miRTarBase - #MIRT445340


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pre-miRNA Information
pre-miRNA hsa-mir-3915   
Genomic Coordinates chrX: 32583656 - 32583752
Description Homo sapiens miR-3915 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3915
Sequence 21| UUGAGGAAAAGAUGGUCUUAUU |42
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs997323565 10 dbSNP
rs1192161547 15 dbSNP
rs1255075246 19 dbSNP
rs1452812574 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TCEANC   
Synonyms -
Description transcription elongation factor A N-terminal and central domain containing
Transcript NM_152634   
Expression
Putative miRNA Targets on TCEANC
3'UTR of TCEANC
(miRNA target sites are highlighted)		 
>TCEANC|NM_152634|3'UTR
   1 CTGTAAATCAGTGTTCTCTTAACAGATAACCGGAGTGATACCTTTTATTTGTACAACCCTTTTGTGCTTTTAAAAATCTT
  81 ATACACACTACTCTCTAAAACAGAAAAAGGAGGAAAGAAAGTCGTTAGCTGAAGCTGCCACCACCATCCCTAAAAGTTAC
 161 AGTTTGGGGAGAGGGAGTGGATGACTATTTATATTGTGCCTTGTGGCCATTTAGTACCTTACTGTAGACAGAGTGTGGGT
 241 GAGAACAGCCCAGCATAAACTGGGAGACTGTGGGAAATGCATTCCCAGGCCTCACACCATTGAATCCGAATCTGCATTTT
 321 GACAGGATCCCCAGGTAATCTTCCAGGATAGGATAGTTTGAGAAGTGCTACTTTAGCAATAGGCCTGTGGCTCTCAGCAG
 401 TGGCTGCATATTAAAATCATCTGGGAAGCTTTGAAAACCCACTGGTGCTGAGACCCCACCCTAGAACAATTCAGTTGGAA
 481 CCTATGAGATGGGACCCAGGCATCAACATTTCTTTTTTCATTCCTCAAGTTATTTTAAGATGCAGTCAGAGTTGAGAACT
 561 ACTCAGAAATAGGCTCTCATTTGATCCTTTTTACAGCTCTAAGACAAGAATGTTATTCCAGGCACTTCACGAATGAGGAA
 641 ACAGGTCCACAGAGGTGTGGTGACATGTCCAAGTGACACAACCATAAATAGTACCAATTCTGACAGATCCCAGATTTTCT
 721 CCCTCCTGACTCACTGAGACTGGCTCAATATCGACTTCTGAGAAATGTATTCCTGGAGGTCGGGGACAAAATGAAGAATG
 801 TGTTTAAACTCCAACATTGGGTGACTAGATCTTCATTCTTTTCCCCTCTCTTTTCTCATTTATAGGTCTCCCTTCAACCA
 881 CAAAAGTCACCCTGGAACTCATCCCGCAGTTAGAATTTTGTTTGGAGCCCTCTTGCTTAGTTGAAGGAGTTTCGTAGTTG
 961 TTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTCCCCCTGTGAACAGGTTTTTCGGGGGTATGTAAACTCTAGGATGTTTAG
1041 TTTCTGATGTCAGGAGTCTTCATGTTCTCAAGGACAAGTGTCCTTGAGATGGACATTAATGGTCATTAGTCTGTCAGAGG
1121 AAGCCCATCACTTTAGCCTTTGAATGTAGTAACAGACGTTTATCTAATAAATGAATTGAAGATAAAATTACCTCTTTGAG
1201 GCCTTTGCAAACAGTGTTTAACCAGTTTATATAATTGTTTGACTACAACACGCCTTCTATGTGATTATGGCTGATTTTTT
1281 TTCCTTAAAAAACTCATGGAATGTTCACCGTTTTATAGTTTTAAAAAGTTTACTTTGGCGGTCTCTACAAACCTACCATT
1361 TCACTTTCTCACCAGTTCTTTTCTCCTAACTCTCTTCCTTTGTTGGAGCTCTGAAGGCCTAACTGTGTGTACACTTTACC
1441 TGCCTGACAGAATTCTCCAAAACATGCATAAAAGTAAAATATGTTCGTATTTTCAAATAATTTGGAAGAGTCGGCTCAAT
1521 GCCATCAAGTGTAAAATCTATTTTGATATACTTGCTCTCCGTGTCTTCCCAGGGCTGCTTTTTGTGATGCAACATGTTTA
1601 GTCCTTAACTTGCAAGGTCATCTAAAACTTGAAGTTTCACAAAGTGTGGTTTCATATGACTTGGAATAATCTGAAAAACT
1681 ATTCAGTGGTTACGAAAGAGCACAGCACATAAAAACCAAATTTGATTAGTTCAAGTCGGTGTTTATGTTTTGCTTTGGGG
1761 GTTTGTGTGTATGTGTGTAGTTTTTATTTATATTGGAATTTGGCAAACTAAATGTTCAGACAAATAAAAGTAATTAAAAT
1841 GGAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuauucuGGUAGAA--AAGGAGUu 5'
                 |: |:||  ||||||| 
Target 5' aacatttCTTTTTTCATTCCTCAa 3'
 505 - 528 149.00 -10.00
2 
miRNA  3' uuAUUCUGGU---AGAAAAGGAGUu 5'
            || |:|::   |:|||||||:| 
Target 5' atTATGGCTGATTTTTTTTCCTTAa 3'
 1264 - 1288 148.00 -11.90
3 
miRNA  3' uuauucuGGUAGA-AAAGGAGUu 5'
                 || ||| |||:|||| 
Target 5' tcttttcCCCTCTCTTTTCTCAt 3'
 837 - 859 143.00 -10.20
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1375015758 1 dbSNP
rs1462627096 2 dbSNP
rs61746350 3 dbSNP
rs1032130523 4 dbSNP
rs1168348732 8 dbSNP
rs761227453 10 dbSNP
rs1419447950 12 dbSNP
rs1240005700 15 dbSNP
rs768223453 25 dbSNP
rs775989585 32 dbSNP
rs191199193 33 dbSNP
rs948312292 36 dbSNP
rs1343190412 39 dbSNP
rs764761762 46 dbSNP
rs750266326 50 dbSNP
rs1227690020 51 dbSNP
rs750916352 56 dbSNP
rs1255627486 59 dbSNP
rs756722111 64 dbSNP
rs780220184 65 dbSNP
rs1045329433 76 dbSNP
rs955596588 79 dbSNP
rs1446651585 82 dbSNP
rs769426579 83 dbSNP
rs1203273715 96 dbSNP
rs182573638 106 dbSNP
rs1465330400 111 dbSNP
rs1397235433 115 dbSNP
rs1190239157 121 dbSNP
rs1171626230 124 dbSNP
rs772917209 125 dbSNP
rs931528320 146 dbSNP
rs1047573319 150 dbSNP
rs1438951458 155 dbSNP
rs1243649037 182 dbSNP
rs887211417 188 dbSNP
rs1440762355 193 dbSNP
rs1255755011 195 dbSNP
rs1008610778 201 dbSNP
rs1164356603 205 dbSNP
rs143017839 214 dbSNP
rs1019613497 218 dbSNP
rs1239846251 234 dbSNP
rs964050657 241 dbSNP
rs1286464302 242 dbSNP
rs1459537600 247 dbSNP
rs1449657813 250 dbSNP
rs1338129436 253 dbSNP
rs1333097315 260 dbSNP
rs899873048 264 dbSNP
rs778592575 269 dbSNP
rs996756308 275 dbSNP
rs1157290399 281 dbSNP
rs1296161520 282 dbSNP
rs1418865137 286 dbSNP
rs372320952 289 dbSNP
rs747846861 301 dbSNP
rs1436512785 303 dbSNP
rs146123445 308 dbSNP
rs777294782 309 dbSNP
rs1489423089 310 dbSNP
rs1261260318 317 dbSNP
rs930059508 322 dbSNP
rs1383333864 330 dbSNP
rs746880740 348 dbSNP
rs1490611561 365 dbSNP
rs917762029 371 dbSNP
rs1227035060 375 dbSNP
rs5935651 384 dbSNP
rs1313028665 394 dbSNP
rs1045036001 406 dbSNP
rs1283035395 414 dbSNP
rs1031811211 424 dbSNP
rs904856621 427 dbSNP
rs1000494438 430 dbSNP
rs776492911 441 dbSNP
rs1329775109 442 dbSNP
rs774540018 443 dbSNP
rs915575523 446 dbSNP
rs1009747850 450 dbSNP
rs759371162 468 dbSNP
rs1020431596 469 dbSNP
rs1171523568 475 dbSNP
rs74929901 476 dbSNP
rs78932043 477 dbSNP
rs767852349 484 dbSNP
rs1421830030 491 dbSNP
rs776067162 501 dbSNP
rs920204070 509 dbSNP
rs1018522999 517 dbSNP
rs1460707148 527 dbSNP
rs1259265041 529 dbSNP
rs769518035 530 dbSNP
rs761236049 533 dbSNP
rs974068182 544 dbSNP
rs1425831367 548 dbSNP
rs1217590454 555 dbSNP
rs919935063 563 dbSNP
rs149387329 566 dbSNP
rs887150354 588 dbSNP
rs762153387 609 dbSNP
rs1331939345 613 dbSNP
rs767666912 631 dbSNP
rs773432976 632 dbSNP
rs760891915 635 dbSNP
rs1162009155 656 dbSNP
rs1415204365 668 dbSNP
rs766902636 677 dbSNP
rs757436256 694 dbSNP
rs996872676 697 dbSNP
rs1044922361 710 dbSNP
rs1239337469 722 dbSNP
rs769964170 726 dbSNP
rs1180984900 747 dbSNP
rs754338343 750 dbSNP
rs904453669 753 dbSNP
rs1203182482 754 dbSNP
rs1053431886 767 dbSNP
rs1465877785 774 dbSNP
rs755344035 781 dbSNP
rs892148299 782 dbSNP
rs765523056 783 dbSNP
rs1031506396 786 dbSNP
rs960184440 801 dbSNP
rs1374790391 822 dbSNP
rs992584749 824 dbSNP
rs1448806724 836 dbSNP
rs765541957 838 dbSNP
rs945134810 873 dbSNP
rs1022701149 879 dbSNP
rs1414267478 881 dbSNP
rs1160998942 882 dbSNP
rs1438440379 882 dbSNP
rs751258152 886 dbSNP
rs3761625 895 dbSNP
rs1008313211 896 dbSNP
rs969679613 906 dbSNP
rs1018406756 907 dbSNP
rs1286399617 914 dbSNP
rs900065579 926 dbSNP
rs376736529 928 dbSNP
rs1242017646 929 dbSNP
rs780919284 931 dbSNP
rs1026969311 932 dbSNP
rs1306194638 941 dbSNP
rs1228979408 948 dbSNP
rs1210531709 950 dbSNP
rs951494322 954 dbSNP
rs561563100 955 dbSNP
rs748087553 960 dbSNP
rs1251087025 961 dbSNP
rs1219946584 962 dbSNP
rs1380285910 962 dbSNP
rs374135383 962 dbSNP
rs983476428 962 dbSNP
rs908700159 964 dbSNP
rs970809736 968 dbSNP
rs35101930 981 dbSNP
rs1184906612 983 dbSNP
rs1427791905 986 dbSNP
rs1415282053 987 dbSNP
rs1485166588 994 dbSNP
rs768168943 996 dbSNP
rs1218603384 997 dbSNP
rs980570110 1013 dbSNP
rs777205223 1014 dbSNP
rs1222166679 1017 dbSNP
rs1323604105 1018 dbSNP
rs1310734567 1024 dbSNP
rs3761626 1033 dbSNP
rs756786467 1034 dbSNP
rs921367045 1053 dbSNP
rs1360211273 1054 dbSNP
rs989830455 1070 dbSNP
rs913562130 1074 dbSNP
rs145370584 1076 dbSNP
rs1162137205 1091 dbSNP
rs1474590909 1097 dbSNP
rs1423965715 1107 dbSNP
rs1195313132 1113 dbSNP
rs1411145904 1121 dbSNP
rs1476737368 1123 dbSNP
rs1260718949 1128 dbSNP
rs745843275 1133 dbSNP
rs1489448856 1135 dbSNP
rs1280865458 1137 dbSNP
rs1263609986 1145 dbSNP
rs1213210790 1146 dbSNP
rs904400128 1158 dbSNP
rs1366781006 1159 dbSNP
rs1216981822 1161 dbSNP
rs1326229276 1171 dbSNP
rs1302470396 1172 dbSNP
rs1388855289 1176 dbSNP
rs998781547 1182 dbSNP
rs1325806671 1183 dbSNP
rs1219808285 1197 dbSNP
rs1053479900 1198 dbSNP
rs1400345444 1211 dbSNP
rs890171512 1216 dbSNP
rs1463779239 1217 dbSNP
rs943136663 1244 dbSNP
rs1039824872 1251 dbSNP
rs900035941 1253 dbSNP
rs1305558038 1258 dbSNP
rs769586849 1260 dbSNP
rs1274220611 1275 dbSNP
rs1326164153 1275 dbSNP
rs1483534970 1284 dbSNP
rs1207345755 1285 dbSNP
rs1014068107 1287 dbSNP
rs775460969 1288 dbSNP
rs1022647461 1297 dbSNP
rs969794424 1300 dbSNP
rs1240046254 1301 dbSNP
rs1488434932 1304 dbSNP
rs188276098 1310 dbSNP
rs1256804658 1311 dbSNP
rs1235959905 1316 dbSNP
rs1310749162 1327 dbSNP
rs1303359167 1339 dbSNP
rs1427614321 1340 dbSNP
rs192560467 1341 dbSNP
rs944974830 1348 dbSNP
rs1389177268 1356 dbSNP
rs138009590 1357 dbSNP
rs1004586351 1358 dbSNP
rs950466920 1371 dbSNP
rs1392992057 1393 dbSNP
rs1172956792 1409 dbSNP
rs1440286963 1417 dbSNP
rs774066307 1418 dbSNP
rs760775573 1419 dbSNP
rs746151788 1423 dbSNP
rs182940632 1426 dbSNP
rs1257138777 1434 dbSNP
rs1300741139 1441 dbSNP
rs1033498351 1454 dbSNP
rs1482494906 1455 dbSNP
rs1280130386 1456 dbSNP
rs958147017 1472 dbSNP
rs578220322 1487 dbSNP
rs4830885 1488 dbSNP
rs1236273738 1490 dbSNP
rs759992732 1513 dbSNP
rs765516538 1518 dbSNP
rs187280492 1520 dbSNP
rs1397363654 1521 dbSNP
rs1373214033 1523 dbSNP
rs753072771 1541 dbSNP
rs911576727 1544 dbSNP
rs191994884 1561 dbSNP
rs1434062351 1562 dbSNP
rs761146094 1565 dbSNP
rs1469695235 1570 dbSNP
rs1369084227 1572 dbSNP
rs374917948 1575 dbSNP
rs764621682 1593 dbSNP
rs776648294 1595 dbSNP
rs1230968978 1604 dbSNP
rs1287749129 1605 dbSNP
rs1321198781 1613 dbSNP
rs1222896239 1619 dbSNP
rs879026832 1625 dbSNP
rs1248986451 1635 dbSNP
rs976930559 1651 dbSNP
rs921439633 1666 dbSNP
rs1349356227 1671 dbSNP
rs931432263 1689 dbSNP
rs761970479 1690 dbSNP
rs1249106266 1695 dbSNP
rs887328785 1712 dbSNP
rs921316374 1730 dbSNP
rs1004484125 1737 dbSNP
rs1450928224 1738 dbSNP
rs184818429 1739 dbSNP
rs1412393931 1757 dbSNP
rs1316161218 1767 dbSNP
rs1400097381 1770 dbSNP
rs1391325992 1771 dbSNP
rs145272660 1772 dbSNP
rs1459931517 1775 dbSNP
rs756770947 1776 dbSNP
rs1194576106 1781 dbSNP
rs1479026876 1787 dbSNP
rs1343335288 1791 dbSNP
rs1434372111 1793 dbSNP
rs1320968981 1801 dbSNP
rs56870773 1805 dbSNP
rs1043202939 1822 dbSNP
rs1437459812 1823 dbSNP
rs528834787 1824 dbSNP
rs925968987 1825 dbSNP
rs1282671596 1831 dbSNP
rs934689284 1842 dbSNP
rs1272152724 1845 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000380600.1 | 3UTR | UCAAGUUAUUUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000380600.1 | 3UTR | UCAAGUUAUUUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
111 hsa-miR-3915 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059544 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha 2 2
MIRT081703 ZNF507 zinc finger protein 507 2 2
MIRT083311 ZCCHC3 zinc finger CCHC-type containing 3 2 6
MIRT119046 SFT2D3 SFT2 domain containing 3 2 2
MIRT189381 TXLNA taxilin alpha 2 4
MIRT195895 C16ORF72 chromosome 16 open reading frame 72 2 6
MIRT223807 OXR1 oxidation resistance 1 2 2
MIRT292954 ZNF146 zinc finger protein 146 2 4
MIRT293949 RPL13A ribosomal protein L13a 2 6
MIRT300900 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT339332 SESN2 sestrin 2 2 2
MIRT349304 ZNF317 zinc finger protein 317 2 2
MIRT364736 TOR1B torsin family 1 member B 2 2
MIRT366233 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT384605 CLIC4 chloride intracellular channel 4 2 2
MIRT401745 HLA-DRA major histocompatibility complex, class II, DR alpha 2 2
MIRT443169 UBL3 ubiquitin like 3 2 2
MIRT444215 METTL12 methyltransferase like 12 2 2
MIRT444375 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT445340 TCEANC transcription elongation factor A N-terminal and central domain containing 2 2
MIRT445474 KDM6A lysine demethylase 6A 2 2
MIRT445598 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT445630 TMEM50A transmembrane protein 50A 2 2
MIRT446012 VNN1 vanin 1 2 2
MIRT446115 ASTN1 astrotactin 1 2 2
MIRT446248 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT446382 SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein 2 2
MIRT446940 ZMAT3 zinc finger matrin-type 3 2 2
MIRT446967 SLCO4C1 solute carrier organic anion transporter family member 4C1 2 2
MIRT447178 PGRMC2 progesterone receptor membrane component 2 2 2
MIRT447209 APBB2 amyloid beta precursor protein binding family B member 2 2 2
MIRT447237 IHH indian hedgehog 2 2
MIRT447807 EMX1 empty spiracles homeobox 1 2 2
MIRT447853 RRP8 ribosomal RNA processing 8 2 4
MIRT448054 MMP15 matrix metallopeptidase 15 2 2
MIRT448094 RASD2 RASD family member 2 2 2
MIRT448704 KLHL11 kelch like family member 11 2 2
MIRT448851 FEM1C fem-1 homolog C 2 2
MIRT449488 ZBTB4 zinc finger and BTB domain containing 4 2 2
MIRT449785 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT450774 PDE3A phosphodiesterase 3A 2 2
MIRT451124 ZNF99 zinc finger protein 99 2 2
MIRT452676 GPR156 G protein-coupled receptor 156 2 2
MIRT452888 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453188 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453353 ZNF3 zinc finger protein 3 2 2
MIRT454502 ZFYVE27 zinc finger FYVE-type containing 27 2 2
MIRT454629 FAM83H family with sequence similarity 83 member H 2 2
MIRT455183 AGTRAP angiotensin II receptor associated protein 2 2
MIRT458204 FOXL2 forkhead box L2 2 2
MIRT458723 CES2 carboxylesterase 2 2 2
MIRT458942 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT460304 FLCN folliculin 2 2
MIRT460989 SYT7 synaptotagmin 7 2 2
MIRT461697 ZNF426 zinc finger protein 426 2 2
MIRT461903 NECAB3 N-terminal EF-hand calcium binding protein 3 2 2
MIRT462193 NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 2 2
MIRT462290 PPM1H protein phosphatase, Mg2+/Mn2+ dependent 1H 2 2
MIRT463795 XPOT exportin for tRNA 2 2
MIRT464649 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 4
MIRT465911 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 4
MIRT465992 TMEM189 transmembrane protein 189 2 4
MIRT466302 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT466575 TBC1D2B TBC1 domain family member 2B 2 2
MIRT470558 POU2F1 POU class 2 homeobox 1 2 2
MIRT471333 PERP PERP, TP53 apoptosis effector 2 2
MIRT471659 PALM2 paralemmin 2 2 2
MIRT472363 TSPAN1 tetraspanin 1 2 2
MIRT473468 MCFD2 multiple coagulation factor deficiency 2 2 2
MIRT474702 KIF3A kinesin family member 3A 2 2
MIRT476067 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT476077 GRB2 growth factor receptor bound protein 2 2 2
MIRT476423 GBA2 glucosylceramidase beta 2 2 2
MIRT476463 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT477877 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT478240 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT479460 CDK6 cyclin dependent kinase 6 2 2
MIRT481030 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT491496 HLA-DOA major histocompatibility complex, class II, DO alpha 2 2
MIRT497585 SLC23A1 solute carrier family 23 member 1 2 2
MIRT498542 TMEM30B transmembrane protein 30B 2 2
MIRT499263 NBPF11 NBPF member 11 2 2
MIRT504698 ZNF117 zinc finger protein 117 2 2
MIRT511288 KLHL15 kelch like family member 15 2 4
MIRT523121 HSP90B1 heat shock protein 90 beta family member 1 2 4
MIRT529601 H1F0 H1 histone family member 0 2 2
MIRT533481 TRIM71 tripartite motif containing 71 2 2
MIRT535571 NUP37 nucleoporin 37 2 4
MIRT537869 EDA2R ectodysplasin A2 receptor 2 2
MIRT538010 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552681 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 4
MIRT554986 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT556659 KMT2D lysine methyltransferase 2D 2 4
MIRT557437 GTPBP2 GTP binding protein 2 2 2
MIRT560813 CRTAP cartilage associated protein 2 2
MIRT562115 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT563103 IFRD2 interferon related developmental regulator 2 2 2
MIRT574199 LMNB1 lamin B1 2 2
MIRT623920 FMNL3 formin like 3 2 2
MIRT626551 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 2 2
MIRT645458 ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 2 2
MIRT649082 CACNA1B calcium voltage-gated channel subunit alpha1 B 2 2
MIRT659477 CLDN1 claudin 1 2 2
MIRT667950 HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 2 2
MIRT701981 MIER3 MIER family member 3 2 2
MIRT708694 TFDP2 transcription factor Dp-2 2 2
MIRT709649 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710090 FAM229B family with sequence similarity 229 member B 2 2
MIRT718396 ALDH1A3 aldehyde dehydrogenase 1 family member A3 2 2
MIRT724972 TNS1 tensin 1 2 2
MIRT756050 HRH4 histamine receptor H4 2 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3915 Paclitaxel 36314 NSC125973 approved resistant High Prostate Cancer cell line (DU-145, PC-3)
hsa-miR-3915 Cisplatin + Decitabine sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-3915 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3915 Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-3915 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3915 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3915 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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