miRTarBase - #MIRT445598


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pre-miRNA Information
pre-miRNA hsa-mir-3915   
Genomic Coordinates chrX: 32583656 - 32583752
Description Homo sapiens miR-3915 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3915
Sequence 21| UUGAGGAAAAGAUGGUCUUAUU |42
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs997323565 10 dbSNP
rs1192161547 15 dbSNP
rs1255075246 19 dbSNP
rs1452812574 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CAMK2N1   
Synonyms PRO1489
Description calcium/calmodulin dependent protein kinase II inhibitor 1
Transcript NM_018584   
Expression
Putative miRNA Targets on CAMK2N1
3'UTR of CAMK2N1
(miRNA target sites are highlighted)		 
>CAMK2N1|NM_018584|3'UTR
   1 CTCCCCCAAAGACAATGAGTTAAGGGAGAGAATAAGAACGGCGGTAACAGTTATTGGCAAAAAGCATGAAAAGAGAAAGC
  81 ACTTTGAAATTTATTACTAGCTTGCTACCCACGATGAAATCAACAACCTGTATCTGGTATCAGGCCGGGAGACAGATGAG
 161 GCGAGAGGAGGAGGAGGAGGAGGAGAAGGCTCTGGGCTCCTCTGCAAAAATAAAAATAAAAAAATAAATAAAATTTTAAA
 241 AATAATAAAAATTCACTATATACACATATAAAGAAATAAAAAGAAGTCTCAGTTGCAGCTATTTGTCAAAATTAATATCC
 321 ATTTCTTTTTATATACGGTGAATATTGCGCAATTATAGATCTGGATTTTGAACCACTTAATGAAGCGGCAACACCAGGTG
 401 TTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCAATGTTTACATTATTTAATCTTGCAAAAATGGTTCTGTGC
 481 ACTTGGATGTGAAATGCTGTCCAGTTTTATTTTTTTTATGTTGTTATCCTTGGATGTACAAAAAATTCAGAAAATGATCT
 561 CTGTAGATATTCTGTTTTATTTTGGTCATCTTTAGAAGTTATCAGGAATGTGTTTAAAACAAGAAGAGAACTTTTCTAAG
 641 GAATGATACATAGAAAAGATTTTATTTTAAAATGAGTTGTAAAGCTTGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAA
 721 GTTAATGCAAATGGACACATTTTTTATGTCAGAAAAACACACACACACACACACACACACACACACACACACGAAAAACA
 801 AAGAAAAAAATGCTTGAGCTTTTTCTAACTTCCCCTTGCAGTCTGTTGTGTGAGCAGCCTGTTTATTTCTCTAATATTAT
 881 GTCAGTTTATTCTCTTTAATGGACTGTAAAAAAATGTAATCACAAGAGTGCCAAATATCTTGAAATGCCAAAAGGCATTT
 961 TAGTTTCTTTTCTCTGTGCTCTGAGTCCACGTACAGGAATGCTTGGAGTGTCTTTTCTGTTATTTATAGGGATTCTCTTA
1041 AGGCACACCAGCTGCCTGTTTTGCATGGTATTTGCAAAAATGCCTCTTGCGTGAGGAAATCTTTTACCATTTTTTGTTTG
1121 CAACTTTGGACCTCAAGAGGTTTCCCTTCCCTTCCCCGTTCCCTCTTTTCTTAATTCAATATTCTGTATGTTGCACCTTG
1201 AACCAGCACACAGGGCTATTTCTCCAATGTACAATAAAAGAATTGTTCCTGTGTCTCAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuauUCUGGUAGAAAAGGAGuu 5'
              || |::|:| ||:|||  
Target 5' gagcAGCCTGTTTATTTCTCta 3'
 852 - 873 126.00 -8.00
2 
miRNA  3' uuauucuGGUAGAAAAGGAGUu 5'
                 || || |||:||:| 
Target 5' ccccgttCCCTC-TTTTCTTAa 3'
 1154 - 1174 122.00 -9.90
3 
miRNA  3' uuaUUCUGGUAGA-------AAAGGAGuu 5'
             |||: |||:|       |||:|||  
Target 5' caaAAGG-CATTTTAGTTTCTTTTCTCtg 3'
 949 - 976 118.00 -8.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30514000 30 COSMIC
COSN7983907 30 COSMIC
COSN30457298 43 COSMIC
COSN26969087 46 COSMIC
COSN30109927 55 COSMIC
COSN31513831 61 COSMIC
COSN30177599 63 COSMIC
COSN31570357 68 COSMIC
COSN31568262 88 COSMIC
COSN5364238 95 COSMIC
COSN26576139 97 COSMIC
COSN26509318 138 COSMIC
COSN2529642 165 COSMIC
COSN30100425 169 COSMIC
COSN26573753 173 COSMIC
COSN31490109 217 COSMIC
COSN31489141 561 COSMIC
COSN7199805 570 COSMIC
COSN31607828 628 COSMIC
COSN32063017 663 COSMIC
COSN26229055 692 COSMIC
COSN27258542 756 COSMIC
COSN27464077 756 COSMIC
COSN20094470 757 COSMIC
COSN20090170 758 COSMIC
COSN22625283 816 COSMIC
COSN31544458 901 COSMIC
COSN31546767 951 COSMIC
COSN5798123 991 COSMIC
COSN31483107 1090 COSMIC
COSN31569878 1096 COSMIC
COSN9057686 1132 COSMIC
COSN31562204 1177 COSMIC
COSN31608715 1240 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs778043761 3 dbSNP
rs1211995972 8 dbSNP
rs1032453270 9 dbSNP
rs199959572 15 dbSNP
rs777324226 17 dbSNP
rs1244472016 22 dbSNP
rs996580208 26 dbSNP
rs1356505910 32 dbSNP
rs964153871 38 dbSNP
rs1280161794 39 dbSNP
rs1238439630 41 dbSNP
rs748605767 42 dbSNP
rs773597386 44 dbSNP
rs200497795 46 dbSNP
rs1325857489 50 dbSNP
rs1231476460 52 dbSNP
rs1343602363 57 dbSNP
rs1397886736 60 dbSNP
rs917952787 65 dbSNP
rs1403134430 76 dbSNP
rs1017733291 79 dbSNP
rs1464773806 84 dbSNP
rs1425486500 95 dbSNP
rs1171204737 99 dbSNP
rs550642805 99 dbSNP
rs1477414742 107 dbSNP
rs1260953431 111 dbSNP
rs1009079542 112 dbSNP
rs890663720 118 dbSNP
rs1274915257 121 dbSNP
rs1442526718 126 dbSNP
rs11539081 130 dbSNP
rs1254920100 142 dbSNP
rs1198358748 146 dbSNP
rs1438614555 147 dbSNP
rs1260324194 149 dbSNP
rs1219652103 155 dbSNP
rs772507380 163 dbSNP
rs1276901016 166 dbSNP
rs547186569 186 dbSNP
rs547323430 186 dbSNP
rs778508058 186 dbSNP
rs979647006 190 dbSNP
rs532495482 210 dbSNP
rs968212032 217 dbSNP
rs1464926505 218 dbSNP
rs1048008252 221 dbSNP
rs993775605 224 dbSNP
rs1473119090 225 dbSNP
rs899133828 229 dbSNP
rs1038123666 234 dbSNP
rs938068906 237 dbSNP
rs1439135230 238 dbSNP
rs953236070 238 dbSNP
rs1170646692 246 dbSNP
rs1432955382 249 dbSNP
rs1199623917 253 dbSNP
rs1030056998 256 dbSNP
rs1256618063 263 dbSNP
rs1212135265 264 dbSNP
rs533853334 267 dbSNP
rs926705857 272 dbSNP
rs1283601339 273 dbSNP
rs1046508882 277 dbSNP
rs1379330052 279 dbSNP
rs1479311601 280 dbSNP
rs745495565 281 dbSNP
rs1362539813 283 dbSNP
rs1446373891 287 dbSNP
rs140536427 301 dbSNP
rs919424526 309 dbSNP
rs1483562110 318 dbSNP
rs186800743 320 dbSNP
rs1405816422 330 dbSNP
rs1389943308 331 dbSNP
rs1160900895 334 dbSNP
rs1006091397 335 dbSNP
rs528485704 343 dbSNP
rs1208357550 346 dbSNP
rs561579876 348 dbSNP
rs1044863229 349 dbSNP
rs1224240363 352 dbSNP
rs1012357534 353 dbSNP
rs896582818 356 dbSNP
rs1208094059 359 dbSNP
rs1056523310 361 dbSNP
rs1220433321 364 dbSNP
rs1286893060 373 dbSNP
rs1348483991 386 dbSNP
rs543364993 388 dbSNP
rs988005182 391 dbSNP
rs1276337235 395 dbSNP
rs1436961216 411 dbSNP
rs923928141 422 dbSNP
rs1228785995 428 dbSNP
rs1421496992 441 dbSNP
rs1044043730 442 dbSNP
rs780718240 443 dbSNP
rs924950287 448 dbSNP
rs1426841116 450 dbSNP
rs1446175601 458 dbSNP
rs1358768770 459 dbSNP
rs911423550 464 dbSNP
rs768155176 494 dbSNP
rs1489589338 495 dbSNP
rs575872489 496 dbSNP
rs1263914504 502 dbSNP
rs563900858 503 dbSNP
rs545122459 509 dbSNP
rs1410437939 510 dbSNP
rs1019776871 517 dbSNP
rs1344011758 518 dbSNP
rs1473198885 518 dbSNP
rs1401757881 522 dbSNP
rs975816626 527 dbSNP
rs1414741079 550 dbSNP
rs1296975269 559 dbSNP
rs1397610587 561 dbSNP
rs962053467 564 dbSNP
rs1176293245 565 dbSNP
rs1186222606 569 dbSNP
rs1424884609 571 dbSNP
rs1174735544 573 dbSNP
rs1008022308 574 dbSNP
rs1479056070 576 dbSNP
rs954843599 578 dbSNP
rs1014535281 594 dbSNP
rs1192992030 599 dbSNP
rs182259303 601 dbSNP
rs577710318 625 dbSNP
rs1472291494 627 dbSNP
rs1237646817 628 dbSNP
rs1211075563 636 dbSNP
rs1211657889 644 dbSNP
rs1442131622 658 dbSNP
rs552803011 658 dbSNP
rs1318446154 669 dbSNP
rs567737444 669 dbSNP
rs951944476 675 dbSNP
rs534564936 681 dbSNP
rs1023485294 683 dbSNP
rs993725127 697 dbSNP
rs1012507893 703 dbSNP
rs1209340529 711 dbSNP
rs112049009 721 dbSNP
rs748734657 728 dbSNP
rs1037672380 733 dbSNP
rs1378742255 734 dbSNP
rs573579975 738 dbSNP
rs1467540909 745 dbSNP
rs1170568099 746 dbSNP
rs766892818 746 dbSNP
rs1284958431 752 dbSNP
rs1450299075 754 dbSNP
rs1451372961 756 dbSNP
rs7520427 756 dbSNP
rs71010558 757 dbSNP
rs1472556644 758 dbSNP
rs1491282227 758 dbSNP
rs753588194 758 dbSNP
rs1227266555 760 dbSNP
rs1386624054 760 dbSNP
rs1310961348 762 dbSNP
rs999615731 762 dbSNP
rs905230536 764 dbSNP
rs1391447683 766 dbSNP
rs1331178347 770 dbSNP
rs760010123 788 dbSNP
rs1460861166 789 dbSNP
rs1165507136 790 dbSNP
rs1352132426 790 dbSNP
rs1175272631 793 dbSNP
rs1180718361 793 dbSNP
rs1220796283 793 dbSNP
rs1237335802 793 dbSNP
rs1265994424 793 dbSNP
rs1287616422 793 dbSNP
rs1354519371 793 dbSNP
rs1423349616 793 dbSNP
rs143510553 793 dbSNP
rs1440610575 793 dbSNP
rs1489395042 793 dbSNP
rs201950578 793 dbSNP
rs75317375 793 dbSNP
rs1163148920 799 dbSNP
rs687922 800 dbSNP
rs1043734542 803 dbSNP
rs902552630 803 dbSNP
rs1405095735 805 dbSNP
rs1267858301 806 dbSNP
rs1190539690 807 dbSNP
rs1264631855 811 dbSNP
rs1489859190 811 dbSNP
rs1046899015 820 dbSNP
rs1216727648 825 dbSNP
rs11539080 828 dbSNP
rs1258614358 833 dbSNP
rs890053831 834 dbSNP
rs913708626 835 dbSNP
rs1052238729 840 dbSNP
rs936553674 844 dbSNP
rs925200584 854 dbSNP
rs1302480259 865 dbSNP
rs1404871687 886 dbSNP
rs975391727 896 dbSNP
rs1246949272 897 dbSNP
rs529575172 899 dbSNP
rs1466236993 901 dbSNP
rs1157024643 915 dbSNP
rs922790342 915 dbSNP
rs1271138994 917 dbSNP
rs745688155 921 dbSNP
rs1377987517 934 dbSNP
rs1175101143 939 dbSNP
rs111271138 950 dbSNP
rs1425723485 952 dbSNP
rs1193701671 954 dbSNP
rs1290872383 968 dbSNP
rs951126667 970 dbSNP
rs1230316388 973 dbSNP
rs1487656433 975 dbSNP
rs907569738 976 dbSNP
rs1201803104 983 dbSNP
rs1297029194 990 dbSNP
rs1256887034 1003 dbSNP
rs1435846499 1007 dbSNP
rs1223294793 1011 dbSNP
rs756952196 1012 dbSNP
rs1321984313 1014 dbSNP
rs751547431 1018 dbSNP
rs1368014759 1019 dbSNP
rs984440564 1023 dbSNP
rs951687455 1026 dbSNP
rs1023516297 1027 dbSNP
rs1397940836 1031 dbSNP
rs990712723 1032 dbSNP
rs777796479 1046 dbSNP
rs1468062390 1047 dbSNP
rs1034854677 1050 dbSNP
rs1171270601 1082 dbSNP
rs1475078134 1083 dbSNP
rs28410966 1085 dbSNP
rs972232221 1087 dbSNP
rs569489076 1090 dbSNP
rs1167343189 1091 dbSNP
rs1189025634 1097 dbSNP
rs1423973309 1102 dbSNP
rs1427464786 1107 dbSNP
rs538125963 1109 dbSNP
rs551205533 1115 dbSNP
rs1201430436 1120 dbSNP
rs1460241615 1121 dbSNP
rs1168696831 1124 dbSNP
rs758213283 1130 dbSNP
rs1265186294 1137 dbSNP
rs1339309853 1139 dbSNP
rs1268430667 1141 dbSNP
rs902584027 1144 dbSNP
rs1016925181 1155 dbSNP
rs755167658 1157 dbSNP
rs563628303 1158 dbSNP
rs1378822458 1161 dbSNP
rs889749954 1162 dbSNP
rs550396464 1185 dbSNP
rs1340337039 1187 dbSNP
rs1013600676 1190 dbSNP
rs1050468488 1198 dbSNP
rs892554099 1201 dbSNP
rs1052186565 1209 dbSNP
rs376661075 1218 dbSNP
rs1299268300 1220 dbSNP
rs1386772664 1222 dbSNP
rs1368876415 1227 dbSNP
rs1295704171 1228 dbSNP
rs1441232905 1251 dbSNP
rs1240339034 1257 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000375078.3 | 3UTR | UCAAGUUUCUUUCAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
111 hsa-miR-3915 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059544 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha 2 2
MIRT081703 ZNF507 zinc finger protein 507 2 2
MIRT083311 ZCCHC3 zinc finger CCHC-type containing 3 2 6
MIRT119046 SFT2D3 SFT2 domain containing 3 2 2
MIRT189381 TXLNA taxilin alpha 2 4
MIRT195895 C16ORF72 chromosome 16 open reading frame 72 2 6
MIRT223807 OXR1 oxidation resistance 1 2 2
MIRT292954 ZNF146 zinc finger protein 146 2 4
MIRT293949 RPL13A ribosomal protein L13a 2 6
MIRT300900 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT339332 SESN2 sestrin 2 2 2
MIRT349304 ZNF317 zinc finger protein 317 2 2
MIRT364736 TOR1B torsin family 1 member B 2 2
MIRT366233 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT384605 CLIC4 chloride intracellular channel 4 2 2
MIRT401745 HLA-DRA major histocompatibility complex, class II, DR alpha 2 2
MIRT443169 UBL3 ubiquitin like 3 2 2
MIRT444215 METTL12 methyltransferase like 12 2 2
MIRT444375 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT445340 TCEANC transcription elongation factor A N-terminal and central domain containing 2 2
MIRT445474 KDM6A lysine demethylase 6A 2 2
MIRT445598 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT445630 TMEM50A transmembrane protein 50A 2 2
MIRT446012 VNN1 vanin 1 2 2
MIRT446115 ASTN1 astrotactin 1 2 2
MIRT446248 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT446382 SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein 2 2
MIRT446940 ZMAT3 zinc finger matrin-type 3 2 2
MIRT446967 SLCO4C1 solute carrier organic anion transporter family member 4C1 2 2
MIRT447178 PGRMC2 progesterone receptor membrane component 2 2 2
MIRT447209 APBB2 amyloid beta precursor protein binding family B member 2 2 2
MIRT447237 IHH indian hedgehog 2 2
MIRT447807 EMX1 empty spiracles homeobox 1 2 2
MIRT447853 RRP8 ribosomal RNA processing 8 2 4
MIRT448054 MMP15 matrix metallopeptidase 15 2 2
MIRT448094 RASD2 RASD family member 2 2 2
MIRT448704 KLHL11 kelch like family member 11 2 2
MIRT448851 FEM1C fem-1 homolog C 2 2
MIRT449488 ZBTB4 zinc finger and BTB domain containing 4 2 2
MIRT449785 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT450774 PDE3A phosphodiesterase 3A 2 2
MIRT451124 ZNF99 zinc finger protein 99 2 2
MIRT452676 GPR156 G protein-coupled receptor 156 2 2
MIRT452888 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453188 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453353 ZNF3 zinc finger protein 3 2 2
MIRT454502 ZFYVE27 zinc finger FYVE-type containing 27 2 2
MIRT454629 FAM83H family with sequence similarity 83 member H 2 2
MIRT455183 AGTRAP angiotensin II receptor associated protein 2 2
MIRT458204 FOXL2 forkhead box L2 2 2
MIRT458723 CES2 carboxylesterase 2 2 2
MIRT458942 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT460304 FLCN folliculin 2 2
MIRT460989 SYT7 synaptotagmin 7 2 2
MIRT461697 ZNF426 zinc finger protein 426 2 2
MIRT461903 NECAB3 N-terminal EF-hand calcium binding protein 3 2 2
MIRT462193 NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 2 2
MIRT462290 PPM1H protein phosphatase, Mg2+/Mn2+ dependent 1H 2 2
MIRT463795 XPOT exportin for tRNA 2 2
MIRT464649 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 4
MIRT465911 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 4
MIRT465992 TMEM189 transmembrane protein 189 2 4
MIRT466302 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT466575 TBC1D2B TBC1 domain family member 2B 2 2
MIRT470558 POU2F1 POU class 2 homeobox 1 2 2
MIRT471333 PERP PERP, TP53 apoptosis effector 2 2
MIRT471659 PALM2 paralemmin 2 2 2
MIRT472363 TSPAN1 tetraspanin 1 2 2
MIRT473468 MCFD2 multiple coagulation factor deficiency 2 2 2
MIRT474702 KIF3A kinesin family member 3A 2 2
MIRT476067 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT476077 GRB2 growth factor receptor bound protein 2 2 2
MIRT476423 GBA2 glucosylceramidase beta 2 2 2
MIRT476463 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT477877 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT478240 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT479460 CDK6 cyclin dependent kinase 6 2 2
MIRT481030 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT491496 HLA-DOA major histocompatibility complex, class II, DO alpha 2 2
MIRT497585 SLC23A1 solute carrier family 23 member 1 2 2
MIRT498542 TMEM30B transmembrane protein 30B 2 2
MIRT499263 NBPF11 NBPF member 11 2 2
MIRT504698 ZNF117 zinc finger protein 117 2 2
MIRT511288 KLHL15 kelch like family member 15 2 4
MIRT523121 HSP90B1 heat shock protein 90 beta family member 1 2 4
MIRT529601 H1F0 H1 histone family member 0 2 2
MIRT533481 TRIM71 tripartite motif containing 71 2 2
MIRT535571 NUP37 nucleoporin 37 2 4
MIRT537869 EDA2R ectodysplasin A2 receptor 2 2
MIRT538010 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552681 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 4
MIRT554986 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT556659 KMT2D lysine methyltransferase 2D 2 4
MIRT557437 GTPBP2 GTP binding protein 2 2 2
MIRT560813 CRTAP cartilage associated protein 2 2
MIRT562115 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT563103 IFRD2 interferon related developmental regulator 2 2 2
MIRT574199 LMNB1 lamin B1 2 2
MIRT623920 FMNL3 formin like 3 2 2
MIRT626551 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 2 2
MIRT645458 ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 2 2
MIRT649082 CACNA1B calcium voltage-gated channel subunit alpha1 B 2 2
MIRT659477 CLDN1 claudin 1 2 2
MIRT667950 HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 2 2
MIRT701981 MIER3 MIER family member 3 2 2
MIRT708694 TFDP2 transcription factor Dp-2 2 2
MIRT709649 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710090 FAM229B family with sequence similarity 229 member B 2 2
MIRT718396 ALDH1A3 aldehyde dehydrogenase 1 family member A3 2 2
MIRT724972 TNS1 tensin 1 2 2
MIRT756050 HRH4 histamine receptor H4 2 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3915 Paclitaxel 36314 NSC125973 approved resistant High Prostate Cancer cell line (DU-145, PC-3)
hsa-miR-3915 Cisplatin + Decitabine sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-3915 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3915 Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-3915 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3915 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3915 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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