miRTarBase - #MIRT445064


—
pre-miRNA Information
pre-miRNA hsa-mir-6127   
Genomic Coordinates chr1: 22633258 - 22633366
Description Homo sapiens miR-6127 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6127
Sequence 21| UGAGGGAGUGGGUGGGAGG |39
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 17 1 - 22633330 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1235631264 1 dbSNP
rs1456508376 2 dbSNP
rs961421537 3 dbSNP
rs1017317298 4 dbSNP
rs1188516918 10 dbSNP
rs564733534 16 dbSNP
rs777916911 18 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol C16orf87   
Synonyms -
Description chromosome 16 open reading frame 87
Transcript NM_001001436   
Expression
Putative miRNA Targets on C16orf87
3'UTR of C16orf87
(miRNA target sites are highlighted)		 
>C16orf87|NM_001001436|3'UTR
   1 TACTTGTTTGCAAAATCTGCTGAAACTTCTGTCAGGATAACATCAGCAAATTCTCAAACAGTTATGGACTCTCAGGAGCA
  81 TTCTGACTGCATCAATAAGGGCCATCGATTGTTTCTTTCTCGCCTGTCGTTTAGCCTGTGCCACACTTCGGGAGCAAAGC
 161 TGTGTAGGCTTGGACTGTTCTGGGATTTCCTTGTTTACCAAGGAGTATTGTCAGTGTTTTGTGTTTGGGATATAAGTAAG
 241 TGTATTTGCCAACAACAAAAAAAAACCAACAAAAATGCTGGATGGATGTTAAAGGATAAAAAGTGATGGGGTATGGGGTA
 321 GGTATGAAAACTAGGGTAATAAGATGCTTGATTGTTTTCAGGTTTGCCACCAGAGATGCAATATTTTAAATACTGTCAGA
 401 AAGAGTGATTTTTAAAAATATATATTTCAGATTTTCAGTGCTAACAGATTGCATATATACAGTTCATTTACTTTTATTAA
 481 ATTGGCAATCGATATTTTATTGAATGGGGAATTAAGAATATAAACTGTAAATTTTGTCTTAAATTGATTTTTTTTCTTGG
 561 CCTTTATTTTTATTACTTAAGGTATGAGTTATATTTTAGGAGATACTTTCTAGACAGTTTGAAGTTTGGGTGCTATATGA
 641 AGAAAAACATTTAATGATATACTCAGATATAAACACCTTGTTTTCTTGAATGTAATTTATTTATTAGCTAAAAAAAAAAA
 721 ACAAACTGCTCTCAAGATGGTGCCTGTTAACCTAAACATGAAATATATTTATTACATGCAAAATATTTCTTAGCCACTTT
 801 TAAGCAGTAATGTTTTATCTGAATGGATATTTGTTTCTATATCCTGATAATTATTTAAATTGTTACTTTCAATCTGGAAG
 881 AAAAAATAAACCTTAATATTGAAACTAAGTAGATTAAATAGTGTGATAAAAGTTTTTTGTTCTGGTGAAGTTTGTGAAAT
 961 ATATTTAAATTCTTAATTTTTCTAGTGTTAAGTCATAATCGTTTATAGTTGATTTATATTAAATGCTTTTGCATTTTGGC
1041 ATATCAATTTAATGATTAACATATTCAAACTTGGTAATCACTCCCCTTATTTTCAGTCGCTCTTCCCCCAATCTGTTTAG
1121 AAATCCTTTTAAAGCCTTCTTACAGAAGATAGTCATCAGTTAGATTTAGCCCCCTTTTAAGAGAATCTCCCTTTCAATTT
1201 TAGCCGTAACATTATCAATTTCAGACTTCATCCTGCATCTCCCATCACCTCCTCAAAGAAAAAAGGTCAACATTTTTTCC
1281 TACTTTATTTAAATGGTAACCAGCAGAGGGAGCTTAAGAGGTACTCTAGATAGGATAAAGAATTTTCCTAAGGATTCCTT
1361 TTCCTTTAATCCCTGTATCTATCTGCAGGTACTACTGCAACTATTTTGTATGCATTTTATTTATTTATTTAGGAGACAGA
1441 GTCTTGCTCGGTCGCCCAGGCTGGAGTGCAGTGGCACTGTCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGAT
1521 TCTTATGCCTCAGCCTCCTGAGTAGCTGTGACTAGAGGCGTGCGCCACCACGCCTGGCTGTTTTTTTTTTTGTATTTTTT
1601 AGTACAGATGGGGTCTCAGCATGTTGGCCAGGCTGGTCTCAAATTCCTGGCCTTAGGTGATCTGCCCGCCTTGGCCTCCC
1681 AAAGTGCTGGGATTACAGGCATGAGCCACTGCACTCAGCCTTGTGTGCGTTTTAGAGTCTTAACTAGTAGTTTCCCCAAT
1761 AATGTAATGTGATTTTATCTTTGAAACATACTGTAAGGAAACTTTTGATTTTAAGTAAAAAAGCTTAAAAATGATTAATA
1841 TCTAAAAATGCTTGTATACATATATATGTCCTCAGAAAAAGCAAGAACAGCTTGTGGAATAAGCACGTCTTTAAGGAATT
1921 ATCGATGTCAGAGTCTATCCATTTAAAGCTGAAGACCATTACAGGAAAGTCATGTTAAAATATTCATTGGATATGGTAAA
2001 GGAGGTACTGGTGGCTGGGCTGGAGCTTGCCGTATAGAAAAGTAATTACTTCAGATCTCATAATGTTAAATTATTGGCTT
2081 ATTTAAAAATTTCCGTGGCAGAGAGGCAAATTAGGTTTCCTCTGTGACATAACCTATTTAACCAATTTTTCAAAAAATTG
2161 TACTCTATGAGCTTTCTTGTTATAAAGCTAAAAAATTTAATTTGTCTAGGCATGTTGTAATGGTCCCAGAAAATATTACT
2241 TTGTCACTGGTGTCAGAGAAACCTCTGTCATCAGCAGATGTCCTAAGAGTATAATTATAGTTCTTTACTTAATCCAAAAT
2321 TTGTTCTGCTCTGATATCTATAAATGATATGATTATTCAAAATACCTTGAAATGATTCCACAATTAGATTAGGTCTGTTG
2401 AAGATAACTTATTCTTAAATATGAGTAAGATTAAATAAAAGTAGTTTGAGAGTTGTTACTCCCTGCCTCAACTCCATGGT
2481 ATTCCAAAATGTTTTTGTGGGCACTTTAATACTTGTAGTTTGATTTTGTTTGTTAGTTTTAGAAATGAACATTTCTTAGA
2561 TTTTCATGGGTATTTTTTGGCTGTATTTAAATGTAAATGATATAAAAGTAAGGGAAATTGTGCAAATTATTTCTTGTGTA
2641 GTAATCAGTGGAAGTGATCAAACAGCTTGAAGCAGTTTATGATGAGAAAATTTAAAATTGCAAATGACCTGAAAATTTAG
2721 CCAGTCTATTCTTATTTCTTTAAATTTCAGAAATACTTAAGAAAAAAAAAAAAAAGGTCAGTATGACCTCTGAGTTGCTT
2801 CCTAAAAGTAATCAGATAGTGTTCTCCCTCAGATAAGATTTCAAATTGAAAAGTATTTGACTTCTTTAACTCTAGTAATT
2881 GCACTTGATTCTCTAATTCTGATCATTAAAATGACTTGGCAATATTTAATTTTGGCTTGCCTTTCAATCTGCATGTTTGT
2961 CTTAAATTTAGAAAAATTAAGCTCTTTACTTACTTTTATATAAAGTATTAATTGGCCAGGCATGGTGGCTTACACCTGTA
3041 ATCCCAACACTTTGGGAGGCCAAGGCAGGAGAGTTGTTTGAAGCCAGGAGTTTGAGACCAGCCTGGGCAACATGATGAGA
3121 CCGCGTCTCTACAAAAAGTAAAATTAGCTGGGTGTGGTGCTTCCAGCTACTAGGCAGCTGAGGCTAAAGGATCACTTGAG
3201 CCCAGGAGTTCGAGGCTGCAGTGAGTGATGATCTTGCCACTGCACTCCAGCCTGGGAGGCAGAGCAAGAAACACCCTGTG
3281 TGAAAAAAGTATTGAATTTGTTTGATTCCACTTTCAAAATATGCTCTAGATACAGGTAGTCATTCTGCCAAATTGTGTTC
3361 TTCTCTAAAACATTTTGTCCGTCATTCTTTGAAACTCATTCTTAATTATTTCCACTTTACCTTCTAGTTTGGTTTGATGC
3441 CTTATATTCTTGCTAGTTAAAAGCATTTTTTCCCTAGTATTTTCTGTCTTTCTAGCCTTTAAGGCATATTGTTGTTAACA
3521 AATCTCTTATTTAAGTTAATTAAAGTTTTTTCTGTGCAGCTGGGTTTTTTCTTTTACTACATGACAAGCTTCATTTTTAC
3601 ATTTGGAAGTACATGTATATATGTTTATATATTTTTATTCTCAGGATCTATTTTCTAGGGAACTATTTTTTTAAATTATT
3681 CTTTTGTGCTGCCTTAACCCATTTATTATAGTTTGAATATTAGTAGTACTTACTACTCAAAGATTACAACTATACTAATA
3761 ACTATCCTAACATACAAAGCAGACTCTCCAGGATTAAAAGTATGAGACATATAACAGAGTCTGGAATAGAATAATTCTTT
3841 TTACCCCAGTCAAGTATTTGCCTTTTGCATTATTAAGGAATCTGTTTTGTTCTTTTATTGATAATTTCTATATTTTTTTC
3921 TTTGCCTTATTGCACTGGTTGGGACTTTTTGCCTTGATCCAGTTGTAGGGGGGAAACATTCAGTCATTAAGCATTAAATA
4001 ACTTTGTTGTTGTTGTGGGCTTGAAAAAATACCCTTTAGTAGATTGAGGGTAGACTCTTTTATTTCTGCTTGTTGGAAGT
4081 TTTCTGTCAGGAACAGATGTTGAATTTTGTCAGATGCTTTTTCTGCATAATTGATAGGACCTTTTTTCTCCCCTTTAGAA
4161 TGTTCATATGGTGAAACATACTGATAGCTTTTCTTTTCTTTTTTTTTTGACACGGAGTCTCACTCTGTCACCCAGGCTGG
4241 AGTGCAATGGTGCGATCTTGGCTCACTGCACCCTCTGCCTCTTGGGTTCAAGCTTCCCTCACCAGCCTCCCAAGTACCTG
4321 GGTATACAGGTGTGCATCACCATGCCCGGCTAATTTTTGAATTTTTAGTAGAGATAGGTTTTTACCATGTTGGCCAGGCT
4401 GGTCTTCAACTCCTGACTCAGCCTCCCAAAGTGTTGGGATTACAGTCTCGCTCTGTCGCCCAGGCTGGAGGGCAGTGGTG
4481 TGATCTTGGCTCAATGCAACCTTGCAACCTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCCTTAGCCTCCTGAGTAGCTG
4561 GAATTACAGGCGCACGCCACTACACCCAGCTTCTTTTTGTATTTTTAGTAGAGATGGAGTTTCACCATGTTGGCCAAGCT
4641 GGTCTCGAACTCCTGAGCTCCGGTGATCCACCCGCCTTTACAGGCATGAGCCACCGTGCCCGGCTGCATTTCTCTTTTGT
4721 AAGAACCTGCTCTGGTTTATTGATATTTTGCTGTTTTTCTGTTTTAAGTTTCATTAATTTCTGATCTTTAGTATTTTCTC
4801 CTTTCTTTGCTTTGGGCTTATTTGCTCCCTTTTCTAGCTTATTGTGGCGGAAGCTCAGATCATTGATTTTAAAATTTACT
4881 TATTTATTTATTTATTTATTTAATTCAACACTGATCAGAAGGCTTTTTGTGCTTTTCTAAAAAAAGCATTTAATGCTATA
4961 AATTTCCCATTTGCTTTATCTCACAAATTTTATTGTGTTGTAATTTTGTGTTCAATTTAGAATATTCTGATTTTTCTTGG
5041 TATTACTATAATTTTCAAATATTTAGAGTTTTTTTCAGTTATCTTTCTGTTACTGATTGTAATTTATTGTTTTTTAAAAT
5121 TATAGTTCTTTGAATAGTTTTGCAGTATTTGCTCTAGGGATTACTATAAACATACTTCACTTTTTACAGTTCACTTAGAA
5201 GTCAATATTTTACCAGTTCAAGTGGAATGTAGAAAAATCTTACCACTGTTTACATTCCTTTACCCTCTCCCCTTTATGTT
5281 ATAATTTTCTTATAAATCATAAGACTTGGCTGGGCACAGTGGCTCACCTGTAATCCCAGGACTGGGAGGCCGAGGCGAGC
5361 AGATTGCTTAAGTCCAGGAGTTCGAGACCAGCCTGGACAATGTGGTGAAACCCCAACTCTACAAAAAATACACAAAATTA
5441 GCTAGGCGTGGTAGCATGTTCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGGGAGGATTACTTGAGCCCAGGAGGCAG
5521 AGGTTGCAGTGAGCCAAGATCACTCCACTCCACTCCAGCCTGAGTGACAGAGCTAGACACTGTGTCTCAAAAAATAAAAA
5601 TAAAAAATAAGACTCATCAGATAATGTATTTTTTCCTTACAACTATCATAGATATTTTTAAGAACCCAAGAGGAAAACAG
5681 TCTATCACATTTACCACAATATTTATCATTTGTATTAATCTTCCTTAATTCTTGATGTTCCAAGTTTACATAGGTATCAG
5761 TCCTTTTCATCTGGAAAATTTCTTTTAGTGCAGGTCTGTTGACATTTAATTCTCTTATTTTTTCTTCATCTGAGAATGTC
5841 TTTATTTTGCCTTAATTCATGAAAGATATTTTTGCTGGATATAAACTACTGTGTTGACAGTTCTTTCAGCCTCCATGGTT
5921 TCTGATGAGAAATGTGCAGCCATTAAAGTAATATTTCCCCTGTATGAAACATGTTATTTTTCTCTGAGTATTTTCAGGAA
6001 TCTTTGTCTTTGGTTTTTATTGGTTTGATTATGATGTGCCCGGGTGTTTGAATTTATTCTCTTTGGGATTTGTTGAGCTT
6081 AAATGTGTAAGTTTATGCCTTTCATCAGATTATGTAAAGTTTTAAACCATTCAGATATTTTCTGCTCTACTTTCTCCTCC
6161 CTCTTAGGCTCCAGTGATGCAAGTGTTAGACTCTTTGGTATTATCTCACAGATCTCAGAACCTCTGTTCATTTATTTTAT
6241 TTTAATAAATCATTTCAGTTAACAAAATCATATATTGTATGCAGCATGATGTTTCAATATGTATGTTCACATTGTAGGAT
6321 GTCTAAAGTAAAGATAATGAACATAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggAGGGUGGGUGAGGGAGu 5'
            | |: :|: ||||||| 
Target 5' tcTACTTTCTCCTCCCTCt 3'
 6146 - 6164 149.00 -17.00
2 
miRNA  3' ggaggguggguGAGGGAGu 5'
                     ||||||| 
Target 5' cagatagtgttCTCCCTCa 3'
 2813 - 2831 140.00 -13.80
3 
miRNA  3' ggaGGGUGGGUGAGGGAGu 5'
             |::|::::||||||: 
Target 5' gggCTTATTTGCTCCCTTt 3'
 4814 - 4832 140.00 -17.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30508458 12 COSMIC
COSN31585784 25 COSMIC
COSN30152405 29 COSMIC
COSN30448811 55 COSMIC
COSN8865781 71 COSMIC
COSN30166249 88 COSMIC
COSN31567339 106 COSMIC
COSN31492785 111 COSMIC
COSN8601675 173 COSMIC
COSN31550677 202 COSMIC
COSN31488074 256 COSMIC
COSN30122985 266 COSMIC
COSN31609057 272 COSMIC
COSN30370966 373 COSMIC
COSN31570983 375 COSMIC
COSN26578247 572 COSMIC
COSN27199540 709 COSMIC
COSN27371385 710 COSMIC
COSN5865677 881 COSMIC
COSN8499950 1499 COSMIC
COSN19509896 1892 COSMIC
COSN25084023 1915 COSMIC
COSN9646833 2890 COSMIC
COSN14442592 3345 COSMIC
COSN5406953 3562 COSMIC
COSN25567637 3564 COSMIC
COSN6085177 3616 COSMIC
COSN1698645 3626 COSMIC
COSN20133805 3995 COSMIC
COSN25697891 4571 COSMIC
COSN8391485 4883 COSMIC
COSN5216386 4982 COSMIC
COSN16003313 5068 COSMIC
COSN21681571 5499 COSMIC
COSN1698644 6272 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs752863704 1 dbSNP
rs377742960 4 dbSNP
rs755068527 9 dbSNP
rs753874419 10 dbSNP
rs766343233 15 dbSNP
rs760506131 20 dbSNP
rs1336672144 21 dbSNP
rs773116283 23 dbSNP
rs767222337 26 dbSNP
rs1479759636 29 dbSNP
rs1304289496 31 dbSNP
rs1268848423 33 dbSNP
rs1221635135 36 dbSNP
rs1452893386 37 dbSNP
rs1270442056 38 dbSNP
rs188277260 40 dbSNP
rs981844601 41 dbSNP
rs774170179 46 dbSNP
rs1276742007 47 dbSNP
rs1221572461 49 dbSNP
rs1295547586 55 dbSNP
rs1339991430 61 dbSNP
rs969552359 65 dbSNP
rs1287400340 66 dbSNP
rs544455080 68 dbSNP
rs1452979441 69 dbSNP
rs143952575 71 dbSNP
rs1041589373 78 dbSNP
rs1447177787 92 dbSNP
rs1011498797 95 dbSNP
rs867238818 99 dbSNP
rs1010546447 101 dbSNP
rs1475992593 104 dbSNP
rs1271513974 107 dbSNP
rs1163045101 109 dbSNP
rs893498038 111 dbSNP
rs1435359481 121 dbSNP
rs28447050 122 dbSNP
rs1433076747 128 dbSNP
rs1297798688 129 dbSNP
rs556235675 141 dbSNP
rs999767422 149 dbSNP
rs113056950 150 dbSNP
rs1041613201 156 dbSNP
rs1358262351 162 dbSNP
rs529566336 166 dbSNP
rs1267174584 170 dbSNP
rs1463257464 174 dbSNP
rs1210066661 176 dbSNP
rs1261729113 186 dbSNP
rs1448107905 190 dbSNP
rs1187392090 221 dbSNP
rs1367217830 231 dbSNP
rs1476416919 242 dbSNP
rs1166100787 244 dbSNP
rs1359635103 248 dbSNP
rs1169689067 253 dbSNP
rs1455790485 255 dbSNP
rs1290717113 259 dbSNP
rs942767378 265 dbSNP
rs375842624 266 dbSNP
rs908054330 266 dbSNP
rs930951020 266 dbSNP
rs1287421673 275 dbSNP
rs1326644431 277 dbSNP
rs1240691381 295 dbSNP
rs1260821269 301 dbSNP
rs1421751189 304 dbSNP
rs1048369148 310 dbSNP
rs931287274 312 dbSNP
rs559127082 313 dbSNP
rs184173949 318 dbSNP
rs971970593 324 dbSNP
rs940590774 325 dbSNP
rs191926883 336 dbSNP
rs982366963 338 dbSNP
rs1035045803 339 dbSNP
rs1161495487 358 dbSNP
rs1203049013 359 dbSNP
rs978162001 361 dbSNP
rs1465664702 362 dbSNP
rs369621947 373 dbSNP
rs1377209631 376 dbSNP
rs1415245147 379 dbSNP
rs1023788275 381 dbSNP
rs1020117494 400 dbSNP
rs1011903353 405 dbSNP
rs1381546798 407 dbSNP
rs137975128 409 dbSNP
rs1307318206 413 dbSNP
rs1330147423 421 dbSNP
rs1230513641 422 dbSNP
rs1454336338 433 dbSNP
rs775126361 436 dbSNP
rs1379643155 453 dbSNP
rs957694807 454 dbSNP
rs1212176771 466 dbSNP
rs1274399019 468 dbSNP
rs1479891833 479 dbSNP
rs1297472634 485 dbSNP
rs561689413 491 dbSNP
rs999695042 492 dbSNP
rs995879795 495 dbSNP
rs901430867 506 dbSNP
rs1019754314 519 dbSNP
rs1396921109 519 dbSNP
rs754437321 528 dbSNP
rs1167933020 529 dbSNP
rs1040117313 556 dbSNP
rs1463397500 556 dbSNP
rs1298525095 560 dbSNP
rs940425590 561 dbSNP
rs1384651307 564 dbSNP
rs1305033639 575 dbSNP
rs1371031394 576 dbSNP
rs1226998609 578 dbSNP
rs886604938 582 dbSNP
rs1306255360 584 dbSNP
rs1383576849 588 dbSNP
rs1049263478 599 dbSNP
rs751262954 600 dbSNP
rs146251721 610 dbSNP
rs916864630 614 dbSNP
rs1424699539 615 dbSNP
rs1212001871 621 dbSNP
rs991499849 648 dbSNP
rs879061135 656 dbSNP
rs568051567 657 dbSNP
rs1454792770 662 dbSNP
rs939328575 663 dbSNP
rs1388313296 664 dbSNP
rs1007490617 665 dbSNP
rs889987692 668 dbSNP
rs1250262353 669 dbSNP
rs1430180034 673 dbSNP
rs769781530 683 dbSNP
rs1048498168 698 dbSNP
rs931423121 699 dbSNP
rs1253220336 702 dbSNP
rs978106381 706 dbSNP
rs1358139599 707 dbSNP
rs1289071462 708 dbSNP
rs1247727456 709 dbSNP
rs897117476 710 dbSNP
rs1037042311 716 dbSNP
rs1322023627 718 dbSNP
rs1317885452 719 dbSNP
rs1360495497 720 dbSNP
rs966804710 721 dbSNP
rs1321541197 722 dbSNP
rs796296239 722 dbSNP
rs957497668 722 dbSNP
rs1306004062 723 dbSNP
rs1389508126 725 dbSNP
rs539871642 727 dbSNP
rs572875931 729 dbSNP
rs745576179 731 dbSNP
rs1308588875 751 dbSNP
rs927888639 757 dbSNP
rs1363804408 760 dbSNP
rs1474127082 766 dbSNP
rs901474024 776 dbSNP
rs1344448731 792 dbSNP
rs1305115448 796 dbSNP
rs1458600028 797 dbSNP
rs549471603 801 dbSNP
rs1418138081 803 dbSNP
rs947868406 810 dbSNP
rs1317992437 823 dbSNP
rs1157338491 826 dbSNP
rs1421281887 831 dbSNP
rs1018662380 840 dbSNP
rs1004627949 850 dbSNP
rs1379072188 852 dbSNP
rs916451324 854 dbSNP
rs1295441523 865 dbSNP
rs1335738125 883 dbSNP
rs1199349735 887 dbSNP
rs1282273906 891 dbSNP
rs1318863097 891 dbSNP
rs1216552488 892 dbSNP
rs531453398 898 dbSNP
rs1236902242 899 dbSNP
rs1484616006 919 dbSNP
rs1189801652 920 dbSNP
rs886218728 921 dbSNP
rs1257917250 929 dbSNP
rs1472072481 932 dbSNP
rs1156492302 948 dbSNP
rs571029640 954 dbSNP
rs762155090 959 dbSNP
rs1174726038 962 dbSNP
rs1266149614 964 dbSNP
rs1433334572 972 dbSNP
rs185249120 976 dbSNP
rs1356453110 981 dbSNP
rs1409578652 984 dbSNP
rs1488589077 990 dbSNP
rs1278043010 995 dbSNP
rs375569857 1000 dbSNP
rs1375796836 1001 dbSNP
rs1259821097 1009 dbSNP
rs754221092 1015 dbSNP
rs1330976204 1019 dbSNP
rs923576467 1027 dbSNP
rs551835558 1041 dbSNP
rs1288844194 1045 dbSNP
rs965636489 1047 dbSNP
rs1343633485 1054 dbSNP
rs201924647 1056 dbSNP
rs1482626880 1061 dbSNP
rs1179386685 1068 dbSNP
rs527519265 1077 dbSNP
rs1055350140 1083 dbSNP
rs868117108 1085 dbSNP
rs1305010686 1096 dbSNP
rs1234309045 1098 dbSNP
rs939607095 1099 dbSNP
rs559910806 1100 dbSNP
rs1190129992 1105 dbSNP
rs1392684034 1111 dbSNP
rs1020269508 1134 dbSNP
rs1007174483 1135 dbSNP
rs954350759 1136 dbSNP
rs1027156925 1144 dbSNP
rs995557006 1150 dbSNP
rs927964952 1154 dbSNP
rs897256080 1162 dbSNP
rs1037010891 1167 dbSNP
rs182209947 1179 dbSNP
rs907230134 1180 dbSNP
rs1327255096 1183 dbSNP
rs1356496627 1184 dbSNP
rs1443151977 1186 dbSNP
rs1274358926 1195 dbSNP
rs529903039 1205 dbSNP
rs1389853168 1206 dbSNP
rs1193867501 1208 dbSNP
rs1304151970 1208 dbSNP
rs1046735866 1211 dbSNP
rs945448179 1214 dbSNP
rs1176245832 1216 dbSNP
rs200736656 1217 dbSNP
rs1432141333 1218 dbSNP
rs1200330976 1221 dbSNP
rs1433293650 1222 dbSNP
rs948037001 1228 dbSNP
rs916377105 1232 dbSNP
rs1455225924 1242 dbSNP
rs1193709974 1249 dbSNP
rs1053560283 1250 dbSNP
rs915351932 1265 dbSNP
rs936396715 1266 dbSNP
rs1466035531 1270 dbSNP
rs1268521149 1273 dbSNP
rs1422033596 1279 dbSNP
rs764310509 1280 dbSNP
rs923712747 1283 dbSNP
rs977836762 1294 dbSNP
rs1276579343 1295 dbSNP
rs1443268809 1295 dbSNP
rs1325794414 1320 dbSNP
rs1271742041 1322 dbSNP
rs1233997967 1324 dbSNP
rs1325946195 1325 dbSNP
rs1270958094 1326 dbSNP
rs557922730 1326 dbSNP
rs974656712 1329 dbSNP
rs1246831176 1330 dbSNP
rs965406301 1332 dbSNP
rs1191728374 1333 dbSNP
rs912267013 1338 dbSNP
rs1244303899 1340 dbSNP
rs986075608 1343 dbSNP
rs1475981971 1349 dbSNP
rs1164638796 1365 dbSNP
rs1415970472 1377 dbSNP
rs1463146958 1380 dbSNP
rs544252555 1381 dbSNP
rs1165793344 1383 dbSNP
rs1384287447 1387 dbSNP
rs1380584901 1388 dbSNP
rs1320259925 1389 dbSNP
rs1018609851 1391 dbSNP
rs1326950317 1391 dbSNP
rs954325947 1393 dbSNP
rs577146528 1395 dbSNP
rs1027125553 1397 dbSNP
rs1291150586 1398 dbSNP
rs995691420 1401 dbSNP
rs1366276500 1415 dbSNP
rs1233467631 1429 dbSNP
rs1336455594 1431 dbSNP
rs1347973572 1432 dbSNP
rs1206372388 1442 dbSNP
rs1264547716 1443 dbSNP
rs961561330 1449 dbSNP
rs1027380648 1450 dbSNP
rs1255803621 1453 dbSNP
rs1173692607 1454 dbSNP
rs995004334 1458 dbSNP
rs546013661 1468 dbSNP
rs1363411223 1475 dbSNP
rs1372002429 1476 dbSNP
rs1451803288 1479 dbSNP
rs1160360515 1484 dbSNP
rs1190482108 1484 dbSNP
rs1236340989 1489 dbSNP
rs1015673186 1493 dbSNP
rs575557308 1494 dbSNP
rs1433954210 1496 dbSNP
rs1002993969 1503 dbSNP
rs907195249 1505 dbSNP
rs1357187031 1514 dbSNP
rs1415136476 1515 dbSNP
rs1044406582 1526 dbSNP
rs1055257408 1527 dbSNP
rs1182708137 1537 dbSNP
rs1459831889 1552 dbSNP
rs1280577414 1553 dbSNP
rs1210738682 1557 dbSNP
rs141715160 1559 dbSNP
rs1486882983 1560 dbSNP
rs1003740956 1563 dbSNP
rs540720197 1564 dbSNP
rs1338746307 1567 dbSNP
rs906820125 1569 dbSNP
rs1249679703 1570 dbSNP
rs895082445 1571 dbSNP
rs1184086249 1572 dbSNP
rs76453599 1580 dbSNP
rs397693805 1581 dbSNP
rs945354975 1581 dbSNP
rs1171730425 1585 dbSNP
rs201980368 1586 dbSNP
rs35608486 1592 dbSNP
rs369317995 1592 dbSNP
rs1392729430 1593 dbSNP
rs1231403780 1594 dbSNP
rs1307116689 1594 dbSNP
rs1450844332 1601 dbSNP
rs1301974204 1605 dbSNP
rs1350664940 1607 dbSNP
rs915240955 1613 dbSNP
rs1053840151 1632 dbSNP
rs1479799996 1633 dbSNP
rs1342647825 1657 dbSNP
rs1335363512 1667 dbSNP
rs1053529073 1668 dbSNP
rs138767914 1678 dbSNP
rs1396824296 1685 dbSNP
rs144843322 1691 dbSNP
rs776455885 1705 dbSNP
rs1042526097 1708 dbSNP
rs1165628881 1720 dbSNP
rs943803363 1723 dbSNP
rs776088545 1728 dbSNP
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rs950382287 1748 dbSNP
rs1327263301 1759 dbSNP
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rs961531066 1774 dbSNP
rs1373836076 1805 dbSNP
rs1027738115 1806 dbSNP
rs994592270 1807 dbSNP
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rs1003688433 1823 dbSNP
rs1442478942 1828 dbSNP
rs1238986648 1833 dbSNP
rs981895573 1852 dbSNP
rs1188070919 1853 dbSNP
rs1185911958 1858 dbSNP
rs536954863 1859 dbSNP
rs1042590034 1860 dbSNP
rs1416740097 1862 dbSNP
rs1023359946 1865 dbSNP
rs1342987771 1868 dbSNP
rs575814260 1868 dbSNP
rs1394516639 1880 dbSNP
rs1012939034 1893 dbSNP
rs189553095 1897 dbSNP
rs758807618 1902 dbSNP
rs1384285257 1904 dbSNP
rs568279703 1905 dbSNP
rs762131396 1905 dbSNP
rs1334478540 1906 dbSNP
rs899938871 1907 dbSNP
rs1032209683 1923 dbSNP
rs10492855 1924 dbSNP
rs1322449849 1927 dbSNP
rs902313476 1929 dbSNP
rs911737716 1943 dbSNP
rs1238842542 1952 dbSNP
rs140449159 1957 dbSNP
rs1256496554 1960 dbSNP
rs1474035987 1964 dbSNP
rs570413857 1972 dbSNP
rs1414060144 1984 dbSNP
rs1411069757 1997 dbSNP
rs116196832 2005 dbSNP
rs1343949409 2006 dbSNP
rs1455768819 2008 dbSNP
rs1302064401 2011 dbSNP
rs1403234589 2014 dbSNP
rs1049964928 2019 dbSNP
rs1295422384 2021 dbSNP
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rs146447463 5642 dbSNP
rs1343599512 5645 dbSNP
rs1392398721 5652 dbSNP
rs1013564242 5665 dbSNP
rs1455435354 5672 dbSNP
rs1289486050 5679 dbSNP
rs369229227 5680 dbSNP
rs1023126679 5682 dbSNP
rs36481 5684 dbSNP
rs1035536904 5687 dbSNP
rs896083562 5699 dbSNP
rs1001408691 5705 dbSNP
rs533387915 5706 dbSNP
rs1031653287 5731 dbSNP
rs999238806 5737 dbSNP
rs1042903023 5752 dbSNP
rs530720074 5756 dbSNP
rs72018856 5756 dbSNP
rs947109634 5761 dbSNP
rs1215922743 5788 dbSNP
rs559516713 5791 dbSNP
rs1254940184 5793 dbSNP
rs891565102 5798 dbSNP
rs1202388270 5812 dbSNP
rs1459572433 5812 dbSNP
rs1245440944 5815 dbSNP
rs1443658556 5818 dbSNP
rs1280521614 5824 dbSNP
rs185149145 5827 dbSNP
rs547687729 5828 dbSNP
rs1406106592 5841 dbSNP
rs922936467 5844 dbSNP
rs191882369 5854 dbSNP
rs1160077097 5865 dbSNP
rs1049619901 5874 dbSNP
rs933880177 5879 dbSNP
rs1468295757 5883 dbSNP
rs1338626980 5890 dbSNP
rs1406652604 5891 dbSNP
rs1299518642 5894 dbSNP
rs922489666 5911 dbSNP
rs1378287100 5912 dbSNP
rs1375212059 5913 dbSNP
rs1224037604 5939 dbSNP
rs1300148956 5952 dbSNP
rs1320877711 5954 dbSNP
rs1036966320 5955 dbSNP
rs1265569465 5960 dbSNP
rs201157385 5962 dbSNP
rs1204407926 5964 dbSNP
rs1231577332 5965 dbSNP
rs909550812 5971 dbSNP
rs1481816380 5973 dbSNP
rs1178064562 5984 dbSNP
rs1428774390 5986 dbSNP
rs983830410 5986 dbSNP
rs974990640 5993 dbSNP
rs969812360 6005 dbSNP
rs1429944133 6006 dbSNP
rs1409340970 6010 dbSNP
rs755546604 6011 dbSNP
rs1450216022 6018 dbSNP
rs1376136367 6034 dbSNP
rs916064935 6038 dbSNP
rs909368157 6041 dbSNP
rs1307557876 6042 dbSNP
rs1442654471 6045 dbSNP
rs1428035723 6046 dbSNP
rs992978980 6058 dbSNP
rs1406280196 6061 dbSNP
rs1372681555 6075 dbSNP
rs1416046822 6080 dbSNP
rs1171520523 6085 dbSNP
rs984981891 6091 dbSNP
rs1423623998 6113 dbSNP
rs1412191616 6117 dbSNP
rs1205592520 6119 dbSNP
rs1268471592 6126 dbSNP
rs62057594 6128 dbSNP
rs1475859778 6134 dbSNP
rs919319955 6138 dbSNP
rs560738043 6146 dbSNP
rs1032311162 6154 dbSNP
rs1475115884 6156 dbSNP
rs1203876929 6159 dbSNP
rs1166154807 6164 dbSNP
rs762921392 6169 dbSNP
rs999125149 6172 dbSNP
rs1410349688 6177 dbSNP
rs992659401 6178 dbSNP
rs773525687 6179 dbSNP
rs1363454620 6183 dbSNP
rs960699967 6191 dbSNP
rs569305682 6204 dbSNP
rs969120411 6205 dbSNP
rs1426219725 6212 dbSNP
rs141759259 6214 dbSNP
rs1427961884 6219 dbSNP
rs1001397266 6228 dbSNP
rs1268945460 6232 dbSNP
rs1204884817 6234 dbSNP
rs1320892615 6245 dbSNP
rs1287547580 6250 dbSNP
rs144436509 6251 dbSNP
rs1356062950 6266 dbSNP
rs1357709998 6268 dbSNP
rs1287766823 6270 dbSNP
rs1292770110 6271 dbSNP
rs770774008 6273 dbSNP
rs866485799 6276 dbSNP
rs1051868759 6288 dbSNP
rs1243810446 6290 dbSNP
rs1475725837 6291 dbSNP
rs1021392647 6298 dbSNP
rs1383214789 6299 dbSNP
rs75750360 6301 dbSNP
rs1383725551 6303 dbSNP
rs1298978983 6304 dbSNP
rs1457664847 6311 dbSNP
rs1345235647 6325 dbSNP
rs1436525771 6334 dbSNP
rs746646486 6336 dbSNP
rs545118176 6339 dbSNP
rs773189062 6339 dbSNP
rs1167424089 6346 dbSNP
rs997715750 6346 dbSNP
rs1037319785 6350 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ggagGGUGGGUGAGGGAGu 5'
              :||  | :|||||| 
Target 5' ----UCAAGC-UUCCCUCa 3'
 		1 - 14
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000394806.2 | 3UTR | UCAAGCUUCCCUCACCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
224 hsa-miR-6127 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT083286 ZCCHC3 zinc finger CCHC-type containing 3 2 6
MIRT113617 ATXN7L3B ataxin 7 like 3B 2 2
MIRT134910 CCND2 cyclin D2 2 2
MIRT177172 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT179548 CAPZA1 capping actin protein of muscle Z-line alpha subunit 1 2 2
MIRT180881 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT197052 NKIRAS2 NFKB inhibitor interacting Ras like 2 2 2
MIRT197845 DCAF7 DDB1 and CUL4 associated factor 7 2 2
MIRT267391 TMEM138 transmembrane protein 138 2 2
MIRT312620 G3BP1 G3BP stress granule assembly factor 1 2 2
MIRT350379 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT366859 ZXDB zinc finger, X-linked, duplicated B 2 4
MIRT374545 AK2 adenylate kinase 2 2 2
MIRT402072 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT442348 RAB6B RAB6B, member RAS oncogene family 2 2
MIRT442506 OSBP oxysterol binding protein 2 2
MIRT443823 SH3BP5L SH3 binding domain protein 5 like 2 2
MIRT444970 CDH7 cadherin 7 2 2
MIRT445064 C16orf87 chromosome 16 open reading frame 87 2 2
MIRT445323 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT446216 SLC25A44 solute carrier family 25 member 44 2 2
MIRT448107 TCN2 transcobalamin 2 2 2
MIRT448289 ZDHHC3 zinc finger DHHC-type containing 3 2 2
MIRT450258 MED30 mediator complex subunit 30 2 2
MIRT451022 MYH14 myosin heavy chain 14 2 8
MIRT451425 TJP3 tight junction protein 3 2 4
MIRT451930 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT452000 FKBP5 FK506 binding protein 5 2 2
MIRT452359 DLX6 distal-less homeobox 6 2 8
MIRT452462 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT453119 HOXC4 homeobox C4 2 2
MIRT453342 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT453485 PITPNM3 PITPNM family member 3 2 2
MIRT453520 C14orf144 chromosome 14 open reading frame 144 2 2
MIRT453553 PRR12 proline rich 12 2 2
MIRT454220 HLA-A major histocompatibility complex, class I, A 2 2
MIRT454302 ZNF134 zinc finger protein 134 2 2
MIRT454394 NRG4 neuregulin 4 2 2
MIRT454486 SLC29A1 solute carrier family 29 member 1 (Augustine blood group) 2 2
MIRT454695 KIAA1644 KIAA1644 2 2
MIRT454955 TPM2 tropomyosin 2 2 2
MIRT455021 UBA1 ubiquitin like modifier activating enzyme 1 2 2
MIRT455137 TBC1D25 TBC1 domain family member 25 2 2
MIRT455294 BCL2L1 BCL2 like 1 2 2
MIRT456535 TMEM63A transmembrane protein 63A 2 2
MIRT457109 DCX doublecortin 2 2
MIRT457438 NOL10 nucleolar protein 10 2 2
MIRT457774 ZC3H12B zinc finger CCCH-type containing 12B 2 4
MIRT458605 KCTD2 potassium channel tetramerization domain containing 2 2 2
MIRT459452 TMEM37 transmembrane protein 37 2 2
MIRT459580 NLGN2 neuroligin 2 2 2
MIRT459929 HHIP hedgehog interacting protein 2 8
MIRT460150 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460659 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460693 RNF157 ring finger protein 157 2 2
MIRT460892 UBE2S ubiquitin conjugating enzyme E2 S 2 2
MIRT461550 ACTR3B ARP3 actin related protein 3 homolog B 2 6
MIRT462035 FAAH fatty acid amide hydrolase 2 2
MIRT462460 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT462806 NTN1 netrin 1 2 2
MIRT463002 ZNF740 zinc finger protein 740 2 2
MIRT463920 WNT3 Wnt family member 3 2 2
MIRT464597 UBN2 ubinuclein 2 2 2
MIRT464656 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 4
MIRT464999 TUBB2A tubulin beta 2A class IIa 2 10
MIRT465022 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT465368 TPM3 tropomyosin 3 2 6
MIRT465426 TP53 tumor protein p53 2 2
MIRT465919 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 4
MIRT465999 TMEM189 transmembrane protein 189 2 4
MIRT467355 SP2 Sp2 transcription factor 2 2
MIRT467775 SLC2A4 solute carrier family 2 member 4 2 2
MIRT467883 SLC22A23 solute carrier family 22 member 23 2 2
MIRT468303 SFT2D2 SFT2 domain containing 2 2 2
MIRT469153 RNF121 ring finger protein 121 2 2
MIRT469170 RNF111 ring finger protein 111 2 2
MIRT469568 RARA retinoic acid receptor alpha 2 2
MIRT469677 RAB5B RAB5B, member RAS oncogene family 2 4
MIRT470152 PSME3 proteasome activator subunit 3 2 2
MIRT470176 PSMD11 proteasome 26S subunit, non-ATPase 11 2 4
MIRT470780 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT471536 PAX5 paired box 5 2 2
MIRT472072 NOVA2 NOVA alternative splicing regulator 2 2 2
MIRT472186 NHP2L1 small nuclear ribonucleoprotein 13 2 2
MIRT472303 NFAT5 nuclear factor of activated T-cells 5 2 2
MIRT472701 MYBL1 MYB proto-oncogene like 1 2 2
MIRT473108 MLXIP MLX interacting protein 2 2
MIRT474786 KIAA0895L KIAA0895 like 2 2
MIRT475143 IP6K1 inositol hexakisphosphate kinase 1 2 2
MIRT475216 IL2RB interleukin 2 receptor subunit beta 2 2
MIRT475441 HYOU1 hypoxia up-regulated 1 2 2
MIRT475636 HMGA1 high mobility group AT-hook 1 2 2
MIRT475767 HDLBP high density lipoprotein binding protein 2 2
MIRT476091 GRB2 growth factor receptor bound protein 2 2 2
MIRT476509 GATAD2A GATA zinc finger domain containing 2A 2 2
MIRT477048 FAM210A family with sequence similarity 210 member A 2 2
MIRT477390 ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 2 2
MIRT477416 EN2 engrailed homeobox 2 2 2
MIRT478602 CTDSP2 CTD small phosphatase 2 2 2
MIRT478893 CREB3L2 cAMP responsive element binding protein 3 like 2 2 4
MIRT479128 CNBP CCHC-type zinc finger nucleic acid binding protein 2 4
MIRT479246 CHTF8 chromosome transmission fidelity factor 8 2 2
MIRT482311 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT482774 ANKHD1-EIF4EBP3 ANKHD1-EIF4EBP3 readthrough 2 4
MIRT482822 TRAF6 TNF receptor associated factor 6 2 2
MIRT483320 SLC35C2 solute carrier family 35 member C2 2 4
MIRT483343 CHRDL1 chordin like 1 2 8
MIRT483447 ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor 6 2 6
MIRT483630 NAV2 neuron navigator 2 2 2
MIRT484076 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 4
MIRT484100 EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 2 4
MIRT484219 SUMO1 small ubiquitin-like modifier 1 2 6
MIRT484291 AIP aryl hydrocarbon receptor interacting protein 2 4
MIRT484368 GATA6 GATA binding protein 6 2 12
MIRT484388 ZNF710 zinc finger protein 710 2 4
MIRT484440 RAB7A RAB7A, member RAS oncogene family 2 4
MIRT484586 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT484620 SIX3 SIX homeobox 3 2 6
MIRT484854 ZNF70 zinc finger protein 70 2 4
MIRT485005 TNRC6B trinucleotide repeat containing 6B 2 4
MIRT485837 ARF3 ADP ribosylation factor 3 2 2
MIRT486164 TLE3 transducin like enhancer of split 3 2 2
MIRT486440 NDUFA5 NADH:ubiquinone oxidoreductase subunit A5 2 2
MIRT486578 ZNF619 zinc finger protein 619 2 2
MIRT486636 GFRA1 GDNF family receptor alpha 1 2 2
MIRT486696 GLYR1 glyoxylate reductase 1 homolog 2 2
MIRT486799 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT486870 DPF1 double PHD fingers 1 2 2
MIRT486904 TSPYL4 TSPY like 4 2 4
MIRT487053 C10orf55 chromosome 10 open reading frame 55 2 2
MIRT487141 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487247 KHSRP KH-type splicing regulatory protein 2 2
MIRT487618 C20orf96 chromosome 20 open reading frame 96 2 2
MIRT487705 CDK14 cyclin dependent kinase 14 2 2
MIRT487842 CLSTN1 calsyntenin 1 2 4
MIRT487915 FBXO44 F-box protein 44 2 2
MIRT487965 IQSEC2 IQ motif and Sec7 domain 2 2 2
MIRT488131 GPR107 G protein-coupled receptor 107 2 2
MIRT488200 MAT1A methionine adenosyltransferase 1A 2 2
MIRT488247 DNLZ DNL-type zinc finger 2 4
MIRT488518 CD3E CD3e molecule 2 2
MIRT488889 ASTN2 astrotactin 2 2 4
MIRT488981 REXO2 RNA exonuclease 2 2 2
MIRT489063 STARD3 StAR related lipid transfer domain containing 3 2 2
MIRT489125 PPFIA3 PTPRF interacting protein alpha 3 2 2
MIRT489539 MRE11A MRE11 homolog, double strand break repair nuclease 2 14
MIRT489628 ALS2CL ALS2 C-terminal like 2 2
MIRT489861 ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 2 2
MIRT490305 HOXB13 homeobox B13 2 2
MIRT490664 NKD1 naked cuticle homolog 1 2 6
MIRT490760 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT490839 ADD2 adducin 2 2 2
MIRT491236 KCNA5 potassium voltage-gated channel subfamily A member 5 2 2
MIRT491450 HOXB5 homeobox B5 2 2
MIRT491562 YAE1D1 Yae1 domain containing 1 2 2
MIRT491827 ZBTB7B zinc finger and BTB domain containing 7B 2 2
MIRT492800 PDE4A phosphodiesterase 4A 2 4
MIRT492887 NFIX nuclear factor I X 2 4
MIRT493404 KIAA0513 KIAA0513 2 2
MIRT493682 HAP1 huntingtin associated protein 1 2 2
MIRT493945 EPB41L1 erythrocyte membrane protein band 4.1 like 1 2 2
MIRT494042 DUSP7 dual specificity phosphatase 7 2 4
MIRT494183 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 2
MIRT494713 ARHGAP31 Rho GTPase activating protein 31 2 2
MIRT494903 UCP2 uncoupling protein 2 2 2
MIRT496600 TAGLN transgelin 2 2
MIRT497050 DYRK1B dual specificity tyrosine phosphorylation regulated kinase 1B 2 2
MIRT497289 TMEM119 transmembrane protein 119 2 2
MIRT498945 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT499011 CCDC50 coiled-coil domain containing 50 2 2
MIRT499027 MAG myelin associated glycoprotein 2 2
MIRT499525 SBK1 SH3 domain binding kinase 1 2 6
MIRT499568 CCDC88A coiled-coil domain containing 88A 2 2
MIRT499810 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT500176 CHRM3 cholinergic receptor muscarinic 3 2 2
MIRT502241 HOXC6 homeobox C6 2 2
MIRT502323 GIGYF1 GRB10 interacting GYF protein 1 2 4
MIRT503638 POLR2F RNA polymerase II subunit F 2 4
MIRT510642 TMEM167A transmembrane protein 167A 2 4
MIRT511034 NRF1 nuclear respiratory factor 1 2 2
MIRT512917 UBL4A ubiquitin like 4A 2 2
MIRT520184 WBP2 WW domain binding protein 2 2 2
MIRT527099 VSTM5 V-set and transmembrane domain containing 5 2 2
MIRT529299 AGK acylglycerol kinase 2 2
MIRT532910 ZNF385A zinc finger protein 385A 2 2
MIRT537881 EDA2R ectodysplasin A2 receptor 2 2
MIRT543762 UBXN2B UBX domain protein 2B 2 2
MIRT546668 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT550080 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT560282 HRH2 histamine receptor H2 2 2
MIRT560778 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT564299 MED26 mediator complex subunit 26 2 2
MIRT568820 TRIM67 tripartite motif containing 67 2 2
MIRT568907 ATP6V1B1 ATPase H+ transporting V1 subunit B1 2 2
MIRT569193 LRRC3C leucine rich repeat containing 3C 2 2
MIRT569696 FMNL3 formin like 3 2 2
MIRT569735 GPR173 G protein-coupled receptor 173 2 2
MIRT569775 SAMD14 sterile alpha motif domain containing 14 2 2
MIRT570218 SLC27A1 solute carrier family 27 member 1 2 2
MIRT570313 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT570536 RPH3A rabphilin 3A 2 2
MIRT570580 OTUD7B OTU deubiquitinase 7B 2 2
MIRT571304 TPCN2 two pore segment channel 2 2 2
MIRT571584 TOB2 transducer of ERBB2, 2 2 2
MIRT573278 NCAPH non-SMC condensin I complex subunit H 2 2
MIRT573669 HES6 hes family bHLH transcription factor 6 2 2
MIRT574435 SLC7A5 solute carrier family 7 member 5 2 2
MIRT608005 BTBD9 BTB domain containing 9 2 2
MIRT621341 SLC11A1 solute carrier family 11 member 1 2 2
MIRT636387 NAV1 neuron navigator 1 2 4
MIRT645810 OMA1 OMA1 zinc metallopeptidase 2 2
MIRT649925 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT654189 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT661224 SCIMP SLP adaptor and CSK interacting membrane protein 2 2
MIRT661448 MORC4 MORC family CW-type zinc finger 4 2 2
MIRT683122 MED28 mediator complex subunit 28 2 2
MIRT688013 GSN gelsolin 2 2
MIRT702788 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT710928 ING5 inhibitor of growth family member 5 2 2
MIRT713049 IFRD1 interferon related developmental regulator 1 2 2
MIRT713581 SLC2A8 solute carrier family 2 member 8 2 2
MIRT714786 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT719787 PRDM12 PR/SET domain 12 2 2
MIRT722678 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6127 Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-6127 Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-6127 Temozolomide 5394 NSC362856 approved resistant cell line (U251)
hsa-miR-6127 Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-6127 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-6127 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-6127 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)

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