs1297973747 1039 dbSNP
rs555770545 1040 dbSNP
rs1230550961 1042 dbSNP
rs1368650711 1045 dbSNP
rs545381856 1046 dbSNP
rs1205002461 1047 dbSNP
rs1435820226 1049 dbSNP
rs1272939512 1054 dbSNP
rs933928085 1055 dbSNP
rs1189693537 1057 dbSNP
rs1325773080 1063 dbSNP
rs866094879 1064 dbSNP
rs559475637 1069 dbSNP
rs577161152 1070 dbSNP
rs1451911097 1071 dbSNP
rs554169438 1072 dbSNP
rs1303684180 1080 dbSNP
rs1190174691 1081 dbSNP
rs986255906 1082 dbSNP
rs1478061604 1085 dbSNP
rs1248162042 1092 dbSNP
rs1179572933 1093 dbSNP
rs71607323 1094 dbSNP
rs1228396141 1096 dbSNP
rs1275128439 1101 dbSNP
rs1206998807 1102 dbSNP
rs1310420270 1106 dbSNP
rs1277814302 1107 dbSNP
rs1198308303 1109 dbSNP
rs1218795079 1110 dbSNP
rs1368409061 1114 dbSNP
rs1276633416 1118 dbSNP
rs1455502748 1119 dbSNP
rs1176553085 1123 dbSNP
rs1464734360 1124 dbSNP
rs200171892 1124 dbSNP
rs1290851155 1125 dbSNP
rs1481377541 1125 dbSNP
rs1389546335 1127 dbSNP
rs1434428988 1127 dbSNP
rs189960346 1130 dbSNP
rs1373863358 1132 dbSNP
rs1220266720 1133 dbSNP
rs1269609359 1139 dbSNP
rs1301026739 1139 dbSNP
rs368796538 1139 dbSNP
rs975614762 1140 dbSNP
rs1207592228 1142 dbSNP
rs1245616422 1159 dbSNP
rs1309056455 1167 dbSNP
rs1191632641 1168 dbSNP
rs573839625 1170 dbSNP
rs1424281730 1175 dbSNP
rs1431988242 1176 dbSNP
rs963921419 1183 dbSNP
rs1161612763 1191 dbSNP
rs1412933719 1193 dbSNP
rs1357984627 1199 dbSNP
rs1051577747 1203 dbSNP
rs113737108 1204 dbSNP
rs934200196 1209 dbSNP
rs918747831 1210 dbSNP
rs1393469751 1212 dbSNP
rs1179338073 1214 dbSNP
rs543387049 1217 dbSNP
rs1227337834 1218 dbSNP
rs1472083776 1225 dbSNP
rs1265704771 1229 dbSNP
rs1322992073 1236 dbSNP
rs1222286139 1242 dbSNP
rs1252061852 1244 dbSNP
rs1184150115 1251 dbSNP
rs972988846 1252 dbSNP
rs1184116078 1253 dbSNP
rs1031662202 1260 dbSNP
rs576147136 1263 dbSNP
rs1420186967 1265 dbSNP
rs962916026 1266 dbSNP
rs557867634 1269 dbSNP
rs539902083 1273 dbSNP
rs572596449 1279 dbSNP
rs1463940258 1284 dbSNP
rs958583437 1285 dbSNP
rs1034108595 1286 dbSNP
rs78864723 1287 dbSNP
rs775768131 1289 dbSNP
rs1328803771 1291 dbSNP
rs1286054036 1302 dbSNP
rs894679758 1307 dbSNP
rs971245541 1310 dbSNP
rs1038121163 1311 dbSNP
rs1020108936 1321 dbSNP
rs941111336 1324 dbSNP
rs886758721 1331 dbSNP
rs535780409 1332 dbSNP
rs1482599562 1336 dbSNP
rs1180355849 1337 dbSNP
rs1473226115 1341 dbSNP
rs777560965 1342 dbSNP
rs568687743 1343 dbSNP
rs1302572386 1346 dbSNP
rs1181380573 1353 dbSNP
rs1411651105 1354 dbSNP
rs933676915 1359 dbSNP
rs1010048407 1360 dbSNP
rs1169780565 1368 dbSNP
rs1449426564 1380 dbSNP
rs975391741 1381 dbSNP
rs942526333 1393 dbSNP
rs754109742 1396 dbSNP
rs115298558 1397 dbSNP
rs1006893196 1399 dbSNP
rs537009024 1403 dbSNP
rs889781597 1406 dbSNP
rs1051156590 1408 dbSNP
rs569652141 1409 dbSNP
rs1280420047 1430 dbSNP
rs1456237732 1430 dbSNP
rs934064500 1437 dbSNP
rs71203827 1443 dbSNP
rs1412341369 1449 dbSNP
rs977786331 1451 dbSNP
rs1451391979 1453 dbSNP
rs1421632831 1456 dbSNP
rs185552806 1470 dbSNP
rs971429791 1476 dbSNP
rs1174699900 1491 dbSNP
rs918778915 1497 dbSNP
rs182623519 1498 dbSNP
rs1182197508 1508 dbSNP
rs1484216038 1509 dbSNP
rs1356980973 1518 dbSNP
rs1436607623 1533 dbSNP
rs772423779 1540 dbSNP
rs1206965853 1546 dbSNP
rs190471058 1548 dbSNP
rs187166181 1550 dbSNP
rs1276405095 1559 dbSNP
rs1345451248 1563 dbSNP
rs142753931 1571 dbSNP
rs374207158 1571 dbSNP
rs1320090488 1575 dbSNP
rs1312513266 1579 dbSNP
rs780973925 1580 dbSNP
rs1209471751 1582 dbSNP
rs1247437208 1590 dbSNP
rs1046821575 1591 dbSNP
rs1385699430 1593 dbSNP
rs1201558395 1594 dbSNP
rs1477893432 1601 dbSNP
rs1319128241 1602 dbSNP
rs1171679650 1611 dbSNP
rs998254063 1613 dbSNP
rs958440401 1622 dbSNP
rs1458443833 1627 dbSNP
rs926946243 1630 dbSNP
rs1159281736 1639 dbSNP
rs1387198165 1656 dbSNP
rs981210108 1671 dbSNP
rs146229663 1674 dbSNP
rs754598415 1678 dbSNP
rs1020014328 1682 dbSNP
rs1331516257 1684 dbSNP
rs143385852 1687 dbSNP
rs1272813087 1697 dbSNP
rs915172602 1698 dbSNP
rs766806324 1700 dbSNP
rs1327155609 1701 dbSNP
rs1053527512 1710 dbSNP
rs1268631947 1716 dbSNP
rs1367496046 1718 dbSNP
rs1451499987 1721 dbSNP
rs1197228381 1730 dbSNP
rs1254349407 1733 dbSNP
rs1473373191 1736 dbSNP
rs1182451223 1742 dbSNP
rs758870261 1766 dbSNP
rs1165273562 1779 dbSNP
rs1425319324 1782 dbSNP
rs1164969211 1785 dbSNP
rs1388318280 1792 dbSNP
rs543299433 1797 dbSNP
rs1449939835 1801 dbSNP
rs1301075591 1802 dbSNP
rs1248746851 1803 dbSNP
rs1206930803 1818 dbSNP
rs181936113 1821 dbSNP
rs750783066 1823 dbSNP
rs977566551 1824 dbSNP
rs1266058485 1827 dbSNP
rs1265071704 1833 dbSNP
rs1356278293 1838 dbSNP
rs1222858739 1842 dbSNP
rs532547962 1849 dbSNP
rs889822973 1855 dbSNP
rs777495504 1867 dbSNP
rs1295789244 1868 dbSNP
rs1182517420 1875 dbSNP
rs917279360 1892 dbSNP
rs998119114 1894 dbSNP
rs769262689 1900 dbSNP
rs897259109 1902 dbSNP
rs57787468 1917 dbSNP
rs992137400 1923 dbSNP
rs1189040742 1925 dbSNP
rs958913976 1941 dbSNP
rs1037044683 1949 dbSNP
rs1005691102 1951 dbSNP
rs114263116 1960 dbSNP
rs1307137993 1963 dbSNP
rs1394635548 1965 dbSNP
rs572461298 1965 dbSNP
rs566826119 1966 dbSNP
rs1339944914 1969 dbSNP
rs747796933 1970 dbSNP
rs1244499034 1977 dbSNP
rs1300420030 1979 dbSNP
rs1055416703 1980 dbSNP
rs554073168 1987 dbSNP
rs1204928717 1990 dbSNP
rs1025814248 1998 dbSNP
rs1479459662 2000 dbSNP
rs1201748754 2009 dbSNP
rs1256329147 2022 dbSNP
rs997970395 2023 dbSNP
rs1181728685 2024 dbSNP
rs1391985346 2036 dbSNP
rs139940160 2046 dbSNP
rs900822483 2047 dbSNP
rs1371061695 2048 dbSNP
rs1039343148 2051 dbSNP
rs938242285 2052 dbSNP
rs928175681 2053 dbSNP
rs116886417 2059 dbSNP
rs935156252 2085 dbSNP
rs1228231883 2102 dbSNP
rs1293882795 2113 dbSNP
rs9685133 2116 dbSNP
rs1235032982 2134 dbSNP
rs1256199703 2139 dbSNP
rs1460516926 2144 dbSNP
rs1201255754 2155 dbSNP
rs1368485784 2157 dbSNP
rs1167676419 2161 dbSNP
rs190684715 2162 dbSNP
rs1259473019 2164 dbSNP
rs371460043 2165 dbSNP
rs776879922 2169 dbSNP
rs988556015 2170 dbSNP
rs1377318407 2177 dbSNP
rs1431509206 2178 dbSNP
rs1161476212 2183 dbSNP
rs1266679829 2184 dbSNP
rs1389378450 2189 dbSNP
rs1435092395 2195 dbSNP
rs376841301 2196 dbSNP
rs1490888626 2198 dbSNP
rs1272979433 2200 dbSNP
rs1387676591 2201 dbSNP
rs1300960720 2202 dbSNP
rs1204852701 2216 dbSNP
rs1221235025 2217 dbSNP
rs1033246431 2220 dbSNP
rs751588289 2224 dbSNP
rs1253578691 2225 dbSNP
rs1230518809 2226 dbSNP
rs1258865085 2227 dbSNP
rs1330004020 2232 dbSNP
rs879597172 2233 dbSNP
rs1266332744 2240 dbSNP
rs1479580374 2241 dbSNP
rs1412866239 2248 dbSNP
rs954117971 2283 dbSNP
rs1456753627 2284 dbSNP
rs1042173936 2285 dbSNP
rs1029507070 2290 dbSNP
rs1293312448 2298 dbSNP
rs998149810 2299 dbSNP
rs779817501 2300 dbSNP
rs1307226280 2302 dbSNP
rs1350617432 2306 dbSNP
rs937335473 2308 dbSNP
rs1430152609 2309 dbSNP
rs200343010 2314 dbSNP
rs1170749344 2317 dbSNP
rs1465434717 2330 dbSNP
rs1377165250 2331 dbSNP
rs984412525 2334 dbSNP
rs1252769104 2341 dbSNP
rs1015671814 2343 dbSNP
rs1481566719 2348 dbSNP
rs1006044993 2351 dbSNP
rs1249868185 2354 dbSNP
rs888652350 2355 dbSNP
rs569713070 2358 dbSNP
rs1253013094 2361 dbSNP
rs1199256138 2370 dbSNP
rs895497165 2371 dbSNP
rs938162634 2372 dbSNP
rs906790195 2373 dbSNP
rs1344861894 2378 dbSNP
rs760804838 2383 dbSNP
rs1224781397 2384 dbSNP
rs1326710308 2388 dbSNP
rs949737710 2391 dbSNP
rs912893949 2393 dbSNP
rs1409986647 2394 dbSNP
rs988605917 2407 dbSNP
rs1337327727 2408 dbSNP
rs1331899475 2412 dbSNP
rs1440942945 2419 dbSNP
rs1277266514 2421 dbSNP
rs935732193 2422 dbSNP
rs1228874480 2424 dbSNP
rs925702110 2435 dbSNP
rs561758441 2436 dbSNP
rs757380733 2442 dbSNP
rs541155833 2445 dbSNP
rs1275025149 2451 dbSNP
rs541988349 2453 dbSNP
rs1029538320 2455 dbSNP
rs976637460 2457 dbSNP
rs764385317 2478 dbSNP
rs1202689567 2482 dbSNP
rs1015537610 2494 dbSNP
rs1483607808 2497 dbSNP
rs1470987095 2508 dbSNP
rs1383959411 2510 dbSNP
rs1451833149 2515 dbSNP
rs1018443723 2524 dbSNP
rs1409074045 2526 dbSNP
rs1006477543 2534 dbSNP
rs185817309 2539 dbSNP
rs1360434690 2541 dbSNP
rs1448082911 2548 dbSNP
rs893506498 2551 dbSNP
rs1410113787 2566 dbSNP
rs180990754 2568 dbSNP
rs188397356 2569 dbSNP
rs1213083313 2577 dbSNP
rs752891263 2583 dbSNP
rs902330381 2590 dbSNP
rs1442390331 2592 dbSNP
rs565740545 2600 dbSNP
rs1046199562 2609 dbSNP
rs1466638526 2610 dbSNP
rs1189766812 2620 dbSNP
rs1241954233 2622 dbSNP
rs1474617175 2625 dbSNP
rs767905863 2626 dbSNP
rs1257453852 2629 dbSNP
rs906696400 2629 dbSNP
rs895858834 2630 dbSNP
rs1205089102 2633 dbSNP
rs1403262517 2635 dbSNP
rs1437261497 2640 dbSNP
rs796182882 2648 dbSNP
rs1046714185 2659 dbSNP
rs1009809392 2663 dbSNP
rs1325682351 2667 dbSNP
rs891490773 2669 dbSNP
rs1428426457 2676 dbSNP
rs184109059 2677 dbSNP
rs1368595006 2681 dbSNP
rs1266875949 2694 dbSNP
rs935652810 2695 dbSNP
rs1261409227 2701 dbSNP
rs547292692 2707 dbSNP
rs1209953250 2711 dbSNP
rs1049453002 2714 dbSNP
rs932527030 2721 dbSNP
rs377061373 2724 dbSNP
rs1445735462 2726 dbSNP
rs759850404 2733 dbSNP
rs1201489799 2734 dbSNP
rs191907319 2735 dbSNP
rs774940262 2741 dbSNP
rs1243772492 2764 dbSNP
rs1341057627 2770 dbSNP
rs984359959 2778 dbSNP
rs976668696 2790 dbSNP
rs766738476 2797 dbSNP
rs762528140 2798 dbSNP
rs1480562091 2811 dbSNP
rs1338614198 2814 dbSNP
rs1426656206 2820 dbSNP
rs1055469016 2822 dbSNP
rs866483087 2827 dbSNP
rs1158602082 2838 dbSNP
rs930216769 2859 dbSNP
rs918853270 2862 dbSNP
rs952703613 2864 dbSNP
rs965936174 2865 dbSNP
rs1281585847 2867 dbSNP
rs1401532893 2867 dbSNP
rs1229121118 2871 dbSNP
rs1034217598 2872 dbSNP
rs1387374738 2873 dbSNP
rs562237362 2884 dbSNP
rs970913056 2887 dbSNP
rs1472672440 2911 dbSNP
rs1490282579 2914 dbSNP
rs1025129186 2919 dbSNP
rs957683171 2929 dbSNP
rs1448152851 2933 dbSNP
rs1031995386 2935 dbSNP
rs34764191 2936 dbSNP
rs1362648954 2938 dbSNP
rs549714190 2942 dbSNP
rs1246917902 2943 dbSNP
rs1164910961 2945 dbSNP
rs1366010378 2950 dbSNP
rs1423727565 2954 dbSNP
rs1215848197 2955 dbSNP
rs892735984 2956 dbSNP
rs1372665055 2967 dbSNP
rs1054008472 2969 dbSNP
rs531491384 2970 dbSNP
rs1334051891 2980 dbSNP
rs1000273088 2993 dbSNP
rs1247688079 2995 dbSNP
rs1285270774 2998 dbSNP
rs769414068 3012 dbSNP
rs1448424291 3023 dbSNP
rs1287292121 3027 dbSNP
rs1209085388 3045 dbSNP
rs1356788907 3049 dbSNP
rs778049271 3055 dbSNP
rs751602537 3057 dbSNP
rs1196015836 3079 dbSNP
rs1249270766 3083 dbSNP
rs1226114549 3085 dbSNP
rs62320975 3091 dbSNP
rs895013586 3096 dbSNP
rs146331817 3101 dbSNP
rs149384313 3104 dbSNP
rs374737458 3107 dbSNP
rs1040867476 3109 dbSNP
rs1394472618 3115 dbSNP
rs1397892895 3120 dbSNP
rs776392674 3121 dbSNP
rs1337417440 3131 dbSNP
rs1321834751 3143 dbSNP
rs1451014670 3162 dbSNP
rs1300354326 3164 dbSNP
rs576436501 3171 dbSNP
rs1425069701 3172 dbSNP
rs888545683 3174 dbSNP
rs1227765483 3185 dbSNP
rs138706052 3190 dbSNP
rs908455789 3197 dbSNP
rs984050903 3202 dbSNP
rs918813047 3204 dbSNP
rs1041727631 3210 dbSNP
rs74502400 3211 dbSNP
rs1428863780 3212 dbSNP
rs1390081850 3226 dbSNP
rs1371579715 3239 dbSNP
rs926630124 3243 dbSNP
rs1177255778 3247 dbSNP
rs150618558 3252 dbSNP
rs368628515 3263 dbSNP
rs746751152 3270 dbSNP
rs556791645 3274 dbSNP
rs970819762 3294 dbSNP
rs1025034371 3298 dbSNP
rs1468758692 3299 dbSNP
rs985162398 3302 dbSNP
rs780058384 3317 dbSNP
rs957753502 3326 dbSNP
rs925051189 3328 dbSNP
rs977686224 3329 dbSNP
rs758206491 3343 dbSNP
rs1033048113 3347 dbSNP
rs1224897050 3355 dbSNP
rs7668530 3356 dbSNP
rs777775409 3358 dbSNP
rs189059208 3368 dbSNP
rs1027972259 3369 dbSNP
rs555887527 3375 dbSNP
rs1486126858 3381 dbSNP
rs900936018 3391 dbSNP
rs571934000 3392 dbSNP
rs1185730133 3401 dbSNP
rs1259324014 3416 dbSNP
rs553862337 3430 dbSNP
rs535176161 3438 dbSNP
rs1428748235 3447 dbSNP
rs1275248278 3460 dbSNP
rs1479477446 3470 dbSNP
rs1215308668 3473 dbSNP
rs1346326146 3478 dbSNP
rs1341578537 3481 dbSNP
rs1287489146 3483 dbSNP
rs1273102974 3487 dbSNP
rs1436067296 3489 dbSNP
rs1346357046 3503 dbSNP
rs1006078537 3505 dbSNP
rs1221176099 3514 dbSNP
rs888493645 3520 dbSNP
rs939894813 3526 dbSNP
rs886937189 3527 dbSNP
rs1048518349 3528 dbSNP
rs1490771802 3532 dbSNP
rs1223561248 3539 dbSNP
rs994172902 3544 dbSNP
rs897186594 3552 dbSNP
rs1408728499 3554 dbSNP
rs1408377232 3563 dbSNP
rs1419073908 3566 dbSNP
rs1048819439 3595 dbSNP
rs1370557413 3606 dbSNP
rs931227154 3609 dbSNP
rs1425722002 3622 dbSNP
rs944316455 3626 dbSNP
rs1364587333 3627 dbSNP
rs1422469924 3628 dbSNP
rs926509234 3636 dbSNP
rs911485209 3645 dbSNP
rs1171438581 3650 dbSNP
rs1223192851 3657 dbSNP
rs17280791 3664 dbSNP
rs949331568 3666 dbSNP
rs936841615 3667 dbSNP
rs1482603182 3669 dbSNP
rs1233186598 3671 dbSNP
rs1206566477 3672 dbSNP
rs1233583197 3688 dbSNP
rs1310328102 3690 dbSNP
rs1176026679 3692 dbSNP
rs1487412439 3694 dbSNP
rs1245537207 3697 dbSNP
rs1276640503 3698 dbSNP
rs1445705769 3699 dbSNP
rs1163344977 3704 dbSNP
rs1222960287 3704 dbSNP
rs924997377 3714 dbSNP
rs549522241 3720 dbSNP
rs1354648208 3727 dbSNP
rs966387204 3731 dbSNP
rs537749463 3733 dbSNP
rs988222256 3740 dbSNP
rs1453204779 3741 dbSNP
rs1285422603 3743 dbSNP
rs1356990850 3752 dbSNP
rs569051045 3752 dbSNP
rs1216599153 3754 dbSNP
rs1273939836 3755 dbSNP
rs1307086675 3758 dbSNP
rs1202540118 3762 dbSNP
rs957128251 3767 dbSNP
rs1462205639 3773 dbSNP
rs747948763 3781 dbSNP
rs1241733292 3782 dbSNP
rs1265514307 3788 dbSNP
rs1032500384 3793 dbSNP
rs980118103 3797 dbSNP
rs570694172 3798 dbSNP
rs1350274606 3802 dbSNP
rs953675381 3807 dbSNP
rs1029164257 3809 dbSNP
rs1408955022 3812 dbSNP
rs1407654141 3813 dbSNP
rs1445033794 3817 dbSNP
rs1357900710 3819 dbSNP
rs1259526979 3820 dbSNP
rs202030845 3821 dbSNP
rs1033599958 3822 dbSNP
rs10684785 3822 dbSNP
rs1469857296 3823 dbSNP
rs116173056 3824 dbSNP
rs1361533005 3824 dbSNP
rs1213020907 3828 dbSNP
rs1431060716 3835 dbSNP
rs1156512785 3836 dbSNP
rs33992431 3838 dbSNP
rs878934221 3838 dbSNP
rs879007841 3838 dbSNP
rs1308626747 3839 dbSNP
rs6829402 3846 dbSNP
rs1408479024 3858 dbSNP
rs1480460997 3860 dbSNP
rs1175037026 3867 dbSNP
rs755346256 3870 dbSNP
rs1402306156 3871 dbSNP
rs1482262696 3871 dbSNP
rs573778086 3885 dbSNP
rs141986486 3888 dbSNP
rs548709249 3899 dbSNP
rs1019355371 3910 dbSNP
rs1027068210 3912 dbSNP
rs1203182884 3914 dbSNP
rs1461827700 3920 dbSNP
rs1285392938 3923 dbSNP
rs1003904402 3941 dbSNP
rs1265026988 3944 dbSNP
rs1223003100 3947 dbSNP
rs1207089985 3952 dbSNP
rs1353479249 3954 dbSNP
rs1224827147 3962 dbSNP
rs1316519564 3964 dbSNP
rs1445617194 3968 dbSNP
rs530208317 3971 dbSNP
rs1048242209 3974 dbSNP
rs994683269 3979 dbSNP
rs931110771 3987 dbSNP
rs1490397573 3989 dbSNP
rs897140650 3996 dbSNP
rs905117367 3997 dbSNP
rs751804257 3998 dbSNP
rs949405289 4000 dbSNP
rs1377705685 4005 dbSNP
rs1407026443 4009 dbSNP
rs917917175 4017 dbSNP
rs1304673653 4019 dbSNP
rs563077181 4022 dbSNP
rs1404500019 4026 dbSNP
rs544793740 4029 dbSNP
rs1337601713 4030 dbSNP
rs1453927127 4032 dbSNP
rs935412666 4034 dbSNP
rs1407688328 4060 dbSNP
rs1279458251 4070 dbSNP
rs1317909002 4075 dbSNP
rs114049918 4082 dbSNP
rs1049971941 4092 dbSNP
rs1161089196 4093 dbSNP
rs1359793284 4094 dbSNP
rs936831740 4099 dbSNP
rs1264713387 4103 dbSNP
rs979640814 4108 dbSNP
rs1439008989 4111 dbSNP
rs904056409 4117 dbSNP
rs1232253193 4119 dbSNP
rs1042128488 4127 dbSNP
rs1412713323 4130 dbSNP
rs751659839 4131 dbSNP
rs945092752 4149 dbSNP
rs953629496 4152 dbSNP
rs917694106 4157 dbSNP
rs992196059 4158 dbSNP
rs1245079317 4162 dbSNP
rs565608575 4170 dbSNP
rs368635769 4175 dbSNP
rs77237797 4188 dbSNP
rs976295568 4211 dbSNP
rs965042370 4212 dbSNP
rs1328210044 4215 dbSNP
rs1261518872 4217 dbSNP
rs1019220300 4220 dbSNP
rs984745060 4226 dbSNP
rs185297225 4228 dbSNP
rs1004262579 4234 dbSNP
rs1320299377 4240 dbSNP
rs951176072 4246 dbSNP
rs951840594 4248 dbSNP
rs1340976006 4249 dbSNP
rs1247384632 4253 dbSNP
rs1027116667 4254 dbSNP
rs193014888 4255 dbSNP
rs1294828707 4258 dbSNP
rs1026594644 4266 dbSNP
rs1381146905 4276 dbSNP
rs1362300967 4277 dbSNP
rs867758526 4277 dbSNP
rs138541328 4286 dbSNP
rs961734771 4294 dbSNP
rs1871114 4295 dbSNP
rs1375025558 4296 dbSNP
rs868020153 4308 dbSNP
rs763427249 4309 dbSNP
rs889816686 4312 dbSNP
rs773746291 4315 dbSNP
rs1337928107 4316 dbSNP
rs1382636552 4318 dbSNP
rs535183914 4325 dbSNP
rs896513110 4326 dbSNP
rs1327832240 4327 dbSNP
rs1163941887 4328 dbSNP
rs753312449 4332 dbSNP
rs1052455798 4346 dbSNP
rs1277088148 4350 dbSNP
rs1315510359 4351 dbSNP
rs1205531798 4352 dbSNP
rs574145928 4363 dbSNP
rs1426520936 4367 dbSNP
rs935302231 4372 dbSNP
rs1028514917 4380 dbSNP
rs1186822902 4383 dbSNP
rs925391189 4384 dbSNP
rs1429398287 4385 dbSNP
rs1192717253 4389 dbSNP
rs1421626140 4395 dbSNP
rs1481476783 4402 dbSNP
rs1177177312 4407 dbSNP
rs1044193730 4423 dbSNP
rs1001103158 4424 dbSNP
rs904128953 4432 dbSNP
rs1291064674 4434 dbSNP
rs1042928872 4442 dbSNP
rs1262436174 4444 dbSNP
rs147077226 4446 dbSNP
rs1487605047 4448 dbSNP
rs1297170556 4455 dbSNP
rs1268674407 4461 dbSNP
rs1224845569 4467 dbSNP
rs896190273 4470 dbSNP
rs922086463 4472 dbSNP
rs114094350 4482 dbSNP
rs937659395 4486 dbSNP
rs926300189 4494 dbSNP
rs1215572369 4505 dbSNP
rs1273100529 4507 dbSNP
rs776445643 4510 dbSNP
rs189108276 4511 dbSNP
rs1200232934 4512 dbSNP
rs552473151 4515 dbSNP
rs1384753175 4520 dbSNP
rs1161891617 4527 dbSNP
rs768366190 4530 dbSNP
rs930518353 4532 dbSNP
rs1296687514 4538 dbSNP
rs1344447486 4546 dbSNP
rs1026769033 4552 dbSNP
rs919198939 4553 dbSNP
rs533840739 4558 dbSNP
rs1303303060 4560 dbSNP
rs1366259645 4560 dbSNP
rs995661350 4564 dbSNP
rs965911832 4574 dbSNP
rs184183472 4575 dbSNP
rs1023458809 4581 dbSNP
rs746503021 4582 dbSNP
rs1167268680 4585 dbSNP
rs1223480617 4587 dbSNP
rs986884273 4590 dbSNP
rs4859536 4591 dbSNP
rs77002343 4593 dbSNP
rs1251899537 4596 dbSNP
rs1052740064 4605 dbSNP
rs1418946127 4614 dbSNP
rs1157237252 4616 dbSNP
rs1172582208 4623 dbSNP
rs1431709984 4632 dbSNP
rs1268429123 4636 dbSNP
rs1200682244 4645 dbSNP
rs191187309 4660 dbSNP
rs1000842030 4662 dbSNP
rs1249990554 4667 dbSNP
rs1299325762 4671 dbSNP
rs904065271 4675 dbSNP
rs375764535 4682 dbSNP
rs1306877981 4686 dbSNP
rs1481225296 4689 dbSNP
rs372485332 4691 dbSNP
rs551078948 4712 dbSNP
rs1230412822 4714 dbSNP
rs1289475838 4715 dbSNP
rs532783626 4722 dbSNP
rs1206733197 4724 dbSNP
rs896691755 4725 dbSNP
rs1457763912 4728 dbSNP
rs565337277 4735 dbSNP
rs1177300780 4744 dbSNP
rs1245397280 4760 dbSNP
rs932047279 4760 dbSNP
rs1056597939 4765 dbSNP
rs1181589546 4775 dbSNP
rs921993061 4779 dbSNP
rs540963999 4793 dbSNP
rs1171981180 4794 dbSNP
rs1354595508 4805 dbSNP
rs1465081400 4807 dbSNP
rs904956312 4807 dbSNP
rs1408160231 4808 dbSNP
rs944837476 4816 dbSNP
rs908142044 4818 dbSNP
rs573420486 4825 dbSNP
rs1216547107 4830 dbSNP
rs1296460779 4831 dbSNP
rs1317339402 4837 dbSNP
rs1196780927 4838 dbSNP
rs984100772 4854 dbSNP
rs919132243 4858 dbSNP
rs1398515935 4859 dbSNP
rs1236078159 4865 dbSNP
rs1471637845 4872 dbSNP
rs1300028080 4879 dbSNP
rs560095578 4887 dbSNP
rs1468293398 4888 dbSNP
rs1428600408 4890 dbSNP
rs1187879279 4895 dbSNP
rs7684530 4897 dbSNP
rs1481511100 4928 dbSNP
rs574207597 4929 dbSNP
rs1167862803 4942 dbSNP
rs919566819 4943 dbSNP
rs944534232 4944 dbSNP
rs1410251201 4952 dbSNP
rs1470195136 4961 dbSNP
rs1333343451 4966 dbSNP
rs1181502168 4973 dbSNP
rs1420260458 4989 dbSNP
rs973876957 4993 dbSNP
rs1289699630 5004 dbSNP
rs771891411 5009 dbSNP
rs1198300575 5012 dbSNP
rs1340062887 5020 dbSNP
rs1216889594 5031 dbSNP
rs745830912 5036 dbSNP
rs1023363918 5052 dbSNP
rs1285196316 5052 dbSNP
rs1219140007 5053 dbSNP
rs11725902 5063 dbSNP
rs1277006439 5074 dbSNP
rs1449065651 5076 dbSNP
rs1263487305 5081 dbSNP
rs1487727091 5087 dbSNP
rs765700548 5096 dbSNP
rs555872736 5112 dbSNP
rs1263156618 5116 dbSNP
rs1478349440 5118 dbSNP
rs563924976 5129 dbSNP
rs1422924711 5130 dbSNP
rs921353429 5131 dbSNP
rs1030960114 5144 dbSNP
rs543882072 5148 dbSNP
rs968110022 5149 dbSNP
rs577014484 5166 dbSNP
rs1278788096 5168 dbSNP
rs1239486513 5191 dbSNP
rs566769467 5192 dbSNP
rs1310488769 5195 dbSNP
rs1436440609 5199 dbSNP
rs35253506 5215 dbSNP
rs999833238 5219 dbSNP
rs1353411717 5228 dbSNP
rs1224703895 5240 dbSNP
rs1021623300 5241 dbSNP
rs186804789 5244 dbSNP
rs1213989376 5250 dbSNP
rs961146581 5252 dbSNP
rs1405463065 5253 dbSNP
rs1451647431 5256 dbSNP
rs534101901 5256 dbSNP
rs1471103754 5264 dbSNP
rs1244922257 5265 dbSNP
rs996110702 5272 dbSNP
rs900597332 5273 dbSNP
rs1158414225 5280 dbSNP
rs1179093448 5284 dbSNP
rs1379434483 5293 dbSNP
rs1418150056 5300 dbSNP
rs1165669758 5304 dbSNP
rs1470716344 5315 dbSNP
rs1404865687 5327 dbSNP
rs1321610598 5328 dbSNP
rs566627478 5329 dbSNP
rs1448166830 5330 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000429927.2 | 3UTR | UCAAGACAUAUCCAGUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
82 hsa-miR-6509-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055374 PDCD4 programmed cell death 4 2 4
MIRT378341 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT444668 CDKL2 cyclin dependent kinase like 2 2 2
MIRT446953 CD248 CD248 molecule 2 2
MIRT460332 CAMK4 calcium/calmodulin dependent protein kinase IV 2 6
MIRT464078 VPS4A vacuolar protein sorting 4 homolog A 2 2
MIRT464586 UBN2 ubinuclein 2 2 2
MIRT468482 SESN3 sestrin 3 2 2
MIRT468962 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT475455 HSPA8 heat shock protein family A (Hsp70) member 8 2 2
MIRT482403 ADRB1 adrenoceptor beta 1 2 10
MIRT486992 ZFAND2B zinc finger AN1-type containing 2B 2 2
MIRT489397 TUBB2A tubulin beta 2A class IIa 2 2
MIRT526319 UGT2A1 UDP glucuronosyltransferase family 2 member A1 complex locus 2 2
MIRT526560 UGT2A2 UDP glucuronosyltransferase family 2 member A2 2 2
MIRT526732 ZNF138 zinc finger protein 138 2 8
MIRT531581 STXBP5L syntaxin binding protein 5 like 2 2
MIRT532011 NOX5 NADPH oxidase 5 2 2
MIRT533407 TXLNG taxilin gamma 2 2
MIRT533436 TRPC5 transient receptor potential cation channel subfamily C member 5 2 2
MIRT533866 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT539254 ANKRD50 ankyrin repeat domain 50 2 2
MIRT541451 C15orf48 chromosome 15 open reading frame 48 2 2
MIRT566794 MIER3 MIER family member 3 2 2
MIRT569294 SURF6 surfeit 6 2 2
MIRT571336 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT572802 PPP3CB protein phosphatase 3 catalytic subunit beta 2 2
MIRT572813 MYO1C myosin IC 2 2
MIRT574219 DMRT2 doublesex and mab-3 related transcription factor 2 2 2
MIRT607259 GRAMD1B GRAM domain containing 1B 2 4
MIRT609307 CHD4 chromodomain helicase DNA binding protein 4 2 2
MIRT615459 REPS1 RALBP1 associated Eps domain containing 1 2 2
MIRT616861 RPLP1 ribosomal protein lateral stalk subunit P1 2 2
MIRT619415 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT619652 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT625325 TNFRSF13B TNF receptor superfamily member 13B 2 2
MIRT638980 ARFIP2 ADP ribosylation factor interacting protein 2 2 2
MIRT639458 ZNF429 zinc finger protein 429 2 2
MIRT640550 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT641473 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT642720 ATXN3 ataxin 3 2 2
MIRT643048 SMN1 survival of motor neuron 1, telomeric 2 2
MIRT644921 SMN2 survival of motor neuron 2, centromeric 2 2
MIRT645875 ZNF275 zinc finger protein 275 2 2
MIRT649824 LIPG lipase G, endothelial type 2 2
MIRT649851 GYS2 glycogen synthase 2 2 2
MIRT649972 TRAFD1 TRAF-type zinc finger domain containing 1 2 2
MIRT650675 ZNF259 ZPR1 zinc finger 1 1
MIRT651319 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT652876 TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 2 2
MIRT652881 SYVN1 synoviolin 1 2 2
MIRT654144 RPAP2 RNA polymerase II associated protein 2 2 2
MIRT657080 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT657181 INO80C INO80 complex subunit C 2 2
MIRT657830 GJD3 gap junction protein delta 3 2 2
MIRT657897 GDF7 growth differentiation factor 7 2 2
MIRT659631 CDKN2AIP CDKN2A interacting protein 2 2
MIRT663115 SPTA1 spectrin alpha, erythrocytic 1 2 2
MIRT664739 METTL16 methyltransferase like 16 2 2
MIRT667551 LRAT lecithin retinol acyltransferase 2 2
MIRT668552 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT682893 XIAP X-linked inhibitor of apoptosis 2 2
MIRT683092 PRRG4 proline rich and Gla domain 4 2 2
MIRT683102 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT697648 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT709158 ZNF419 zinc finger protein 419 2 2
MIRT713220 RCAN2 regulator of calcineurin 2 2 2
MIRT713277 LAIR1 leukocyte associated immunoglobulin like receptor 1 2 2
MIRT715008 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT715051 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT715696 PNMAL2 paraneoplastic Ma antigen family member 8B 2 2
MIRT717250 TMEM246 transmembrane protein 246 2 2
MIRT717322 PGK1 phosphoglycerate kinase 1 2 2
MIRT717587 MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like 2 2
MIRT718122 CHST4 carbohydrate sulfotransferase 4 2 2
MIRT718418 CALN1 calneuron 1 2 2
MIRT718750 ZNF490 zinc finger protein 490 2 2
MIRT720048 PPP1R3F protein phosphatase 1 regulatory subunit 3F 2 2
MIRT721497 THRB thyroid hormone receptor beta 2 2
MIRT722531 EPRS glutamyl-prolyl-tRNA synthetase 2 2
MIRT723279 KRTAP21-2 keratin associated protein 21-2 2 2
MIRT724813 MSX2 msh homeobox 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6509-3p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-6509-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6509-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-6509-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-6509-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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