miRTarBase - #MIRT446068


—
pre-miRNA Information
pre-miRNA hsa-mir-548ah   
Genomic Coordinates chr4: 76575551 - 76575626
Description Homo sapiens miR-548ah stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548ah-3p
Sequence 47| CAAAAACUGCAGUUACUUUUGC |68
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 4 + 76575599 29233923 MiREDiBase
A-to-I 4 4 + 76575600 29233923 MiREDiBase
A-to-I 5 4 + 76575601 29233923 MiREDiBase
A-to-I 6 4 + 76575602 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1486932451 12 dbSNP
rs1036377818 16 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RABIF   
Synonyms MSS4, RASGFR3, RASGRF3
Description RAB interacting factor
Transcript NM_002871   
Expression
Putative miRNA Targets on RABIF
3'UTR of RABIF
(miRNA target sites are highlighted)		 
>RABIF|NM_002871|3'UTR
   1 CTGAGGGGAGGGGTACTCAGCTCCATCTCCAAAGATAAACCTACTCCCCACAAGAACTGGCCTTTAATGTGGTATAACTG
  81 TTCCGCTGCCTTCTTGTCTGTGCTAATATAAATACTGAGTACCAGCATGTCCATTTGAACATGCAGAGGGTTAATCCTGC
 161 TTCCTAAAGCCTCAAGTACATGCCTCCTGCTTAGTTCACTTTGTATCACATTTCCTAAGCTCCCTTTTCCCCCAGTTTTG
 241 GGACACTGTGCTTACCTCCAAAAATCTCATCTCTTCCCTGGCATTCTCCCTAGGCTCTGTTTTGCCCAGGGGCTCCCGCT
 321 TTTTCTTGCTCTAGAAGAGCAGTATTCAACCTTTTAGCTATGATGACACATAACAAAAGATGCTTATGTACTAATAGTTG
 401 AAATCTGCCTTTTTCTCATTCAAGAAGGCATACAAATATCTGAGAGTGACTTTGTTGTATGGCTACCCTTGTGATCTACA
 481 GTAATTTATTCTTTCTAAAAGTAAAGCATTTTCAAAACTCAGTATTTAAACCACTAACCAGAAACATTACTTTGGATGCA
 561 TCTCTAATACCATGTTTGAGCACCTCTGCTCTAGGTTGAGAATGACATTTTATTGTGAAGATGGGTGTGGTCCCTCTTCC
 641 CTTGAAATCTTGTAGTTTCTTTTTATATTAGCTCCTCACTGCTACAGCCTAGAAGGTGAGAAGCAGATTTTAACCCCATC
 721 TGGCAGCCATTCAAGGAAAACCCAGCCCTGGCTGTTTACTCAGGCTCTCTTAGAATGAGAGTGGAGGGTGTAGGATATGA
 801 GGGTTAGGCCTTTGCCACATTATACAAAAGTTTATAATTTGCCACATCTGGACAAGTAACTTTCTTCTTTTGTTCATAGG
 881 CAAGACTTCTTTAATGGATAGTATCATTTACTGAACCTACTGGGCATGGTCCTCATGGAGTTTTGGTTCAACTGGAATCT
 961 CTGTGCCAACCCAGGATACAAACTTCCATCCAGATGCATGGATACAAATTTCCATAGCTCCGGGGCTGCTCTAACAGTTT
1041 GATATCAGCAGACGTGTTTAAGCCTTCAACTTGATTTCCAATTATTCCATCATTTCTATTCTGAAATGACTCACTGTCGT
1121 AGAAGGAAGTTTATTATATAACCAAGGTTTCAGGTATCCTCCTGTCACCACCTCTACTATTCAGGAGGCCTAAAATTGAA
1201 ATAAGTACTAAACAGAAACCTTACCATCTGAAGTCCCTTCCATTGTTTTCTAGTTGCTTCCTCATTCCTTTACCCCCAAA
1281 CTTTCTAAGGGCTCCCCGACTGCAGTGCAAGGTGGCCTTGGGCACAGTTTTGCAACCAACCTACTCCCCTGGAAAGATGG
1361 CTTCCTTCTCCAATTAGCCTGAATGAGCTTTAGTAAGCAATTGAGAGAACTGTGTTTTTCCGACAAACGGTCACATGTCC
1441 ATCGTTATGGCATGTGCAGAAAAACAGAGTTATCCACACAAGTCAGGAGCAAAACCCAAGTAGATGCCTCTAGGGGCACA
1521 TGGCCCCTCACATCACAAGCCAGAACCTAAGCTAAGCATTTTTTAAATTGAGTTTGAGACTAGCCTGGGCAACATAGTGA
1601 GACCCCATCTCTATTTAAAAAATGAACAAAATTACCTGGGCATAGTGGTGTATACCTGTAGTCCCTGCTACTTGGGAGGC
1681 TCAGGTGGGAGGATCACTTGAGCCCCAAAGATGGTGGCTGCAGTAAGCCAAGATCACACCACTGGCACTCCAGCCTGGGC
1761 AACAGAGTGAGACCCTGTCTCAAACAAACAACAACAGTAACAACAAAAAAATATATAGCGACTTGAATAGGAAACCATAG
1841 TATTTCATTGTTTTAATTTGCATTTATTTTATTTCTAGTGAAACTTTTATATACGTATCGGTCATTTCTATTTCCTTTTT
1921 TGAGAACTGCCAAATGTTGCCCTAGTAGCCAAAAATATCAGGTTGCTATTCTGCCTTTTCAGTTTGATCTGAAAGAAATA
2001 AAGGCATTTAAGCAATGGAAATTAGATTTCTGCATGTCCTTGGGAAGAATATATAAATTGAAAAAACAAAGGAGAGCTGA
2081 AACCTGAACCTTGGGGTTTAGCTTAAGGTCAACCAACTGATTATCTAGTCAGCTATAAAATGCAAACGTCATTTCTTCAT
2161 TTCCCTCACACCTAATAGGCTCTCAGTACATACTTGTGAATCAGCTGCTATTTGCTGTGGGTAGATAGAGGCAACCTGTG
2241 CTTTCTGCTCCGAGTATAGAAACTTCCGTTTTCTATTGGGGAGAGCAGTTGATTTTGTGAAAGCCTGATTGTTTCCACAT
2321 AATTGTCTGTTGTTTTACAAAAACATGGAATCAAAGATGGGCAGTGGTGTACTGACATTTCACAAATTGTCACCATGTTG
2401 TATATGAGGCTACACATGTAACTGAGTAACTATGAGGACTTCTGCTTCTGATAATGGTGGATAGGTCCTTTGGACTACCC
2481 AGCTCACTGGTTAACTAGAAAGGCTGGACAAAATACTTTAGAAATCTGTGTGAACACACCAAGAGAGCCGACTTGACTTT
2561 GAAGAATTGCTAAACCAGGACAGCAGAGGAGATGGGAACCCTGGGAGGTGGGCTTGGTGTGAGGGCCACCGTTCTCCTGG
2641 GAGCATTTGCCAAACTTGGAGGTGATTCAGAGGCTTAGCAGTGATTTTAGCAGCCT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cguUUUCAUUG--AC----GUCAAAAac 5'
             ||:||::|  ||    |||||||  
Target 5' tgcAAGGTGGCCTTGGGCACAGTTTTgc 3'
 1306 - 1333 139.00 -11.00
2 
miRNA  3' cgUUUUCAUUGACGUCAAAAAc 5'
            :|:|| |||||  |||||| 
Target 5' ttGAGAG-AACTG-TGTTTTTc 3'
 1401 - 1420 134.00 -10.70
3 
miRNA  3' cgUUUUCA-UUGACGUCAAAAAc 5'
            :||:|| |:  |||| |||| 
Target 5' taGAAGGTGAGAAGCAGATTTTa 3'
 690 - 712 132.00 -8.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30150967 3 COSMIC
COSN30450070 6 COSMIC
COSN30102124 13 COSMIC
COSN30512204 36 COSMIC
COSN30139855 41 COSMIC
COSN31480146 46 COSMIC
COSN31546072 61 COSMIC
COSN31578562 84 COSMIC
COSN31500615 102 COSMIC
COSN31521813 251 COSMIC
COSN15697969 336 COSMIC
COSN15691772 337 COSMIC
COSN28670774 383 COSMIC
COSN31485481 432 COSMIC
COSN30173564 476 COSMIC
COSN31515998 686 COSMIC
COSN8428957 886 COSMIC
COSN20278215 905 COSMIC
COSN16449447 1578 COSMIC
COSN9056972 1627 COSMIC
COSN21775144 1875 COSMIC
COSN25862251 1952 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1054058101 1 dbSNP
rs201348739 10 dbSNP
rs1286818835 11 dbSNP
rs879098224 13 dbSNP
rs746182410 18 dbSNP
rs1287885172 23 dbSNP
rs771645228 27 dbSNP
rs745515653 28 dbSNP
rs781541009 41 dbSNP
rs1480108708 43 dbSNP
rs141723574 44 dbSNP
rs1000615324 48 dbSNP
rs368057777 51 dbSNP
rs1231537653 53 dbSNP
rs1234279986 55 dbSNP
rs1471441400 60 dbSNP
rs1042017861 62 dbSNP
rs148239627 66 dbSNP
rs566606348 69 dbSNP
rs1380350738 74 dbSNP
rs1423492874 75 dbSNP
rs966111113 83 dbSNP
rs1018865591 84 dbSNP
rs755078837 85 dbSNP
rs1008015236 96 dbSNP
rs3820379 105 dbSNP
rs920079883 115 dbSNP
rs1309939862 116 dbSNP
rs754292384 122 dbSNP
rs961481653 146 dbSNP
rs1294059177 151 dbSNP
rs866855610 153 dbSNP
rs546873068 164 dbSNP
rs908621324 165 dbSNP
rs1195515609 173 dbSNP
rs981430527 178 dbSNP
rs1023001294 179 dbSNP
rs971399572 180 dbSNP
rs1243024562 183 dbSNP
rs533012231 186 dbSNP
rs1022997691 192 dbSNP
rs563914149 205 dbSNP
rs182884644 213 dbSNP
rs531656767 228 dbSNP
rs1394031758 230 dbSNP
rs1032176051 235 dbSNP
rs1311503088 236 dbSNP
rs766806189 240 dbSNP
rs1405190739 242 dbSNP
rs552000226 251 dbSNP
rs1314941867 256 dbSNP
rs34563074 260 dbSNP
rs906954008 268 dbSNP
rs1341208157 269 dbSNP
rs1226943160 277 dbSNP
rs1268676845 283 dbSNP
rs1220726378 286 dbSNP
rs1311756700 289 dbSNP
rs35720508 291 dbSNP
rs1438896066 298 dbSNP
rs1393918833 307 dbSNP
rs1199605973 317 dbSNP
rs562550394 318 dbSNP
rs1460319667 321 dbSNP
rs1206196797 325 dbSNP
rs1131905 336 dbSNP
rs1423936225 342 dbSNP
rs1191887425 345 dbSNP
rs770253084 349 dbSNP
rs750744465 357 dbSNP
rs1007826638 358 dbSNP
rs1343328718 360 dbSNP
rs1428424331 361 dbSNP
rs1287249842 373 dbSNP
rs1131906 383 dbSNP
rs1381675804 384 dbSNP
rs560662450 389 dbSNP
rs1342541712 392 dbSNP
rs1219486376 412 dbSNP
rs1283037218 413 dbSNP
rs1321925624 448 dbSNP
rs1257061100 454 dbSNP
rs1401092478 454 dbSNP
rs1409808586 456 dbSNP
rs1203978882 459 dbSNP
rs1191434692 464 dbSNP
rs1453409902 465 dbSNP
rs1194012744 476 dbSNP
rs1428313873 479 dbSNP
rs1253143135 483 dbSNP
rs1351750307 497 dbSNP
rs10753924 500 dbSNP
rs1049472650 506 dbSNP
rs774190446 508 dbSNP
rs1140707 511 dbSNP
rs930577850 512 dbSNP
rs749771549 518 dbSNP
rs898781215 534 dbSNP
rs1400823499 540 dbSNP
rs533357767 549 dbSNP
rs578131128 564 dbSNP
rs1302827891 566 dbSNP
rs1215629258 571 dbSNP
rs1343992104 572 dbSNP
rs1388840149 576 dbSNP
rs1302430172 584 dbSNP
rs558356013 589 dbSNP
rs1317902410 595 dbSNP
rs971877674 604 dbSNP
rs1283250941 611 dbSNP
rs940188798 620 dbSNP
rs908594324 621 dbSNP
rs966059097 621 dbSNP
rs1489731522 624 dbSNP
rs1465140015 625 dbSNP
rs1192648081 627 dbSNP
rs912000725 639 dbSNP
rs1304303466 640 dbSNP
rs986137606 650 dbSNP
rs953528835 652 dbSNP
rs1388619161 665 dbSNP
rs568527963 669 dbSNP
rs1179648204 672 dbSNP
rs1359889259 675 dbSNP
rs981949781 694 dbSNP
rs537955779 698 dbSNP
rs1163033808 705 dbSNP
rs1363884428 725 dbSNP
rs1459645678 735 dbSNP
rs1294486748 759 dbSNP
rs1431389200 764 dbSNP
rs1362287696 765 dbSNP
rs768245622 767 dbSNP
rs575371779 771 dbSNP
rs1312151417 788 dbSNP
rs998544465 789 dbSNP
rs1378335914 793 dbSNP
rs1240176528 799 dbSNP
rs1290413251 803 dbSNP
rs1319476827 804 dbSNP
rs1011135245 808 dbSNP
rs1433760106 809 dbSNP
rs562771691 813 dbSNP
rs915907418 819 dbSNP
rs372672045 824 dbSNP
rs1395340228 827 dbSNP
rs1177724713 833 dbSNP
rs1426230113 834 dbSNP
rs762578137 842 dbSNP
rs1182993212 858 dbSNP
rs143189405 863 dbSNP
rs1425770868 870 dbSNP
rs149523605 872 dbSNP
rs1165816374 875 dbSNP
rs1354282041 876 dbSNP
rs544676772 890 dbSNP
rs1003753024 891 dbSNP
rs1401582880 892 dbSNP
rs1452551261 898 dbSNP
rs906943876 907 dbSNP
rs1376411334 912 dbSNP
rs1229652325 919 dbSNP
rs1045917804 922 dbSNP
rs1486470121 927 dbSNP
rs1313039457 929 dbSNP
rs780597595 935 dbSNP
rs1265852444 937 dbSNP
rs566455416 940 dbSNP
rs1347557490 946 dbSNP
rs1259758963 950 dbSNP
rs1032682436 951 dbSNP
rs979260182 959 dbSNP
rs966964948 962 dbSNP
rs894108323 967 dbSNP
rs115774713 969 dbSNP
rs1419018311 970 dbSNP
rs930525485 977 dbSNP
rs1007918448 979 dbSNP
rs919176629 981 dbSNP
rs890909062 982 dbSNP
rs1027942374 992 dbSNP
rs775441447 998 dbSNP
rs546603807 1010 dbSNP
rs1335375165 1016 dbSNP
rs1356898966 1017 dbSNP
rs944573901 1022 dbSNP
rs769622964 1024 dbSNP
rs1360757699 1025 dbSNP
rs1039038604 1029 dbSNP
rs539688063 1033 dbSNP
rs1318398898 1034 dbSNP
rs1222794142 1036 dbSNP
rs193004296 1037 dbSNP
rs745886842 1042 dbSNP
rs1413963410 1045 dbSNP
rs1241596400 1049 dbSNP
rs989484084 1053 dbSNP
rs1375772398 1054 dbSNP
rs1196188298 1067 dbSNP
rs550317556 1071 dbSNP
rs137954080 1081 dbSNP
rs1372053762 1087 dbSNP
rs1031292938 1098 dbSNP
rs115174803 1107 dbSNP
rs971327096 1111 dbSNP
rs879482905 1118 dbSNP
rs1397725649 1119 dbSNP
rs1299701419 1125 dbSNP
rs769289954 1129 dbSNP
rs112897849 1136 dbSNP
rs1272876414 1138 dbSNP
rs894232184 1153 dbSNP
rs1027692361 1154 dbSNP
rs994499115 1159 dbSNP
rs979741189 1164 dbSNP
rs966679807 1171 dbSNP
rs897737267 1176 dbSNP
rs780837655 1188 dbSNP
rs1202463014 1189 dbSNP
rs1479768137 1196 dbSNP
rs1036263202 1199 dbSNP
rs1219033125 1202 dbSNP
rs1286958493 1224 dbSNP
rs1250870575 1225 dbSNP
rs944646122 1226 dbSNP
rs1490254187 1233 dbSNP
rs890257846 1240 dbSNP
rs1197129130 1250 dbSNP
rs1228285359 1250 dbSNP
rs1320035901 1252 dbSNP
rs1177187093 1258 dbSNP
rs529304869 1264 dbSNP
rs1379120609 1276 dbSNP
rs141264849 1279 dbSNP
rs1159958856 1287 dbSNP
rs1360708499 1294 dbSNP
rs1232534694 1297 dbSNP
rs932021036 1298 dbSNP
rs540593879 1303 dbSNP
rs1389363971 1305 dbSNP
rs989473942 1307 dbSNP
rs935347533 1309 dbSNP
rs1332667150 1310 dbSNP
rs924170049 1325 dbSNP
rs751578760 1327 dbSNP
rs1374611124 1335 dbSNP
rs1242345193 1345 dbSNP
rs138710395 1352 dbSNP
rs367741960 1358 dbSNP
rs1466750291 1363 dbSNP
rs1004866245 1372 dbSNP
rs145841462 1373 dbSNP
rs1024187313 1379 dbSNP
rs1045895974 1383 dbSNP
rs1014442174 1387 dbSNP
rs991003846 1392 dbSNP
rs894535630 1403 dbSNP
rs1179902587 1406 dbSNP
rs765583112 1416 dbSNP
rs958695146 1421 dbSNP
rs1190014699 1422 dbSNP
rs17498748 1423 dbSNP
rs994446629 1428 dbSNP
rs575909658 1429 dbSNP
rs561866823 1430 dbSNP
rs1448910331 1436 dbSNP
rs1310064904 1437 dbSNP
rs945282274 1439 dbSNP
rs1242844178 1441 dbSNP
rs367952622 1443 dbSNP
rs142552127 1444 dbSNP
rs986562526 1448 dbSNP
rs189037308 1450 dbSNP
rs1459481718 1467 dbSNP
rs756887718 1467 dbSNP
rs955218096 1467 dbSNP
rs552897728 1468 dbSNP
rs776864291 1470 dbSNP
rs920987091 1473 dbSNP
rs1050683459 1476 dbSNP
rs1213054342 1477 dbSNP
rs1441374380 1480 dbSNP
rs1184817963 1481 dbSNP
rs1369788571 1482 dbSNP
rs1472929504 1483 dbSNP
rs751206742 1484 dbSNP
rs1335364853 1485 dbSNP
rs754992749 1498 dbSNP
rs1169613506 1504 dbSNP
rs893869791 1511 dbSNP
rs1467101557 1513 dbSNP
rs4950885 1519 dbSNP
rs1394317177 1521 dbSNP
rs1017010138 1522 dbSNP
rs935419562 1523 dbSNP
rs1003887625 1530 dbSNP
rs780243264 1538 dbSNP
rs879355673 1540 dbSNP
rs1276679981 1541 dbSNP
rs923908173 1543 dbSNP
rs982115625 1544 dbSNP
rs548353947 1551 dbSNP
rs1368227231 1558 dbSNP
rs1198169809 1564 dbSNP
rs1257663905 1579 dbSNP
rs1442637481 1590 dbSNP
rs1192548461 1607 dbSNP
rs1260727458 1615 dbSNP
rs894630539 1615 dbSNP
rs1171155493 1617 dbSNP
rs1324613339 1623 dbSNP
rs1464490647 1627 dbSNP
rs1131907 1629 dbSNP
rs536886966 1636 dbSNP
rs529979598 1642 dbSNP
rs749942413 1647 dbSNP
rs1296622480 1648 dbSNP
rs151079332 1650 dbSNP
rs1400940204 1656 dbSNP
rs973099641 1658 dbSNP
rs770396464 1678 dbSNP
rs961779122 1682 dbSNP
rs1441762681 1687 dbSNP
rs549239053 1696 dbSNP
rs1215298116 1698 dbSNP
rs377706144 1701 dbSNP
rs1489076149 1717 dbSNP
rs1193047556 1720 dbSNP
rs142977093 1732 dbSNP
rs1008603564 1742 dbSNP
rs370908061 1746 dbSNP
rs1378238388 1749 dbSNP
rs1419124803 1749 dbSNP
rs1156951284 1752 dbSNP
rs149006370 1755 dbSNP
rs1362627772 1760 dbSNP
rs1420543018 1762 dbSNP
rs1050983106 1767 dbSNP
rs758322646 1774 dbSNP
rs558017591 1776 dbSNP
rs1302538895 1777 dbSNP
rs1376842893 1786 dbSNP
rs769445497 1792 dbSNP
rs1345255530 1796 dbSNP
rs921081993 1797 dbSNP
rs1355406201 1807 dbSNP
rs746891633 1807 dbSNP
rs1441033390 1810 dbSNP
rs975313392 1813 dbSNP
rs559659689 1814 dbSNP
rs8884 1815 dbSNP
rs1211445647 1817 dbSNP
rs145730318 1819 dbSNP
rs1381017057 1820 dbSNP
rs1384769650 1821 dbSNP
rs1159606311 1836 dbSNP
rs1439019420 1843 dbSNP
rs1176783110 1850 dbSNP
rs1421791299 1856 dbSNP
rs1053631078 1864 dbSNP
rs1164398181 1872 dbSNP
rs75692754 1877 dbSNP
rs1459726610 1884 dbSNP
rs1173192587 1885 dbSNP
rs763855697 1887 dbSNP
rs1445306710 1889 dbSNP
rs1478403367 1891 dbSNP
rs1046825058 1895 dbSNP
rs1378541115 1898 dbSNP
rs1191010789 1900 dbSNP
rs949445371 1903 dbSNP
rs531165718 1910 dbSNP
rs1446338226 1916 dbSNP
rs562279126 1927 dbSNP
rs1218561334 1931 dbSNP
rs541573072 1933 dbSNP
rs1484540304 1943 dbSNP
rs916801829 1946 dbSNP
rs762486619 1950 dbSNP
rs1219383062 1952 dbSNP
rs377623944 1958 dbSNP
rs1267882675 1966 dbSNP
rs1024001837 1979 dbSNP
rs34918348 1980 dbSNP
rs572853389 1986 dbSNP
rs920061935 1988 dbSNP
rs972879256 1999 dbSNP
rs1162969167 2005 dbSNP
rs958978643 2016 dbSNP
rs1165919866 2022 dbSNP
rs1423421381 2032 dbSNP
rs75819201 2039 dbSNP
rs1173498926 2040 dbSNP
rs907664296 2049 dbSNP
rs1442241560 2053 dbSNP
rs1376438804 2058 dbSNP
rs545828907 2059 dbSNP
rs143572916 2064 dbSNP
rs1020380933 2071 dbSNP
rs1317123788 2077 dbSNP
rs1216605837 2083 dbSNP
rs556870581 2084 dbSNP
rs565637040 2088 dbSNP
rs1482350383 2089 dbSNP
rs996078277 2090 dbSNP
rs1235869327 2091 dbSNP
rs1484350563 2093 dbSNP
rs759359388 2095 dbSNP
rs184049151 2096 dbSNP
rs554715867 2104 dbSNP
rs1262875511 2112 dbSNP
rs1475102684 2116 dbSNP
rs768417552 2119 dbSNP
rs1173307913 2122 dbSNP
rs1195686098 2125 dbSNP
rs776064314 2128 dbSNP
rs1414407626 2132 dbSNP
rs1174742777 2135 dbSNP
rs1356989957 2136 dbSNP
rs1484572167 2147 dbSNP
rs890435243 2148 dbSNP
rs770664065 2153 dbSNP
rs1339470262 2155 dbSNP
rs1397844688 2164 dbSNP
rs999397016 2165 dbSNP
rs1270319170 2172 dbSNP
rs1362565428 2174 dbSNP
rs1218632255 2176 dbSNP
rs10920514 2177 dbSNP
rs1046501868 2180 dbSNP
rs1279403093 2185 dbSNP
rs1285523431 2190 dbSNP
rs1487440442 2191 dbSNP
rs1220928411 2205 dbSNP
rs1243126066 2223 dbSNP
rs190426452 2224 dbSNP
rs185960807 2225 dbSNP
rs1422408697 2228 dbSNP
rs909599432 2230 dbSNP
rs982534653 2240 dbSNP
rs1361147966 2250 dbSNP
rs1417549634 2251 dbSNP
rs1055545018 2252 dbSNP
rs931527468 2264 dbSNP
rs1345616590 2266 dbSNP
rs1435630257 2267 dbSNP
rs1327047580 2268 dbSNP
rs758507039 2268 dbSNP
rs920217519 2268 dbSNP
rs1235043452 2269 dbSNP
rs868472730 2276 dbSNP
rs1401041934 2277 dbSNP
rs916912515 2278 dbSNP
rs140093502 2279 dbSNP
rs1451436388 2282 dbSNP
rs34363024 2282 dbSNP
rs1219866129 2285 dbSNP
rs774486043 2286 dbSNP
rs940221914 2287 dbSNP
rs1248904185 2289 dbSNP
rs1455088478 2304 dbSNP
rs1474175998 2306 dbSNP
rs958904189 2308 dbSNP
rs1437408946 2311 dbSNP
rs1159978145 2315 dbSNP
rs1416953861 2331 dbSNP
rs1404493551 2345 dbSNP
rs1321362980 2350 dbSNP
rs907612085 2371 dbSNP
rs182422756 2376 dbSNP
rs1330749454 2377 dbSNP
rs1374831319 2385 dbSNP
rs6703138 2387 dbSNP
rs1307331545 2389 dbSNP
rs1280320023 2391 dbSNP
rs921580028 2395 dbSNP
rs974814513 2411 dbSNP
rs968929719 2416 dbSNP
rs749579872 2417 dbSNP
rs79189212 2418 dbSNP
rs756261138 2423 dbSNP
rs555922762 2426 dbSNP
rs1259421321 2428 dbSNP
rs1201128784 2430 dbSNP
rs977904314 2431 dbSNP
rs146098802 2439 dbSNP
rs1161241989 2451 dbSNP
rs899733419 2451 dbSNP
rs1025244061 2453 dbSNP
rs1229273207 2464 dbSNP
rs1381728865 2474 dbSNP
rs1278012020 2476 dbSNP
rs796806537 2489 dbSNP
rs941298813 2500 dbSNP
rs1393162747 2506 dbSNP
rs1013638031 2519 dbSNP
rs1340092098 2520 dbSNP
rs757641861 2526 dbSNP
rs895225085 2544 dbSNP
rs929710282 2549 dbSNP
rs1033683717 2550 dbSNP
rs1218439180 2557 dbSNP
rs1256658807 2562 dbSNP
rs762064443 2563 dbSNP
rs995501899 2567 dbSNP
rs898738033 2572 dbSNP
rs1037269803 2575 dbSNP
rs1349253900 2583 dbSNP
rs1056783628 2590 dbSNP
rs1185029242 2612 dbSNP
rs940294877 2626 dbSNP
rs1406891420 2627 dbSNP
rs891265911 2630 dbSNP
rs927512446 2631 dbSNP
rs1192695880 2636 dbSNP
rs1421320867 2639 dbSNP
rs1176332056 2647 dbSNP
rs1439900601 2652 dbSNP
rs542359721 2658 dbSNP
rs1239509282 2660 dbSNP
rs979018191 2667 dbSNP
rs1191241046 2682 dbSNP
rs1051708016 2688 dbSNP
rs1314953689 2697 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000367262.3 | 3UTR | UCAAGCUAAAAAUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
269 hsa-miR-548ah-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055349 PDCD4 programmed cell death 4 2 2
MIRT078710 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT088880 FOXN2 forkhead box N2 2 10
MIRT099612 ID4 inhibitor of DNA binding 4, HLH protein 2 4
MIRT111805 MPZL1 myelin protein zero like 1 2 2
MIRT166778 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 2
MIRT221310 LMBR1 limb development membrane protein 1 2 2
MIRT269387 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT309062 C4ORF3 chromosome 4 open reading frame 3 2 2
MIRT318550 SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein 2 2
MIRT325436 CKS2 CDC28 protein kinase regulatory subunit 2 2 2
MIRT331326 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT336802 ARF1 ADP ribosylation factor 1 2 4
MIRT350505 MRGBP MRG domain binding protein 2 6
MIRT374401 M6PR mannose-6-phosphate receptor, cation dependent 2 4
MIRT399357 IER2 immediate early response 2 2 2
MIRT401033 MOB1B MOB kinase activator 1B 2 4
MIRT441729 HAUS6 HAUS augmin like complex subunit 6 2 2
MIRT442381 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442407 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT443989 GJD3 gap junction protein delta 3 2 4
MIRT444047 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT444245 CHMP1B charged multivesicular body protein 1B 2 2
MIRT444402 FRMD5 FERM domain containing 5 2 2
MIRT444463 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT444644 HSBP1 heat shock factor binding protein 1 2 2
MIRT444854 EXD2 exonuclease 3'-5' domain containing 2 2 2
MIRT444988 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT445107 ZNF207 zinc finger protein 207 2 2
MIRT445449 HSPA14 heat shock protein family A (Hsp70) member 14 2 4
MIRT445515 CRNKL1 crooked neck pre-mRNA splicing factor 1 2 4
MIRT445590 RCC2 regulator of chromosome condensation 2 2 2
MIRT445679 TNFSF15 TNF superfamily member 15 2 2
MIRT445733 PGK1 phosphoglycerate kinase 1 2 2
MIRT445827 DNAAF3 dynein axonemal assembly factor 3 2 2
MIRT445996 CD1D CD1d molecule 2 2
MIRT446068 RABIF RAB interacting factor 2 2
MIRT446146 ST6GAL2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 2 2
MIRT446302 ACSL3 acyl-CoA synthetase long chain family member 3 2 2
MIRT446426 ABHD2 abhydrolase domain containing 2 2 2
MIRT447263 C3orf30 chromosome 3 open reading frame 30 2 2
MIRT447692 MTPAP mitochondrial poly(A) polymerase 2 2
MIRT447753 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT447883 LMAN1 lectin, mannose binding 1 2 2
MIRT448032 GSR glutathione-disulfide reductase 2 2
MIRT448155 P2RY10 purinergic receptor P2Y10 2 2
MIRT448215 SNAI2 snail family transcriptional repressor 2 2 2
MIRT448414 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT448890 DENND4C DENN domain containing 4C 2 2
MIRT449043 ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 2 2
MIRT449269 PALM2 paralemmin 2 2 2
MIRT449571 GPC5 glypican 5 2 4
MIRT450116 IMP3 IMP3, U3 small nucleolar ribonucleoprotein 2 2
MIRT450149 GABRB3 gamma-aminobutyric acid type A receptor beta3 subunit 2 2
MIRT450606 EXOC2 exocyst complex component 2 2 2
MIRT459247 ADRBK1 G protein-coupled receptor kinase 2 2 2
MIRT464464 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465114 TSC22D2 TSC22 domain family member 2 2 4
MIRT466778 SUZ12 SUZ12 polycomb repressive complex 2 subunit 2 4
MIRT467990 SKIL SKI like proto-oncogene 2 4
MIRT469263 RHOB ras homolog family member B 2 2
MIRT470717 POGK pogo transposable element derived with KRAB domain 2 2
MIRT472380 NEK7 NIMA related kinase 7 2 2
MIRT475022 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT475248 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 2
MIRT475678 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT479405 CDKN1B cyclin dependent kinase inhibitor 1B 2 10
MIRT482621 ABCE1 ATP binding cassette subfamily E member 1 2 2
MIRT490488 FEM1C fem-1 homolog C 2 2
MIRT492176 SOX4 SRY-box 4 2 10
MIRT493559 HSPA5 heat shock protein family A (Hsp70) member 5 2 2
MIRT494647 ARNTL aryl hydrocarbon receptor nuclear translocator like 2 2
MIRT497510 ZNF652 zinc finger protein 652 2 4
MIRT499150 HSPA1B heat shock protein family A (Hsp70) member 1B 2 8
MIRT502081 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT502824 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 6
MIRT503936 FBXL13 F-box and leucine rich repeat protein 13 2 4
MIRT504229 MYO6 myosin VI 2 2
MIRT506016 PURA purine rich element binding protein A 2 2
MIRT506416 NHLRC3 NHL repeat containing 3 2 6
MIRT508022 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT508293 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 4
MIRT508358 HES7 hes family bHLH transcription factor 7 2 6
MIRT510848 RARB retinoic acid receptor beta 2 6
MIRT511509 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT511980 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 4
MIRT512301 AMER1 APC membrane recruitment protein 1 2 6
MIRT515651 MYBPC1 myosin binding protein C, slow type 2 2
MIRT518423 SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 2 2
MIRT519692 ZNF620 zinc finger protein 620 2 2
MIRT521598 PSMA2 proteasome subunit alpha 2 2 4
MIRT527241 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT527279 FBLN2 fibulin 2 2 2
MIRT527377 MGARP mitochondria localized glutamic acid rich protein 2 2
MIRT527448 COL4A3 collagen type IV alpha 3 chain 2 2
MIRT528342 TBC1D22B TBC1 domain family member 22B 2 2
MIRT529098 ZNF100 zinc finger protein 100 2 2
MIRT529661 ZNF81 zinc finger protein 81 2 2
MIRT530057 TRIM72 tripartite motif containing 72 2 2
MIRT530271 MKRN3 makorin ring finger protein 3 2 2
MIRT530873 TRUB1 TruB pseudouridine synthase family member 1 2 2
MIRT531246 FANCC Fanconi anemia complementation group C 2 2
MIRT531408 TMEM18 transmembrane protein 18 2 2
MIRT534421 SEMA4F ssemaphorin 4F 2 2
MIRT534500 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT534765 RASGEF1A RasGEF domain family member 1A 2 2
MIRT534942 PTBP3 polypyrimidine tract binding protein 3 2 2
MIRT536972 HAS3 hyaluronan synthase 3 2 2
MIRT537633 ERI1 exoribonuclease 1 2 2
MIRT537720 ELK3 ELK3, ETS transcription factor 2 2
MIRT538772 CABLES1 Cdk5 and Abl enzyme substrate 1 2 2
MIRT540958 SLC25A43 solute carrier family 25 member 43 2 2
MIRT541274 GPC4 glypican 4 2 4
MIRT543347 ZNF829 zinc finger protein 829 2 2
MIRT543617 MFAP3 microfibril associated protein 3 2 2
MIRT543644 YY2 YY2 transcription factor 2 2
MIRT544227 GTF2B general transcription factor IIB 2 2
MIRT544413 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544939 SNCB synuclein beta 2 2
MIRT545321 SPC25 SPC25, NDC80 kinetochore complex component 2 2
MIRT546088 VEZF1 vascular endothelial zinc finger 1 2 2
MIRT548516 DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 2 2
MIRT548632 DAZAP1 DAZ associated protein 1 2 4
MIRT551028 SPPL3 signal peptide peptidase like 3 2 2
MIRT552058 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 4
MIRT553268 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT553297 TSPAN3 tetraspanin 3 2 2
MIRT553613 TM7SF3 transmembrane 7 superfamily member 3 2 2
MIRT554201 SLC35D1 solute carrier family 35 member D1 2 2
MIRT554795 RGPD4 RANBP2-like and GRIP domain containing 4 2 2
MIRT554838 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT555709 PDZD8 PDZ domain containing 8 2 2
MIRT556063 MTF2 metal response element binding transcription factor 2 2 4
MIRT557999 FAM160B1 family with sequence similarity 160 member B1 2 2
MIRT558674 CNIH cornichon family AMPA receptor auxiliary protein 1 1 1
MIRT558954 CBFB core-binding factor beta subunit 2 2
MIRT559026 C20orf24 chromosome 20 open reading frame 24 2 2
MIRT559103 C18orf25 chromosome 18 open reading frame 25 2 2
MIRT559858 GSKIP GSK3B interacting protein 2 2
MIRT561591 SKI SKI proto-oncogene 2 2
MIRT562262 GRB2 growth factor receptor bound protein 2 2 2
MIRT562413 EIF2S2 eukaryotic translation initiation factor 2 subunit beta 2 2
MIRT562646 ARID1A AT-rich interaction domain 1A 2 4
MIRT564273 DEPDC1B DEP domain containing 1B 2 2
MIRT565301 TMEM64 transmembrane protein 64 2 2
MIRT565392 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT566564 OTUD4 OTU deubiquitinase 4 2 2
MIRT566708 MTMR3 myotubularin related protein 3 2 2
MIRT566784 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT568411 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT571817 PHF19 PHD finger protein 19 2 2
MIRT571989 HOXA9 homeobox A9 2 2
MIRT573750 KHSRP KH-type splicing regulatory protein 2 2
MIRT573993 DDX21 DExD-box helicase 21 2 2
MIRT574488 RPS16 ribosomal protein S16 2 2
MIRT574507 PSAT1 phosphoserine aminotransferase 1 2 2
MIRT574553 NRBF2 nuclear receptor binding factor 2 2 2
MIRT576680 H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 2 2
MIRT608353 ZRANB1 zinc finger RANBP2-type containing 1 2 2
MIRT608634 ATP9A ATPase phospholipid transporting 9A (putative) 2 6
MIRT609179 ZNF581 zinc finger protein 581 2 2
MIRT609792 NHSL1 NHS like 1 2 2
MIRT610675 SYT2 synaptotagmin 2 2 4
MIRT610880 NUDCD3 NudC domain containing 3 2 2
MIRT611024 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT611670 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT612067 PDGFRA platelet derived growth factor receptor alpha 2 2
MIRT612486 SLC25A11 solute carrier family 25 member 11 2 2
MIRT612648 PSPC1 paraspeckle component 1 2 2
MIRT612688 PLXNA4 plexin A4 2 2
MIRT613108 ESR1 estrogen receptor 1 2 2
MIRT613549 AMPD3 adenosine monophosphate deaminase 3 2 2
MIRT614532 SUB1 SUB1 homolog, transcriptional regulator 2 2
MIRT614569 GMPR guanosine monophosphate reductase 2 2
MIRT614661 ZNF608 zinc finger protein 608 2 2
MIRT614675 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT615313 CCDC158 coiled-coil domain containing 158 2 2
MIRT616112 GGCX gamma-glutamyl carboxylase 2 2
MIRT617750 MICA MHC class I polypeptide-related sequence A 2 2
MIRT618797 ZIC2 Zic family member 2 2 2
MIRT619227 FUNDC2 FUN14 domain containing 2 2 2
MIRT620281 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT620491 XKR6 XK related 6 2 2
MIRT622613 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT622967 OXSR1 oxidative stress responsive 1 2 2
MIRT623482 KDM5A lysine demethylase 5A 2 2
MIRT623626 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT623699 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT624815 ADAM17 ADAM metallopeptidase domain 17 2 2
MIRT625188 GRIK4 glutamate ionotropic receptor kainate type subunit 4 2 2
MIRT625367 CDKL2 cyclin dependent kinase like 2 2 2
MIRT625919 GBP6 guanylate binding protein family member 6 2 2
MIRT625962 RNF2 ring finger protein 2 2 2
MIRT626264 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT626425 ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 2 2
MIRT626851 FDX1 ferredoxin 1 2 2
MIRT628014 MEF2C myocyte enhancer factor 2C 2 2
MIRT628047 LIMD1 LIM domains containing 1 2 2
MIRT628360 CCDC117 coiled-coil domain containing 117 2 2
MIRT628461 ANAPC16 anaphase promoting complex subunit 16 2 2
MIRT630929 UNC93A unc-93 homolog A 2 2
MIRT635226 CD59 CD59 molecule (CD59 blood group) 2 2
MIRT635478 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT638149 TTC26 tetratricopeptide repeat domain 26 2 2
MIRT638295 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT638431 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT640275 TCF24 transcription factor 24 2 2
MIRT641183 STX4 syntaxin 4 2 2
MIRT642295 ZNF99 zinc finger protein 99 2 2
MIRT643270 ZNF566 zinc finger protein 566 2 2
MIRT643581 CTNNA3 catenin alpha 3 2 2
MIRT644173 GIN1 gypsy retrotransposon integrase 1 2 2
MIRT644433 VDR vitamin D receptor 2 2
MIRT644614 C17orf77 chromosome 17 open reading frame 77 2 2
MIRT644855 PGM2 phosphoglucomutase 2 2 2
MIRT645449 ATF6B activating transcription factor 6 beta 2 2
MIRT647203 ZNF583 zinc finger protein 583 2 2
MIRT649421 CDC14B cell division cycle 14B 2 2
MIRT650499 UFM1 ubiquitin fold modifier 1 2 2
MIRT650695 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT651209 ZNF280B zinc finger protein 280B 2 2
MIRT653782 SIX4 SIX homeobox 4 2 2
MIRT655057 PKN2 protein kinase N2 2 2
MIRT655707 NUDT21 nudix hydrolase 21 2 2
MIRT656943 KIAA1456 KIAA1456 2 2
MIRT658275 FAXC failed axon connections homolog 2 2
MIRT658519 ETV3 ETS variant 3 2 2
MIRT658655 ENAH ENAH, actin regulator 2 2
MIRT658688 EMP2 epithelial membrane protein 2 2 2
MIRT659241 CXCR5 C-X-C motif chemokine receptor 5 2 2
MIRT659289 CTDSPL2 CTD small phosphatase like 2 2 2
MIRT660101 BTBD3 BTB domain containing 3 2 2
MIRT660463 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT663648 INTU inturned planar cell polarity protein 2 2
MIRT664065 KIAA1551 KIAA1551 2 2
MIRT666140 SPATS2L spermatogenesis associated serine rich 2 like 2 2
MIRT675549 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT684998 RPL10A ribosomal protein L10a 2 2
MIRT685687 TRIM45 tripartite motif containing 45 2 2
MIRT687485 NHLRC2 NHL repeat containing 2 2 2
MIRT687799 KCNJ15 potassium voltage-gated channel subfamily J member 15 2 2
MIRT687911 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT687962 HHIP hedgehog interacting protein 2 2
MIRT689214 ZNF574 zinc finger protein 574 2 2
MIRT689481 SCIMP SLP adaptor and CSK interacting membrane protein 2 2
MIRT690495 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT692284 XRN2 5'-3' exoribonuclease 2 2 2
MIRT693054 KIAA1324 KIAA1324 2 2
MIRT697437 ZFHX3 zinc finger homeobox 3 2 2
MIRT698469 TJP1 tight junction protein 1 2 2
MIRT699027 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699779 SEMA4D semaphorin 4D 2 2
MIRT701863 MRO maestro 2 2
MIRT702152 MAP3K1 mitogen-activated protein kinase kinase kinase 1 2 2
MIRT702235 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT703744 FAM126B family with sequence similarity 126 member B 2 2
MIRT704271 DGS2 DiGeorge syndrome/velocardiofacial syndrome complex 2 2 2
MIRT707745 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT709855 SNX12 sorting nexin 12 2 2
MIRT712741 LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 2 2
MIRT712948 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT713142 PKIA cAMP-dependent protein kinase inhibitor alpha 2 2
MIRT715529 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT718275 ZNF749 zinc finger protein 749 2 2
MIRT720146 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT722713 ZNF460 zinc finger protein 460 2 2
MIRT723253 TMLHE trimethyllysine hydroxylase, epsilon 2 2
MIRT724240 DGKE diacylglycerol kinase epsilon 2 2
MIRT725076 WTIP WT1 interacting protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548ah-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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