pre-miRNA Information
pre-miRNA hsa-mir-548ah   
Genomic Coordinates chr4: 76575551 - 76575626
Description Homo sapiens miR-548ah stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548ah-3p
Sequence 47| CAAAAACUGCAGUUACUUUUGC |68
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 4 + 76575599 29233923 MiREDiBase
A-to-I 4 4 + 76575600 29233923 MiREDiBase
A-to-I 5 4 + 76575601 29233923 MiREDiBase
A-to-I 6 4 + 76575602 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1486932451 12 dbSNP
rs1036377818 16 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CRNKL1   
Synonyms CLF, CRN, Clf1, HCRN, MSTP021, SYF3
Description crooked neck pre-mRNA splicing factor 1
Transcript NM_016652   
Expression
Putative miRNA Targets on CRNKL1
3'UTR of CRNKL1
(miRNA target sites are highlighted)
>CRNKL1|NM_016652|3'UTR
   1 TCTTTTTTTCATAGACAAATGTTTTGTTATTTTTATAAATTAATTGTTTGGAACTCTTGTGACTCCTGGAAGTTCTTATA
  81 TATTTCACCAGTAAGAAATTGATTGGTATCTTTGATGGCTACTTTTTAAGTTATTTTTTAAATGCTCTTGGGTTAGCTAG
 161 GGGTAGGGATTGCAAGTAAAGGACTTTTTTAACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTTTCTAATGTCTGT
 241 CCACATCATGCATTAGGAAATGTAATTAAGGTAACATTCTACAGTTACTTTTCATGTCATACCCATAAAGATAGTTTATG
 321 CATTCATCTGAAATGTGTAACTTTTTCATGTCTTCAGAGTCACAGACTTGAGTTCATTTCCCAGCTCTGCCACTCATGAT
 401 TATATAACTTAATTTTCATTTTCCTCATTCACAAAATGGGCCAATAGTTTGACAGCTCATTTTGAAGATTACATTATAAA
 481 AGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAATTGTTTGTTCTAAGCCACTTTTAAAAATGGTTTCATTCCT
 561 TGTAGAATTGAATGCGAGTGGATTAATAATTTACCTTACTTTCTTACTAGTGTCCAGTTATATTGTTTTTTAGAACAACA
 641 CTTGGAAAATAATTTGCAGTGATTATATTTCTGAACAAGGTTCAGAAAACATTGTTTACTAAGAATTTAGTCTAATAATT
 721 TCAGTTAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTGTAATACCTTGTTTAAAGAATAATGGCTTGTTCACGTGTG
 801 TGCTATGAAAAATGATGTCCCATGTTCACATAAATTTGGGAAATTCTGGACTAAGACTTAAGTCTCGTTAATCAAATCTC
 881 TTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATATTATTTATTTCCCAAACTTAGTGGACAA
 961 TGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTATAGTAGAAAATGTCTACTCCTCACTGCTGACA
1041 TGTTAAACTTACTCTTGGTTTAGAGCATGTGTAGAAACACCTAAGGTAGCTCTATGCTAAATAATGAAGAGTAGCACAAG
1121 AATGAATGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGATCTGAGAGTTTTCCTTT
1201 AACCTGGACTGTGTTTCTCAAGCACATTTTTTCTTTGTTCACTGCCCAAGGACTAGAACTGTATTTTTAAGGTTGTTTTC
1281 CCCTAAAAGGACCTTTAGTAAGCAAATTTATTATTAAATGTGCACATCTTATTCACCCAAGGGAATAAAAGCTACTTCGT
1361 AATGTTGTTACTAAATTTTATCTTGAAAATAAATAACAGTGTTTGAGGACAGAAGAAACTAGGACTGTTGTTGAGATAAA
1441 ATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGCGGTGTCAGATCACTTCTCGAGTAGAGGTC
1521 TGCCTAGTGAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGAGAGATGAAAATAATAGGT
1601 CAGAATGCAAGTGACTTAATCACAGTCTTCCTAGAATTATCTGTTTATGTTGCATGAATGCATAAGAAAAAAATTCTGTC
1681 ATGTTCCCAAGGTAGAATTGTAATAAGCATGTGCCAGTGTGAAAGCTGGAAGGAAAAAAGCTATTCTCTAACAGGAGAAC
1761 ATAAAGATTCATTTCTCTCCCACCCTCAACTCCACCAAAGTAAATCCTTTCGATAGTAAAAGTTTAATAATTTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cguUUUCAUUGACGUCAAAAAc 5'
             |:|||:::|| ||||| | 
Target 5' tccAGAGTGGTTG-AGTTTGTa 3'
743 - 763 134.00 -11.42
2
miRNA  3' cgUUUUCAUUGACGUCAAAAAc 5'
            ||||  ||:  |||| ||| 
Target 5' tgAAAATAAATAACAGTGTTTg 3'
1384 - 1405 132.00 -6.70
3
miRNA  3' cguuUUCAUUGACGUCAAAAAc 5'
              ||||||  | | ||||| 
Target 5' ttgcAAGTAA-AGGACTTTTTt 3'
170 - 190 129.00 -6.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN28192069 43 COSMIC
COSN31511279 65 COSMIC
COSN31579222 121 COSMIC
COSN29590382 126 COSMIC
COSN1867219 305 COSMIC
COSN22364741 320 COSMIC
COSN5966692 666 COSMIC
COSN2838418 714 COSMIC
COSN14562979 1431 COSMIC
COSN20116316 1588 COSMIC
COSN20116311 1641 COSMIC
COSN31961834 1740 COSMIC
COSN5966691 1789 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs773846209 8 dbSNP
rs1361174051 10 dbSNP
rs536975424 11 dbSNP
rs1169694726 12 dbSNP
rs749567955 15 dbSNP
rs780470421 16 dbSNP
rs1199903420 18 dbSNP
rs1477699191 20 dbSNP
rs1334595150 26 dbSNP
rs753491016 26 dbSNP
rs770228658 30 dbSNP
rs960288927 31 dbSNP
rs765954327 46 dbSNP
rs746359428 47 dbSNP
rs112085981 50 dbSNP
rs1237128054 52 dbSNP
rs1262759047 56 dbSNP
rs976688517 59 dbSNP
rs1001789691 68 dbSNP
rs763809368 75 dbSNP
rs189229793 79 dbSNP
rs1249230398 84 dbSNP
rs184813090 84 dbSNP
rs1416838962 86 dbSNP
rs1183494182 87 dbSNP
rs1364077152 88 dbSNP
rs1469051294 91 dbSNP
rs372098197 99 dbSNP
rs1419989654 106 dbSNP
rs560421652 106 dbSNP
rs1052781795 107 dbSNP
rs560068573 109 dbSNP
rs1389813517 116 dbSNP
rs890796963 127 dbSNP
rs1025787542 130 dbSNP
rs1050132256 130 dbSNP
rs932573516 134 dbSNP
rs751630873 144 dbSNP
rs919768204 146 dbSNP
rs973853744 147 dbSNP
rs994339860 158 dbSNP
rs1484632563 166 dbSNP
rs942122523 172 dbSNP
rs1479366428 183 dbSNP
rs1197053744 185 dbSNP
rs907931602 190 dbSNP
rs1479926266 191 dbSNP
rs983491689 194 dbSNP
rs1265515800 195 dbSNP
rs79118662 198 dbSNP
rs1056217061 205 dbSNP
rs1480665072 211 dbSNP
rs746547738 213 dbSNP
rs371558462 219 dbSNP
rs1247215428 229 dbSNP
rs767863661 237 dbSNP
rs1045155921 245 dbSNP
rs1371354826 246 dbSNP
rs1404589437 251 dbSNP
rs1413541933 271 dbSNP
rs1281667549 276 dbSNP
rs192046680 277 dbSNP
rs1224576710 280 dbSNP
rs563156890 281 dbSNP
rs1306278447 282 dbSNP
rs1400081696 290 dbSNP
rs530098651 298 dbSNP
rs1052237905 300 dbSNP
rs935175595 304 dbSNP
rs922474608 312 dbSNP
rs976804326 313 dbSNP
rs1219763774 314 dbSNP
rs1270682297 315 dbSNP
rs1490448152 319 dbSNP
rs1185726121 325 dbSNP
rs1368874848 325 dbSNP
rs964119890 326 dbSNP
rs1417220673 327 dbSNP
rs150516071 330 dbSNP
rs561454983 337 dbSNP
rs1390836689 340 dbSNP
rs1265267212 348 dbSNP
rs1367702095 349 dbSNP
rs1194215027 351 dbSNP
rs1446536204 353 dbSNP
rs890817455 355 dbSNP
rs1259688397 356 dbSNP
rs1049377110 360 dbSNP
rs1216809997 360 dbSNP
rs1211912520 378 dbSNP
rs1247996338 393 dbSNP
rs1358103899 396 dbSNP
rs1488913926 404 dbSNP
rs565476218 405 dbSNP
rs1214757002 415 dbSNP
rs1265281132 415 dbSNP
rs771056477 439 dbSNP
rs1240164159 440 dbSNP
rs1486750998 445 dbSNP
rs1187000540 453 dbSNP
rs1242526489 459 dbSNP
rs1444069459 460 dbSNP
rs1161756763 469 dbSNP
rs1026323355 470 dbSNP
rs1406199610 475 dbSNP
rs1231856259 477 dbSNP
rs1320363967 479 dbSNP
rs1279419195 483 dbSNP
rs898374484 485 dbSNP
rs540512895 490 dbSNP
rs1315573494 493 dbSNP
rs12624987 494 dbSNP
rs1390986800 504 dbSNP
rs1356550423 511 dbSNP
rs187524609 516 dbSNP
rs1222823924 530 dbSNP
rs1281750236 548 dbSNP
rs1035883236 549 dbSNP
rs1324735653 554 dbSNP
rs1459683663 573 dbSNP
rs1216303810 574 dbSNP
rs535069614 575 dbSNP
rs904951924 576 dbSNP
rs938764728 580 dbSNP
rs1044714565 581 dbSNP
rs1245026554 583 dbSNP
rs76588215 588 dbSNP
rs766718060 595 dbSNP
rs771897489 599 dbSNP
rs1402745702 600 dbSNP
rs763364224 602 dbSNP
rs1405940998 606 dbSNP
rs556011951 606 dbSNP
rs183116705 609 dbSNP
rs1440920999 613 dbSNP
rs1277392634 614 dbSNP
rs1375086970 615 dbSNP
rs980100697 617 dbSNP
rs970716074 618 dbSNP
rs1252614237 619 dbSNP
rs935289580 621 dbSNP
rs1321223168 623 dbSNP
rs1205450472 625 dbSNP
rs867581774 630 dbSNP
rs1212011274 631 dbSNP
rs1021921643 632 dbSNP
rs1259082670 641 dbSNP
rs1471297162 643 dbSNP
rs1198615179 652 dbSNP
rs368952730 652 dbSNP
rs1429000004 663 dbSNP
rs1040885469 665 dbSNP
rs990400428 665 dbSNP
rs1179201244 680 dbSNP
rs956217902 680 dbSNP
rs34473409 684 dbSNP
rs1031832535 693 dbSNP
rs1234801452 698 dbSNP
rs942764523 702 dbSNP
rs1355874845 706 dbSNP
rs3186300 710 dbSNP
rs984103268 711 dbSNP
rs796447486 714 dbSNP
rs1438202349 715 dbSNP
rs1225178811 720 dbSNP
rs1275314522 723 dbSNP
rs1402260343 724 dbSNP
rs1331756803 728 dbSNP
rs1214019703 729 dbSNP
rs1338676324 729 dbSNP
rs952814489 730 dbSNP
rs778892600 731 dbSNP
rs1484105236 742 dbSNP
rs918632244 743 dbSNP
rs75503129 744 dbSNP
rs867360055 751 dbSNP
rs750722170 753 dbSNP
rs1202054951 767 dbSNP
rs533792996 782 dbSNP
rs566935125 783 dbSNP
rs548733406 784 dbSNP
rs1420993540 785 dbSNP
rs201793234 790 dbSNP
rs999060492 793 dbSNP
rs372848212 795 dbSNP
rs530078857 796 dbSNP
rs192741116 800 dbSNP
rs551246970 801 dbSNP
rs969127715 802 dbSNP
rs938781888 805 dbSNP
rs1023814578 812 dbSNP
rs928695094 813 dbSNP
rs1278970138 823 dbSNP
rs1231679391 824 dbSNP
rs1044797079 831 dbSNP
rs753432900 834 dbSNP
rs893461056 837 dbSNP
rs1378654369 840 dbSNP
rs914560765 846 dbSNP
rs1250505031 847 dbSNP
rs548267952 847 dbSNP
rs1449486691 855 dbSNP
rs990431532 858 dbSNP
rs1309453899 860 dbSNP
rs1382965954 862 dbSNP
rs1426184183 864 dbSNP
rs1030649641 866 dbSNP
rs1383925717 867 dbSNP
rs78877184 868 dbSNP
rs1380378149 872 dbSNP
rs956249083 902 dbSNP
rs1365856237 904 dbSNP
rs1435819545 908 dbSNP
rs999385814 911 dbSNP
rs924792486 912 dbSNP
rs1380739854 913 dbSNP
rs13044732 925 dbSNP
rs955308624 932 dbSNP
rs1350393669 933 dbSNP
rs1203774637 938 dbSNP
rs1270508173 942 dbSNP
rs761945075 942 dbSNP
rs373746422 946 dbSNP
rs996997634 949 dbSNP
rs1182387642 953 dbSNP
rs565488911 957 dbSNP
rs889659796 960 dbSNP
rs1425076922 961 dbSNP
rs1187806221 962 dbSNP
rs77985149 976 dbSNP
rs1004097668 978 dbSNP
rs1161107247 982 dbSNP
rs776101486 983 dbSNP
rs139689547 984 dbSNP
rs1469210781 986 dbSNP
rs1334659376 992 dbSNP
rs1403996875 994 dbSNP
rs1397920192 996 dbSNP
rs1226012502 1002 dbSNP
rs1313642438 1010 dbSNP
rs1335406212 1020 dbSNP
rs1056700742 1022 dbSNP
rs565376063 1024 dbSNP
rs931436659 1025 dbSNP
rs528716844 1027 dbSNP
rs1421815540 1036 dbSNP
rs1203551596 1040 dbSNP
rs1381166712 1054 dbSNP
rs1003341769 1057 dbSNP
rs1200546887 1060 dbSNP
rs918568623 1061 dbSNP
rs905025267 1064 dbSNP
rs187766794 1068 dbSNP
rs1044512649 1069 dbSNP
rs1480026735 1075 dbSNP
rs111720765 1080 dbSNP
rs1379313030 1091 dbSNP
rs1188913656 1098 dbSNP
rs928876951 1099 dbSNP
rs1303534258 1107 dbSNP
rs1054436501 1108 dbSNP
rs934903447 1111 dbSNP
rs1310128670 1112 dbSNP
rs980235067 1122 dbSNP
rs1208090061 1127 dbSNP
rs970625237 1129 dbSNP
rs1351478828 1131 dbSNP
rs1281866109 1133 dbSNP
rs1314464860 1137 dbSNP
rs752324164 1140 dbSNP
rs1233287596 1141 dbSNP
rs1250290279 1143 dbSNP
rs148010578 1170 dbSNP
rs957840824 1181 dbSNP
rs545677564 1182 dbSNP
rs555750318 1184 dbSNP
rs6136921 1185 dbSNP
rs1490108697 1186 dbSNP
rs1285698017 1187 dbSNP
rs11467884 1192 dbSNP
rs11470008 1192 dbSNP
rs1427134343 1197 dbSNP
rs921414779 1204 dbSNP
rs975217298 1211 dbSNP
rs1315427067 1219 dbSNP
rs571075400 1224 dbSNP
rs1169716182 1225 dbSNP
rs1372543134 1227 dbSNP
rs143527121 1227 dbSNP
rs1354728804 1233 dbSNP
rs1371411631 1236 dbSNP
rs552324975 1237 dbSNP
rs573590476 1237 dbSNP
rs1003793353 1241 dbSNP
rs1387834757 1250 dbSNP
rs1295585396 1251 dbSNP
rs951305482 1254 dbSNP
rs1310932858 1257 dbSNP
rs577063405 1259 dbSNP
rs759842161 1259 dbSNP
rs1401927930 1261 dbSNP
rs1361204807 1263 dbSNP
rs1317936404 1265 dbSNP
rs1358331680 1269 dbSNP
rs1219920219 1274 dbSNP
rs1399155496 1279 dbSNP
rs901062871 1279 dbSNP
rs1488706284 1280 dbSNP
rs6136920 1290 dbSNP
rs1416466940 1291 dbSNP
rs1164199136 1292 dbSNP
rs1447667986 1299 dbSNP
rs1190599033 1303 dbSNP
rs1390974655 1307 dbSNP
rs558607057 1308 dbSNP
rs1163006081 1313 dbSNP
rs1351982137 1317 dbSNP
rs1003854080 1321 dbSNP
rs1006847302 1322 dbSNP
rs1352780455 1329 dbSNP
rs1279876966 1332 dbSNP
rs905056845 1333 dbSNP
rs574547012 1340 dbSNP
rs79557068 1345 dbSNP
rs1243285597 1346 dbSNP
rs377622100 1358 dbSNP
rs1214816530 1359 dbSNP
rs536745251 1359 dbSNP
rs897260889 1362 dbSNP
rs1258818625 1367 dbSNP
rs1466223213 1370 dbSNP
rs934682560 1370 dbSNP
rs1444917517 1372 dbSNP
rs903180783 1373 dbSNP
rs1444126157 1378 dbSNP
rs1291830649 1383 dbSNP
rs1416249241 1384 dbSNP
rs777008740 1390 dbSNP
rs1333797152 1393 dbSNP
rs1291398713 1397 dbSNP
rs1445246709 1399 dbSNP
rs747814549 1399 dbSNP
rs1036996791 1401 dbSNP
rs769620077 1405 dbSNP
rs749149229 1406 dbSNP
rs114059992 1413 dbSNP
rs752054296 1414 dbSNP
rs1063065 1415 dbSNP
rs949023128 1418 dbSNP
rs975963078 1424 dbSNP
rs1208118194 1430 dbSNP
rs1428973491 1434 dbSNP
rs780089925 1434 dbSNP
rs1351824382 1436 dbSNP
rs1410177749 1439 dbSNP
rs914712596 1440 dbSNP
rs1324386227 1442 dbSNP
rs1429213401 1443 dbSNP
rs750205253 1445 dbSNP
rs1335653783 1449 dbSNP
rs941115179 1454 dbSNP
rs766838330 1457 dbSNP
rs1305838699 1461 dbSNP
rs532612958 1461 dbSNP
rs1228793779 1465 dbSNP
rs1282485816 1468 dbSNP
rs1342823742 1472 dbSNP
rs1173512032 1475 dbSNP
rs958004809 1476 dbSNP
rs16981448 1478 dbSNP
rs532430822 1479 dbSNP
rs189994615 1486 dbSNP
rs879904612 1491 dbSNP
rs1035087451 1492 dbSNP
rs781145888 1498 dbSNP
rs1183352434 1504 dbSNP
rs1365001470 1505 dbSNP
rs1268745635 1507 dbSNP
rs1474107548 1509 dbSNP
rs1425218418 1510 dbSNP
rs368168325 1512 dbSNP
rs1248098918 1516 dbSNP
rs965011422 1518 dbSNP
rs1019262413 1532 dbSNP
rs1372028460 1536 dbSNP
rs969688457 1538 dbSNP
rs1213886249 1542 dbSNP
rs1438488773 1543 dbSNP
rs1046341 1547 dbSNP
rs1467886470 1548 dbSNP
rs1345796013 1550 dbSNP
rs751896237 1551 dbSNP
rs1272664979 1556 dbSNP
rs1023471452 1570 dbSNP
rs1289587723 1571 dbSNP
rs1450284238 1577 dbSNP
rs1301424954 1579 dbSNP
rs1201638385 1582 dbSNP
rs1007204370 1584 dbSNP
rs75638907 1590 dbSNP
rs752738811 1593 dbSNP
rs953998181 1593 dbSNP
rs1027208519 1596 dbSNP
rs140085240 1596 dbSNP
rs893636636 1597 dbSNP
rs554484235 1598 dbSNP
rs1033134509 1602 dbSNP
rs186418351 1607 dbSNP
rs1229371002 1619 dbSNP
rs1308003993 1619 dbSNP
rs998921234 1622 dbSNP
rs773294852 1624 dbSNP
rs561149527 1638 dbSNP
rs903212691 1640 dbSNP
rs1051505142 1641 dbSNP
rs1291171499 1641 dbSNP
rs397725179 1642 dbSNP
rs1186391299 1643 dbSNP
rs1491585634 1643 dbSNP
rs386393496 1646 dbSNP
rs56296396 1646 dbSNP
rs146345717 1647 dbSNP
rs200155428 1647 dbSNP
rs900042196 1647 dbSNP
rs1455553720 1649 dbSNP
rs748784989 1650 dbSNP
rs1369763091 1651 dbSNP
rs897211825 1662 dbSNP
rs866061538 1663 dbSNP
rs1247378640 1666 dbSNP
rs769799812 1673 dbSNP
rs1285135405 1674 dbSNP
rs910048833 1678 dbSNP
rs1440412936 1681 dbSNP
rs541485982 1683 dbSNP
rs929688703 1686 dbSNP
rs1199396703 1690 dbSNP
rs1333780114 1691 dbSNP
rs529732249 1695 dbSNP
rs907186163 1698 dbSNP
rs1168870490 1700 dbSNP
rs1407744046 1701 dbSNP
rs1410912105 1705 dbSNP
rs1426601983 1707 dbSNP
rs769198643 1707 dbSNP
rs1193930755 1710 dbSNP
rs1457800149 1715 dbSNP
rs1400223452 1717 dbSNP
rs1397976454 1719 dbSNP
rs1335187407 1720 dbSNP
rs948957145 1728 dbSNP
rs914848149 1729 dbSNP
rs1054993095 1730 dbSNP
rs80253353 1732 dbSNP
rs769789926 1740 dbSNP
rs749798812 1752 dbSNP
rs745856469 1754 dbSNP
rs967841464 1758 dbSNP
rs1200671164 1759 dbSNP
rs1250685681 1761 dbSNP
rs1029666360 1763 dbSNP
rs1481917177 1763 dbSNP
rs1491418503 1765 dbSNP
rs534673943 1766 dbSNP
rs899821890 1766 dbSNP
rs1375995946 1769 dbSNP
rs1314064983 1771 dbSNP
rs1005747707 1780 dbSNP
rs1174437338 1780 dbSNP
rs888630570 1781 dbSNP
rs1047197368 1787 dbSNP
rs576798726 1787 dbSNP
rs139373723 1788 dbSNP
rs375501594 1788 dbSNP
rs1299899057 1790 dbSNP
rs1332305036 1791 dbSNP
rs1233920440 1795 dbSNP
rs1273380383 1800 dbSNP
rs1339664099 1805 dbSNP
rs1206912452 1807 dbSNP
rs565438448 1807 dbSNP
rs965126355 1808 dbSNP
rs927670745 1811 dbSNP
rs912182218 1812 dbSNP
rs947751401 1812 dbSNP
rs1392348050 1814 dbSNP
rs757155171 1815 dbSNP
rs1428035693 1822 dbSNP
rs1372993551 1823 dbSNP
rs1355472335 1825 dbSNP
rs916232746 1825 dbSNP
rs989424809 1826 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL35
Disease MIMAT0020957
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1020022. RNA binding protein: AGO2. Condition:EBV B95-8-infected ...

- Skalsky RL; Corcoran DL; Gottwein E; Frank et al., 2012, PLoS pathogens.

Article - Skalsky RL; Corcoran DL; Gottwein E; Frank et al.
- PLoS pathogens, 2012
Epstein-Barr virus (EBV) is a ubiquitous human herpesvirus linked to a number of B cell cancers and lymphoproliferative disorders. During latent infection, EBV expresses 25 viral pre-microRNAs (miRNAs) and induces the expression of specific host miRNAs, such as miR-155 and miR-21, which potentially play a role in viral oncogenesis. To date, only a limited number of EBV miRNA targets have been identified; thus, the role of EBV miRNAs in viral pathogenesis and/or lymphomagenesis is not well defined. Here, we used photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) combined with deep sequencing and computational analysis to comprehensively examine the viral and cellular miRNA targetome in EBV strain B95-8-infected lymphoblastoid cell lines (LCLs). We identified 7,827 miRNA-interaction sites in 3,492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs. 24 PAR-CLIP-identified miRNA:3'UTR interactions were confirmed by reporter assays. Our results reveal that EBV miRNAs predominantly target cellular transcripts during latent infection, thereby manipulating the host environment. Furthermore, targets of EBV miRNAs are involved in multiple cellular processes that are directly relevant to viral infection, including innate immunity, cell survival, and cell proliferation. Finally, we present evidence that myc-regulated host miRNAs from the miR-17/92 cluster can regulate latent viral gene expression. This comprehensive survey of the miRNA targetome in EBV-infected B cells represents a key step towards defining the functions of EBV-encoded miRNAs, and potentially, identifying novel therapeutic targets for EBV-associated malignancies.
LinkOut: [PMID: 22291592]
CLIP-seq Support 1 for dataset GSM1020022
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL35 / EBV B95-8-infected, 4-thiouridine, RNase T1
Location of target site ENST00000377327.4 | 3UTR | UCAAGUUUUUUUUUUUUUUUUUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22291592 / GSE41437
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000377327.4 | 3UTR | UCAAGUUUUUUUUUUUUUUUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000377327.4 | 3UTR | UCAAGUUUUUUUUUUUUUUUUUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
269 hsa-miR-548ah-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055349 PDCD4 programmed cell death 4 2 2
MIRT078710 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT088880 FOXN2 forkhead box N2 2 10
MIRT099612 ID4 inhibitor of DNA binding 4, HLH protein 2 4
MIRT111805 MPZL1 myelin protein zero like 1 2 2
MIRT166778 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 2
MIRT221310 LMBR1 limb development membrane protein 1 2 2
MIRT269387 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT309062 C4ORF3 chromosome 4 open reading frame 3 2 2
MIRT318550 SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein 2 2
MIRT325436 CKS2 CDC28 protein kinase regulatory subunit 2 2 2
MIRT331326 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT336802 ARF1 ADP ribosylation factor 1 2 4
MIRT350505 MRGBP MRG domain binding protein 2 6
MIRT374401 M6PR mannose-6-phosphate receptor, cation dependent 2 4
MIRT399357 IER2 immediate early response 2 2 2
MIRT401033 MOB1B MOB kinase activator 1B 2 4
MIRT441729 HAUS6 HAUS augmin like complex subunit 6 2 2
MIRT442381 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442407 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT443989 GJD3 gap junction protein delta 3 2 4
MIRT444047 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT444245 CHMP1B charged multivesicular body protein 1B 2 2
MIRT444402 FRMD5 FERM domain containing 5 2 2
MIRT444463 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT444644 HSBP1 heat shock factor binding protein 1 2 2
MIRT444854 EXD2 exonuclease 3'-5' domain containing 2 2 2
MIRT444988 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT445107 ZNF207 zinc finger protein 207 2 2
MIRT445449 HSPA14 heat shock protein family A (Hsp70) member 14 2 4
MIRT445515 CRNKL1 crooked neck pre-mRNA splicing factor 1 2 4
MIRT445590 RCC2 regulator of chromosome condensation 2 2 2
MIRT445679 TNFSF15 TNF superfamily member 15 2 2
MIRT445733 PGK1 phosphoglycerate kinase 1 2 2
MIRT445827 DNAAF3 dynein axonemal assembly factor 3 2 2
MIRT445996 CD1D CD1d molecule 2 2
MIRT446068 RABIF RAB interacting factor 2 2
MIRT446146 ST6GAL2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 2 2
MIRT446302 ACSL3 acyl-CoA synthetase long chain family member 3 2 2
MIRT446426 ABHD2 abhydrolase domain containing 2 2 2
MIRT447263 C3orf30 chromosome 3 open reading frame 30 2 2
MIRT447692 MTPAP mitochondrial poly(A) polymerase 2 2
MIRT447753 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT447883 LMAN1 lectin, mannose binding 1 2 2
MIRT448032 GSR glutathione-disulfide reductase 2 2
MIRT448155 P2RY10 purinergic receptor P2Y10 2 2
MIRT448215 SNAI2 snail family transcriptional repressor 2 2 2
MIRT448414 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT448890 DENND4C DENN domain containing 4C 2 2
MIRT449043 ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 2 2
MIRT449269 PALM2 paralemmin 2 2 2
MIRT449571 GPC5 glypican 5 2 4
MIRT450116 IMP3 IMP3, U3 small nucleolar ribonucleoprotein 2 2
MIRT450149 GABRB3 gamma-aminobutyric acid type A receptor beta3 subunit 2 2
MIRT450606 EXOC2 exocyst complex component 2 2 2
MIRT459247 ADRBK1 G protein-coupled receptor kinase 2 2 2
MIRT464464 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465114 TSC22D2 TSC22 domain family member 2 2 4
MIRT466778 SUZ12 SUZ12 polycomb repressive complex 2 subunit 2 4
MIRT467990 SKIL SKI like proto-oncogene 2 4
MIRT469263 RHOB ras homolog family member B 2 2
MIRT470717 POGK pogo transposable element derived with KRAB domain 2 2
MIRT472380 NEK7 NIMA related kinase 7 2 2
MIRT475022 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT475248 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 2
MIRT475678 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT479405 CDKN1B cyclin dependent kinase inhibitor 1B 2 10
MIRT482621 ABCE1 ATP binding cassette subfamily E member 1 2 2
MIRT490488 FEM1C fem-1 homolog C 2 2
MIRT492176 SOX4 SRY-box 4 2 10
MIRT493559 HSPA5 heat shock protein family A (Hsp70) member 5 2 2
MIRT494647 ARNTL aryl hydrocarbon receptor nuclear translocator like 2 2
MIRT497510 ZNF652 zinc finger protein 652 2 4
MIRT499150 HSPA1B heat shock protein family A (Hsp70) member 1B 2 8
MIRT502081 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT502824 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 6
MIRT503936 FBXL13 F-box and leucine rich repeat protein 13 2 4
MIRT504229 MYO6 myosin VI 2 2
MIRT506016 PURA purine rich element binding protein A 2 2
MIRT506416 NHLRC3 NHL repeat containing 3 2 6
MIRT508022 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT508293 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 4
MIRT508358 HES7 hes family bHLH transcription factor 7 2 6
MIRT510848 RARB retinoic acid receptor beta 2 6
MIRT511509 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT511980 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 4
MIRT512301 AMER1 APC membrane recruitment protein 1 2 6
MIRT515651 MYBPC1 myosin binding protein C, slow type 2 2
MIRT518423 SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 2 2
MIRT519692 ZNF620 zinc finger protein 620 2 2
MIRT521598 PSMA2 proteasome subunit alpha 2 2 4
MIRT527241 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT527279 FBLN2 fibulin 2 2 2
MIRT527377 MGARP mitochondria localized glutamic acid rich protein 2 2
MIRT527448 COL4A3 collagen type IV alpha 3 chain 2 2
MIRT528342 TBC1D22B TBC1 domain family member 22B 2 2
MIRT529098 ZNF100 zinc finger protein 100 2 2
MIRT529661 ZNF81 zinc finger protein 81 2 2
MIRT530057 TRIM72 tripartite motif containing 72 2 2
MIRT530271 MKRN3 makorin ring finger protein 3 2 2
MIRT530873 TRUB1 TruB pseudouridine synthase family member 1 2 2
MIRT531246 FANCC Fanconi anemia complementation group C 2 2
MIRT531408 TMEM18 transmembrane protein 18 2 2
MIRT534421 SEMA4F ssemaphorin 4F 2 2
MIRT534500 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT534765 RASGEF1A RasGEF domain family member 1A 2 2
MIRT534942 PTBP3 polypyrimidine tract binding protein 3 2 2
MIRT536972 HAS3 hyaluronan synthase 3 2 2
MIRT537633 ERI1 exoribonuclease 1 2 2
MIRT537720 ELK3 ELK3, ETS transcription factor 2 2
MIRT538772 CABLES1 Cdk5 and Abl enzyme substrate 1 2 2
MIRT540958 SLC25A43 solute carrier family 25 member 43 2 2
MIRT541274 GPC4 glypican 4 2 4
MIRT543347 ZNF829 zinc finger protein 829 2 2
MIRT543617 MFAP3 microfibril associated protein 3 2 2
MIRT543644 YY2 YY2 transcription factor 2 2
MIRT544227 GTF2B general transcription factor IIB 2 2
MIRT544413 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544939 SNCB synuclein beta 2 2
MIRT545321 SPC25 SPC25, NDC80 kinetochore complex component 2 2
MIRT546088 VEZF1 vascular endothelial zinc finger 1 2 2
MIRT548516 DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 2 2
MIRT548632 DAZAP1 DAZ associated protein 1 2 4
MIRT551028 SPPL3 signal peptide peptidase like 3 2 2
MIRT552058 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 4
MIRT553268 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT553297 TSPAN3 tetraspanin 3 2 2
MIRT553613 TM7SF3 transmembrane 7 superfamily member 3 2 2
MIRT554201 SLC35D1 solute carrier family 35 member D1 2 2
MIRT554795 RGPD4 RANBP2-like and GRIP domain containing 4 2 2
MIRT554838 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT555709 PDZD8 PDZ domain containing 8 2 2
MIRT556063 MTF2 metal response element binding transcription factor 2 2 4
MIRT557999 FAM160B1 family with sequence similarity 160 member B1 2 2
MIRT558674 CNIH cornichon family AMPA receptor auxiliary protein 1 1 1
MIRT558954 CBFB core-binding factor beta subunit 2 2
MIRT559026 C20orf24 chromosome 20 open reading frame 24 2 2
MIRT559103 C18orf25 chromosome 18 open reading frame 25 2 2
MIRT559858 GSKIP GSK3B interacting protein 2 2
MIRT561591 SKI SKI proto-oncogene 2 2
MIRT562262 GRB2 growth factor receptor bound protein 2 2 2
MIRT562413 EIF2S2 eukaryotic translation initiation factor 2 subunit beta 2 2
MIRT562646 ARID1A AT-rich interaction domain 1A 2 4
MIRT564273 DEPDC1B DEP domain containing 1B 2 2
MIRT565301 TMEM64 transmembrane protein 64 2 2
MIRT565392 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT566564 OTUD4 OTU deubiquitinase 4 2 2
MIRT566708 MTMR3 myotubularin related protein 3 2 2
MIRT566784 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT568411 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT571817 PHF19 PHD finger protein 19 2 2
MIRT571989 HOXA9 homeobox A9 2 2
MIRT573750 KHSRP KH-type splicing regulatory protein 2 2
MIRT573993 DDX21 DExD-box helicase 21 2 2
MIRT574488 RPS16 ribosomal protein S16 2 2
MIRT574507 PSAT1 phosphoserine aminotransferase 1 2 2
MIRT574553 NRBF2 nuclear receptor binding factor 2 2 2
MIRT576680 H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 2 2
MIRT608353 ZRANB1 zinc finger RANBP2-type containing 1 2 2
MIRT608634 ATP9A ATPase phospholipid transporting 9A (putative) 2 6
MIRT609179 ZNF581 zinc finger protein 581 2 2
MIRT609792 NHSL1 NHS like 1 2 2
MIRT610675 SYT2 synaptotagmin 2 2 4
MIRT610880 NUDCD3 NudC domain containing 3 2 2
MIRT611024 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT611670 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT612067 PDGFRA platelet derived growth factor receptor alpha 2 2
MIRT612486 SLC25A11 solute carrier family 25 member 11 2 2
MIRT612648 PSPC1 paraspeckle component 1 2 2
MIRT612688 PLXNA4 plexin A4 2 2
MIRT613108 ESR1 estrogen receptor 1 2 2
MIRT613549 AMPD3 adenosine monophosphate deaminase 3 2 2
MIRT614532 SUB1 SUB1 homolog, transcriptional regulator 2 2
MIRT614569 GMPR guanosine monophosphate reductase 2 2
MIRT614661 ZNF608 zinc finger protein 608 2 2
MIRT614675 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT615313 CCDC158 coiled-coil domain containing 158 2 2
MIRT616112 GGCX gamma-glutamyl carboxylase 2 2
MIRT617750 MICA MHC class I polypeptide-related sequence A 2 2
MIRT618797 ZIC2 Zic family member 2 2 2
MIRT619227 FUNDC2 FUN14 domain containing 2 2 2
MIRT620281 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT620491 XKR6 XK related 6 2 2
MIRT622613 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT622967 OXSR1 oxidative stress responsive 1 2 2
MIRT623482 KDM5A lysine demethylase 5A 2 2
MIRT623626 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT623699 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT624815 ADAM17 ADAM metallopeptidase domain 17 2 2
MIRT625188 GRIK4 glutamate ionotropic receptor kainate type subunit 4 2 2
MIRT625367 CDKL2 cyclin dependent kinase like 2 2 2
MIRT625919 GBP6 guanylate binding protein family member 6 2 2
MIRT625962 RNF2 ring finger protein 2 2 2
MIRT626264 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT626425 ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 2 2
MIRT626851 FDX1 ferredoxin 1 2 2
MIRT628014 MEF2C myocyte enhancer factor 2C 2 2
MIRT628047 LIMD1 LIM domains containing 1 2 2
MIRT628360 CCDC117 coiled-coil domain containing 117 2 2
MIRT628461 ANAPC16 anaphase promoting complex subunit 16 2 2
MIRT630929 UNC93A unc-93 homolog A 2 2
MIRT635226 CD59 CD59 molecule (CD59 blood group) 2 2
MIRT635478 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT638149 TTC26 tetratricopeptide repeat domain 26 2 2
MIRT638295 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT638431 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT640275 TCF24 transcription factor 24 2 2
MIRT641183 STX4 syntaxin 4 2 2
MIRT642295 ZNF99 zinc finger protein 99 2 2
MIRT643270 ZNF566 zinc finger protein 566 2 2
MIRT643581 CTNNA3 catenin alpha 3 2 2
MIRT644173 GIN1 gypsy retrotransposon integrase 1 2 2
MIRT644433 VDR vitamin D receptor 2 2
MIRT644614 C17orf77 chromosome 17 open reading frame 77 2 2
MIRT644855 PGM2 phosphoglucomutase 2 2 2
MIRT645449 ATF6B activating transcription factor 6 beta 2 2
MIRT647203 ZNF583 zinc finger protein 583 2 2
MIRT649421 CDC14B cell division cycle 14B 2 2
MIRT650499 UFM1 ubiquitin fold modifier 1 2 2
MIRT650695 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT651209 ZNF280B zinc finger protein 280B 2 2
MIRT653782 SIX4 SIX homeobox 4 2 2
MIRT655057 PKN2 protein kinase N2 2 2
MIRT655707 NUDT21 nudix hydrolase 21 2 2
MIRT656943 KIAA1456 KIAA1456 2 2
MIRT658275 FAXC failed axon connections homolog 2 2
MIRT658519 ETV3 ETS variant 3 2 2
MIRT658655 ENAH ENAH, actin regulator 2 2
MIRT658688 EMP2 epithelial membrane protein 2 2 2
MIRT659241 CXCR5 C-X-C motif chemokine receptor 5 2 2
MIRT659289 CTDSPL2 CTD small phosphatase like 2 2 2
MIRT660101 BTBD3 BTB domain containing 3 2 2
MIRT660463 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT663648 INTU inturned planar cell polarity protein 2 2
MIRT664065 KIAA1551 KIAA1551 2 2
MIRT666140 SPATS2L spermatogenesis associated serine rich 2 like 2 2
MIRT675549 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT684998 RPL10A ribosomal protein L10a 2 2
MIRT685687 TRIM45 tripartite motif containing 45 2 2
MIRT687485 NHLRC2 NHL repeat containing 2 2 2
MIRT687799 KCNJ15 potassium voltage-gated channel subfamily J member 15 2 2
MIRT687911 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT687962 HHIP hedgehog interacting protein 2 2
MIRT689214 ZNF574 zinc finger protein 574 2 2
MIRT689481 SCIMP SLP adaptor and CSK interacting membrane protein 2 2
MIRT690495 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT692284 XRN2 5'-3' exoribonuclease 2 2 2
MIRT693054 KIAA1324 KIAA1324 2 2
MIRT697437 ZFHX3 zinc finger homeobox 3 2 2
MIRT698469 TJP1 tight junction protein 1 2 2
MIRT699027 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699779 SEMA4D semaphorin 4D 2 2
MIRT701863 MRO maestro 2 2
MIRT702152 MAP3K1 mitogen-activated protein kinase kinase kinase 1 2 2
MIRT702235 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT703744 FAM126B family with sequence similarity 126 member B 2 2
MIRT704271 DGS2 DiGeorge syndrome/velocardiofacial syndrome complex 2 2 2
MIRT707745 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT709855 SNX12 sorting nexin 12 2 2
MIRT712741 LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 2 2
MIRT712948 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT713142 PKIA cAMP-dependent protein kinase inhibitor alpha 2 2
MIRT715529 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT718275 ZNF749 zinc finger protein 749 2 2
MIRT720146 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT722713 ZNF460 zinc finger protein 460 2 2
MIRT723253 TMLHE trimethyllysine hydroxylase, epsilon 2 2
MIRT724240 DGKE diacylglycerol kinase epsilon 2 2
MIRT725076 WTIP WT1 interacting protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548ah-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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