pre-miRNA Information
pre-miRNA hsa-mir-4282   
Genomic Coordinates chr6: 72967687 - 72967753
Description Homo sapiens miR-4282 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4282
Sequence 40| UAAAAUUUGCAUCCAGGA |57
Evidence Experimental
Experiments SOLiD
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN32074657 13 COSMIC
COSN6331413 18 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1195771339 5 dbSNP
rs755058572 6 dbSNP
rs1245753664 11 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CMSS1   
Synonyms C3orf26
Description cms1 ribosomal small subunit homolog (yeast)
Transcript NM_001167924   
Other Transcripts NM_032359   
Expression
Putative miRNA Targets on CMSS1
3'UTR of CMSS1
(miRNA target sites are highlighted)
>CMSS1|NM_001167924|3'UTR
   1 GTCTGTGTCCTAATGAAGATTCCAGTTTTCACAGTAGAAGTTGCATCTTATTTAATGACTCTGATACATTGCAAGCACTC
  81 AGTAAATATCAGCAAATAGTTTATGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAATGA
 161 AACTGTCCTTTTGACAACTCTCTTATATAATAAAGTATCACCGGCTTGTGTATGATCCTTGTTGAGCGGACCGTGTTTTT
 241 CTGT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agGACCU---ACGUUUAAAAu 5'
            |||||   || ::||| | 
Target 5' caCTGGAATGTGGGGATTCTg 3'
128 - 148 96.00 -8.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM4613614 3 COSMIC
COSN30136413 7 COSMIC
COSN31512553 19 COSMIC
COSN30490718 23 COSMIC
COSN31561038 140 COSMIC
COSN16130134 160 COSMIC
COSN7720521 178 COSMIC
COSN31591886 203 COSMIC
COSN396249 351 COSMIC
COSN24985974 420 COSMIC
COSN20760404 476 COSMIC
COSN1284040 592 COSMIC
COSN24038083 1299 COSMIC
COSN21570731 1440 COSMIC
COSN21784988 1872 COSMIC
COSN15126666 2178 COSMIC
COSN9897193 2798 COSMIC
COSN19448266 2864 COSMIC
COSN1975846 2913 COSMIC
COSN25643453 3000 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs202027002 3 dbSNP
rs376887574 7 dbSNP
rs768638500 8 dbSNP
rs770432550 19 dbSNP
rs778636554 20 dbSNP
rs1450065875 21 dbSNP
rs1221195831 24 dbSNP
rs770536552 27 dbSNP
rs1481665629 28 dbSNP
rs1177259770 33 dbSNP
rs985565239 36 dbSNP
rs747883697 37 dbSNP
rs374802960 40 dbSNP
rs370189071 45 dbSNP
rs1165847609 52 dbSNP
rs901040039 63 dbSNP
rs1257358489 73 dbSNP
rs918835159 103 dbSNP
rs1329754508 108 dbSNP
rs774703654 110 dbSNP
rs1388244876 117 dbSNP
rs774976210 136 dbSNP
rs760100501 137 dbSNP
rs1243077878 143 dbSNP
rs1448477015 149 dbSNP
rs1469158155 166 dbSNP
rs1363909146 183 dbSNP
rs1183479609 184 dbSNP
rs1449533290 190 dbSNP
rs1265631063 196 dbSNP
rs192626161 203 dbSNP
rs775862021 204 dbSNP
rs1010712822 209 dbSNP
rs367705222 213 dbSNP
rs1227129873 215 dbSNP
rs904756526 223 dbSNP
rs1001822396 228 dbSNP
rs764271933 229 dbSNP
rs1329565924 233 dbSNP
rs754128670 234 dbSNP
rs1441338937 249 dbSNP
rs939017150 251 dbSNP
rs1400071398 252 dbSNP
rs1326776190 254 dbSNP
rs532001099 256 dbSNP
rs1384984561 268 dbSNP
rs59763622 272 dbSNP
rs116437192 273 dbSNP
rs1350339274 289 dbSNP
rs1235024987 312 dbSNP
rs558256817 313 dbSNP
rs1343429772 318 dbSNP
rs188544078 320 dbSNP
rs879177839 327 dbSNP
rs1207331353 333 dbSNP
rs1446943093 336 dbSNP
rs543064852 339 dbSNP
rs1022117714 348 dbSNP
rs1343023363 363 dbSNP
rs888980261 366 dbSNP
rs372744339 368 dbSNP
rs1235340513 390 dbSNP
rs1018388315 391 dbSNP
rs1429863280 393 dbSNP
rs975388363 394 dbSNP
rs1193665990 398 dbSNP
rs977163344 404 dbSNP
rs1374358587 407 dbSNP
rs1173827086 415 dbSNP
rs1436223385 418 dbSNP
rs922527084 419 dbSNP
rs933794167 422 dbSNP
rs1025684693 429 dbSNP
rs1052234028 430 dbSNP
rs913297419 447 dbSNP
rs1243179776 450 dbSNP
rs1196010287 453 dbSNP
rs1484709433 458 dbSNP
rs1464140126 459 dbSNP
rs946176688 464 dbSNP
rs1043438851 471 dbSNP
rs904556835 479 dbSNP
rs951701692 481 dbSNP
rs1213762154 485 dbSNP
rs1002191282 490 dbSNP
rs1056011093 491 dbSNP
rs896078175 492 dbSNP
rs879437063 493 dbSNP
rs754978186 500 dbSNP
rs1456456060 502 dbSNP
rs1025834804 506 dbSNP
rs200427220 512 dbSNP
rs1373417630 518 dbSNP
rs540688474 521 dbSNP
rs951091067 529 dbSNP
rs1300905067 533 dbSNP
rs1409720675 535 dbSNP
rs1420710240 540 dbSNP
rs1005329447 545 dbSNP
rs115896580 546 dbSNP
rs939149556 552 dbSNP
rs963783327 557 dbSNP
rs975494046 560 dbSNP
rs922497414 561 dbSNP
rs955312366 569 dbSNP
rs1329088578 571 dbSNP
rs1204135718 572 dbSNP
rs987916626 599 dbSNP
rs1207177358 605 dbSNP
rs1226479488 608 dbSNP
rs781088421 610 dbSNP
rs946117135 619 dbSNP
rs1469232341 620 dbSNP
rs1416075109 623 dbSNP
rs200747161 624 dbSNP
rs542115251 625 dbSNP
rs1355422082 626 dbSNP
rs1043676736 627 dbSNP
rs888926308 632 dbSNP
rs1417762261 640 dbSNP
rs1166355379 646 dbSNP
rs771567716 647 dbSNP
rs192833687 672 dbSNP
rs530958353 673 dbSNP
rs1176780406 674 dbSNP
rs1156624135 678 dbSNP
rs1481087883 679 dbSNP
rs1234328478 680 dbSNP
rs1211584481 681 dbSNP
rs1467912434 682 dbSNP
rs1273712237 698 dbSNP
rs1235095278 701 dbSNP
rs1314565065 706 dbSNP
rs1055816858 710 dbSNP
rs1305688411 713 dbSNP
rs1223933864 714 dbSNP
rs1396379960 720 dbSNP
rs1461800577 727 dbSNP
rs896046896 736 dbSNP
rs546204946 740 dbSNP
rs950301394 742 dbSNP
rs901244087 762 dbSNP
rs1463491202 773 dbSNP
rs1343446606 776 dbSNP
rs1047246216 777 dbSNP
rs371117627 780 dbSNP
rs374663180 784 dbSNP
rs112221178 791 dbSNP
rs1410420984 800 dbSNP
rs151012855 807 dbSNP
rs1453533510 809 dbSNP
rs951428594 810 dbSNP
rs1215423645 812 dbSNP
rs534200404 815 dbSNP
rs1005736226 823 dbSNP
rs899595492 830 dbSNP
rs547071128 831 dbSNP
rs559430470 832 dbSNP
rs1227074713 833 dbSNP
rs116127648 837 dbSNP
rs1233144387 841 dbSNP
rs1029309953 844 dbSNP
rs969495657 845 dbSNP
rs980898964 846 dbSNP
rs955279468 847 dbSNP
rs988052480 850 dbSNP
rs1360484234 858 dbSNP
rs1020742939 861 dbSNP
rs1288855308 864 dbSNP
rs1335905886 869 dbSNP
rs1347076942 878 dbSNP
rs529456975 890 dbSNP
rs1264439276 896 dbSNP
rs551306909 913 dbSNP
rs1395385573 927 dbSNP
rs1196990333 929 dbSNP
rs1426582601 931 dbSNP
rs987937158 932 dbSNP
rs979682563 933 dbSNP
rs569425708 940 dbSNP
rs1277599810 958 dbSNP
rs548808052 962 dbSNP
rs1179885015 964 dbSNP
rs1348156931 967 dbSNP
rs937441091 968 dbSNP
rs184785169 976 dbSNP
rs917282284 977 dbSNP
rs773916152 997 dbSNP
rs1342388970 998 dbSNP
rs199557635 1007 dbSNP
rs1414317725 1008 dbSNP
rs746319011 1008 dbSNP
rs1463745101 1012 dbSNP
rs1175819687 1021 dbSNP
rs766086425 1039 dbSNP
rs1369997130 1040 dbSNP
rs1408151410 1051 dbSNP
rs1170997665 1066 dbSNP
rs1430248397 1073 dbSNP
rs887358280 1085 dbSNP
rs1315335876 1093 dbSNP
rs1356676502 1096 dbSNP
rs776017639 1107 dbSNP
rs901706845 1115 dbSNP
rs1311066294 1129 dbSNP
rs1186596883 1135 dbSNP
rs1485746016 1140 dbSNP
rs1319498541 1144 dbSNP
rs1228991788 1148 dbSNP
rs1229130195 1149 dbSNP
rs558142350 1157 dbSNP
rs570083846 1159 dbSNP
rs941511214 1177 dbSNP
rs1337808678 1178 dbSNP
rs1251121002 1179 dbSNP
rs761025583 1185 dbSNP
rs1320618510 1198 dbSNP
rs1292043597 1203 dbSNP
rs112417063 1210 dbSNP
rs1202480119 1213 dbSNP
rs1356221935 1213 dbSNP
rs71625274 1214 dbSNP
rs78582416 1214 dbSNP
rs776186483 1215 dbSNP
rs887069194 1218 dbSNP
rs62285481 1220 dbSNP
rs552753544 1223 dbSNP
rs574614382 1225 dbSNP
rs890832500 1228 dbSNP
rs1009190946 1229 dbSNP
rs969610973 1235 dbSNP
rs1020793594 1241 dbSNP
rs1419429441 1248 dbSNP
rs112059405 1252 dbSNP
rs1250878700 1256 dbSNP
rs1196733685 1264 dbSNP
rs960918397 1265 dbSNP
rs1271794450 1269 dbSNP
rs1213657088 1271 dbSNP
rs1389847207 1284 dbSNP
rs979265117 1298 dbSNP
rs1237067909 1302 dbSNP
rs1033954038 1306 dbSNP
rs988272337 1314 dbSNP
rs1308044951 1316 dbSNP
rs958803026 1319 dbSNP
rs1392071250 1322 dbSNP
rs1325092369 1339 dbSNP
rs1427836688 1345 dbSNP
rs1392179048 1349 dbSNP
rs189343347 1350 dbSNP
rs1175606710 1352 dbSNP
rs1376554671 1353 dbSNP
rs1020703265 1354 dbSNP
rs180929225 1359 dbSNP
rs917250090 1371 dbSNP
rs1441889525 1378 dbSNP
rs949990455 1387 dbSNP
rs765751724 1388 dbSNP
rs908770839 1390 dbSNP
rs941634068 1398 dbSNP
rs1038525991 1400 dbSNP
rs1469305216 1402 dbSNP
rs1292722798 1408 dbSNP
rs910257611 1409 dbSNP
rs943255888 1414 dbSNP
rs976040379 1416 dbSNP
rs1242625350 1421 dbSNP
rs923076611 1428 dbSNP
rs921467181 1429 dbSNP
rs1302419931 1432 dbSNP
rs1441453007 1433 dbSNP
rs1316195004 1438 dbSNP
rs1332748110 1438 dbSNP
rs1225460644 1442 dbSNP
rs1399586931 1445 dbSNP
rs546092746 1446 dbSNP
rs564478429 1449 dbSNP
rs753249188 1452 dbSNP
rs1281878330 1455 dbSNP
rs573236717 1459 dbSNP
rs1193392374 1465 dbSNP
rs1478592991 1467 dbSNP
rs1047556895 1470 dbSNP
rs540763621 1477 dbSNP
rs1050763327 1481 dbSNP
rs776777156 1483 dbSNP
rs762102900 1484 dbSNP
rs1218997298 1489 dbSNP
rs1009158106 1492 dbSNP
rs1038314813 1493 dbSNP
rs1234723462 1513 dbSNP
rs1042464310 1516 dbSNP
rs903750954 1519 dbSNP
rs376050013 1524 dbSNP
rs1002382102 1527 dbSNP
rs1001219021 1547 dbSNP
rs1412451979 1556 dbSNP
rs1374459677 1562 dbSNP
rs1247574519 1574 dbSNP
rs562040776 1577 dbSNP
rs1035296149 1587 dbSNP
rs1033508629 1592 dbSNP
rs896605760 1595 dbSNP
rs529516936 1598 dbSNP
rs550877444 1599 dbSNP
rs142266930 1602 dbSNP
rs979206822 1609 dbSNP
rs971491313 1614 dbSNP
rs1017254042 1615 dbSNP
rs982764429 1620 dbSNP
rs1213856892 1622 dbSNP
rs1339985121 1623 dbSNP
rs1280078601 1628 dbSNP
rs533465411 1630 dbSNP
rs1454575599 1631 dbSNP
rs1354312121 1632 dbSNP
rs1313065286 1642 dbSNP
rs1449803322 1646 dbSNP
rs964395342 1647 dbSNP
rs376524409 1651 dbSNP
rs7619080 1655 dbSNP
rs1432419897 1672 dbSNP
rs974770105 1676 dbSNP
rs1173505187 1683 dbSNP
rs1474244881 1687 dbSNP
rs921531017 1694 dbSNP
rs751685337 1717 dbSNP
rs1473903063 1718 dbSNP
rs1231463746 1723 dbSNP
rs1367694260 1731 dbSNP
rs932788130 1735 dbSNP
rs1051217271 1743 dbSNP
rs1259874318 1744 dbSNP
rs929248876 1753 dbSNP
rs912287799 1754 dbSNP
rs1229610428 1759 dbSNP
rs983302826 1759 dbSNP
rs1278640367 1760 dbSNP
rs34029169 1760 dbSNP
rs397805623 1760 dbSNP
rs941435467 1761 dbSNP
rs1333900333 1764 dbSNP
rs1460353414 1775 dbSNP
rs945151969 1783 dbSNP
rs752746416 1784 dbSNP
rs570121846 1786 dbSNP
rs534307770 1788 dbSNP
rs111952804 1790 dbSNP
rs1406029994 1793 dbSNP
rs1176877380 1801 dbSNP
rs1440030117 1803 dbSNP
rs1267285982 1811 dbSNP
rs1191605768 1813 dbSNP
rs1467980199 1815 dbSNP
rs905178586 1816 dbSNP
rs1223099637 1819 dbSNP
rs938015763 1820 dbSNP
rs1057082882 1838 dbSNP
rs183915802 1852 dbSNP
rs903548656 1854 dbSNP
rs1240453640 1857 dbSNP
rs1215752080 1859 dbSNP
rs1311927922 1862 dbSNP
rs1439250994 1877 dbSNP
rs1000785006 1883 dbSNP
rs1294676053 1887 dbSNP
rs1055411179 1888 dbSNP
rs755955286 1890 dbSNP
rs1013403437 1917 dbSNP
rs1189555895 1918 dbSNP
rs1420552062 1926 dbSNP
rs1410708125 1927 dbSNP
rs1381864271 1935 dbSNP
rs1024838480 1936 dbSNP
rs1267936090 1948 dbSNP
rs1192883693 1960 dbSNP
rs1484580938 1967 dbSNP
rs568048463 1968 dbSNP
rs1216803232 1973 dbSNP
rs1158822148 1976 dbSNP
rs1277826555 1984 dbSNP
rs1232518378 1999 dbSNP
rs1010272067 2003 dbSNP
rs971460316 2009 dbSNP
rs757384515 2017 dbSNP
rs1015593604 2019 dbSNP
rs962995279 2043 dbSNP
rs1359881287 2046 dbSNP
rs535500874 2048 dbSNP
rs1297661545 2051 dbSNP
rs1350126119 2084 dbSNP
rs556898702 2085 dbSNP
rs1291319014 2090 dbSNP
rs921488226 2100 dbSNP
rs1378013574 2114 dbSNP
rs1178073424 2118 dbSNP
rs756965247 2137 dbSNP
rs986910597 2144 dbSNP
rs912759184 2146 dbSNP
rs1375382463 2148 dbSNP
rs945120723 2150 dbSNP
rs1418802094 2155 dbSNP
rs575463817 2156 dbSNP
rs1193743199 2158 dbSNP
rs539756044 2159 dbSNP
rs1254916660 2164 dbSNP
rs1209745019 2183 dbSNP
rs1483099793 2184 dbSNP
rs1256964200 2193 dbSNP
rs1352632712 2204 dbSNP
rs1306265138 2208 dbSNP
rs978282022 2209 dbSNP
rs1017370509 2213 dbSNP
rs925056785 2217 dbSNP
rs1342486131 2224 dbSNP
rs1311242026 2228 dbSNP
rs936298820 2238 dbSNP
rs964342085 2240 dbSNP
rs781449025 2244 dbSNP
rs1287688688 2247 dbSNP
rs1460329806 2247 dbSNP
rs778235993 2248 dbSNP
rs1171342607 2249 dbSNP
rs997184845 2250 dbSNP
rs1221845476 2252 dbSNP
rs1424032093 2256 dbSNP
rs1326808969 2258 dbSNP
rs1202530098 2259 dbSNP
rs1479891109 2261 dbSNP
rs745360136 2270 dbSNP
rs1234969928 2274 dbSNP
rs1290783650 2291 dbSNP
rs1199850412 2293 dbSNP
rs147819028 2294 dbSNP
rs1291519845 2298 dbSNP
rs1244243296 2300 dbSNP
rs1341284228 2309 dbSNP
rs1219408964 2313 dbSNP
rs1389435165 2315 dbSNP
rs1375913857 2324 dbSNP
rs573324335 2325 dbSNP
rs1331893306 2331 dbSNP
rs1234694617 2333 dbSNP
rs1467130209 2337 dbSNP
rs1391563830 2340 dbSNP
rs1030451108 2341 dbSNP
rs950646430 2345 dbSNP
rs1369816615 2346 dbSNP
rs949311997 2348 dbSNP
rs1046257322 2354 dbSNP
rs886312232 2357 dbSNP
rs1004722220 2363 dbSNP
rs141295559 2364 dbSNP
rs1209298751 2368 dbSNP
rs1476360473 2369 dbSNP
rs898595356 2369 dbSNP
rs1267409862 2382 dbSNP
rs1237180579 2388 dbSNP
rs1375795690 2399 dbSNP
rs1164204446 2403 dbSNP
rs1414021100 2404 dbSNP
rs1404421662 2409 dbSNP
rs1448803046 2416 dbSNP
rs995888567 2417 dbSNP
rs1322867573 2419 dbSNP
rs562242333 2420 dbSNP
rs1028303664 2422 dbSNP
rs574063803 2423 dbSNP
rs147007132 2436 dbSNP
rs762686807 2436 dbSNP
rs987046896 2439 dbSNP
rs1380597827 2443 dbSNP
rs1416318670 2445 dbSNP
rs1441978547 2446 dbSNP
rs1019735637 2453 dbSNP
rs1251640810 2453 dbSNP
rs868671365 2462 dbSNP
rs1269579550 2467 dbSNP
rs1226797409 2468 dbSNP
rs967239203 2474 dbSNP
rs1287085911 2488 dbSNP
rs771637290 2503 dbSNP
rs978289786 2504 dbSNP
rs1242023441 2505 dbSNP
rs1345518832 2512 dbSNP
rs1029591058 2525 dbSNP
rs954652589 2528 dbSNP
rs544662791 2531 dbSNP
rs35228533 2532 dbSNP
rs1233896712 2540 dbSNP
rs1342949748 2545 dbSNP
rs1332253092 2547 dbSNP
rs1315605321 2550 dbSNP
rs1398911510 2553 dbSNP
rs1360738323 2555 dbSNP
rs924994701 2558 dbSNP
rs1042681260 2576 dbSNP
rs936459755 2579 dbSNP
rs1423540597 2595 dbSNP
rs903986173 2601 dbSNP
rs1486958598 2610 dbSNP
rs1478647796 2619 dbSNP
rs1379952380 2621 dbSNP
rs1188621520 2628 dbSNP
rs1191584042 2634 dbSNP
rs1488032978 2636 dbSNP
rs990880341 2642 dbSNP
rs916285382 2646 dbSNP
rs1001043997 2647 dbSNP
rs949283244 2649 dbSNP
rs1484534104 2652 dbSNP
rs1277659878 2658 dbSNP
rs1237243531 2660 dbSNP
rs1347016192 2661 dbSNP
rs1268391851 2662 dbSNP
rs1217449161 2663 dbSNP
rs1340625955 2665 dbSNP
rs1279639891 2666 dbSNP
rs1412557237 2672 dbSNP
rs1039253830 2676 dbSNP
rs1333921170 2680 dbSNP
rs780525948 2690 dbSNP
rs1404957690 2697 dbSNP
rs189376913 2700 dbSNP
rs1424443586 2702 dbSNP
rs1029985678 2705 dbSNP
rs1471929770 2709 dbSNP
rs1237175077 2715 dbSNP
rs1210529505 2721 dbSNP
rs533309062 2722 dbSNP
rs551696137 2730 dbSNP
rs1317930906 2736 dbSNP
rs950447050 2738 dbSNP
rs1037560464 2743 dbSNP
rs1377974491 2745 dbSNP
rs1284477062 2753 dbSNP
rs898555725 2754 dbSNP
rs373355093 2755 dbSNP
rs979895352 2758 dbSNP
rs1334803416 2763 dbSNP
rs528117196 2776 dbSNP
rs114305328 2777 dbSNP
rs1403724250 2778 dbSNP
rs568021962 2780 dbSNP
rs1182691581 2787 dbSNP
rs1473626546 2788 dbSNP
rs535203377 2791 dbSNP
rs945373807 2792 dbSNP
rs553389295 2796 dbSNP
rs966997917 2801 dbSNP
rs1240013477 2804 dbSNP
rs1218719123 2808 dbSNP
rs1320637535 2810 dbSNP
rs1227708730 2812 dbSNP
rs978639884 2816 dbSNP
rs1290100775 2820 dbSNP
rs1229699914 2821 dbSNP
rs1042630687 2828 dbSNP
rs768944444 2835 dbSNP
rs550656839 2836 dbSNP
rs1446585053 2837 dbSNP
rs569115130 2840 dbSNP
rs1212874633 2842 dbSNP
rs1333996709 2851 dbSNP
rs958021250 2859 dbSNP
rs2316263 2865 dbSNP
rs1349389595 2866 dbSNP
rs916339064 2869 dbSNP
rs1201498339 2875 dbSNP
rs936946211 2876 dbSNP
rs1407303536 2880 dbSNP
rs1378774964 2883 dbSNP
rs1157816382 2897 dbSNP
rs1440138279 2898 dbSNP
rs1039202781 2900 dbSNP
rs970348382 2901 dbSNP
rs1246798910 2905 dbSNP
rs1487845834 2905 dbSNP
rs981787046 2906 dbSNP
rs900698224 2912 dbSNP
rs74476556 2913 dbSNP
rs940641106 2914 dbSNP
rs1051968032 2917 dbSNP
rs886066217 2919 dbSNP
rs1217988030 2920 dbSNP
rs1366912963 2922 dbSNP
rs1037925730 2924 dbSNP
rs1438778078 2934 dbSNP
rs150328727 2934 dbSNP
rs1358838389 2935 dbSNP
rs1297866851 2940 dbSNP
rs1004512403 2945 dbSNP
rs920473066 2946 dbSNP
rs1381965612 2948 dbSNP
rs1173796455 2950 dbSNP
rs1015914841 2959 dbSNP
rs931386270 2963 dbSNP
rs534055792 2965 dbSNP
rs1192406100 2974 dbSNP
rs1049758361 2976 dbSNP
rs889874261 2981 dbSNP
rs1261964681 2993 dbSNP
rs376413606 2995 dbSNP
rs563219605 2995 dbSNP
rs960164773 2998 dbSNP
rs1262866067 3003 dbSNP
rs1208552969 3006 dbSNP
rs1312114204 3010 dbSNP
rs1302650790 3014 dbSNP
rs555497066 3020 dbSNP
rs761895219 3021 dbSNP
rs1025490293 3024 dbSNP
rs182065601 3025 dbSNP
rs544387763 3029 dbSNP
rs1322340308 3032 dbSNP
rs1300849082 3055 dbSNP
rs999817541 3056 dbSNP
rs1032923056 3057 dbSNP
rs1295731194 3062 dbSNP
rs555836912 3063 dbSNP
rs1476524893 3081 dbSNP
rs1422304182 3084 dbSNP
rs137957421 3091 dbSNP
rs1234124537 3102 dbSNP
rs1274716667 3109 dbSNP
rs1478593643 3116 dbSNP
rs1012428569 3122 dbSNP
rs1253718887 3133 dbSNP
rs1343493771 3137 dbSNP
rs925298007 3155 dbSNP
rs186923088 3156 dbSNP
rs975006761 3157 dbSNP
rs761317056 3158 dbSNP
rs149035199 3159 dbSNP
rs933486870 3167 dbSNP
rs1219400730 3168 dbSNP
rs1051489208 3178 dbSNP
rs1310895872 3191 dbSNP
rs886180005 3194 dbSNP
rs940480592 3195 dbSNP
rs1037309034 3197 dbSNP
rs1463999679 3197 dbSNP
rs1207675592 3198 dbSNP
rs1170761999 3205 dbSNP
rs1466781087 3216 dbSNP
rs981756062 3218 dbSNP
rs1163678349 3233 dbSNP
rs1423552340 3236 dbSNP
rs1257321870 3242 dbSNP
rs1185893779 3251 dbSNP
rs907561953 3256 dbSNP
rs1001376159 3260 dbSNP
rs962262368 3261 dbSNP
rs1376959336 3263 dbSNP
rs895617643 3264 dbSNP
rs1244346403 3269 dbSNP
rs1477015340 3277 dbSNP
rs973382985 3280 dbSNP
rs1412402262 3284 dbSNP
rs1444371513 3285 dbSNP
rs1020158469 3286 dbSNP
rs920510859 3299 dbSNP
rs967178760 3313 dbSNP
rs931779511 3318 dbSNP
rs527999173 3328 dbSNP
rs1032315393 3331 dbSNP
rs911281495 3338 dbSNP
rs1458102302 3341 dbSNP
rs1386779846 3345 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000421999.2 | 3UTR | UCAAGCUUUUAUACUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000421999.2 | 3UTR | UCAAGCUUUUAUACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
280 hsa-miR-4282 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057628 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT060732 RPS3 ribosomal protein S3 2 2
MIRT063371 ETNK1 ethanolamine kinase 1 2 2
MIRT066257 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT070774 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT070871 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT078056 PCTP phosphatidylcholine transfer protein 2 2
MIRT078408 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT084059 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT093537 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096072 SFXN1 sideroflexin 1 2 2
MIRT098316 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT100493 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT102254 HBP1 HMG-box transcription factor 1 2 4
MIRT105318 VPS37A VPS37A, ESCRT-I subunit 2 2
MIRT114143 MZT1 mitotic spindle organizing protein 1 2 4
MIRT114873 DICER1 dicer 1, ribonuclease III 2 2
MIRT134683 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT137640 RCOR1 REST corepressor 1 2 2
MIRT155449 CCNT2 cyclin T2 2 4
MIRT165656 DCTN4 dynactin subunit 4 2 2
MIRT177570 CSTF2T cleavage stimulation factor subunit 2 tau variant 2 4
MIRT188514 E2F7 E2F transcription factor 7 2 10
MIRT193019 TMOD3 tropomodulin 3 2 4
MIRT195823 GADD45A growth arrest and DNA damage inducible alpha 2 2
MIRT195885 DEPDC1 DEP domain containing 1 2 6
MIRT206029 NUP50 nucleoporin 50 2 6
MIRT212148 CLCN3 chloride voltage-gated channel 3 2 2
MIRT213999 DCP2 decapping mRNA 2 2 2
MIRT214650 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT221568 CBX3 chromobox 3 2 2
MIRT224544 ZNF623 zinc finger protein 623 2 2
MIRT227654 SET SET nuclear proto-oncogene 2 2
MIRT229992 CHIC1 cysteine rich hydrophobic domain 1 2 2
MIRT238968 QKI QKI, KH domain containing RNA binding 2 2
MIRT239825 ACTB actin beta 2 2
MIRT241084 ZXDA zinc finger, X-linked, duplicated A 2 4
MIRT244852 ZBTB5 zinc finger and BTB domain containing 5 2 2
MIRT264534 TARDBP TAR DNA binding protein 2 2
MIRT271438 SKI SKI proto-oncogene 2 2
MIRT271597 ENAH ENAH, actin regulator 2 2
MIRT294332 ZNF264 zinc finger protein 264 2 2
MIRT296341 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT301715 TEF TEF, PAR bZIP transcription factor 2 2
MIRT308549 ZNF654 zinc finger protein 654 2 2
MIRT313866 DEPDC1B DEP domain containing 1B 2 2
MIRT315529 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT321066 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT343777 NUTF2 nuclear transport factor 2 2 2
MIRT359109 MAP1B microtubule associated protein 1B 2 2
MIRT397393 GOLGA3 golgin A3 2 4
MIRT400822 CPEB2 cytoplasmic polyadenylation element binding protein 2 2 2
MIRT442171 DSEL dermatan sulfate epimerase-like 2 2
MIRT442777 JAG1 jagged 1 2 2
MIRT442862 SCARF1 scavenger receptor class F member 1 2 4
MIRT442919 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT444567 TRA2B transformer 2 beta homolog 2 2
MIRT444718 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT445018 RBMS3 RNA binding motif single stranded interacting protein 3 2 2
MIRT445853 LRRC1 leucine rich repeat containing 1 2 2
MIRT446242 HELZ helicase with zinc finger 2 2
MIRT446542 GOLGA8B golgin A8 family member B 2 2
MIRT446643 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT446948 ZMAT3 zinc finger matrin-type 3 2 4
MIRT447061 KCNAB1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 2 2
MIRT447327 ZSCAN21 zinc finger and SCAN domain containing 21 2 2
MIRT447995 CDX1 caudal type homeobox 1 2 2
MIRT448543 RHEBP1 RHEB pseudogene 1 2 6
MIRT448752 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT448772 GOLGA8A golgin A8 family member A 2 2
MIRT449342 WDR26 WD repeat domain 26 2 2
MIRT450011 SLC16A6 solute carrier family 16 member 6 2 4
MIRT450229 PCNX pecanex homolog 1 2 2
MIRT450340 MRPL17 mitochondrial ribosomal protein L17 2 4
MIRT450381 MSI2 musashi RNA binding protein 2 2 2
MIRT450759 PGGT1B protein geranylgeranyltransferase type I subunit beta 2 2
MIRT450809 NRCAM neuronal cell adhesion molecule 2 2
MIRT450947 ATAD2 ATPase family, AAA domain containing 2 2 2
MIRT459095 CCPG1 cell cycle progression 1 2 2
MIRT462428 TWISTNB TWIST neighbor 2 2
MIRT465200 TROVE2 TROVE domain family member 2 2 4
MIRT467382 SON SON DNA binding protein 2 4
MIRT468546 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT471506 PDE4D phosphodiesterase 4D 2 2
MIRT471981 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT474478 KLHL11 kelch like family member 11 2 8
MIRT475011 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT480341 C5orf51 chromosome 5 open reading frame 51 2 2
MIRT482696 TEX9 testis expressed 9 2 6
MIRT483462 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 6
MIRT485623 FAM217B family with sequence similarity 217 member B 2 2
MIRT485714 CASP16 caspase 16, pseudogene 2 8
MIRT486279 SEC23A Sec23 homolog A, coat complex II component 2 2
MIRT491000 PEBP1 phosphatidylethanolamine binding protein 1 2 4
MIRT492594 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT493365 KIF5B kinesin family member 5B 2 2
MIRT494316 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT495208 EDN3 endothelin 3 2 2
MIRT497011 TCF15 transcription factor 15 2 2
MIRT498512 FRK fyn related Src family tyrosine kinase 2 2
MIRT498778 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT501045 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 6
MIRT502939 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504806 VHL von Hippel-Lindau tumor suppressor 2 6
MIRT505656 SHMT1 serine hydroxymethyltransferase 1 2 6
MIRT505964 RAB5C RAB5C, member RAS oncogene family 2 6
MIRT506322 OTUD4 OTU deubiquitinase 4 2 4
MIRT506803 KLHL15 kelch like family member 15 2 6
MIRT506917 KBTBD8 kelch repeat and BTB domain containing 8 2 4
MIRT507400 EMC7 ER membrane protein complex subunit 7 2 8
MIRT507471 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 6
MIRT508058 ATP13A3 ATPase 13A3 2 4
MIRT508135 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT509895 RPS23 ribosomal protein S23 2 4
MIRT510881 RAN RAN, member RAS oncogene family 2 8
MIRT513766 PEX5L peroxisomal biogenesis factor 5 like 2 4
MIRT516898 COPS8 COP9 signalosome subunit 8 2 2
MIRT518703 TIMD4 T-cell immunoglobulin and mucin domain containing 4 2 4
MIRT520429 TTPAL alpha tocopherol transfer protein like 2 6
MIRT521843 PNISR PNN interacting serine and arginine rich protein 2 4
MIRT522116 NUDT3 nudix hydrolase 3 2 4
MIRT525467 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT525583 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT525906 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 2 2
MIRT526072 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT526232 MTRNR2L5 MT-RNR2-like 5 2 4
MIRT526455 FAM71F2 family with sequence similarity 71 member F2 2 4
MIRT526515 POU5F1B POU class 5 homeobox 1B 2 2
MIRT528032 FEZ2 fasciculation and elongation protein zeta 2 2 2
MIRT528422 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT528995 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 4
MIRT529311 ATRNL1 attractin like 1 2 2
MIRT529376 SKP1 S-phase kinase associated protein 1 2 4
MIRT530015 SRRM1 serine and arginine repetitive matrix 1 2 2
MIRT530089 FMN2 formin 2 2 2
MIRT530942 ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 2 2
MIRT531229 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT533088 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT533299 USP46 ubiquitin specific peptidase 46 2 2
MIRT533318 UNKL unkempt family like zinc finger 2 2
MIRT533721 TMEM30A transmembrane protein 30A 2 2
MIRT534096 AZF1 azoospermia factor 1 2 2
MIRT534188 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534493 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT536077 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT536242 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT537524 FAM104A family with sequence similarity 104 member A 2 2
MIRT538088 DGKH diacylglycerol kinase eta 2 2
MIRT538475 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT538853 BTG1 BTG anti-proliferation factor 1 2 4
MIRT539075 GDNF glial cell derived neurotrophic factor 2 2
MIRT539480 ACVR2B activin A receptor type 2B 2 4
MIRT540210 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT541940 TSPAN2 tetraspanin 2 2 2
MIRT543812 COCH cochlin 2 2
MIRT545120 PDZRN4 PDZ domain containing ring finger 4 2 2
MIRT545571 GIMAP4 GTPase, IMAP family member 4 2 2
MIRT545989 XKR4 XK related 4 2 2
MIRT547213 PANK3 pantothenate kinase 3 2 4
MIRT547740 KIAA1468 KIAA1468 2 2
MIRT548022 GRB2 growth factor receptor bound protein 2 2 4
MIRT548032 GOLIM4 golgi integral membrane protein 4 2 2
MIRT548102 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 4
MIRT548217 FKBP1A FK506 binding protein 1A 2 2
MIRT548588 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT548953 CDC27 cell division cycle 27 2 2
MIRT549072 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT550368 INCENP inner centromere protein 2 6
MIRT550546 MYZAP myocardial zonula adherens protein 2 2
MIRT551491 TMEM192 transmembrane protein 192 2 4
MIRT553078 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT554104 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT555127 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT555477 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT555978 NPTN neuroplastin 2 2
MIRT557011 HPRT1 hypoxanthine phosphoribosyltransferase 1 2 2
MIRT557706 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT558333 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558488 DBN1 drebrin 1 2 2
MIRT559942 ZNF567 zinc finger protein 567 2 2
MIRT561127 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT561791 PAWR pro-apoptotic WT1 regulator 2 2
MIRT562438 EEF2 eukaryotic translation elongation factor 2 2 2
MIRT563102 PABPC4L poly(A) binding protein cytoplasmic 4 like 2 2
MIRT563212 ZNF813 zinc finger protein 813 2 2
MIRT563426 KIF3A kinesin family member 3A 2 2
MIRT563473 SPIN4 spindlin family member 4 2 2
MIRT564015 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT564117 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT564223 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT564503 CACNG1 calcium voltage-gated channel auxiliary subunit gamma 1 2 2
MIRT564515 DUSP3 dual specificity phosphatase 3 2 2
MIRT564811 ZBTB21 zinc finger and BTB domain containing 21 2 2
MIRT565265 TPD52 tumor protein D52 2 2
MIRT566012 RHOB ras homolog family member B 2 2
MIRT566216 PTMA prothymosin, alpha 2 2
MIRT566638 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT566821 MAPK8 mitogen-activated protein kinase 8 2 2
MIRT566948 LEPROT leptin receptor overlapping transcript 2 2
MIRT567290 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 2 2
MIRT567895 CSTF2 cleavage stimulation factor subunit 2 2 2
MIRT568731 MTRNR2L3 MT-RNR2-like 3 2 2
MIRT571263 ZNF239 zinc finger protein 239 2 2
MIRT572593 EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 2 2
MIRT573827 TGOLN2 trans-golgi network protein 2 2 2
MIRT576391 Fhl2 four and a half LIM domains 2 2 2
MIRT609901 SMS spermine synthase 2 2
MIRT613710 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 2
MIRT614406 ADAT1 adenosine deaminase, tRNA specific 1 2 2
MIRT615042 DCX doublecortin 2 2
MIRT617514 C5orf45 MRN complex interacting protein 2 2
MIRT619476 PRDM10 PR/SET domain 10 2 2
MIRT620349 TLN1 talin 1 2 2
MIRT620910 PLA2G7 phospholipase A2 group VII 2 2
MIRT622131 SP4 Sp4 transcription factor 2 2
MIRT622955 OTUD7B OTU deubiquitinase 7B 2 2
MIRT623351 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT623619 INTU inturned planar cell polarity protein 2 2
MIRT624409 CCDC171 coiled-coil domain containing 171 2 2
MIRT625171 CCS copper chaperone for superoxide dismutase 2 2
MIRT625685 RPP40 ribonuclease P/MRP subunit p40 2 2
MIRT625875 ALDH18A1 aldehyde dehydrogenase 18 family member A1 2 2
MIRT626002 FAM107A family with sequence similarity 107 member A 2 2
MIRT626872 HRH4 histamine receptor H4 2 4
MIRT628220 FKBP9 FK506 binding protein 9 2 2
MIRT628265 DIO2 iodothyronine deiodinase 2 2 2
MIRT628402 C8orf37 chromosome 8 open reading frame 37 2 2
MIRT630564 C3orf36 chromosome 3 open reading frame 36 2 4
MIRT631577 RASSF9 Ras association domain family member 9 2 2
MIRT635730 CCDC58 coiled-coil domain containing 58 2 2
MIRT636224 SLC8A1 solute carrier family 8 member A1 2 2
MIRT636613 CLIC5 chloride intracellular channel 5 2 2
MIRT638899 CDK9 cyclin dependent kinase 9 2 2
MIRT640167 ATXN7L1 ataxin 7 like 1 2 2
MIRT642070 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT643034 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 2 2
MIRT644572 SPOP speckle type BTB/POZ protein 2 2
MIRT644954 IFNB1 interferon beta 1 2 2
MIRT645948 TTF2 transcription termination factor 2 2 2
MIRT646440 XRCC2 X-ray repair cross complementing 2 2 2
MIRT647896 EPN2 epsin 2 2 2
MIRT648276 ZNF582 zinc finger protein 582 2 2
MIRT649381 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 2 2
MIRT650254 CD68 CD68 molecule 2 2
MIRT650333 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT651707 VMP1 vacuole membrane protein 1 2 2
MIRT651774 VASP vasodilator stimulated phosphoprotein 2 2
MIRT653144 SRPK2 SRSF protein kinase 2 2 2
MIRT654112 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT654161 RORB RAR related orphan receptor B 2 2
MIRT655716 MLF2 myeloid leukemia factor 2 2 2
MIRT657476 HDAC4 histone deacetylase 4 2 2
MIRT658095 FOXO1 forkhead box O1 2 2
MIRT658860 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT658988 DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 2 2
MIRT660767 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT661622 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT661694 TFDP2 transcription factor Dp-2 2 2
MIRT662208 PLA2G4E phospholipase A2 group IVE 2 2
MIRT662443 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT664422 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT687505 NECAB1 N-terminal EF-hand calcium binding protein 1 2 2
MIRT689910 SOD2 superoxide dismutase 2 2 2
MIRT690781 PLA2G2C phospholipase A2 group IIC 2 2
MIRT698488 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT699685 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT700926 PDS5A PDS5 cohesin associated factor A 2 2
MIRT702258 LMNB1 lamin B1 2 2
MIRT703166 GPR137C G protein-coupled receptor 137C 2 2
MIRT703242 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT704737 CENPQ centromere protein Q 2 2
MIRT707310 GLRX2 glutaredoxin 2 2 2
MIRT710021 KCNQ5 potassium voltage-gated channel subfamily Q member 5 2 2
MIRT712212 SCOC short coiled-coil protein 2 2
MIRT714742 SETBP1 SET binding protein 1 2 2
MIRT718268 ZNF749 zinc finger protein 749 2 2
MIRT720553 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT722248 RBM41 RNA binding motif protein 41 2 2
MIRT723767 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT723977 KIAA0146 scaffolding protein involved in DNA repair 1 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4282 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)

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