miRTarBase - #MIRT445561


—
pre-miRNA Information
pre-miRNA hsa-mir-6868   
Genomic Coordinates chr17: 76098019 - 76098076
Description Homo sapiens miR-6868 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6868-3p
Sequence 38| UUCCUUCUGUUGUCUGUGCAG |58
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM4415890 16 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1268215934 1 dbSNP
rs199573454 9 dbSNP
rs893365109 12 dbSNP
rs370367037 13 dbSNP
rs7208391 16 dbSNP
rs752026363 19 dbSNP
rs113525369 20 dbSNP
Putative Targets

Gene Information
Gene Symbol POFUT1   
Synonyms DDD2, FUT12, O-FUT, O-Fuc-T, O-FucT-1, OFUCT1
Description protein O-fucosyltransferase 1
Transcript NM_015352   
Other Transcripts NM_172236   
Expression
Putative miRNA Targets on POFUT1
3'UTR of POFUT1
(miRNA target sites are highlighted)		 
>POFUT1|NM_015352|3'UTR
   1 TTCTGGCCGGAGCACCAGACCCTCTGATCCTGGAGGGACCAGAGTCTGAGCTGGTCCTTCCAGCCAGGCCTGGCAGCCAG
  81 AGGTGCTCCGGGATTGCAAACTCCTCTTCTCACCTGCCAAAGATGGAGAAGAGTGCCAGGGACCCCTCAAGGAGGGAGAC
 161 GCTCCATATCCCAGGGCATAGGACTTGCAGGTTCCTAGGAGCAGGAGCATCTCCCATCGCACGTGCTTTCTGCTCTTCTG
 241 GGAATTTCTCACACTGGCAAAGCAGTCCAGCCTCCGTCTTCTGGTCCACTCTGCTCTGAGCAGCCTGGGATGCTGAACTC
 321 TTCAGAGAGATTTTTTTATAGAGAGATTTCTATAATTTTGATACAAGGTCATGACTATCCTAGAACTCTCTGTGGTTTTT
 401 GAAAATCATTGAATTCTATTAATGTAGGTACCTAAAGTGACCTTAACTGAATGTGGATGAGGCTGGGGCTGGTGTGGGTC
 481 TTTTGGCTGCTTTTCAAGGTGTCCCCCAATGTGGCCCTCAAGAGCCATCCCCACTGCCTGGCCAGAGCCATTGTTGTCCC
 561 CTACTTCCTAGGCCATTTCTGGGGCTTGGGGGATGAATGCTGTCCTGTGCTGTAAACACTATGCAAATGGAAGTTATCGG
 641 TTGTGGTGCTGTGCAGCGCTCTGTGGGCGACTAAGTGCCACTCACGCAGCATGTTCCTGGCAAGGAGCACATACCATCAA
 721 GCCACACTATCATGGTATTGTTCTCACAGTCTTTTGGTGGTTGATGGCCACTGCAAACCTGGCACCATCAGATCTCTTCT
 801 GATCTCTTGCCCCAGTGGGGCCTGGTTGGTAGAATGTTGGCATTCGGTTGATATCCAAAGCCTGTTCTCCCAGCCGTCCT
 881 CCTGCAGCTGGAGCCTTCAGGCCGTATTCTCACGAGGGAACGTTTGCCAAGGCTCTGACCTCACAGAAGATGCCCAGGGC
 961 CCAGAAGCCATCAGAATTATCAGTGGAGAAGCACCTTTTGACTCTTCCCTTCCAATGTAATCTCTGCCAACACCATGAGG
1041 CTTAAGGTGCTCTAAGTCATGAGTGTTTTGGTCTCAAATGCTGCAGTTTTAATAATCTGTGACTCCTGAGAGCCCATGGT
1121 TTTTTGACCTTGTGGTTCTAAAATTCCTTGTCTGACCCCTGTAGATCTTTTCCTTGCCATGTCACCTCCCTTGGCCTTTG
1201 ATCCTGGAAAGGTGGCAGAGCCTCCACTGAGCCAGGCCCAGAGCTCCTTGCAGTGCCTTCTTCCTTGTTTACCTGTGGGA
1281 GGAAACACTTTTTTTGTCAGGGGCAGCCTGGTTCAGAGCTCAGAGGTCACACTGTATCAAAGATCTCAAACAGCAAAGTC
1361 AGCATTTGCTGTATAGAGCTGCCACCCAACTCTAAGCAGGAGAAACTGTACAGAAAGGGCTTTGCTATTTTTCCCTTTTG
1441 GGAAAACAATGAAGTGTTTTAAGTCCTGGGTGGACTGAGAGATGGTTTGCCTGTCCAGACTTGCTCTCAAGCCTCATCCA
1521 GAGAAGGAGCTGCAGATGAGGGAGCCCGTACACTCCCTGCCACCACTAGGTTGTAAGCCTGTAGCTGGCTGGCTGATTTC
1601 ATTTTGGAATTCATTTGCCATCCACAGCCTTACACTAGGCACACACTTTAGAGTCTGGGGCTCCAGTGGGGCCCGCCTAA
1681 TTTTTTTTCCCCCCAAGACAGGGCCTTGCTCTGTCTCCCAGGCTGGAGTGCAGTGGCATGATCATGGCTTACTGCAGCCT
1761 TGATCTCCCAGGCTCAAGCGATCCTTCTGCCTCAGCCTCTCTGGTAGCTGAGACTGCATGCCCAGCTCCAAATCACCTTG
1841 ATTCATATCAGCAGTAATAATCACTTGTGTTCTGAAAGAAAGGGCACCAGAAGTTCTAGCAAAATTCAGTTGTGTTCTGT
1921 GAGCTAGCACTTTTTCCTCTGACCCAATTTTCTTACCTATAAAATGGTGATAAAAACCGACAGGTTGTTCAAAGGCCCAG
2001 ATCAGCTAAAGCATGTATATAAGAGCACGTTGTAAACTTGAAAGAGACAAAGGCACAAATGTGGCTGTTGATTAATTTGA
2081 CTGCTTCTCGTTGCTCGTCACCTCCATGCCAGGCACTGTGCTTGCTAATTGCTTTATGGGGGCATTCTCTTATTTATTCC
2161 CCAGCCCTGGGAAATAGGAGCTGTCATTATCCTTCTCTTTCTGCACAAGGAAAAATTAATGCCCTGAGAATTGTCATAAT
2241 TTTCCCAAGGCTGCCCAGCTGGTGGTGTTAAGCCAGAATTTGACCTCCCAGAGCCAGTTTCCATTAGCTGCCATGCTCTG
2321 CTGCCTCTAATTCACAGAATGCACTTTCTACCCTGTGTGCCATGGAGACCTCCTATGGAAAAATGATCAGCCACCTTACC
2401 TTCTACTGGGTACCTGCTGTGAGTCTGCCTATGCCAGAAGGATTAAGGAGGGGAGGTTACCCAAGAAACAAAGCCTACAT
2481 GCCGCTTACAGCCCCCGTTGGATGGTTGCTCAGTACAACAGTCTTGCATTCAGCAGGTGTTTGTTCATCACCTACTATGT
2561 GTCAGGCTCTATGCTAGGTACTGGGGATACAGGAGAGAATCAAGCGTAAAGTCTTTGTTCTCAAGGAATTTGCATTCTAG
2641 AAAGTAGAAGATGTAATAAATGTACTGTGGGACATGTTAATAAGTGCTATAAAGAAATATAAAGGGTTTGGGAGCAAAAA
2721 GAGGGAGTGGATCTATTTTAGATGAGCCCAGGTAAGACCTCTCTGAAGAGCTGTCATGAAGGAGGGAGGGAGCACATTCC
2801 TGGCAGAGAAAACAGCACGTGCAAAGGCCCCGAGACTGGAGTGTGTTCCTGAAGAGCAGCCAGGAGGCCAGCATGGCTGG
2881 AGAGGCAGGCATAGGCAGGGAACCGAGCAGCAGGTCAGAGCAGGCGAGCTGACATTCTGCAGCCTGGACGGCCATGGCAG
2961 GAAGCTTTTAGTTGGAGAGATACAGGAAGCCTCCTAGGGTTCTGAGCAGAAGAGGGGCATGAGCTGATTCACATTCTGAA
3041 GGACCTCTCTAGCTGGCCAGTGCTGAGGAGGTTGGAGAGAGAAAGGGTGAAAGCAGAGAGACCAGTGCAGGGCTGTTAAC
3121 AGGGTTGCAGGCGAGAGACTGGGGTGCTGGGCTCCCCTAGACTAGGACTCCAGTGCCCTCCTCTCCCAAGAGACAAAGGC
3201 CATTGCATTGAAGGAGGTGGGAAATGATTAGATTCTGAACATATGTAATTATTTTTCAGTCTTTTTCAAAGATACAAATA
3281 TTTACATAGTTTTAATCATGTAATATATACAATTTAATGTCCTAGTGTTTTACTTAATAGTGTATCATGTTTTCCCTGTT
3361 GGTATGTAGCCTGGATAAATGCTCTTAATTATAAAAAATTCTGTCGAGGAGTGTTCCATAGTTTATTGTTTTCCTATTAT
3441 GAGAATTTAGGCCAAGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGCGAGGCCGAGGTGGGCAGATCACTTGAGGT
3521 GAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAATTATCTCTACTAAAAATACAAAAAAATAATAATAATAGCCAGGCG
3601 TGGTGGCACATGCCTGTATTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGTGGAGGTTGCA
3681 GTGAGCCGAGATGGTGCCACTGCATTCCAGCCTGGGCAACAGAGCGAGACTCCATCTCAAAAAAAAGGAGACTTCATGTG
3761 CCCCCAATTTTTCACTATTGTTATTTGAAAAAATATTTTTATTTGTAAGAGTTTTTCTTTATTTAAAATGTTCATTAATA
3841 AAGTTGTTGGACGGGAAGCAAAAAAAAAAAGTTGTTTAAGATAAATTCCCAGAAGTGAATTTGTTAGATCAAACACTTAA
3921 AACTTTTTGTTATGGAAGAATTCAAATATAAATAAAAAATTGTGAGTAATAAAATGAACTCACAGTTTCAACAATGACCC
4001 ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaCGUGUCUGUUGUCUUCCUu 5'
            || :| :|  |||||||| 
Target 5' ctGCCTATGC--CAGAAGGAt 3'
 2425 - 2443 151.00 -14.20
2 
miRNA  3' gacGUGUCUGUUGUCUUCCUu 5'
             | ||  ||: ||||||| 
Target 5' agcCTCATCCAG-AGAAGGAg 3'
 1510 - 1529 149.00 -11.90
3 
miRNA  3' gacgugUCUGUUGUCUUCCUu 5'
                ||  || |||:||| 
Target 5' tttgggAGCAAAAAGAGGGAg 3'
 2707 - 2727 135.00 -11.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30491574 25 COSMIC
COSN30469613 47 COSMIC
COSN30101313 50 COSMIC
COSN30119683 94 COSMIC
COSN30121169 102 COSMIC
COSN30150261 123 COSMIC
COSN31516992 417 COSMIC
COSN31545791 488 COSMIC
COSN31546560 580 COSMIC
COSN26562284 589 COSMIC
COSN21574184 881 COSMIC
COSN15928714 894 COSMIC
COSN21602452 932 COSMIC
COSN8995110 986 COSMIC
COSN28202096 1010 COSMIC
COSN1869714 1027 COSMIC
COSN9125734 1267 COSMIC
COSN32062948 1722 COSMIC
COSN27629014 1785 COSMIC
COSN21345936 2117 COSMIC
COSN29195785 2121 COSMIC
COSN17183021 2513 COSMIC
COSN20079636 2872 COSMIC
COSN30116686 2998 COSMIC
COSN31606398 3001 COSMIC
COSN30702150 3016 COSMIC
COSN31512678 3016 COSMIC
COSN30109868 3042 COSMIC
COSN26584368 3064 COSMIC
COSN30522339 3066 COSMIC
COSN30495605 3067 COSMIC
COSN31610511 3086 COSMIC
COSN30478663 3114 COSMIC
COSN2378757 3139 COSMIC
COSN1869716 3159 COSMIC
COSN20079773 3173 COSMIC
COSN31500788 3187 COSMIC
COSN30123036 3219 COSMIC
COSN22256201 3241 COSMIC
COSN17382417 3310 COSMIC
COSN5442914 3334 COSMIC
COSN21672199 3624 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs760860002 2 dbSNP
rs369814048 9 dbSNP
rs200160144 10 dbSNP
rs759461335 12 dbSNP
rs1271113726 13 dbSNP
rs760130403 13 dbSNP
rs1339221574 14 dbSNP
rs919249163 21 dbSNP
rs939899363 23 dbSNP
rs1037063682 25 dbSNP
rs747826249 26 dbSNP
rs765226682 31 dbSNP
rs769769211 32 dbSNP
rs1057216369 35 dbSNP
rs1431832184 39 dbSNP
rs372843982 52 dbSNP
rs1186877921 55 dbSNP
rs1472383837 73 dbSNP
rs1235533995 74 dbSNP
rs550384798 90 dbSNP
rs568677693 91 dbSNP
rs1206272926 94 dbSNP
rs17123085 100 dbSNP
rs1273352708 103 dbSNP
rs1227386967 107 dbSNP
rs775419913 112 dbSNP
rs551293268 114 dbSNP
rs566753488 123 dbSNP
rs1350458540 124 dbSNP
rs1306242182 125 dbSNP
rs1000054382 126 dbSNP
rs1000388757 143 dbSNP
rs1164273103 150 dbSNP
rs1403833090 159 dbSNP
rs533976527 161 dbSNP
rs59745045 162 dbSNP
rs1010438752 174 dbSNP
rs1251063002 176 dbSNP
rs1179381990 179 dbSNP
rs1020613901 180 dbSNP
rs527710695 187 dbSNP
rs1232968359 188 dbSNP
rs1220312761 199 dbSNP
rs1029381698 202 dbSNP
rs1455770522 207 dbSNP
rs1319978093 208 dbSNP
rs574051612 210 dbSNP
rs1389393560 214 dbSNP
rs1437929360 216 dbSNP
rs763305158 217 dbSNP
rs976352830 221 dbSNP
rs74585664 223 dbSNP
rs774584748 224 dbSNP
rs1293045735 242 dbSNP
rs192530454 250 dbSNP
rs973625584 252 dbSNP
rs983993592 256 dbSNP
rs929254934 263 dbSNP
rs1313588437 264 dbSNP
rs182089964 270 dbSNP
rs939953986 277 dbSNP
rs948794626 282 dbSNP
rs1044263799 283 dbSNP
rs1487288557 286 dbSNP
rs1254561628 295 dbSNP
rs1214706168 299 dbSNP
rs1464679247 302 dbSNP
rs1266647158 310 dbSNP
rs1211078675 311 dbSNP
rs1318087016 315 dbSNP
rs1210555999 324 dbSNP
rs1300645412 324 dbSNP
rs1036953972 325 dbSNP
rs1488066171 330 dbSNP
rs1304355391 331 dbSNP
rs935938724 342 dbSNP
rs1387576013 353 dbSNP
rs1191548920 376 dbSNP
rs1426922942 380 dbSNP
rs1052927237 386 dbSNP
rs1174734672 391 dbSNP
rs534366720 400 dbSNP
rs1158642784 409 dbSNP
rs545615546 417 dbSNP
rs1448529577 429 dbSNP
rs1246538140 441 dbSNP
rs1188705181 450 dbSNP
rs1412831978 452 dbSNP
rs560806847 463 dbSNP
rs1044769575 466 dbSNP
rs997841558 468 dbSNP
rs1208646248 473 dbSNP
rs572660326 478 dbSNP
rs905969166 486 dbSNP
rs1281154850 491 dbSNP
rs1322201039 502 dbSNP
rs936068721 507 dbSNP
rs1029740736 509 dbSNP
rs1054661425 510 dbSNP
rs889567909 511 dbSNP
rs1007038981 512 dbSNP
rs1302128275 516 dbSNP
rs372372820 518 dbSNP
rs879034593 521 dbSNP
rs561699661 525 dbSNP
rs1376694367 526 dbSNP
rs1017787068 528 dbSNP
rs1428676959 533 dbSNP
rs1019164842 538 dbSNP
rs139595923 541 dbSNP
rs973655289 548 dbSNP
rs1026536287 559 dbSNP
rs997826763 560 dbSNP
rs1486959385 564 dbSNP
rs1258280308 572 dbSNP
rs760909561 578 dbSNP
rs1204587125 583 dbSNP
rs1028389659 584 dbSNP
rs550298820 590 dbSNP
rs1253373825 593 dbSNP
rs867671602 608 dbSNP
rs984270637 615 dbSNP
rs992864728 622 dbSNP
rs1311773431 623 dbSNP
rs1394182607 630 dbSNP
rs1016645044 639 dbSNP
rs562225546 640 dbSNP
rs1312939287 643 dbSNP
rs961207302 652 dbSNP
rs756757778 658 dbSNP
rs1222140637 659 dbSNP
rs972531360 669 dbSNP
rs145111420 670 dbSNP
rs980569854 679 dbSNP
rs1181780686 686 dbSNP
rs1252787121 687 dbSNP
rs925811289 695 dbSNP
rs1163170547 701 dbSNP
rs1473647354 704 dbSNP
rs186584590 709 dbSNP
rs980153202 716 dbSNP
rs1161531666 726 dbSNP
rs1181547174 732 dbSNP
rs761160725 733 dbSNP
rs936136479 741 dbSNP
rs1488298428 744 dbSNP
rs769130149 745 dbSNP
rs1406479324 748 dbSNP
rs1054954074 749 dbSNP
rs1231284803 756 dbSNP
rs1336844590 769 dbSNP
rs1293759011 778 dbSNP
rs1227723235 784 dbSNP
rs891754603 785 dbSNP
rs1330341909 786 dbSNP
rs891849149 793 dbSNP
rs1391581730 795 dbSNP
rs1389629745 810 dbSNP
rs1292134323 811 dbSNP
rs566661630 830 dbSNP
rs933892462 835 dbSNP
rs1429482806 836 dbSNP
rs766895559 846 dbSNP
rs534043658 847 dbSNP
rs1471910669 855 dbSNP
rs1040497640 861 dbSNP
rs902128179 864 dbSNP
rs1365571262 868 dbSNP
rs996819616 869 dbSNP
rs549130561 870 dbSNP
rs1350722107 873 dbSNP
rs746255444 875 dbSNP
rs777102785 876 dbSNP
rs1028022974 877 dbSNP
rs1265611843 883 dbSNP
rs889447725 894 dbSNP
rs1005183827 904 dbSNP
rs1017108074 905 dbSNP
rs567762517 914 dbSNP
rs567616043 915 dbSNP
rs1281938231 922 dbSNP
rs113611428 923 dbSNP
rs1017057544 925 dbSNP
rs961091589 927 dbSNP
rs1239213424 943 dbSNP
rs1330143910 951 dbSNP
rs1377748975 952 dbSNP
rs1442671091 988 dbSNP
rs972583337 994 dbSNP
rs1320344853 996 dbSNP
rs1456085434 1008 dbSNP
rs1387843741 1015 dbSNP
rs1024130639 1017 dbSNP
rs1465546962 1018 dbSNP
rs971335884 1035 dbSNP
rs1376010585 1036 dbSNP
rs538227825 1040 dbSNP
rs980422395 1041 dbSNP
rs766799420 1042 dbSNP
rs1195679697 1046 dbSNP
rs995041419 1048 dbSNP
rs927190856 1050 dbSNP
rs1187753309 1053 dbSNP
rs1445197739 1060 dbSNP
rs1339865768 1066 dbSNP
rs1286340682 1071 dbSNP
rs556722172 1085 dbSNP
rs578138413 1086 dbSNP
rs936009783 1097 dbSNP
rs1277607365 1106 dbSNP
rs539245774 1113 dbSNP
rs754173599 1118 dbSNP
rs1297300877 1137 dbSNP
rs1429141333 1148 dbSNP
rs755284909 1159 dbSNP
rs192463307 1167 dbSNP
rs1473145995 1174 dbSNP
rs1373667384 1175 dbSNP
rs1184159355 1182 dbSNP
rs1435546091 1185 dbSNP
rs1389847133 1187 dbSNP
rs1167722945 1189 dbSNP
rs1040549880 1190 dbSNP
rs147575415 1195 dbSNP
rs1243647468 1197 dbSNP
rs926072602 1211 dbSNP
rs56245555 1212 dbSNP
rs1254740307 1219 dbSNP
rs1212464115 1223 dbSNP
rs932291056 1226 dbSNP
rs1273375706 1231 dbSNP
rs1212453581 1240 dbSNP
rs1341848720 1250 dbSNP
rs988629188 1252 dbSNP
rs1051126880 1259 dbSNP
rs1411321468 1260 dbSNP
rs913053877 1261 dbSNP
rs554951350 1263 dbSNP
rs1314822317 1268 dbSNP
rs1005647616 1273 dbSNP
rs34888967 1289 dbSNP
rs1358111550 1299 dbSNP
rs1051432108 1308 dbSNP
rs573612814 1315 dbSNP
rs1327033270 1327 dbSNP
rs1038022810 1329 dbSNP
rs1317146861 1330 dbSNP
rs896934337 1334 dbSNP
rs910894844 1339 dbSNP
rs1362940970 1340 dbSNP
rs942327930 1359 dbSNP
rs1415667142 1375 dbSNP
rs1189982292 1386 dbSNP
rs1485678320 1390 dbSNP
rs1250450075 1393 dbSNP
rs1201954558 1400 dbSNP
rs1439232887 1401 dbSNP
rs1274124694 1407 dbSNP
rs543805422 1409 dbSNP
rs1038034582 1410 dbSNP
rs751153243 1412 dbSNP
rs562281752 1422 dbSNP
rs532820180 1428 dbSNP
rs1295580869 1439 dbSNP
rs1227491198 1455 dbSNP
rs1024181594 1458 dbSNP
rs898270727 1461 dbSNP
rs544804793 1464 dbSNP
rs1277888895 1465 dbSNP
rs1341154790 1465 dbSNP
rs1444600794 1467 dbSNP
rs1198984496 1468 dbSNP
rs993902832 1470 dbSNP
rs1329287145 1476 dbSNP
rs1460663353 1477 dbSNP
rs1278151390 1478 dbSNP
rs1443132885 1480 dbSNP
rs1166946509 1481 dbSNP
rs1475510887 1483 dbSNP
rs1205636358 1485 dbSNP
rs1406567267 1486 dbSNP
rs1047936818 1490 dbSNP
rs886581781 1493 dbSNP
rs971219293 1501 dbSNP
rs1233168566 1504 dbSNP
rs1220381958 1507 dbSNP
rs1001344182 1510 dbSNP
rs6087842 1514 dbSNP
rs1214822915 1518 dbSNP
rs1034694967 1522 dbSNP
rs146918751 1527 dbSNP
rs1329124083 1528 dbSNP
rs1304937426 1537 dbSNP
rs957288334 1543 dbSNP
rs1374148301 1545 dbSNP
rs990580962 1548 dbSNP
rs913223718 1549 dbSNP
rs1368461311 1553 dbSNP
rs1327715163 1554 dbSNP
rs967470418 1556 dbSNP
rs1001980108 1557 dbSNP
rs780740103 1558 dbSNP
rs976135550 1572 dbSNP
rs1156306772 1579 dbSNP
rs1424014849 1592 dbSNP
rs1408090224 1593 dbSNP
rs560263635 1596 dbSNP
rs1338141354 1614 dbSNP
rs1385736657 1617 dbSNP
rs527606252 1619 dbSNP
rs550364167 1633 dbSNP
rs1050592940 1634 dbSNP
rs909478086 1635 dbSNP
rs549292658 1641 dbSNP
rs1259558268 1647 dbSNP
rs1218570392 1648 dbSNP
rs745866949 1650 dbSNP
rs1278042193 1656 dbSNP
rs1321100203 1659 dbSNP
rs1232326188 1660 dbSNP
rs1350384200 1661 dbSNP
rs896820522 1666 dbSNP
rs1305341686 1667 dbSNP
rs762116000 1668 dbSNP
rs993793019 1673 dbSNP
rs1045513949 1674 dbSNP
rs149031311 1675 dbSNP
rs1345227175 1676 dbSNP
rs553317905 1681 dbSNP
rs913087967 1681 dbSNP
rs1001795140 1684 dbSNP
rs1345980671 1686 dbSNP
rs1034170756 1689 dbSNP
rs1428226263 1689 dbSNP
rs8122822 1690 dbSNP
rs957547122 1698 dbSNP
rs986745274 1699 dbSNP
rs1208893270 1706 dbSNP
rs1464465938 1707 dbSNP
rs1209945995 1714 dbSNP
rs1011441096 1716 dbSNP
rs1020281645 1717 dbSNP
rs1450303969 1722 dbSNP
rs41288632 1723 dbSNP
rs942612573 1733 dbSNP
rs976026205 1734 dbSNP
rs1038070562 1735 dbSNP
rs1362638505 1738 dbSNP
rs919561210 1742 dbSNP
rs923375293 1745 dbSNP
rs1412460651 1746 dbSNP
rs1376753405 1750 dbSNP
rs1478160498 1756 dbSNP
rs780041738 1778 dbSNP
rs1461196793 1780 dbSNP
rs571773700 1781 dbSNP
rs1371664138 1785 dbSNP
rs909372824 1792 dbSNP
rs942314623 1796 dbSNP
rs8122880 1800 dbSNP
rs41288634 1802 dbSNP
rs1429613363 1804 dbSNP
rs1456223897 1806 dbSNP
rs189783017 1806 dbSNP
rs193023120 1809 dbSNP
rs1046807367 1811 dbSNP
rs184581089 1815 dbSNP
rs189336614 1824 dbSNP
rs1243919644 1841 dbSNP
rs1014869421 1848 dbSNP
rs536426284 1849 dbSNP
rs929643266 1855 dbSNP
rs1045403961 1857 dbSNP
rs6058573 1864 dbSNP
rs1286646880 1866 dbSNP
rs937095781 1870 dbSNP
rs539338185 1883 dbSNP
rs1056068714 1885 dbSNP
rs1292532477 1890 dbSNP
rs752661137 1898 dbSNP
rs892967899 1905 dbSNP
rs1356767285 1909 dbSNP
rs758651407 1910 dbSNP
rs1229068183 1912 dbSNP
rs1001782811 1922 dbSNP
rs749118925 1934 dbSNP
rs1300260276 1939 dbSNP
rs903084748 1948 dbSNP
rs997496446 1958 dbSNP
rs1163343611 1964 dbSNP
rs367983382 1979 dbSNP
rs1268523635 1980 dbSNP
rs1421789755 1983 dbSNP
rs1417545288 1984 dbSNP
rs1490932260 1987 dbSNP
rs1201190515 1991 dbSNP
rs151227331 1993 dbSNP
rs555691087 1996 dbSNP
rs8122976 1997 dbSNP
rs1272347844 2014 dbSNP
rs1211705635 2015 dbSNP
rs955478383 2018 dbSNP
rs1181906659 2020 dbSNP
rs1364963656 2027 dbSNP
rs577338423 2030 dbSNP
rs1308622442 2037 dbSNP
rs1391636927 2041 dbSNP
rs987079648 2057 dbSNP
rs1018091609 2058 dbSNP
rs1463457215 2059 dbSNP
rs764177716 2061 dbSNP
rs1158067655 2062 dbSNP
rs141223071 2067 dbSNP
rs1451642962 2068 dbSNP
rs1300754920 2069 dbSNP
rs41288636 2080 dbSNP
rs1182746819 2082 dbSNP
rs1016721249 2090 dbSNP
rs181994021 2091 dbSNP
rs1426291637 2096 dbSNP
rs982436207 2097 dbSNP
rs1350098370 2098 dbSNP
rs1410596360 2104 dbSNP
rs972194846 2111 dbSNP
rs949144407 2121 dbSNP
rs140363751 2136 dbSNP
rs949599627 2141 dbSNP
rs937613282 2152 dbSNP
rs1054598877 2154 dbSNP
rs981134934 2171 dbSNP
rs1244745396 2175 dbSNP
rs748345599 2178 dbSNP
rs1020242253 2184 dbSNP
rs145488524 2198 dbSNP
rs6058574 2203 dbSNP
rs6119785 2210 dbSNP
rs572728855 2213 dbSNP
rs947240998 2218 dbSNP
rs963871401 2224 dbSNP
rs973993394 2228 dbSNP
rs1175761677 2234 dbSNP
rs1455373697 2235 dbSNP
rs1041513292 2237 dbSNP
rs376853385 2239 dbSNP
rs1026935794 2257 dbSNP
rs903135588 2259 dbSNP
rs773280306 2268 dbSNP
rs997380390 2269 dbSNP
rs550222188 2272 dbSNP
rs982467280 2283 dbSNP
rs73903581 2295 dbSNP
rs889123575 2297 dbSNP
rs1236063961 2299 dbSNP
rs761213610 2315 dbSNP
rs1346097223 2341 dbSNP
rs533819738 2353 dbSNP
rs749236805 2354 dbSNP
rs137998077 2360 dbSNP
rs62207424 2363 dbSNP
rs1315068956 2364 dbSNP
rs1415226533 2371 dbSNP
rs993692553 2376 dbSNP
rs1054545955 2389 dbSNP
rs1026472834 2390 dbSNP
rs754596520 2393 dbSNP
rs1395506785 2396 dbSNP
rs893431149 2402 dbSNP
rs759820585 2406 dbSNP
rs1314142685 2412 dbSNP
rs946285846 2414 dbSNP
rs1474625947 2419 dbSNP
rs1254741884 2421 dbSNP
rs1212622051 2424 dbSNP
rs1442594566 2426 dbSNP
rs1272762242 2430 dbSNP
rs547900613 2432 dbSNP
rs1341908207 2434 dbSNP
rs971004560 2443 dbSNP
rs1233188193 2448 dbSNP
rs1353685751 2456 dbSNP
rs117907228 2457 dbSNP
rs566040789 2461 dbSNP
rs1354096375 2468 dbSNP
rs1297348788 2471 dbSNP
rs1327941637 2475 dbSNP
rs1408064700 2476 dbSNP
rs1018324189 2480 dbSNP
rs899909014 2485 dbSNP
rs536894836 2487 dbSNP
rs751227378 2490 dbSNP
rs995377261 2492 dbSNP
rs926829946 2493 dbSNP
rs1252678173 2495 dbSNP
rs958406225 2496 dbSNP
rs756930425 2497 dbSNP
rs554820961 2498 dbSNP
rs570014419 2505 dbSNP
rs1439970683 2513 dbSNP
rs991534173 2514 dbSNP
rs1025080365 2519 dbSNP
rs766974733 2532 dbSNP
rs1243149299 2533 dbSNP
rs1333266834 2541 dbSNP
rs529403523 2547 dbSNP
rs1228894622 2555 dbSNP
rs1372693016 2556 dbSNP
rs1278058228 2557 dbSNP
rs142901592 2558 dbSNP
rs980939507 2570 dbSNP
rs926429839 2572 dbSNP
rs1392123244 2575 dbSNP
rs947124900 2577 dbSNP
rs1405505427 2586 dbSNP
rs1406583171 2587 dbSNP
rs1041566226 2592 dbSNP
rs1389357739 2593 dbSNP
rs541477390 2598 dbSNP
rs1239196204 2603 dbSNP
rs145049524 2605 dbSNP
rs577251922 2606 dbSNP
rs186519409 2607 dbSNP
rs1222928944 2608 dbSNP
rs1316460176 2608 dbSNP
rs376251949 2615 dbSNP
rs1038091086 2624 dbSNP
rs1309724565 2626 dbSNP
rs899279138 2629 dbSNP
rs1439985021 2638 dbSNP
rs1368502844 2646 dbSNP
rs1295273778 2648 dbSNP
rs1437070529 2648 dbSNP
rs993574813 2652 dbSNP
rs1421150583 2660 dbSNP
rs1380459162 2661 dbSNP
rs780174670 2663 dbSNP
rs138762395 2667 dbSNP
rs542809941 2669 dbSNP
rs899941615 2674 dbSNP
rs1192322562 2678 dbSNP
rs533483298 2679 dbSNP
rs1033948921 2681 dbSNP
rs1485802339 2686 dbSNP
rs1048271810 2699 dbSNP
rs959871216 2699 dbSNP
rs1488657597 2706 dbSNP
rs886917148 2707 dbSNP
rs1340525487 2713 dbSNP
rs1279956367 2720 dbSNP
rs1216675437 2723 dbSNP
rs1232345074 2728 dbSNP
rs1297356880 2735 dbSNP
rs1303087229 2736 dbSNP
rs188218035 2736 dbSNP
rs544435217 2737 dbSNP
rs1263245179 2747 dbSNP
rs1286616436 2749 dbSNP
rs1401380546 2752 dbSNP
rs971045086 2753 dbSNP
rs1311941287 2759 dbSNP
rs1206791525 2769 dbSNP
rs368694498 2771 dbSNP
rs754743150 2772 dbSNP
rs1486107196 2777 dbSNP
rs1418076184 2778 dbSNP
rs1428450680 2778 dbSNP
rs778759869 2788 dbSNP
rs576422290 2793 dbSNP
rs6087843 2795 dbSNP
rs1196456796 2801 dbSNP
rs543776814 2806 dbSNP
rs148042194 2809 dbSNP
rs1264926580 2812 dbSNP
rs1484331817 2818 dbSNP
rs565157842 2819 dbSNP
rs1210479589 2820 dbSNP
rs1306702373 2827 dbSNP
rs977141560 2828 dbSNP
rs1220365955 2830 dbSNP
rs181028344 2832 dbSNP
rs914742863 2833 dbSNP
rs772308834 2840 dbSNP
rs1380811277 2842 dbSNP
rs149350926 2846 dbSNP
rs1461850772 2850 dbSNP
rs1346302744 2855 dbSNP
rs1353100092 2859 dbSNP
rs1433421178 2859 dbSNP
rs1292161316 2861 dbSNP
rs1417278188 2865 dbSNP
rs910496059 2876 dbSNP
rs1185823717 2881 dbSNP
rs1367284372 2885 dbSNP
rs559803233 2886 dbSNP
rs943270211 2892 dbSNP
rs1283492792 2896 dbSNP
rs773332215 2905 dbSNP
rs944268817 2906 dbSNP
rs899163389 2924 dbSNP
rs186530633 2926 dbSNP
rs747119538 2927 dbSNP
rs1048469648 2939 dbSNP
rs1313053008 2942 dbSNP
rs886949767 2950 dbSNP
rs906587064 2951 dbSNP
rs770927967 2954 dbSNP
rs1394305667 2968 dbSNP
rs1488016143 2971 dbSNP
rs1003733815 2973 dbSNP
rs1034250118 2977 dbSNP
rs895432937 2982 dbSNP
rs548783492 2984 dbSNP
rs1181556264 2986 dbSNP
rs1408736910 2992 dbSNP
rs1417511765 2993 dbSNP
rs1236155798 3013 dbSNP
rs1180210306 3014 dbSNP
rs777131569 3016 dbSNP
rs968361535 3018 dbSNP
rs1207970108 3019 dbSNP
rs1402975695 3020 dbSNP
rs1163244065 3032 dbSNP
rs1237907962 3034 dbSNP
rs1350980426 3037 dbSNP
rs1311923921 3045 dbSNP
rs1349704947 3050 dbSNP
rs1324528484 3058 dbSNP
rs569879353 3059 dbSNP
rs906476562 3064 dbSNP
rs537230680 3072 dbSNP
rs375957703 3084 dbSNP
rs1230894687 3089 dbSNP
rs561988370 3092 dbSNP
rs753497783 3095 dbSNP
rs762548284 3104 dbSNP
rs1288308721 3105 dbSNP
rs369143833 3106 dbSNP
rs1382326932 3108 dbSNP
rs1159463788 3111 dbSNP
rs751305441 3112 dbSNP
rs756955616 3116 dbSNP
rs1452949077 3118 dbSNP
rs1247025737 3123 dbSNP
rs1463218729 3125 dbSNP
rs780630655 3128 dbSNP
rs1033322809 3129 dbSNP
rs754256995 3130 dbSNP
rs1477424443 3131 dbSNP
rs191192342 3133 dbSNP
rs1020692431 3134 dbSNP
rs779493641 3134 dbSNP
rs377488657 3138 dbSNP
rs759158523 3140 dbSNP
rs772238882 3141 dbSNP
rs1437490280 3142 dbSNP
rs1321505463 3143 dbSNP
rs1330562695 3146 dbSNP
rs540451624 3147 dbSNP
rs1277109615 3152 dbSNP
rs987353358 3157 dbSNP
rs369204612 3158 dbSNP
rs1228320842 3160 dbSNP
rs747292939 3165 dbSNP
rs1236093531 3168 dbSNP
rs765619793 3177 dbSNP
rs965670195 3178 dbSNP
rs771140373 3180 dbSNP
rs776769146 3181 dbSNP
rs759389652 3182 dbSNP
rs769427912 3184 dbSNP
rs753067707 3198 dbSNP
rs144664105 3200 dbSNP
rs183492011 3201 dbSNP
rs1325784923 3202 dbSNP
rs763753162 3208 dbSNP
rs1299079529 3215 dbSNP
rs751109062 3217 dbSNP
rs1390364714 3222 dbSNP
rs761338048 3223 dbSNP
rs921268839 3230 dbSNP
rs78443180 3234 dbSNP
rs1331768155 3237 dbSNP
rs1293586300 3238 dbSNP
rs17123088 3245 dbSNP
rs1378200370 3256 dbSNP
rs760071503 3267 dbSNP
rs1047738045 3268 dbSNP
rs906644295 3272 dbSNP
rs1264667756 3274 dbSNP
rs1216924878 3276 dbSNP
rs908667932 3287 dbSNP
rs1233556331 3291 dbSNP
rs940083054 3301 dbSNP
rs563085385 3303 dbSNP
rs142649615 3305 dbSNP
rs576334401 3311 dbSNP
rs543641527 3325 dbSNP
rs1055336430 3326 dbSNP
rs906332801 3333 dbSNP
rs937943123 3335 dbSNP
rs77666766 3341 dbSNP
rs78617932 3342 dbSNP
rs1338856164 3344 dbSNP
rs1054931507 3348 dbSNP
rs1336398469 3355 dbSNP
rs895305316 3363 dbSNP
rs1416019526 3373 dbSNP
rs1402614720 3374 dbSNP
rs1167301720 3375 dbSNP
rs1463964710 3385 dbSNP
rs1425177789 3387 dbSNP
rs1193678331 3388 dbSNP
rs1235445153 3393 dbSNP
rs893715600 3393 dbSNP
rs1445691094 3397 dbSNP
rs567065958 3402 dbSNP
rs1011039386 3407 dbSNP
rs1022515064 3412 dbSNP
rs1010566154 3417 dbSNP
rs185923617 3419 dbSNP
rs73108527 3420 dbSNP
rs553428837 3421 dbSNP
rs954521835 3426 dbSNP
rs987626143 3428 dbSNP
rs965890390 3432 dbSNP
rs767298813 3433 dbSNP
rs964910866 3437 dbSNP
rs368069970 3440 dbSNP
rs1443721842 3441 dbSNP
rs952939605 3442 dbSNP
rs1171289268 3458 dbSNP
rs1402283643 3458 dbSNP
rs984146809 3458 dbSNP
rs1404302977 3459 dbSNP
rs1410955148 3465 dbSNP
rs973205354 3469 dbSNP
rs920529706 3471 dbSNP
rs1164670290 3487 dbSNP
rs559457882 3492 dbSNP
rs1246549011 3493 dbSNP
rs1459366850 3498 dbSNP
rs750057995 3499 dbSNP
rs1316923353 3502 dbSNP
rs1449977293 3507 dbSNP
rs1339758026 3509 dbSNP
rs760268384 3513 dbSNP
rs771789279 3517 dbSNP
rs765929454 3522 dbSNP
rs1273950514 3532 dbSNP
rs1439694012 3540 dbSNP
rs1208641602 3548 dbSNP
rs982563231 3549 dbSNP
rs1332010681 3560 dbSNP
rs1461812832 3575 dbSNP
rs927825428 3578 dbSNP
rs753778625 3580 dbSNP
rs937874574 3580 dbSNP
rs190613659 3583 dbSNP
rs1388512521 3584 dbSNP
rs983485452 3588 dbSNP
rs915180956 3592 dbSNP
rs1167049996 3599 dbSNP
rs927950784 3600 dbSNP
rs946622331 3601 dbSNP
rs1419972861 3602 dbSNP
rs1222311160 3603 dbSNP
rs1446493202 3610 dbSNP
rs1284210444 3612 dbSNP
rs1219042267 3628 dbSNP
rs1355632998 3640 dbSNP
rs1042048797 3643 dbSNP
rs1218594462 3647 dbSNP
rs1365326670 3650 dbSNP
rs1276542733 3659 dbSNP
rs1436645292 3663 dbSNP
rs1411520664 3667 dbSNP
rs1359328682 3669 dbSNP
rs897295809 3671 dbSNP
rs1421096555 3673 dbSNP
rs1008650849 3675 dbSNP
rs1452689506 3676 dbSNP
rs1431949435 3677 dbSNP
rs939327820 3688 dbSNP
rs1192264779 3701 dbSNP
rs1040493731 3705 dbSNP
rs900242791 3706 dbSNP
rs1196151271 3708 dbSNP
rs1488708267 3710 dbSNP
rs1055625131 3722 dbSNP
rs754943068 3726 dbSNP
rs548309356 3727 dbSNP
rs946902431 3731 dbSNP
rs1043853662 3732 dbSNP
rs1338169741 3737 dbSNP
rs1275702073 3739 dbSNP
rs772693214 3739 dbSNP
rs952971898 3739 dbSNP
rs1005780849 3746 dbSNP
rs1301891995 3755 dbSNP
rs1464905923 3759 dbSNP
rs902800116 3765 dbSNP
rs768272718 3766 dbSNP
rs1429605418 3768 dbSNP
rs1421595949 3769 dbSNP
rs1015616537 3776 dbSNP
rs879454490 3778 dbSNP
rs1052760004 3781 dbSNP
rs1482177259 3788 dbSNP
rs1341903050 3794 dbSNP
rs1238949696 3802 dbSNP
rs961638670 3806 dbSNP
rs563301067 3808 dbSNP
rs982124544 3814 dbSNP
rs1220009443 3815 dbSNP
rs760775660 3815 dbSNP
rs1324927156 3834 dbSNP
rs183187012 3835 dbSNP
rs531055687 3853 dbSNP
rs1303733683 3854 dbSNP
rs1446705399 3856 dbSNP
rs1205590559 3858 dbSNP
rs1398828730 3860 dbSNP
rs544298361 3860 dbSNP
rs928076503 3860 dbSNP
rs75093980 3861 dbSNP
rs990641633 3871 dbSNP
rs915046978 3878 dbSNP
rs1246281091 3883 dbSNP
rs1415708797 3885 dbSNP
rs1183897941 3896 dbSNP
rs867617077 3899 dbSNP
rs552343329 3906 dbSNP
rs62207425 3913 dbSNP
rs1480694369 3914 dbSNP
rs1476258663 3921 dbSNP
rs147306647 3924 dbSNP
rs923639282 3925 dbSNP
rs944405158 3927 dbSNP
rs1040038049 3928 dbSNP
rs1315308482 3930 dbSNP
rs187917402 3933 dbSNP
rs1334000198 3939 dbSNP
rs995915012 3955 dbSNP
rs1049936104 3963 dbSNP
rs1291799409 3968 dbSNP
rs1385808630 3969 dbSNP
rs994698117 3970 dbSNP
rs1027481483 3971 dbSNP
rs1438903781 3973 dbSNP
rs1378213750 3984 dbSNP
rs1180461989 3990 dbSNP
rs1419548480 3991 dbSNP
rs1381224489 3998 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000375749.3 | 3UTR | UCAAGCCUCAUCCAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000375749.3 | 3UTR | UCAAGCCUCAUCCAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
178 hsa-miR-6868-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT107800 SLC1A1 solute carrier family 1 member 1 2 2
MIRT164443 CPEB2 cytoplasmic polyadenylation element binding protein 2 2 2
MIRT180168 NOTCH2 notch 2 2 2
MIRT363961 IMPAD1 inositol monophosphatase domain containing 1 2 2
MIRT445561 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT468817 RSRC2 arginine and serine rich coiled-coil 2 2 4
MIRT475452 HSPA8 heat shock protein family A (Hsp70) member 8 2 6
MIRT478206 DDX6 DEAD-box helicase 6 2 2
MIRT506235 PEX13 peroxisomal biogenesis factor 13 2 4
MIRT507651 CREBRF CREB3 regulatory factor 2 4
MIRT509448 CAPRIN1 cell cycle associated protein 1 2 4
MIRT520196 WASL Wiskott-Aldrich syndrome like 2 2
MIRT521020 SLC38A1 solute carrier family 38 member 1 2 4
MIRT526334 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT527175 LRRTM4 leucine rich repeat transmembrane neuronal 4 2 2
MIRT527348 FAM69C family with sequence similarity 69 member C 2 2
MIRT527514 FOXB1 forkhead box B1 2 4
MIRT527955 MTAP methylthioadenosine phosphorylase 2 2
MIRT528474 STAMBPL1 STAM binding protein like 1 2 2
MIRT528929 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT531496 NONO non-POU domain containing octamer binding 2 2
MIRT531608 ACP1 acid phosphatase 1, soluble 2 2
MIRT535579 NUP35 nucleoporin 35 2 2
MIRT536158 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 6
MIRT536194 MAML2 mastermind like transcriptional coactivator 2 2 2
MIRT549649 RSL1D1 ribosomal L1 domain containing 1 2 2
MIRT551819 TMEM138 transmembrane protein 138 2 2
MIRT557174 HOXA11 homeobox A11 2 2
MIRT558889 CCND2 cyclin D2 2 2
MIRT559109 C16orf52 chromosome 16 open reading frame 52 2 2
MIRT569341 EFHC1 EF-hand domain containing 1 2 2
MIRT608169 ERBB2 erb-b2 receptor tyrosine kinase 2 2 2
MIRT609642 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT610274 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT611130 CTBP2 C-terminal binding protein 2 2 2
MIRT611350 KIAA2018 upstream transcription factor family member 3 2 2
MIRT612894 HMGB1 high mobility group box 1 2 2
MIRT613291 BACE2 beta-site APP-cleaving enzyme 2 2 4
MIRT614162 MYO1F myosin IF 2 2
MIRT614217 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT615474 RPS6KA3 ribosomal protein S6 kinase A3 2 2
MIRT615863 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT616022 PRRG4 proline rich and Gla domain 4 2 2
MIRT616349 RASGEF1B RasGEF domain family member 1B 2 2
MIRT616679 FJX1 four jointed box 1 2 2
MIRT616811 PAPPA-AS1 PAPPA antisense RNA 1 2 2
MIRT616964 LMX1A LIM homeobox transcription factor 1 alpha 2 2
MIRT617067 SPIB Spi-B transcription factor 2 2
MIRT618597 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT618656 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT618914 KLHL4 kelch like family member 4 2 2
MIRT620197 VN1R1 vomeronasal 1 receptor 1 2 2
MIRT620644 CXCL5 C-X-C motif chemokine ligand 5 2 2
MIRT620762 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT621142 RNF122 ring finger protein 122 2 2
MIRT621248 QTRT1 queuine tRNA-ribosyltransferase catalytic subunit 1 2 2
MIRT622711 PLEKHA2 pleckstrin homology domain containing A2 2 2
MIRT622941 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT623329 MAK16 MAK16 homolog 2 2
MIRT623539 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT624413 CCDC149 coiled-coil domain containing 149 2 2
MIRT624478 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT624574 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT624584 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT624685 AR androgen receptor 2 2
MIRT625750 GPC5 glypican 5 2 2
MIRT626539 EMCN endomucin 2 2
MIRT627474 STRN striatin 2 2
MIRT628183 GLP1R glucagon like peptide 1 receptor 2 2
MIRT634165 XKR4 XK related 4 2 2
MIRT634553 LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 2 2
MIRT637463 DEFB105B defensin beta 105B 2 4
MIRT637495 DEFB105A defensin beta 105A 2 4
MIRT638102 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT638313 RNF157 ring finger protein 157 2 2
MIRT639297 OPTN optineurin 2 2
MIRT639588 RGS5 regulator of G protein signaling 5 2 2
MIRT639721 RAB17 RAB17, member RAS oncogene family 2 2
MIRT640060 KPNA6 karyopherin subunit alpha 6 2 2
MIRT640117 DCAF7 DDB1 and CUL4 associated factor 7 2 2
MIRT640387 ZNF785 zinc finger protein 785 2 2
MIRT640579 MYO5A myosin VA 2 2
MIRT640591 TM9SF4 transmembrane 9 superfamily member 4 2 2
MIRT640627 ZFP30 ZFP30 zinc finger protein 2 2
MIRT640761 GLO1 glyoxalase I 2 2
MIRT640808 ZMAT1 zinc finger matrin-type 1 2 2
MIRT641827 TRIM71 tripartite motif containing 71 2 2
MIRT643955 GALNT13 polypeptide N-acetylgalactosaminyltransferase 13 2 2
MIRT644218 ADD1 adducin 1 2 2
MIRT644356 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 2 2
MIRT644560 SPOP speckle type BTB/POZ protein 2 2
MIRT645486 TRIM63 tripartite motif containing 63 2 2
MIRT645595 MRPS15 mitochondrial ribosomal protein S15 2 2
MIRT645840 BRS3 bombesin receptor subtype 3 2 2
MIRT645944 TTF2 transcription termination factor 2 2 2
MIRT646154 VASH2 vasohibin 2 2 2
MIRT648097 LRRFIP1 LRR binding FLII interacting protein 1 2 2
MIRT648131 JAGN1 jagunal homolog 1 2 2
MIRT648469 TCERG1 transcription elongation regulator 1 2 2
MIRT648954 ZNF385D zinc finger protein 385D 2 4
MIRT649447 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 2 2
MIRT649559 POLD3 DNA polymerase delta 3, accessory subunit 2 2
MIRT649641 SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 2 2
MIRT650541 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT651104 ZNF48 zinc finger protein 48 2 2
MIRT651197 ZNF281 zinc finger protein 281 2 2
MIRT651682 VPS13D vacuolar protein sorting 13 homolog D 2 2
MIRT651995 UBA6 ubiquitin like modifier activating enzyme 6 2 2
MIRT652062 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT652310 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT654265 RGS17 regulator of G protein signaling 17 2 2
MIRT654402 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT654679 PSMB5 proteasome subunit beta 5 2 2
MIRT654741 PRKCB protein kinase C beta 2 2
MIRT656172 MRPL44 mitochondrial ribosomal protein L44 2 2
MIRT656583 LSAMP limbic system-associated membrane protein 2 2
MIRT656700 LNPEP leucyl and cystinyl aminopeptidase 2 2
MIRT657492 HBEGF heparin binding EGF like growth factor 2 2
MIRT658487 EXOC7 exocyst complex component 7 2 2
MIRT658583 EPHB1 EPH receptor B1 2 2
MIRT658657 EMX2 empty spiracles homeobox 2 2 2
MIRT659123 DENND5B DENN domain containing 5B 2 2
MIRT659188 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT659329 CSNK2A1 casein kinase 2 alpha 1 2 2
MIRT660376 B4GALT6 beta-1,4-galactosyltransferase 6 2 2
MIRT660636 ANKRD50 ankyrin repeat domain 50 2 2
MIRT660689 ANAPC1 anaphase promoting complex subunit 1 2 4
MIRT662434 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT662562 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT662966 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT666429 SH2B3 SH2B adaptor protein 3 2 2
MIRT668902 CREB1 cAMP responsive element binding protein 1 2 2
MIRT673056 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT687429 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT694785 DHFRL1 dihydrofolate reductase 2 2 2
MIRT708677 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT708853 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709605 CXorf23 BCLAF1 and THRAP3 family member 3 2 2
MIRT709993 IFIT1 interferon induced protein with tetratricopeptide repeats 1 2 2
MIRT710881 MTG1 mitochondrial ribosome associated GTPase 1 2 2
MIRT711023 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT711338 FMNL2 formin like 2 2 2
MIRT711351 HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 2 2
MIRT712163 SURF4 surfeit 4 2 2
MIRT712225 RIMS3 regulating synaptic membrane exocytosis 3 2 2
MIRT713028 MAP3K2 mitogen-activated protein kinase kinase kinase 2 2 2
MIRT713719 CD244 CD244 molecule 2 2
MIRT713970 ASIC4 acid sensing ion channel subunit family member 4 2 2
MIRT714872 SPDL1 spindle apparatus coiled-coil protein 1 2 2
MIRT715837 SZT2 SZT2, KICSTOR complex subunit 2 2
MIRT717031 KRTAP4-9 keratin associated protein 4-9 2 2
MIRT717158 SHB SH2 domain containing adaptor protein B 2 2
MIRT717292 KCTD20 potassium channel tetramerization domain containing 20 2 2
MIRT717670 CDC42BPA CDC42 binding protein kinase alpha 2 2
MIRT717838 NEGR1 neuronal growth regulator 1 2 2
MIRT718148 TTC33 tetratricopeptide repeat domain 33 2 2
MIRT719726 SLC39A11 solute carrier family 39 member 11 2 2
MIRT719909 IL5 interleukin 5 2 2
MIRT720245 FAM83F family with sequence similarity 83 member F 2 2
MIRT720352 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT720803 NUDT5 nudix hydrolase 5 2 2
MIRT720930 PPP1R3E protein phosphatase 1 regulatory subunit 3E 2 2
MIRT721609 PPP1CB protein phosphatase 1 catalytic subunit beta 2 2
MIRT722090 SUSD1 sushi domain containing 1 2 2
MIRT722271 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722548 FGFR1OP FGFR1 oncogene partner 2 2
MIRT723141 METTL24 methyltransferase like 24 2 2
MIRT723271 TAL2 TAL bHLH transcription factor 2 2 2
MIRT723396 OAF out at first homolog 2 2
MIRT723633 STK25 serine/threonine kinase 25 2 2
MIRT723680 CIRH1A UTP4, small subunit processome component 2 2
MIRT723803 BDKRB2 bradykinin receptor B2 2 2
MIRT723894 NUDT21 nudix hydrolase 21 2 2
MIRT724672 NCAPG non-SMC condensin I complex subunit G 2 2
MIRT724759 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
MIRT724973 TNS1 tensin 1 2 2
MIRT725046 ZFP36L1 ZFP36 ring finger protein like 1 2 2
MIRT725428 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6868-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-6868-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-6868-3p Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)

Error report submission