miRTarBase - #MIRT444755


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pre-miRNA Information
pre-miRNA hsa-mir-526b   
Genomic Coordinates chr19: 53694393 - 53694475
Description Homo sapiens miR-526b stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-526b-5p
Sequence 14| CUCUUGAGGGAAGCACUUUCUGU |36
Evidence Experimental
Experiments Array-cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs527640376 1 dbSNP
rs1397075062 2 dbSNP
rs1462454250 5 dbSNP
rs774071640 7 dbSNP
rs1329470722 12 dbSNP
rs1471427006 13 dbSNP
rs375077514 15 dbSNP
rs1280430663 16 dbSNP
rs370046048 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LUZP1   
Synonyms LUZP
Description leucine zipper protein 1
Transcript NM_001142546   
Other Transcripts NM_033631   
Expression
Putative miRNA Targets on LUZP1
3'UTR of LUZP1
(miRNA target sites are highlighted)		 
>LUZP1|NM_001142546|3'UTR
   1 GCCCGCTGGGTGTCTGTTGTCTGCCCTCTGCTCCTGCTTCTCAGCTCTTCCACCGTCCTGCCCCACGAAGGATCCAAGGC
  81 CAGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAACTGTGGTAGAGCCGGGCTGTGGCTCAGGTAATTTTTGCCATTT
 161 GGCCAGAGGGAATCAGAGACTACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCC
 241 TTGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATAAAGTCCCCAGCACACAGCAGGAGTC
 321 AAAAATTCTTCTCGGCTCCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGTTCTGGTTTC
 401 TCAGTCTCCTCACTATATCCACTTCACTCCTCATTTGCCCAATGGGCTCAAGTACCCCATAAGATTTACCAGCCATCAGC
 481 TCTATCTAGGGGGCTTTCATTTCTTTCCCCTTGGAGTTCTTTTCTTCAGACTTAAAGCAGAAAGGGGTCTGTGCTGCCTC
 561 TAAAGGATTATGAGACTACCCTTTAGGTTGAAGTTTGACCTGGCTCCTGGCTTACCAGTCTCCTGGAAGCAGAGCATGCA
 641 GATACTCATGCGGATACCCATTGGAATGACATCATCCCTCCCCAACCCCAGCTCTCTCTGCTCACCTTCCAAAGGCACCT
 721 GGAGGTGCAAGCCTCATGCATCTCCTTTCCTGAGCACCAGTAATGCTGCTGGCATCGCCTGCTTTCTCTCCAGTGGCTGG
 801 AGACTTCAAGCTGACTTCATTGTTTCCACCTTGGGAAAATCCCTAGGCTAAGCTGGGCCTGACCCAGCATCCTCTGCCTT
 881 CTAGGAAGTGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCACTCCACAAGCAATAGCTCCATGAGAGGCATGGACTGT
 961 GAGACTACTCCCTCCTGTTCCTCCTTCTCCATCCCCCATGGAGGAGGCATCGCACTTTACCAAGCTGATGCATTCCTACA
1041 GAAGTGGGCCCCGGATTTCTGCAAGTCGACTATCATGATGACTTCGCTGGAGGAAAGGTGATACGTACATACGCATTGAG
1121 GGCCTCAGCTTTATATAGTTCAAAATGCAGCAAACTTTTCAGAAAGCCACGTAAATAAATTGGTTAGGTTCCTTATACCA
1201 GTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGGCAGTGCTTTTTCTTTAGCATTCTGTCAATTCAAAGAAGGGAT
1281 CCTCTTTCAAAGGCTACCTTTATGAAGTAGACACTATTGCCCTCAGAATGAGAGAACATTAAACTACCAGTCTGGTAAGC
1361 TGGATTTTTTTCCCCATGGCTTTACTTCCTTGCTGTGTGACCTTGGGTGAGTCATTGTCTTCTTGGAGCCTCAGTTTCCC
1441 TGTCTGTAAAATGAGTTCTTTGAAATGGATGATCTCTAAGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACC
1521 ATCTATAATAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCTCCTGCCCTCAATTGTTTT
1601 TCTGGGCCTTGTTTTTTAGTTTCTGTATGTTTTAATCTCATGGGGATGAGCTCAGAGAAGCTCCGTGGGCCTGTTTCCCA
1681 ATCTGCAAAGTGTGAAGGGATTAGATGGGATGGTCTCTGAGGCTCTTTGTGGCATCAGCCTTGCCCAGTGCCACACAGTA
1761 TCTCCTGGCGTTCTAGGAGTCTAGGTATTATGGAAAGTACCCAAGTCTGTGTATCTCCTGTTCCTGTGCATCTCCTATGA
1841 ATTTCCTGGCAAGAGGAAGACTCAAGACTTCCTCCAGAGGAATTTGTCTTCTCTGCCTTCACTCAGCATGGGAACCAGTG
1921 TTCATCCTGACCTTGTCTGTATCAGATTTGGCAGTGAGGAGGCTTGGGGAGCACCTACCTTACTTTCAGGGACAGGAATC
2001 TATTGCTCATACTTCTGCTTCCCAGAGTTTTGCCAATCTAAAGGCATTGTCATGTGGCCTGCCTTTCCTGTCCACATCCC
2081 CACCTCTGATGCTCAAGATGCTATTTCCAAGATCTCTTACTGCTGCTTCTCCTGGCTTACTGGCCAGAAACTAGCTCACT
2161 CAAGGCTGCCATCCTTCACTTGCAGCCTCCCTGCCATTCTCCTTCACTGGTTGGCAACCTTGAGAGTTCAAAGAAAATCA
2241 ACCTCTGTGGTGGTCAACTAAAGGTATTAGGAAACTAAGTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAA
2321 GCCATGCCTAAAAAGATCTCGCCAATAATTCTTGTCTTTGAGTGTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTG
2401 CCAAAGTCTGGATCTTTCCACATTTCAGCAGCACCAACATCTGCTGCTACTCAAAATGTCCTGTTGAAGAGGGACAGCTG
2481 TGATGCCCTTTTGCTGGGGCTGCCATCTTGAAATCTGAGTGCAATAGGATTTGCTTGTAACAGTTATTTCAGGATATTTT
2561 GTTTCTTTAATCTGCACACTTTCTAGATAGATTTTATTTTTAAGTGTCCTCAGCATTGCAGAAAATAACATTGTAATAGC
2641 AAGTAAAGGCTGGAGGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATG
2721 TTTCTGAAAAGCAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGCCTCCAAGTAGAG
2801 GGGAGACCTGGTAGTTGAATAGTTGTTTAATCAAGCCAAATAGTCCCACTGCCCCCGGTCAACAAACCCACTTTTATGAC
2881 AGTTTTCTTCCGCAGCTTGGCTCTTAAATTTTACTGGCAGGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACC
2961 TGGCAATAGAGCTGCTTGGTTGGAGGAAGTGAAGCTGGCTTAGTACCAGCAGCTGATCTCTTCCACGTGCTGCTGCTTTT
3041 TTTGCCACTCTGATACTAAACCAGAGAAAGCTGCAGGTGGATAAAGAAGCTGTGGCTGTTTTTTGCTTTTGGGTGGCAAT
3121 GAGAAAGAGTCACAGTGTGGGTTAAAGGGATCTGCAGTGGGGCCAAGGATGCCACCCCACCCTCAGCTGTAGGCAAGCTT
3201 GCACATAAATAACCCCCGTCAGTGGAGTGTTCGGGATGCAGGGGGCACTATAGTGTTCTTGGACTTGTCGTCCTGGGGCA
3281 GTTTTAGTTCTTTATATTTAGTGGGTCAGTGCCAAGTGCTACCACTTCCCAATAAAGGAATGGGGACCCAGAGGCTGGGT
3361 CCCTGGCTACCTTGTTATGAGGTTTTGTTATTTCTCTGACAAGATTGCTTTGGAAAGAGCTGCTTTTAGGGATTATTTTT
3441 TGAATACCCCGAGTGGGGAGCAGGGTTCTCCTCAAAGCCTCACAACCATAGGATCATAGGAAAGGGGCCCTATTTTCCTG
3521 CTGCTTCCCAGCTCAGAACATATACTGAATGGAATGTATTTTTAAGAGAATAAAGTCTATTTTTTTGTATTTTAAAGATT
3601 GAGAGGGCTAAGAAAGTAGCCCTCAAATAAACTGTTATTGCATTATAGGCCCCTTTGTTGGGGGCAGCCTGTTGGTCCAC
3681 ACCTACTTGCTCAGGCAGGTGCTCTGGTCTCTCTCACCCCTGCCCCTTAGAGTCTAGGTGCAGCAGCTCCAAGCATGGGA
3761 CCAAGGAGGCCAGAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCATGTGTATCATTGGA
3841 GCTGCCTGTCTGCATGTATCCTCTGGCGCGAATGCTCTCTGTTGGCTCTGCAGTACAATATGTAACCAATAAAGCTCCCT
3921 CGTTTCCGTATACTCTGTGCGAGTCTGTGATGCCAGTTTTGTCAATGTCATCCCTGTGTATCATCTGTCTTCTATGCGTT
4001 GGCGCAGCTCTAGTATATTTATTTATTTCATTGTGTAATACTTAAAATTGGGTATTTTACCTAACCAATTACTGATACTG
4081 CAAGGACTGGAAACATTAACTGCCCTGATCCTGGTGTGCAGATTCTTTCCATTACTGCCACGAATTCTAAGACTAGGGGG
4161 GGAAAAGCCTTCTCCGTTTTCATCTTCCAGTCAGATCACCAATATATATAATGATGTCCCTTAACTCACAGTAAGAAAGA
4241 ATAAAACCACATTTAAGGGACATTACTTGGATTTGCAGTAACAGTGTTTATCATCTATCTGTCAGTCAGTCAGGAGCCCC
4321 TGGGAAGGAACCAGCATGTAACATGTTTTTATCATCTTATATGGCAAAAGGGACTTTGCAGATAAGGATGCTGGGATGAG
4401 GCAGAACATCCTAGATGATCCAGGTGGGCCTTAAATGTAATCACAGGTAGTATCCTTTTAAGAGAGAGACAAAAGATTTG
4481 ACTACAGGAGAAGGCAATGTGATGATGGAAGCAGAAACTGGAGTTATGTGCTCTGAGGATGGAGGAAGGAGCCACGAGCC
4561 TTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCC
4641 CTGTGTACCCATTTTAGACTTTAAGCTTCCAGAACTTTCGAATAGATTTCTGTTTTTTTAAGAGCCACTAAGTTTGTGGC
4721 AATCTGTTAAACCAGCTGTTACCTAAGCCCTTGATCCTATGTAGTGCGCTTCCCAAAATGTACACCACCACCTTTAGTAG
4801 AATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGACTGGTCTCCCAAAGGCTCAG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugUCUUUCA-CGAAGGGAGUUCUc 5'
            ||||| | || || ||||||: 
Target 5' ccAGAAACTAGC-TCACTCAAGGc 3'
 2144 - 2166 152.00 -15.10
2 
miRNA  3' ugUCUUUCACGAAGGGAGUUCUc 5'
            :| ||| |     ||||||| 
Target 5' ctGGCAAGAGGAAGACTCAAGAc 3'
 1846 - 1868 145.00 -12.20
3 
miRNA  3' ugucuuucacgaaggGAGUUCUc 5'
                         ||||||| 
Target 5' tccccacctctgatgCTCAAGAt 3'
 2077 - 2099 140.00 -7.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30105043 5 COSMIC
COSN31582022 5 COSMIC
COSN30524889 21 COSMIC
COSN5865270 27 COSMIC
COSN5865545 28 COSMIC
COSN5865224 29 COSMIC
COSN5853777 36 COSMIC
COSN5865512 45 COSMIC
COSN30498034 53 COSMIC
COSN30473122 54 COSMIC
COSN30497913 64 COSMIC
COSN30150314 67 COSMIC
COSN30503422 97 COSMIC
COSN30109888 126 COSMIC
COSN30175900 130 COSMIC
COSN31960193 131 COSMIC
COSN31546253 166 COSMIC
COSN1099949 272 COSMIC
COSN31487477 673 COSMIC
COSN15912930 704 COSMIC
COSN31514719 873 COSMIC
COSN31513190 896 COSMIC
COSN31518324 1105 COSMIC
COSN31602783 1117 COSMIC
COSN6447922 1179 COSMIC
COSN30175661 1191 COSMIC
COSN31541953 1251 COSMIC
COSN28207547 1253 COSMIC
COSN20227745 1579 COSMIC
COSN8337005 1593 COSMIC
COSN16455913 1770 COSMIC
COSN20229928 1874 COSMIC
COSN30022680 2104 COSMIC
COSN1099945 2272 COSMIC
COSN31570365 2335 COSMIC
COSN22752156 2414 COSMIC
COSN26956135 2459 COSMIC
COSN26585458 3461 COSMIC
COSN31482762 3473 COSMIC
COSN30163252 3534 COSMIC
COSN31547955 3568 COSMIC
COSN23175247 3588 COSMIC
COSN31595147 3868 COSMIC
COSN31518325 3869 COSMIC
COSN1436251 3900 COSMIC
COSN16708523 3917 COSMIC
COSN31532959 3997 COSMIC
COSN31522176 4003 COSMIC
COSN20094505 4155 COSMIC
COSN1436248 4461 COSMIC
COSN2491585 4644 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1437587998 3 dbSNP
rs185275170 4 dbSNP
rs757117338 5 dbSNP
rs1166644737 8 dbSNP
rs1488603924 12 dbSNP
rs1290322815 13 dbSNP
rs780497322 15 dbSNP
rs758833907 16 dbSNP
rs1309865512 18 dbSNP
rs1422216483 18 dbSNP
rs199601042 19 dbSNP
rs201465047 20 dbSNP
rs1333729551 21 dbSNP
rs750459214 24 dbSNP
rs200540840 25 dbSNP
rs917776753 26 dbSNP
rs373655445 29 dbSNP
rs747014450 32 dbSNP
rs1382298885 46 dbSNP
rs1159602900 47 dbSNP
rs1470100621 49 dbSNP
rs753978057 50 dbSNP
rs1201477556 51 dbSNP
rs990548780 53 dbSNP
rs959383667 54 dbSNP
rs1289532176 55 dbSNP
rs539270426 56 dbSNP
rs1256192987 59 dbSNP
rs777647695 62 dbSNP
rs202173482 66 dbSNP
rs905238402 87 dbSNP
rs966391517 88 dbSNP
rs1385659157 95 dbSNP
rs1021216193 98 dbSNP
rs1045512751 106 dbSNP
rs946732613 109 dbSNP
rs547327278 114 dbSNP
rs528462646 116 dbSNP
rs112030773 122 dbSNP
rs1389970254 126 dbSNP
rs758285468 130 dbSNP
rs1373209965 131 dbSNP
rs1197993796 133 dbSNP
rs1431381603 136 dbSNP
rs1254594976 137 dbSNP
rs935211959 145 dbSNP
rs922442938 148 dbSNP
rs1194058817 150 dbSNP
rs1457184251 154 dbSNP
rs976575965 169 dbSNP
rs1236558764 174 dbSNP
rs1197839081 182 dbSNP
rs1340149443 200 dbSNP
rs964135601 203 dbSNP
rs1018019462 204 dbSNP
rs984225171 211 dbSNP
rs996916818 218 dbSNP
rs1350712742 222 dbSNP
rs116072608 223 dbSNP
rs1487299885 224 dbSNP
rs530892592 227 dbSNP
rs1222928564 229 dbSNP
rs150563959 230 dbSNP
rs544073299 237 dbSNP
rs1272253581 240 dbSNP
rs1326434898 240 dbSNP
rs1396518300 243 dbSNP
rs898051022 248 dbSNP
rs887147876 255 dbSNP
rs1035154436 256 dbSNP
rs1174238600 270 dbSNP
rs949335272 278 dbSNP
rs368873274 282 dbSNP
rs1184169846 284 dbSNP
rs683893 286 dbSNP
rs1055384408 287 dbSNP
rs1198834578 292 dbSNP
rs1486719452 295 dbSNP
rs1281646910 320 dbSNP
rs141767105 325 dbSNP
rs1305134595 333 dbSNP
rs946730262 333 dbSNP
rs779089175 334 dbSNP
rs753266249 339 dbSNP
rs1370268763 349 dbSNP
rs1376810385 367 dbSNP
rs1296822050 376 dbSNP
rs1463967566 379 dbSNP
rs893829820 383 dbSNP
rs1405448754 393 dbSNP
rs1160113634 406 dbSNP
rs979216714 411 dbSNP
rs945018716 417 dbSNP
rs913568274 423 dbSNP
rs1052406528 427 dbSNP
rs572475000 430 dbSNP
rs187947352 435 dbSNP
rs1028463022 439 dbSNP
rs183623577 442 dbSNP
rs536778314 443 dbSNP
rs1206054585 449 dbSNP
rs41268107 452 dbSNP
rs1283225312 454 dbSNP
rs1231147321 455 dbSNP
rs910987527 459 dbSNP
rs1293388983 475 dbSNP
rs1343400765 484 dbSNP
rs1399273656 484 dbSNP
rs1480898277 486 dbSNP
rs1401056214 494 dbSNP
rs983906538 502 dbSNP
rs1389826615 504 dbSNP
rs1255388221 507 dbSNP
rs557024792 508 dbSNP
rs750933485 532 dbSNP
rs918263353 547 dbSNP
rs1193079818 551 dbSNP
rs1024727930 553 dbSNP
rs1013477576 571 dbSNP
rs1194591389 578 dbSNP
rs1224294236 580 dbSNP
rs1288177083 581 dbSNP
rs1211374144 584 dbSNP
rs896405386 591 dbSNP
rs972333538 596 dbSNP
rs1217453173 609 dbSNP
rs1393543345 625 dbSNP
rs1271851059 627 dbSNP
rs1431392314 636 dbSNP
rs191428961 638 dbSNP
rs187757741 641 dbSNP
rs937826454 649 dbSNP
rs1035271541 651 dbSNP
rs553676564 652 dbSNP
rs763724800 654 dbSNP
rs986885511 654 dbSNP
rs1421823928 677 dbSNP
rs969564300 678 dbSNP
rs1176543572 681 dbSNP
rs1472055454 683 dbSNP
rs933701519 684 dbSNP
rs1024198743 685 dbSNP
rs1011007738 689 dbSNP
rs537440587 691 dbSNP
rs1469224503 703 dbSNP
rs535315334 705 dbSNP
rs1253219221 733 dbSNP
rs893861152 738 dbSNP
rs1305185976 740 dbSNP
rs1361741411 743 dbSNP
rs1215035175 744 dbSNP
rs1183690611 749 dbSNP
rs1301207871 755 dbSNP
rs975675490 760 dbSNP
rs1371532180 772 dbSNP
rs758041493 776 dbSNP
rs549004 777 dbSNP
rs1356295912 781 dbSNP
rs1171253079 783 dbSNP
rs1414363161 789 dbSNP
rs982790020 793 dbSNP
rs1201617168 799 dbSNP
rs1231416090 801 dbSNP
rs1462608257 802 dbSNP
rs1454974882 810 dbSNP
rs951562979 819 dbSNP
rs1176206207 830 dbSNP
rs1479465668 849 dbSNP
rs187732632 851 dbSNP
rs901122346 855 dbSNP
rs774590568 871 dbSNP
rs1485085816 874 dbSNP
rs1278085103 877 dbSNP
rs1236489953 883 dbSNP
rs1034007713 894 dbSNP
rs1241478896 898 dbSNP
rs1336689144 901 dbSNP
rs1375840028 906 dbSNP
rs1299004722 907 dbSNP
rs557681296 909 dbSNP
rs765105833 912 dbSNP
rs759366580 914 dbSNP
rs1319105064 915 dbSNP
rs1435893820 921 dbSNP
rs776715170 925 dbSNP
rs1336775445 932 dbSNP
rs533972417 935 dbSNP
rs1382166417 936 dbSNP
rs1043597945 938 dbSNP
rs1409675893 959 dbSNP
rs945080287 966 dbSNP
rs775415324 967 dbSNP
rs1474592183 972 dbSNP
rs1254779962 979 dbSNP
rs568863060 986 dbSNP
rs918335495 989 dbSNP
rs1259890838 993 dbSNP
rs1050888819 996 dbSNP
rs933648354 998 dbSNP
rs1181587632 999 dbSNP
rs972408743 1011 dbSNP
rs570005274 1012 dbSNP
rs1340415381 1014 dbSNP
rs1287681530 1021 dbSNP
rs367783198 1030 dbSNP
rs1039897802 1041 dbSNP
rs551859040 1045 dbSNP
rs1460608292 1051 dbSNP
rs143628885 1052 dbSNP
rs866786419 1053 dbSNP
rs1475272832 1063 dbSNP
rs1351694409 1065 dbSNP
rs1291492531 1067 dbSNP
rs1244281300 1069 dbSNP
rs746889737 1072 dbSNP
rs183222708 1075 dbSNP
rs1316282466 1076 dbSNP
rs540072866 1079 dbSNP
rs528363161 1083 dbSNP
rs561286203 1085 dbSNP
rs542214902 1086 dbSNP
rs1382422440 1088 dbSNP
rs575205854 1094 dbSNP
rs1325988564 1096 dbSNP
rs1384424460 1104 dbSNP
rs1389651402 1104 dbSNP
rs901193179 1105 dbSNP
rs1161408552 1112 dbSNP
rs1041416539 1113 dbSNP
rs1006816290 1118 dbSNP
rs1372069745 1133 dbSNP
rs992962829 1133 dbSNP
rs889662276 1135 dbSNP
rs1168156370 1138 dbSNP
rs1430254680 1141 dbSNP
rs1426370625 1161 dbSNP
rs1034356030 1170 dbSNP
rs550194244 1171 dbSNP
rs556747369 1174 dbSNP
rs1474389917 1177 dbSNP
rs17278869 1179 dbSNP
rs577841547 1181 dbSNP
rs1195496535 1195 dbSNP
rs148923644 1210 dbSNP
rs1232525063 1211 dbSNP
rs1268503652 1217 dbSNP
rs1327500197 1220 dbSNP
rs1387000578 1233 dbSNP
rs931142905 1234 dbSNP
rs771955491 1237 dbSNP
rs892339136 1241 dbSNP
rs1051278191 1244 dbSNP
rs1292963850 1250 dbSNP
rs1036723524 1254 dbSNP
rs1172995441 1271 dbSNP
rs997952290 1277 dbSNP
rs938408861 1281 dbSNP
rs1194440032 1286 dbSNP
rs1039362411 1290 dbSNP
rs191305246 1292 dbSNP
rs747923507 1296 dbSNP
rs1280229753 1298 dbSNP
rs1232831674 1302 dbSNP
rs910120940 1302 dbSNP
rs980139409 1305 dbSNP
rs755551817 1312 dbSNP
rs778819170 1316 dbSNP
rs77281526 1317 dbSNP
rs1334768887 1320 dbSNP
rs1365894500 1326 dbSNP
rs930131485 1331 dbSNP
rs917433387 1332 dbSNP
rs993284662 1333 dbSNP
rs556027910 1337 dbSNP
rs1432798813 1338 dbSNP
rs762042890 1343 dbSNP
rs1174063439 1348 dbSNP
rs958839408 1349 dbSNP
rs927250151 1371 dbSNP
rs1184324086 1372 dbSNP
rs1419745692 1373 dbSNP
rs989681387 1394 dbSNP
rs958178693 1395 dbSNP
rs1486956027 1403 dbSNP
rs537002213 1407 dbSNP
rs1022219224 1409 dbSNP
rs1031114148 1412 dbSNP
rs1204891495 1412 dbSNP
rs188557122 1413 dbSNP
rs1349052857 1415 dbSNP
rs1258577129 1419 dbSNP
rs1009520250 1422 dbSNP
rs1475752004 1428 dbSNP
rs978185786 1429 dbSNP
rs965809539 1442 dbSNP
rs551553676 1444 dbSNP
rs1357254865 1452 dbSNP
rs533228935 1454 dbSNP
rs1029499721 1455 dbSNP
rs565878591 1470 dbSNP
rs1428716403 1474 dbSNP
rs1382602910 1482 dbSNP
rs754575163 1483 dbSNP
rs753594536 1488 dbSNP
rs1417198619 1490 dbSNP
rs998319634 1496 dbSNP
rs1476254071 1501 dbSNP
rs182943312 1510 dbSNP
rs373979719 1519 dbSNP
rs1286796660 1520 dbSNP
rs1005155575 1521 dbSNP
rs1270030420 1525 dbSNP
rs888151522 1527 dbSNP
rs1329470397 1529 dbSNP
rs1272197966 1531 dbSNP
rs1230901498 1533 dbSNP
rs1336386153 1533 dbSNP
rs1284708159 1535 dbSNP
rs889746072 1542 dbSNP
rs1324415022 1543 dbSNP
rs190738165 1558 dbSNP
rs370585552 1566 dbSNP
rs995325562 1567 dbSNP
rs897010617 1572 dbSNP
rs1322127059 1581 dbSNP
rs1463071038 1588 dbSNP
rs750720927 1590 dbSNP
rs1280843538 1592 dbSNP
rs1047271081 1603 dbSNP
rs1167782071 1611 dbSNP
rs1345803818 1612 dbSNP
rs1244153492 1625 dbSNP
rs1189577318 1627 dbSNP
rs1036794643 1628 dbSNP
rs1468357821 1634 dbSNP
rs1251975854 1637 dbSNP
rs1211511879 1641 dbSNP
rs938450529 1664 dbSNP
rs1278700258 1665 dbSNP
rs1439831255 1676 dbSNP
rs592611 1681 dbSNP
rs1329384924 1706 dbSNP
rs1337408294 1708 dbSNP
rs1271902777 1709 dbSNP
rs111286208 1711 dbSNP
rs547590077 1717 dbSNP
rs1324132365 1720 dbSNP
rs916866524 1720 dbSNP
rs1443458007 1729 dbSNP
rs1350521464 1734 dbSNP
rs560986675 1737 dbSNP
rs1057315826 1749 dbSNP
rs1422210743 1756 dbSNP
rs937535846 1756 dbSNP
rs1169797772 1758 dbSNP
rs768800409 1760 dbSNP
rs532394687 1761 dbSNP
rs936879926 1769 dbSNP
rs924114374 1770 dbSNP
rs988424431 1771 dbSNP
rs755634083 1772 dbSNP
rs11810808 1773 dbSNP
rs1020111870 1779 dbSNP
rs1274950767 1786 dbSNP
rs1205871515 1787 dbSNP
rs1234964923 1791 dbSNP
rs34661815 1794 dbSNP
rs749502188 1794 dbSNP
rs1301043882 1814 dbSNP
rs1236734845 1819 dbSNP
rs954168223 1820 dbSNP
rs1279212452 1830 dbSNP
rs976597278 1832 dbSNP
rs1026921170 1834 dbSNP
rs1309168261 1835 dbSNP
rs1434703834 1836 dbSNP
rs186270324 1837 dbSNP
rs1175959300 1850 dbSNP
rs1425370890 1851 dbSNP
rs775523966 1851 dbSNP
rs1176276331 1856 dbSNP
rs897041811 1863 dbSNP
rs75982213 1873 dbSNP
rs1003114052 1879 dbSNP
rs1485327991 1882 dbSNP
rs906986096 1886 dbSNP
rs888076286 1888 dbSNP
rs1211915270 1890 dbSNP
rs1312570768 1892 dbSNP
rs1283744216 1909 dbSNP
rs1222347916 1923 dbSNP
rs1044524667 1927 dbSNP
rs580878 1930 dbSNP
rs1414670281 1931 dbSNP
rs892824160 1933 dbSNP
rs1451800919 1937 dbSNP
rs1054090723 1939 dbSNP
rs1315379363 1941 dbSNP
rs936911004 1945 dbSNP
rs1466814913 1954 dbSNP
rs924187839 1960 dbSNP
rs1157902644 1961 dbSNP
rs548688229 1962 dbSNP
rs1380547895 1963 dbSNP
rs994800283 1971 dbSNP
rs1474607447 1975 dbSNP
rs896056169 1977 dbSNP
rs1334783607 1979 dbSNP
rs1483451964 1980 dbSNP
rs1241362462 1992 dbSNP
rs139074089 1996 dbSNP
rs1269041231 1997 dbSNP
rs1232695796 1998 dbSNP
rs1359829220 1999 dbSNP
rs912673683 1999 dbSNP
rs1158570074 2001 dbSNP
rs1399205284 2002 dbSNP
rs937522626 2006 dbSNP
rs1361675140 2012 dbSNP
rs1410556451 2017 dbSNP
rs1178186460 2018 dbSNP
rs1433369936 2024 dbSNP
rs906065783 2027 dbSNP
rs553150568 2038 dbSNP
rs1460405929 2046 dbSNP
rs541591782 2049 dbSNP
rs146486844 2060 dbSNP
rs1043127889 2062 dbSNP
rs1166812874 2064 dbSNP
rs33999478 2067 dbSNP
rs1424375519 2068 dbSNP
rs35702179 2082 dbSNP
rs574186188 2089 dbSNP
rs985969669 2093 dbSNP
rs1184514360 2094 dbSNP
rs1184886764 2114 dbSNP
rs1466101810 2119 dbSNP
rs954127616 2121 dbSNP
rs746161317 2124 dbSNP
rs1213381329 2134 dbSNP
rs762344836 2137 dbSNP
rs1267357902 2147 dbSNP
rs142458071 2159 dbSNP
rs947454687 2182 dbSNP
rs1241052741 2185 dbSNP
rs147707200 2186 dbSNP
rs781090260 2187 dbSNP
rs945737186 2188 dbSNP
rs1366384516 2192 dbSNP
rs1320805274 2195 dbSNP
rs1213156493 2199 dbSNP
rs913211343 2206 dbSNP
rs576690105 2223 dbSNP
rs1284660444 2225 dbSNP
rs1294814361 2238 dbSNP
rs751845129 2241 dbSNP
rs1015457459 2242 dbSNP
rs1451023712 2252 dbSNP
rs1357177494 2255 dbSNP
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rs1193222167 2260 dbSNP
rs971618499 2260 dbSNP
rs1452855118 2268 dbSNP
rs1453291499 2271 dbSNP
rs1269780802 2276 dbSNP
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rs1250057709 2294 dbSNP
rs1208004176 2300 dbSNP
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rs1268897357 3136 dbSNP
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rs1432513157 3177 dbSNP
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rs977214753 3213 dbSNP
rs139076782 3217 dbSNP
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rs1431420522 3301 dbSNP
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rs925855816 3430 dbSNP
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rs1400259027 3499 dbSNP
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rs760658679 3652 dbSNP
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rs1000188178 3709 dbSNP
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rs1043347319 4847 dbSNP
rs1355229318 4850 dbSNP
rs1242987255 4852 dbSNP
rs1175836875 4855 dbSNP
rs1468655669 4856 dbSNP
rs1025256383 4866 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000418342.1 | 3UTR | UCAAGACUUCCUCCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000418342.1 | 3UTR | UCAAGACUUCCUCCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE21032 Prostate cancer -0.329 1.2e-3 -0.312 2.0e-3 83 Click to see details
GSE28260 Renal cortex and medulla 0.569 2.1e-2 0.573 2.0e-2 13 Click to see details
GSE17306 Multiple myeloma -0.264 3.3e-2 -0.190 9.6e-2 49 Click to see details
GSE27834 Pluripotent stem cells 0.434 4.7e-2 0.409 5.8e-2 16 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.325 5.6e-2 -0.362 3.8e-2 25 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.253 1.1e-1 0.283 8.5e-2 25 Click to see details
GSE19783 ER+ ER+ breast cancer -0.273 1.2e-1 -0.402 3.9e-2 20 Click to see details
GSE19350 CNS germ cell tumors 0.326 1.5e-1 0.231 2.4e-1 12 Click to see details
GSE21849 B cell lymphoma 0.185 1.7e-1 0.367 2.5e-2 29 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.183 2.2e-1 -0.054 4.1e-1 20 Click to see details
GSE21687 Ependynoma primary tumors 0.079 2.7e-1 0.032 4.0e-1 64 Click to see details
GSE14794 Lymphoblastoid cells -0.051 3.2e-1 -0.032 3.8e-1 90 Click to see details
GSE32688 Pancreatic cancer -0.073 3.5e-1 -0.160 1.9e-1 32 Click to see details
GSE42095 Differentiated embryonic stem cells 0.082 3.5e-1 0.004 4.9e-1 23 Click to see details
GSE19536 Breast cancer 0.032 3.8e-1 0.038 3.5e-1 100 Click to see details
GSE38226 Liver fibrosis 0.058 4.0e-1 -0.018 4.7e-1 21 Click to see details
GSE28544 Breast cancer -0.037 4.3e-1 -0.069 3.7e-1 24 Click to see details
GSE19783 ER- ER- breast cancer 0.019 4.3e-1 0.014 4.5e-1 79 Click to see details
GSE17498 Multiple myeloma 0.015 4.6e-1 -0.033 4.2e-1 40 Click to see details
GSE26953 Aortic valvular endothelial cells -0.011 4.8e-1 0.057 4.0e-1 24 Click to see details
GSE26953 Aortic valvular endothelial cells -0.011 4.8e-1 0.057 4.0e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
UCEC -0.986 0.01 -1.000 0.5 4 Click to see details
LUSC -0.615 0.04 -0.533 0.07 9 Click to see details
BLCA -0.414 0.15 -0.024 0.48 8 Click to see details
LIHC -0.273 0.24 -0.350 0.18 9 Click to see details
STAD -0.396 0.25 -0.300 0.31 5 Click to see details
BRCA 0.075 0.29 0.109 0.21 56 Click to see details
HNSC -0.128 0.3 -0.096 0.34 20 Click to see details
THCA 0.041 0.44 0.029 0.46 16 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
PRAD -0.015 0.48 0.055 0.43 13 Click to see details
234 hsa-miR-526b-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT382022 FAM49B family with sequence similarity 49 member B 2 2
MIRT442559 CAB39 calcium binding protein 39 2 2
MIRT443783 ST13 ST13, Hsp70 interacting protein 2 2
MIRT443886 CNKSR3 CNKSR family member 3 2 2
MIRT443970 SSH2 slingshot protein phosphatase 2 2 2
MIRT444050 PROX2 prospero homeobox 2 2 2
MIRT444128 BRCA2 BRCA2, DNA repair associated 2 2
MIRT444144 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT444171 RBM7 RNA binding motif protein 7 2 2
MIRT444185 SCAMP1 secretory carrier membrane protein 1 2 2
MIRT444217 METTL12 methyltransferase like 12 2 2
MIRT444474 WNT5A Wnt family member 5A 2 2
MIRT444582 GPR89B G protein-coupled receptor 89B 2 2
MIRT444659 TSPAN14 tetraspanin 14 2 2
MIRT444755 LUZP1 leucine zipper protein 1 2 2
MIRT444768 ZNF90 zinc finger protein 90 2 2
MIRT444862 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT444904 KIAA1841 KIAA1841 2 2
MIRT444941 HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 2 2
MIRT444966 CDH7 cadherin 7 2 2
MIRT445008 TMEM106B transmembrane protein 106B 2 2
MIRT445014 RBMS3 RNA binding motif single stranded interacting protein 3 2 2
MIRT445036 TRPS1 transcriptional repressor GATA binding 1 2 2
MIRT445045 PURB purine rich element binding protein B 2 2
MIRT445075 CXXC4 CXXC finger protein 4 2 2
MIRT445148 KLHL23 kelch like family member 23 2 2
MIRT445228 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT445258 C9orf66 chromosome 9 open reading frame 66 2 2
MIRT445263 LOH12CR2 loss of heterozygosity, 12, chromosomal region 2 (non-protein coding) 2 4
MIRT445413 ACSL6 acyl-CoA synthetase long chain family member 6 2 2
MIRT445431 ESD esterase D 2 2
MIRT445475 KDM6A lysine demethylase 6A 2 2
MIRT445618 CLIC4 chloride intracellular channel 4 2 2
MIRT445709 RBL1 RB transcriptional corepressor like 1 2 2
MIRT445736 ITM2A integral membrane protein 2A 2 2
MIRT445787 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT445796 IFIT1 interferon induced protein with tetratricopeptide repeats 1 2 2
MIRT445801 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT445805 NFATC2 nuclear factor of activated T-cells 2 2 2
MIRT445814 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT445861 ZNF451 zinc finger protein 451 2 2
MIRT445871 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT445964 IKZF5 IKAROS family zinc finger 5 2 2
MIRT445974 TSPYL1 TSPY like 1 2 2
MIRT446013 VNN1 vanin 1 2 2
MIRT446021 HBS1L HBS1 like translational GTPase 2 2
MIRT446080 RCOR3 REST corepressor 3 2 2
MIRT446084 SLC30A10 solute carrier family 30 member 10 2 2
MIRT446102 TSC22D2 TSC22 domain family member 2 2 2
MIRT446174 ZNF37A zinc finger protein 37A 2 2
MIRT446185 FGF1 fibroblast growth factor 1 2 2
MIRT446197 GTPBP4 GTP binding protein 4 2 2
MIRT446212 SLC25A44 solute carrier family 25 member 44 2 2
MIRT446229 C17orf80 chromosome 17 open reading frame 80 2 2
MIRT446311 TBC1D8B TBC1 domain family member 8B 2 2
MIRT446362 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT446383 SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein 2 2
MIRT446411 OCA2 OCA2 melanosomal transmembrane protein 2 2
MIRT446535 GOLGA8B golgin A8 family member B 2 2
MIRT446544 ASTN2 astrotactin 2 2 2
MIRT446563 IDS iduronate 2-sulfatase 2 2
MIRT446569 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT446596 AKAP1 A-kinase anchoring protein 1 2 2
MIRT446703 FUT10 fucosyltransferase 10 2 2
MIRT446778 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT446782 LEPROTL1 leptin receptor overlapping transcript like 1 2 2
MIRT446787 KIF1C kinesin family member 1C 2 2
MIRT446795 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT446801 C5orf30 chromosome 5 open reading frame 30 2 2
MIRT446841 FOXP1 forkhead box P1 2 2
MIRT446848 FIBIN fin bud initiation factor homolog (zebrafish) 2 2
MIRT446865 NBPF3 NBPF member 3 2 2
MIRT446883 TRIM25 tripartite motif containing 25 2 2
MIRT446904 RGS5 regulator of G protein signaling 5 2 2
MIRT446910 GPR89A G protein-coupled receptor 89A 2 2
MIRT446931 AGGF1 angiogenic factor with G-patch and FHA domains 1 2 2
MIRT446942 ZMAT3 zinc finger matrin-type 3 2 2
MIRT446976 SUSD5 sushi domain containing 5 2 2
MIRT447005 RSF1 remodeling and spacing factor 1 2 2
MIRT447027 TACR3 tachykinin receptor 3 2 2
MIRT447037 ZNF439 zinc finger protein 439 2 2
MIRT447050 STARD5 StAR related lipid transfer domain containing 5 2 2
MIRT447056 KCNAB1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 2 2
MIRT447145 HHIP hedgehog interacting protein 2 2
MIRT447152 PRSS12 protease, serine 12 2 2
MIRT447179 PGRMC2 progesterone receptor membrane component 2 2 2
MIRT447198 DNAJC5G DnaJ heat shock protein family (Hsp40) member C5 gamma 2 2
MIRT447210 APBB2 amyloid beta precursor protein binding family B member 2 2 2
MIRT447238 IHH indian hedgehog 2 2
MIRT447271 FZD5 frizzled class receptor 5 2 2
MIRT447322 ZSCAN21 zinc finger and SCAN domain containing 21 2 2
MIRT447390 TMPRSS15 transmembrane protease, serine 15 2 2
MIRT447409 MED21 mediator complex subunit 21 2 2
MIRT447478 NYAP2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 2 2
MIRT447549 C14orf37 chromosome 14 open reading frame 37 2 2
MIRT447628 NDST4 N-deacetylase and N-sulfotransferase 4 2 2
MIRT447645 RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 2 2
MIRT447694 OGN osteoglycin 2 2
MIRT447733 MOCOS molybdenum cofactor sulfurase 2 2
MIRT447739 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT447868 TRNT1 tRNA nucleotidyl transferase 1 2 2
MIRT447979 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT447992 CDX1 caudal type homeobox 1 2 2
MIRT448067 SLC25A43 solute carrier family 25 member 43 2 2
MIRT448113 SEMA4G semaphorin 4G 2 2
MIRT448129 CCDC80 coiled-coil domain containing 80 2 2
MIRT448171 ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 2 2
MIRT448299 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT448447 SMC3 structural maintenance of chromosomes 3 2 2
MIRT448467 SLC45A4 solute carrier family 45 member 4 2 2
MIRT448472 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 4
MIRT448481 SEMA4F ssemaphorin 4F 2 2
MIRT448747 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT448765 GOLGA8A golgin A8 family member A 2 2
MIRT448830 FGD4 FYVE, RhoGEF and PH domain containing 4 2 2
MIRT448852 FEM1C fem-1 homolog C 2 2
MIRT448899 CLOCK clock circadian regulator 2 2
MIRT448905 CLCN6 chloride voltage-gated channel 6 2 4
MIRT448951 CDK19 cyclin dependent kinase 19 2 2
MIRT448974 CADM2 cell adhesion molecule 2 2 2
MIRT449021 AMER2 APC membrane recruitment protein 2 2 2
MIRT449053 NUDT3 nudix hydrolase 3 2 2
MIRT449065 ZNF24 zinc finger protein 24 2 2
MIRT449069 CNDP2 carnosine dipeptidase 2 2 2
MIRT449120 XRRA1 X-ray radiation resistance associated 1 2 2
MIRT449177 LUC7L3 LUC7 like 3 pre-mRNA splicing factor 2 2
MIRT449304 PARP3 poly(ADP-ribose) polymerase family member 3 2 2
MIRT449319 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT449345 GEMIN6 gem nuclear organelle associated protein 6 2 2
MIRT449424 GPR75 G protein-coupled receptor 75 2 2
MIRT449440 STAMBP STAM binding protein 2 2
MIRT449474 ZNF84 zinc finger protein 84 2 2
MIRT449504 TM6SF1 transmembrane 6 superfamily member 1 2 2
MIRT449599 INIP INTS3 and NABP interacting protein 2 4
MIRT449611 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 2 2
MIRT449630 ELAVL4 ELAV like RNA binding protein 4 2 2
MIRT449654 PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 2 2
MIRT449679 CDR1 cerebellar degeneration related protein 1 2 2
MIRT449730 CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 2 2
MIRT449777 NUDT16 nudix hydrolase 16 2 2
MIRT449826 TLR4 toll like receptor 4 2 2
MIRT449832 AGK acylglycerol kinase 2 2
MIRT449855 PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma 2 2
MIRT449927 TPST2 tyrosylprotein sulfotransferase 2 2 2
MIRT450126 NSUN3 NOP2/Sun RNA methyltransferase family member 3 2 2
MIRT450202 ABHD15 abhydrolase domain containing 15 2 2
MIRT450243 TRIM66 tripartite motif containing 66 2 2
MIRT450268 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT450337 MRPL17 mitochondrial ribosomal protein L17 2 4
MIRT450341 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 2 2
MIRT450344 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT450374 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT450408 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT450427 CPOX coproporphyrinogen oxidase 2 2
MIRT450451 ZDHHC2 zinc finger DHHC-type containing 2 2 2
MIRT450463 ENOX1 ecto-NOX disulfide-thiol exchanger 1 2 2
MIRT450527 PGLS 6-phosphogluconolactonase 2 2
MIRT450540 SHFM1 SEM1, 26S proteasome complex subunit 2 2
MIRT450631 ZNF654 zinc finger protein 654 2 2
MIRT450652 TMEM70 transmembrane protein 70 2 2
MIRT450670 SGIP1 SH3 domain GRB2 like endophilin interacting protein 1 2 2
MIRT450685 RPN2 ribophorin II 2 2
MIRT450707 RNF152 ring finger protein 152 2 2
MIRT450765 PPAPDC2 phospholipid phosphatase 6 2 2
MIRT450812 LIFR LIF receptor alpha 2 2
MIRT450867 GPR107 G protein-coupled receptor 107 2 2
MIRT464938 TXLNA taxilin alpha 2 4
MIRT472332 NETO2 neuropilin and tolloid like 2 2 2
MIRT478672 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT485664 CDC25B cell division cycle 25B 2 2
MIRT497300 CD300LB CD300 molecule like family member b 2 2
MIRT497587 SLC23A1 solute carrier family 23 member 1 2 2
MIRT497762 KIAA0895 KIAA0895 2 2
MIRT497815 STAT5B signal transducer and activator of transcription 5B 2 2
MIRT497827 GPR26 G protein-coupled receptor 26 2 2
MIRT497855 LGR5 leucine rich repeat containing G protein-coupled receptor 5 2 2
MIRT497975 XBP1P1 X-box binding protein 1 pseudogene 1 2 2
MIRT498178 CREB1 cAMP responsive element binding protein 1 2 2
MIRT498333 PRELID2 PRELI domain containing 2 2 2
MIRT501771 NRBF2 nuclear receptor binding factor 2 2 6
MIRT504823 RAP2A RAP2A, member of RAS oncogene family 2 6
MIRT510498 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 2 2
MIRT513131 ZNF431 zinc finger protein 431 2 2
MIRT524341 CREBRF CREB3 regulatory factor 2 4
MIRT528236 SPIN4 spindlin family member 4 2 2
MIRT534138 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 2 2
MIRT535420 PDZD8 PDZ domain containing 8 2 2
MIRT535876 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT540789 TMOD2 tropomodulin 2 2 2
MIRT540925 OIP5 Opa interacting protein 5 2 2
MIRT544028 STAM signal transducing adaptor molecule 2 2
MIRT546027 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT551818 TMEM138 transmembrane protein 138 2 2
MIRT556115 MLEC malectin 2 4
MIRT557669 GATA6 GATA binding protein 6 2 2
MIRT568897 MGRN1 mahogunin ring finger 1 2 2
MIRT573538 MDM2 MDM2 proto-oncogene 2 2
MIRT615473 RPS6KA3 ribosomal protein S6 kinase A3 2 2
MIRT618257 DDX51 DEAD-box helicase 51 2 2
MIRT619905 FAM43B family with sequence similarity 43 member B 2 2
MIRT621109 SP110 SP110 nuclear body protein 2 2
MIRT622331 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT622682 PLSCR1 phospholipid scramblase 1 2 2
MIRT624095 DNAJC16 DnaJ heat shock protein family (Hsp40) member C16 2 2
MIRT628661 FAM83C family with sequence similarity 83 member C 2 2
MIRT639259 MANEAL mannosidase endo-alpha like 2 2
MIRT641171 LYPLA1 lysophospholipase I 2 2
MIRT642966 FUT6 fucosyltransferase 6 2 2
MIRT643539 SLC25A17 solute carrier family 25 member 17 2 2
MIRT648679 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT649446 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 2 2
MIRT651353 ZBTB40 zinc finger and BTB domain containing 40 2 2
MIRT651565 WHSC1L1 nuclear receptor binding SET domain protein 3 2 2
MIRT652242 TPPP tubulin polymerization promoting protein 2 2
MIRT653925 SERPINC1 serpin family C member 1 2 2
MIRT654113 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT658395 FAM221B family with sequence similarity 221 member B 2 2
MIRT658581 EPHB1 EPH receptor B1 2 2
MIRT660026 C16orf52 chromosome 16 open reading frame 52 2 2
MIRT661405 GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2 2
MIRT664138 ATP6V1G3 ATPase H+ transporting V1 subunit G3 2 2
MIRT665655 TRIM33 tripartite motif containing 33 2 2
MIRT691641 SLC43A3 solute carrier family 43 member 3 2 2
MIRT692708 MEAF6 MYST/Esa1 associated factor 6 2 2
MIRT693859 IYD iodotyrosine deiodinase 2 2
MIRT702910 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT705052 C5orf15 chromosome 5 open reading frame 15 2 2
MIRT705124 C1orf52 chromosome 1 open reading frame 52 2 2
MIRT705534 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT708676 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT709868 A1CF APOBEC1 complementation factor 2 2
MIRT715657 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT716567 DLGAP2 DLG associated protein 2 2 2
MIRT737090 SIK2 salt inducible kinase 2 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-526b Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-526b 17beta-estradiol (E2) approved 5757 Microarray MCF-7AKT breast cancer cells 19528081 2009 down-regulated
miR-526b 1,2,6-Tri-O-galloyl-beta-D-glucopyranose NULL NULL Microarray HepG2 hepatocarcinoma cells. 22506400 2011 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-526b Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-mir-526b Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-526b-5p Cisplatin 5460033 NSC119875 approved resistant High Germ Cell Tumor cell line (NTERA-2)
hsa-miR-526b-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-526b-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-526b-5p Paclitaxel 36314 NSC125973 approved sensitive Low Non-Small Cell Lung Cancer cell line (A549, H3122)
hsa-miR-526b-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-526b-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-526b-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-526b-5p Paclitaxel 36314 NSC125973 approved resistant cell line (HS578T)
hsa-miR-526b-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-526b-5p Testosterone+Letrozole sensitive cell line (MCF-7)
hsa-miR-526b-5p Testosterone+Exemestane sensitive cell line (MCF-7)
hsa-miR-526b-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-526b-5p Fluorouracil 3385 NSC19893 approved resistant cell line (HCT15)
hsa-miR-526b-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-526b-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-526b-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-526b-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-526b-5p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide sensitive cell line (Bads-200)

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