pre-miRNA Information
pre-miRNA hsa-mir-548ah   
Genomic Coordinates chr4: 76575551 - 76575626
Description Homo sapiens miR-548ah stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548ah-3p
Sequence 47| CAAAAACUGCAGUUACUUUUGC |68
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 4 + 76575599 29233923 MiREDiBase
A-to-I 4 4 + 76575600 29233923 MiREDiBase
A-to-I 5 4 + 76575601 29233923 MiREDiBase
A-to-I 6 4 + 76575602 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1486932451 12 dbSNP
rs1036377818 16 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ACSL3   
Synonyms ACS3, FACL3, LACS 3, LACS3, PRO2194
Description acyl-CoA synthetase long chain family member 3
Transcript NM_004457   
Other Transcripts NM_203372   
Expression
Putative miRNA Targets on ACSL3
3'UTR of ACSL3
(miRNA target sites are highlighted)
>ACSL3|NM_004457|3'UTR
   1 TTATTCTCTTCTGGCATCAGTTTGCTACAGTGAGCTCAGATCAAATAGGAAAATACTTGAAATGCATGTCTCAAGCTGCA
  81 AGGCAAACTCCATTCCTCATATTAAACTATTACTTCTCATGACGTCACCATTTTTAACTGACAGGATTAGTAAAACATTA
 161 AGACAGCAAACTTGTGTCTGTCTCTTCTTTCATTTTCCCCGCCACCAACTTACTTTACCACCTATGACTGTACTTGTCAG
 241 TATGAGAATTTTTCTGAATCATATTGGGGAAGCAGTGATTTTAAAACCTCAAGTTTTTAAACATGATTTATATGTTCTGT
 321 ATAATGTTCAGTTTGTAACTTTTTAAAAGTTTGGATGTATAGAGGGATAAATAGGAAATATAAGAATTGGTTATTTGGGG
 401 GCTTTTTTACTTACTGTATTTAAAAATACAAGGGTATTGATATGAAATTATGTAAATTTCAAATGCTTATGAATCAAATC
 481 ATTGTTGAACAAAAGATTTGTTGCTGTGTAATTATTGTCTTGTATGCATTTGAGAGAAATAAATATACCCATACTTATGT
 561 TTTAAGAAGTTGAGATCTTGTGAATATATGCCTGTCAGTGTCTTCTTTATATATTTATTTTTTATTAGAAAAAATGAAGT
 641 TTGGTTGGTGATGCATGAAACAAAATAGCAAGAGAGGGTTATAGTTTAATAGTAAGGGAGATAACACAGCATGTGTAGCA
 721 CCAGTTGATAATTGGTCTCTAGTAGCTTACTGTCAAAATGTTCAATGAAGTCTTCTGTTCATCTGTTGAAACTAGGAAAA
 801 TACCCAAACTTAAATGGAAGAATTCTGAAAGAGAGGATAGAATTTAAAGAACAAGAGTATATAAAGTTATTCTTTGAATA
 881 TTTCGTTGACTATATGTACATTGAGTTATCTATATTTGTAAACAAATTAGTCATGGAAAATTATTCTATCTCAAAGTCTC
 961 CTTTTAGTCTAGATAATCATTATTTCATTTTAAAATTAGTGTTTTTCCTAGTTTGCACTGATGCGTGTATGGATGTGTGT
1041 GAGTCAGTGGTAGCTTATTTAAAAAGCACCTTATCCTTTCTCCCATAACCTTTGTACACTAAAAAATGAAAGAATTTAGA
1121 ATGTATTTGATGATAGCATTCTCACTAAGACACATGAGAATTTAACTTTATAACCGCGTGAGTTAAGATTTAATTCATAG
1201 GTTTTGATGTCATTGTTGAAGTTATTTGTAATTCAGAAACCTTGCTTGTGTGATACATAGTCTCTTCATTTATTACTGCT
1281 TGTCTGTTGTTATATCTGGATTATCAAAAGCAATAGTGCACCAATTAAGATGTGCTCAAATCAGGACTTAAATCATAGGC
1361 ACCACATTTTTCATGTCAGACTAGTTACTTTGTTGATTCTCAGTTACTGTAGGCATCAAAAGGCAAAAATCAAAAAAAAA
1441 AAAAACAAAAACAAAAAAAAAGATGAACCTAGGTCTGTGTAAAGTAAGGGGAGTGTTAGGAGCAGCCAGGACTGTGTAGT
1521 GTGTGTTTGGTTGCATCACAAACATCGTATGTGGAGACATTGCAATACAGTGTTTTTTGTTTTCAACTTTTCTTGTATTG
1601 TATATTTGTATTATGTTTTGAATGCTTTTCTCTTTTCATAATTAAATATTAATGTTTGGGATAACTGCCAAGAAGAAGTA
1681 AAAATATTGAATGGAACTTCTATATGAGGATGCTGTGATCTAAAAATTAAATCTCAGTGGGCGGAGAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cgUUUUCAUUGACGUCAAAAAc 5'
            ||:||||  |  |||| || 
Target 5' acAAGAGTATATAAAGTTATTc 3'
851 - 872 132.00 -9.26
2
miRNA  3' cgUUUUCAU-UGACGUCAAAAAc 5'
            :| | |: | | |||| ||| 
Target 5' gaGACATTGCAATACAGTGTTTt 3'
1554 - 1576 120.00 -9.00
3
miRNA  3' cguUUUCAUUGACGUCAAAAac 5'
             |||||||  | ||| ||  
Target 5' tgtAAAGTAAGGGGAGTGTTag 3'
1478 - 1499 119.00 -8.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN28883767 3 COSMIC
COSN506729 8 COSMIC
COSN31500825 19 COSMIC
COSN31508526 97 COSMIC
COSN6171496 110 COSMIC
COSN31514807 160 COSMIC
COSN31529433 247 COSMIC
COSN31596034 266 COSMIC
COSN31514878 409 COSMIC
COSN14439299 435 COSMIC
COSN6941211 495 COSMIC
COSN31610828 593 COSMIC
COSN6171497 746 COSMIC
COSN32063887 911 COSMIC
COSN5498491 937 COSMIC
COSN29369870 1090 COSMIC
COSN20097852 1262 COSMIC
COSN23050182 1369 COSMIC
COSN26082623 1441 COSMIC
COSN20097858 1446 COSMIC
COSN20097860 1456 COSMIC
COSN27706849 1456 COSMIC
COSN20097862 1600 COSMIC
COSN21787855 2266 COSMIC
COSN15717069 2315 COSMIC
COSN20666748 2344 COSMIC
COSN18890583 2700 COSMIC
COSN1827713 2849 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs774055604 1 dbSNP
rs1338508175 4 dbSNP
rs1324170090 5 dbSNP
rs1373381782 7 dbSNP
rs1235132358 10 dbSNP
rs1269734616 11 dbSNP
rs1396539862 13 dbSNP
rs1337525326 15 dbSNP
rs746866575 16 dbSNP
rs770694614 19 dbSNP
rs1451405226 21 dbSNP
rs1212136724 22 dbSNP
rs781151470 24 dbSNP
rs1468601664 28 dbSNP
rs528700494 29 dbSNP
rs768641079 37 dbSNP
rs1476103808 43 dbSNP
rs774431863 46 dbSNP
rs761946654 49 dbSNP
rs772406735 53 dbSNP
rs1371441535 58 dbSNP
rs1163216624 67 dbSNP
rs1456672047 74 dbSNP
rs963763357 87 dbSNP
rs975095317 88 dbSNP
rs1419073892 91 dbSNP
rs1250410843 92 dbSNP
rs545366745 96 dbSNP
rs1309354148 102 dbSNP
rs1252024176 108 dbSNP
rs1320207594 109 dbSNP
rs564905187 110 dbSNP
rs983046412 110 dbSNP
rs966227785 114 dbSNP
rs1266154050 115 dbSNP
rs571899451 117 dbSNP
rs541141828 119 dbSNP
rs1328453663 124 dbSNP
rs560999906 125 dbSNP
rs1203571800 129 dbSNP
rs529792911 131 dbSNP
rs1351211728 140 dbSNP
rs776270007 143 dbSNP
rs868709613 147 dbSNP
rs1302725472 158 dbSNP
rs950635052 159 dbSNP
rs1385317487 164 dbSNP
rs758665090 166 dbSNP
rs547434673 194 dbSNP
rs545682781 198 dbSNP
rs1453649769 200 dbSNP
rs145290953 201 dbSNP
rs1162040979 202 dbSNP
rs1473253580 205 dbSNP
rs1412071160 216 dbSNP
rs959180413 220 dbSNP
rs1422948410 221 dbSNP
rs1449571454 222 dbSNP
rs1269173730 236 dbSNP
rs990685130 238 dbSNP
rs1210250061 242 dbSNP
rs918005352 243 dbSNP
rs893796836 247 dbSNP
rs1230168876 255 dbSNP
rs1011944189 256 dbSNP
rs1369743509 265 dbSNP
rs949503596 265 dbSNP
rs1020184700 266 dbSNP
rs1302378464 276 dbSNP
rs1042357434 293 dbSNP
rs1323059433 300 dbSNP
rs923948404 304 dbSNP
rs1458288573 310 dbSNP
rs936898511 311 dbSNP
rs1053943558 318 dbSNP
rs890063410 320 dbSNP
rs1171533603 353 dbSNP
rs563464749 355 dbSNP
rs903046245 362 dbSNP
rs1008079438 367 dbSNP
rs1019436980 368 dbSNP
rs367982403 374 dbSNP
rs1245972661 380 dbSNP
rs1210511587 381 dbSNP
rs1041613190 382 dbSNP
rs1277975595 394 dbSNP
rs996564502 402 dbSNP
rs1275612709 403 dbSNP
rs1347260882 403 dbSNP
rs1027100606 408 dbSNP
rs1363460134 413 dbSNP
rs952393958 413 dbSNP
rs769174858 417 dbSNP
rs1377213467 429 dbSNP
rs1395719439 430 dbSNP
rs901561255 432 dbSNP
rs997689773 435 dbSNP
rs1025956232 438 dbSNP
rs532448229 440 dbSNP
rs983468155 441 dbSNP
rs1388080176 443 dbSNP
rs1190328169 444 dbSNP
rs1396492507 447 dbSNP
rs1449972660 463 dbSNP
rs950344748 466 dbSNP
rs908806517 473 dbSNP
rs552142589 475 dbSNP
rs1274478124 481 dbSNP
rs1279503440 482 dbSNP
rs1204683746 485 dbSNP
rs970928615 486 dbSNP
rs1016181854 488 dbSNP
rs959314193 492 dbSNP
rs1343570287 493 dbSNP
rs982247348 495 dbSNP
rs926757026 496 dbSNP
rs1207057922 497 dbSNP
rs1356115503 501 dbSNP
rs938130195 507 dbSNP
rs750232792 515 dbSNP
rs1341741530 521 dbSNP
rs1482710398 526 dbSNP
rs990611716 534 dbSNP
rs758198666 537 dbSNP
rs1053870987 538 dbSNP
rs1410277238 539 dbSNP
rs779748585 539 dbSNP
rs1412819505 540 dbSNP
rs1161385742 549 dbSNP
rs1473768857 552 dbSNP
rs55877777 559 dbSNP
rs1482130306 560 dbSNP
rs1254181788 569 dbSNP
rs1206150814 578 dbSNP
rs945386326 579 dbSNP
rs531507941 580 dbSNP
rs1240745943 584 dbSNP
rs1357740051 585 dbSNP
rs1293335352 587 dbSNP
rs1173671870 592 dbSNP
rs978598649 593 dbSNP
rs903120949 595 dbSNP
rs1008110513 604 dbSNP
rs1309408670 608 dbSNP
rs1358313154 610 dbSNP
rs1448524301 615 dbSNP
rs1040908562 618 dbSNP
rs1303576139 622 dbSNP
rs924070593 626 dbSNP
rs899660539 629 dbSNP
rs1385281092 630 dbSNP
rs936661386 652 dbSNP
rs1158358918 663 dbSNP
rs376987836 679 dbSNP
rs1414281211 688 dbSNP
rs1177997388 691 dbSNP
rs911437649 696 dbSNP
rs942964037 699 dbSNP
rs780628207 702 dbSNP
rs1452581685 704 dbSNP
rs952539537 704 dbSNP
rs1003900690 706 dbSNP
rs1015635120 711 dbSNP
rs748717783 714 dbSNP
rs533908786 716 dbSNP
rs982319595 718 dbSNP
rs1277143187 721 dbSNP
rs901356941 725 dbSNP
rs1438283083 729 dbSNP
rs547368882 732 dbSNP
rs1319726850 733 dbSNP
rs959511211 736 dbSNP
rs990002260 738 dbSNP
rs548341077 740 dbSNP
rs191179323 742 dbSNP
rs945431027 743 dbSNP
rs1463322967 744 dbSNP
rs1187358065 747 dbSNP
rs181119357 750 dbSNP
rs556377904 752 dbSNP
rs1450819908 756 dbSNP
rs911863435 757 dbSNP
rs569873367 775 dbSNP
rs1005886987 776 dbSNP
rs1189360457 786 dbSNP
rs1207371752 795 dbSNP
rs1040980591 796 dbSNP
rs1269444687 812 dbSNP
rs899696424 814 dbSNP
rs1311122718 821 dbSNP
rs1220601489 830 dbSNP
rs1275990017 830 dbSNP
rs996704782 834 dbSNP
rs1178038740 835 dbSNP
rs1408568065 852 dbSNP
rs1432783410 853 dbSNP
rs1455880640 853 dbSNP
rs1015938214 857 dbSNP
rs1289408889 859 dbSNP
rs1319944342 861 dbSNP
rs539320659 879 dbSNP
rs16864237 885 dbSNP
rs1046108 886 dbSNP
rs1178423836 893 dbSNP
rs1435648185 895 dbSNP
rs1389917425 897 dbSNP
rs1015292487 901 dbSNP
rs1024783453 906 dbSNP
rs970946756 907 dbSNP
rs1003771882 908 dbSNP
rs1212560235 913 dbSNP
rs1348216878 915 dbSNP
rs1273617039 924 dbSNP
rs1225854019 928 dbSNP
rs977978400 929 dbSNP
rs1220176258 931 dbSNP
rs1285634094 937 dbSNP
rs1377064055 942 dbSNP
rs1304710418 947 dbSNP
rs1415591174 947 dbSNP
rs1370143035 948 dbSNP
rs1166973508 949 dbSNP
rs386655545 950 dbSNP
rs879292332 950 dbSNP
rs1046109 951 dbSNP
rs4674729 952 dbSNP
rs1422641158 954 dbSNP
rs190380376 962 dbSNP
rs371168012 962 dbSNP
rs1189498979 964 dbSNP
rs1485732948 965 dbSNP
rs1268406735 966 dbSNP
rs989407109 970 dbSNP
rs1202606181 974 dbSNP
rs1251743127 979 dbSNP
rs772537052 979 dbSNP
rs749684786 981 dbSNP
rs543503218 988 dbSNP
rs1246044011 996 dbSNP
rs1295085359 1001 dbSNP
rs771264122 1002 dbSNP
rs4674730 1009 dbSNP
rs1195686325 1012 dbSNP
rs1201276762 1012 dbSNP
rs1306334064 1012 dbSNP
rs1411976827 1018 dbSNP
rs1397638648 1019 dbSNP
rs922907729 1025 dbSNP
rs532182567 1026 dbSNP
rs376473459 1033 dbSNP
rs1475216358 1034 dbSNP
rs546096163 1036 dbSNP
rs182934895 1038 dbSNP
rs1179566036 1039 dbSNP
rs1420568350 1042 dbSNP
rs1472154391 1043 dbSNP
rs140883381 1044 dbSNP
rs1389659640 1045 dbSNP
rs879250154 1056 dbSNP
rs1321729922 1061 dbSNP
rs1487394964 1066 dbSNP
rs1052295670 1068 dbSNP
rs974712523 1083 dbSNP
rs528361942 1090 dbSNP
rs1037341583 1094 dbSNP
rs1241423922 1099 dbSNP
rs1336623194 1106 dbSNP
rs894831523 1107 dbSNP
rs771920655 1113 dbSNP
rs1393351633 1123 dbSNP
rs1011935764 1128 dbSNP
rs932520225 1137 dbSNP
rs775197724 1142 dbSNP
rs1025296073 1145 dbSNP
rs1387263077 1154 dbSNP
rs1156383286 1155 dbSNP
rs1454921746 1156 dbSNP
rs1305514425 1161 dbSNP
rs1363967480 1174 dbSNP
rs187485953 1176 dbSNP
rs1431168082 1177 dbSNP
rs1254728650 1178 dbSNP
rs1194166897 1179 dbSNP
rs999762427 1192 dbSNP
rs1030801952 1213 dbSNP
rs958087925 1224 dbSNP
rs34965512 1225 dbSNP
rs567310156 1237 dbSNP
rs530141723 1243 dbSNP
rs939823289 1244 dbSNP
rs1231342802 1248 dbSNP
rs549815055 1249 dbSNP
rs1304702736 1254 dbSNP
rs199553783 1258 dbSNP
rs33980054 1258 dbSNP
rs10623105 1259 dbSNP
rs200572134 1259 dbSNP
rs56892881 1259 dbSNP
rs201774916 1263 dbSNP
rs1226112549 1265 dbSNP
rs1401880480 1265 dbSNP
rs964378614 1265 dbSNP
rs1385056529 1268 dbSNP
rs906235143 1272 dbSNP
rs976814670 1280 dbSNP
rs768219721 1284 dbSNP
rs372759402 1285 dbSNP
rs922843102 1287 dbSNP
rs1174068470 1291 dbSNP
rs190806793 1294 dbSNP
rs1033285786 1295 dbSNP
rs1195256405 1305 dbSNP
rs1224563957 1323 dbSNP
rs1255646472 1325 dbSNP
rs1198936703 1328 dbSNP
rs895404831 1329 dbSNP
rs1281458101 1333 dbSNP
rs1482565512 1338 dbSNP
rs1011542290 1350 dbSNP
rs983319590 1354 dbSNP
rs910064304 1357 dbSNP
rs567464353 1359 dbSNP
rs1326492839 1363 dbSNP
rs796518037 1364 dbSNP
rs1412502624 1366 dbSNP
rs1037435378 1368 dbSNP
rs1471305204 1380 dbSNP
rs1161518103 1384 dbSNP
rs916360564 1389 dbSNP
rs184235995 1391 dbSNP
rs559086102 1395 dbSNP
rs1169578721 1402 dbSNP
rs1046101908 1409 dbSNP
rs566292044 1410 dbSNP
rs999463692 1412 dbSNP
rs1165948499 1414 dbSNP
rs1369260914 1418 dbSNP
rs1409587235 1420 dbSNP
rs1309091393 1425 dbSNP
rs1337129447 1430 dbSNP
rs1482273737 1430 dbSNP
rs1215644109 1431 dbSNP
rs868343321 1431 dbSNP
rs966094437 1431 dbSNP
rs11331027 1432 dbSNP
rs1230876253 1432 dbSNP
rs1352534354 1432 dbSNP
rs1491077485 1432 dbSNP
rs201716563 1432 dbSNP
rs758767977 1432 dbSNP
rs1445422674 1433 dbSNP
rs1330706205 1434 dbSNP
rs1410437181 1437 dbSNP
rs974743446 1438 dbSNP
rs796341788 1439 dbSNP
rs1283257059 1440 dbSNP
rs1476187900 1441 dbSNP
rs535318987 1441 dbSNP
rs1471761464 1442 dbSNP
rs879783704 1442 dbSNP
rs1356387784 1443 dbSNP
rs147988135 1443 dbSNP
rs768057487 1443 dbSNP
rs1216103911 1444 dbSNP
rs1336299604 1444 dbSNP
rs377288450 1444 dbSNP
rs1293437652 1445 dbSNP
rs60896489 1445 dbSNP
rs796420880 1445 dbSNP
rs879838891 1445 dbSNP
rs1227377345 1446 dbSNP
rs17838618 1446 dbSNP
rs1071621 1447 dbSNP
rs370508575 1447 dbSNP
rs146569571 1449 dbSNP
rs9288578 1449 dbSNP
rs35119789 1450 dbSNP
rs201380865 1453 dbSNP
rs754764759 1453 dbSNP
rs1247534807 1454 dbSNP
rs199954133 1456 dbSNP
rs201630848 1456 dbSNP
rs148723768 1457 dbSNP
rs66647824 1457 dbSNP
rs1178012662 1458 dbSNP
rs1477867285 1460 dbSNP
rs1341434896 1463 dbSNP
rs1205600847 1464 dbSNP
rs1251596681 1469 dbSNP
rs1196037671 1470 dbSNP
rs1469348118 1471 dbSNP
rs1252470309 1482 dbSNP
rs1207511583 1491 dbSNP
rs921894474 1492 dbSNP
rs932618076 1493 dbSNP
rs1185645369 1495 dbSNP
rs1237127405 1497 dbSNP
rs1301037270 1500 dbSNP
rs1442971523 1508 dbSNP
rs984440881 1512 dbSNP
rs1445254801 1519 dbSNP
rs772560663 1524 dbSNP
rs1347047128 1526 dbSNP
rs1165616347 1528 dbSNP
rs1160101344 1540 dbSNP
rs554616151 1547 dbSNP
rs574440752 1548 dbSNP
rs939834914 1557 dbSNP
rs1036799348 1560 dbSNP
rs1168829235 1561 dbSNP
rs893624343 1566 dbSNP
rs1185288481 1567 dbSNP
rs570315004 1570 dbSNP
rs1243400810 1575 dbSNP
rs1018306652 1580 dbSNP
rs1311292536 1581 dbSNP
rs1277785795 1584 dbSNP
rs906313597 1593 dbSNP
rs1348337609 1594 dbSNP
rs58567926 1598 dbSNP
rs75951945 1598 dbSNP
rs78267146 1598 dbSNP
rs66562269 1599 dbSNP
rs201131326 1601 dbSNP
rs939066793 1603 dbSNP
rs1447539889 1605 dbSNP
rs1373828996 1614 dbSNP
rs1315039282 1615 dbSNP
rs1364346335 1625 dbSNP
rs1228997606 1633 dbSNP
rs1435667940 1637 dbSNP
rs1390015506 1649 dbSNP
rs1168934200 1655 dbSNP
rs1430855366 1662 dbSNP
rs1420985260 1668 dbSNP
rs1054729341 1670 dbSNP
rs894796109 1687 dbSNP
rs998555304 1688 dbSNP
rs772311095 1692 dbSNP
rs187569178 1697 dbSNP
rs1485874606 1698 dbSNP
rs1250608905 1703 dbSNP
rs1199675877 1710 dbSNP
rs115679023 1715 dbSNP
rs910159575 1732 dbSNP
rs1296249446 1733 dbSNP
rs1227766860 1739 dbSNP
rs962855550 1742 dbSNP
rs991688395 1743 dbSNP
rs760784115 1744 dbSNP
rs576858335 1745 dbSNP
rs1046459753 1748 dbSNP
rs1463880248 1749 dbSNP
rs192736777 1749 dbSNP
rs559493800 1762 dbSNP
rs1164705946 1768 dbSNP
rs1474555590 1771 dbSNP
rs1415113284 1774 dbSNP
rs1189611363 1784 dbSNP
rs1475359473 1799 dbSNP
rs1249521604 1801 dbSNP
rs1193821824 1803 dbSNP
rs1481508316 1805 dbSNP
rs1477209330 1806 dbSNP
rs952122442 1807 dbSNP
rs1406346456 1811 dbSNP
rs935017614 1816 dbSNP
rs1275177128 1820 dbSNP
rs1335353376 1822 dbSNP
rs1470773006 1824 dbSNP
rs749356276 1829 dbSNP
rs909801959 1830 dbSNP
rs75583089 1831 dbSNP
rs1293453673 1839 dbSNP
rs972545582 1843 dbSNP
rs1297567373 1844 dbSNP
rs765135459 1845 dbSNP
rs1329332005 1850 dbSNP
rs549476675 1867 dbSNP
rs1166519115 1876 dbSNP
rs1461538337 1878 dbSNP
rs1232256328 1891 dbSNP
rs893759758 1893 dbSNP
rs1179245807 1901 dbSNP
rs145575171 1903 dbSNP
rs1420588509 1908 dbSNP
rs1251043562 1920 dbSNP
rs1192903329 1921 dbSNP
rs765144322 1934 dbSNP
rs1467111412 1936 dbSNP
rs1254844743 1937 dbSNP
rs1214345411 1939 dbSNP
rs1275265361 1940 dbSNP
rs927768679 1941 dbSNP
rs1324512819 1942 dbSNP
rs939140357 1943 dbSNP
rs1241527782 1945 dbSNP
rs1054800072 1950 dbSNP
rs916273405 1950 dbSNP
rs946361851 1951 dbSNP
rs1373780868 1955 dbSNP
rs1039516348 1966 dbSNP
rs1043374539 1968 dbSNP
rs1440935171 1977 dbSNP
rs184567797 1981 dbSNP
rs995148967 1992 dbSNP
rs902766898 1996 dbSNP
rs1364126290 1997 dbSNP
rs1172735995 2007 dbSNP
rs187257468 2011 dbSNP
rs373984622 2015 dbSNP
rs773196127 2021 dbSNP
rs1446495309 2022 dbSNP
rs1259809424 2023 dbSNP
rs35218915 2027 dbSNP
rs1207098917 2029 dbSNP
rs10755042 2030 dbSNP
rs549878216 2031 dbSNP
rs1040598960 2041 dbSNP
rs1430363668 2041 dbSNP
rs887096960 2043 dbSNP
rs902007599 2047 dbSNP
rs1315657507 2051 dbSNP
rs570085453 2054 dbSNP
rs1360709968 2059 dbSNP
rs1156420558 2060 dbSNP
rs148847153 2061 dbSNP
rs1453840134 2062 dbSNP
rs10755043 2066 dbSNP
rs1475071814 2067 dbSNP
rs1371376184 2068 dbSNP
rs1195369707 2070 dbSNP
rs1388450976 2082 dbSNP
rs1386190892 2099 dbSNP
rs1303711541 2103 dbSNP
rs952132199 2105 dbSNP
rs991615002 2109 dbSNP
rs1006654663 2114 dbSNP
rs1281569539 2122 dbSNP
rs1195696679 2126 dbSNP
rs1337967538 2128 dbSNP
rs1272449734 2129 dbSNP
rs1228894499 2138 dbSNP
rs1340600360 2139 dbSNP
rs1347115847 2139 dbSNP
rs1023148969 2144 dbSNP
rs1377025469 2145 dbSNP
rs1334618248 2147 dbSNP
rs530308791 2148 dbSNP
rs754581222 2149 dbSNP
rs376094881 2154 dbSNP
rs972619449 2155 dbSNP
rs1417329936 2162 dbSNP
rs1186064752 2164 dbSNP
rs981868988 2168 dbSNP
rs927734710 2170 dbSNP
rs1181473162 2171 dbSNP
rs771271817 2171 dbSNP
rs960511655 2172 dbSNP
rs990558449 2173 dbSNP
rs934990744 2174 dbSNP
rs1317984076 2176 dbSNP
rs1487777263 2181 dbSNP
rs566225516 2215 dbSNP
rs1356931001 2218 dbSNP
rs915120914 2233 dbSNP
rs1270241914 2236 dbSNP
rs946447730 2239 dbSNP
rs1441139620 2246 dbSNP
rs1043792812 2250 dbSNP
rs946643807 2255 dbSNP
rs1039482469 2256 dbSNP
rs1393808298 2259 dbSNP
rs1162826544 2262 dbSNP
rs370378244 2265 dbSNP
rs751820011 2265 dbSNP
rs1414725333 2266 dbSNP
rs899682916 2273 dbSNP
rs1419344091 2278 dbSNP
rs933841522 2281 dbSNP
rs1040628683 2293 dbSNP
rs1183137116 2295 dbSNP
rs1251716749 2299 dbSNP
rs577725421 2299 dbSNP
rs1211225006 2300 dbSNP
rs902040070 2302 dbSNP
rs887222553 2304 dbSNP
rs1336326819 2305 dbSNP
rs1290066867 2313 dbSNP
rs1222921791 2316 dbSNP
rs1348261539 2318 dbSNP
rs1366153242 2318 dbSNP
rs567233779 2320 dbSNP
rs932149364 2322 dbSNP
rs1164054069 2323 dbSNP
rs1447391410 2325 dbSNP
rs755087564 2327 dbSNP
rs898713759 2337 dbSNP
rs1013194829 2338 dbSNP
rs1158637494 2339 dbSNP
rs1399226335 2343 dbSNP
rs112606286 2349 dbSNP
rs1023664139 2354 dbSNP
rs1410579357 2356 dbSNP
rs1407750876 2359 dbSNP
rs1307250739 2375 dbSNP
rs1159588569 2377 dbSNP
rs1454125368 2380 dbSNP
rs887864464 2393 dbSNP
rs1196060341 2394 dbSNP
rs1006273875 2396 dbSNP
rs971578668 2398 dbSNP
rs1246846414 2408 dbSNP
rs1214610156 2410 dbSNP
rs1444967366 2413 dbSNP
rs767122575 2415 dbSNP
rs1034773963 2417 dbSNP
rs1015374826 2429 dbSNP
rs897829218 2432 dbSNP
rs1346885143 2436 dbSNP
rs1392231310 2437 dbSNP
rs956458901 2438 dbSNP
rs994069409 2455 dbSNP
rs1319936421 2457 dbSNP
rs1288405157 2458 dbSNP
rs1245361256 2465 dbSNP
rs987734541 2467 dbSNP
rs1293126755 2471 dbSNP
rs1362302600 2473 dbSNP
rs1347135990 2481 dbSNP
rs548872939 2482 dbSNP
rs1269201911 2486 dbSNP
rs1203418002 2491 dbSNP
rs1034888601 2494 dbSNP
rs1434419782 2495 dbSNP
rs1374098621 2499 dbSNP
rs914921088 2501 dbSNP
rs1176069050 2506 dbSNP
rs1434305943 2507 dbSNP
rs1425225097 2510 dbSNP
rs1178534345 2511 dbSNP
rs1185394482 2519 dbSNP
rs1474146877 2520 dbSNP
rs1253646009 2542 dbSNP
rs1264795443 2543 dbSNP
rs1216969611 2547 dbSNP
rs960582919 2550 dbSNP
rs991079752 2559 dbSNP
rs946611117 2561 dbSNP
rs192028309 2569 dbSNP
rs975337839 2574 dbSNP
rs921208833 2575 dbSNP
rs933829320 2589 dbSNP
rs1387005462 2592 dbSNP
rs968235110 2595 dbSNP
rs1279076474 2596 dbSNP
rs1051406545 2603 dbSNP
rs1414460664 2606 dbSNP
rs1374006954 2611 dbSNP
rs1315238489 2617 dbSNP
rs1167701494 2619 dbSNP
rs1466906871 2621 dbSNP
rs1354400150 2625 dbSNP
rs887149937 2627 dbSNP
rs1407707114 2628 dbSNP
rs1425218216 2631 dbSNP
rs1193904249 2636 dbSNP
rs940093171 2637 dbSNP
rs1254997918 2639 dbSNP
rs923623912 2640 dbSNP
rs1038357407 2646 dbSNP
rs568080856 2652 dbSNP
rs898482365 2663 dbSNP
rs1300059008 2665 dbSNP
rs1377324062 2666 dbSNP
rs1320081190 2677 dbSNP
rs1258854936 2680 dbSNP
rs1012953061 2681 dbSNP
rs537081696 2683 dbSNP
rs1452005910 2689 dbSNP
rs1433625908 2693 dbSNP
rs975715637 2698 dbSNP
rs6547 2700 dbSNP
rs117547312 2704 dbSNP
rs1445049848 2707 dbSNP
rs1003003863 2708 dbSNP
rs1226777401 2714 dbSNP
rs111322106 2718 dbSNP
rs1308380602 2722 dbSNP
rs552899052 2727 dbSNP
rs1009288924 2728 dbSNP
rs1249630075 2730 dbSNP
rs1431514205 2731 dbSNP
rs1036431376 2735 dbSNP
rs897859808 2745 dbSNP
rs1238752812 2748 dbSNP
rs1022023272 2749 dbSNP
rs1460647562 2750 dbSNP
rs1267447981 2758 dbSNP
rs967673740 2759 dbSNP
rs1316672285 2768 dbSNP
rs1305360483 2773 dbSNP
rs370066954 2776 dbSNP
rs1225863104 2788 dbSNP
rs1378235176 2789 dbSNP
rs975518610 2790 dbSNP
rs1035631472 2799 dbSNP
rs1439436529 2802 dbSNP
rs1391734168 2805 dbSNP
rs572945439 2806 dbSNP
rs1458141653 2810 dbSNP
rs1447152858 2812 dbSNP
rs1156623518 2814 dbSNP
rs1441341290 2827 dbSNP
rs1467181414 2828 dbSNP
rs184483592 2828 dbSNP
rs1269618374 2832 dbSNP
rs986615676 2848 dbSNP
rs749750303 2849 dbSNP
rs1430074157 2851 dbSNP
rs1485641264 2857 dbSNP
rs1012158030 2860 dbSNP
rs1242694830 2861 dbSNP
rs1023927546 2863 dbSNP
rs908386379 2868 dbSNP
rs757719432 2879 dbSNP
rs1038451642 2886 dbSNP
rs760766768 2886 dbSNP
rs1030768065 2887 dbSNP
rs1383738371 2899 dbSNP
rs1469527012 2902 dbSNP
rs1337666222 2910 dbSNP
rs1421279436 2915 dbSNP
rs1360990417 2916 dbSNP
rs137882367 2918 dbSNP
rs956417811 2918 dbSNP
rs1432994684 2926 dbSNP
rs575898633 2935 dbSNP
rs948748786 2940 dbSNP
rs1259833632 2941 dbSNP
rs1216684765 2954 dbSNP
rs953795335 2956 dbSNP
rs1280131822 2961 dbSNP
rs1209318835 2968 dbSNP
rs575176978 2969 dbSNP
rs1044793895 2975 dbSNP
rs1347710341 2976 dbSNP
rs1257123995 2982 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000357430.3 | 3UTR | UCAAGUUUUUAAACAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
269 hsa-miR-548ah-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055349 PDCD4 programmed cell death 4 2 2
MIRT078710 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT088880 FOXN2 forkhead box N2 2 10
MIRT099612 ID4 inhibitor of DNA binding 4, HLH protein 2 4
MIRT111805 MPZL1 myelin protein zero like 1 2 2
MIRT166778 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 2
MIRT221310 LMBR1 limb development membrane protein 1 2 2
MIRT269387 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT309062 C4ORF3 chromosome 4 open reading frame 3 2 2
MIRT318550 SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein 2 2
MIRT325436 CKS2 CDC28 protein kinase regulatory subunit 2 2 2
MIRT331326 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT336802 ARF1 ADP ribosylation factor 1 2 4
MIRT350505 MRGBP MRG domain binding protein 2 6
MIRT374401 M6PR mannose-6-phosphate receptor, cation dependent 2 4
MIRT399357 IER2 immediate early response 2 2 2
MIRT401033 MOB1B MOB kinase activator 1B 2 4
MIRT441729 HAUS6 HAUS augmin like complex subunit 6 2 2
MIRT442381 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442407 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT443989 GJD3 gap junction protein delta 3 2 4
MIRT444047 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT444245 CHMP1B charged multivesicular body protein 1B 2 2
MIRT444402 FRMD5 FERM domain containing 5 2 2
MIRT444463 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT444644 HSBP1 heat shock factor binding protein 1 2 2
MIRT444854 EXD2 exonuclease 3'-5' domain containing 2 2 2
MIRT444988 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT445107 ZNF207 zinc finger protein 207 2 2
MIRT445449 HSPA14 heat shock protein family A (Hsp70) member 14 2 4
MIRT445515 CRNKL1 crooked neck pre-mRNA splicing factor 1 2 4
MIRT445590 RCC2 regulator of chromosome condensation 2 2 2
MIRT445679 TNFSF15 TNF superfamily member 15 2 2
MIRT445733 PGK1 phosphoglycerate kinase 1 2 2
MIRT445827 DNAAF3 dynein axonemal assembly factor 3 2 2
MIRT445996 CD1D CD1d molecule 2 2
MIRT446068 RABIF RAB interacting factor 2 2
MIRT446146 ST6GAL2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 2 2
MIRT446302 ACSL3 acyl-CoA synthetase long chain family member 3 2 2
MIRT446426 ABHD2 abhydrolase domain containing 2 2 2
MIRT447263 C3orf30 chromosome 3 open reading frame 30 2 2
MIRT447692 MTPAP mitochondrial poly(A) polymerase 2 2
MIRT447753 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT447883 LMAN1 lectin, mannose binding 1 2 2
MIRT448032 GSR glutathione-disulfide reductase 2 2
MIRT448155 P2RY10 purinergic receptor P2Y10 2 2
MIRT448215 SNAI2 snail family transcriptional repressor 2 2 2
MIRT448414 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT448890 DENND4C DENN domain containing 4C 2 2
MIRT449043 ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 2 2
MIRT449269 PALM2 paralemmin 2 2 2
MIRT449571 GPC5 glypican 5 2 4
MIRT450116 IMP3 IMP3, U3 small nucleolar ribonucleoprotein 2 2
MIRT450149 GABRB3 gamma-aminobutyric acid type A receptor beta3 subunit 2 2
MIRT450606 EXOC2 exocyst complex component 2 2 2
MIRT459247 ADRBK1 G protein-coupled receptor kinase 2 2 2
MIRT464464 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465114 TSC22D2 TSC22 domain family member 2 2 4
MIRT466778 SUZ12 SUZ12 polycomb repressive complex 2 subunit 2 4
MIRT467990 SKIL SKI like proto-oncogene 2 4
MIRT469263 RHOB ras homolog family member B 2 2
MIRT470717 POGK pogo transposable element derived with KRAB domain 2 2
MIRT472380 NEK7 NIMA related kinase 7 2 2
MIRT475022 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT475248 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 2
MIRT475678 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT479405 CDKN1B cyclin dependent kinase inhibitor 1B 2 10
MIRT482621 ABCE1 ATP binding cassette subfamily E member 1 2 2
MIRT490488 FEM1C fem-1 homolog C 2 2
MIRT492176 SOX4 SRY-box 4 2 10
MIRT493559 HSPA5 heat shock protein family A (Hsp70) member 5 2 2
MIRT494647 ARNTL aryl hydrocarbon receptor nuclear translocator like 2 2
MIRT497510 ZNF652 zinc finger protein 652 2 4
MIRT499150 HSPA1B heat shock protein family A (Hsp70) member 1B 2 8
MIRT502081 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT502824 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 6
MIRT503936 FBXL13 F-box and leucine rich repeat protein 13 2 4
MIRT504229 MYO6 myosin VI 2 2
MIRT506016 PURA purine rich element binding protein A 2 2
MIRT506416 NHLRC3 NHL repeat containing 3 2 6
MIRT508022 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT508293 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 4
MIRT508358 HES7 hes family bHLH transcription factor 7 2 6
MIRT510848 RARB retinoic acid receptor beta 2 6
MIRT511509 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT511980 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 4
MIRT512301 AMER1 APC membrane recruitment protein 1 2 6
MIRT515651 MYBPC1 myosin binding protein C, slow type 2 2
MIRT518423 SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 2 2
MIRT519692 ZNF620 zinc finger protein 620 2 2
MIRT521598 PSMA2 proteasome subunit alpha 2 2 4
MIRT527241 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT527279 FBLN2 fibulin 2 2 2
MIRT527377 MGARP mitochondria localized glutamic acid rich protein 2 2
MIRT527448 COL4A3 collagen type IV alpha 3 chain 2 2
MIRT528342 TBC1D22B TBC1 domain family member 22B 2 2
MIRT529098 ZNF100 zinc finger protein 100 2 2
MIRT529661 ZNF81 zinc finger protein 81 2 2
MIRT530057 TRIM72 tripartite motif containing 72 2 2
MIRT530271 MKRN3 makorin ring finger protein 3 2 2
MIRT530873 TRUB1 TruB pseudouridine synthase family member 1 2 2
MIRT531246 FANCC Fanconi anemia complementation group C 2 2
MIRT531408 TMEM18 transmembrane protein 18 2 2
MIRT534421 SEMA4F ssemaphorin 4F 2 2
MIRT534500 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT534765 RASGEF1A RasGEF domain family member 1A 2 2
MIRT534942 PTBP3 polypyrimidine tract binding protein 3 2 2
MIRT536972 HAS3 hyaluronan synthase 3 2 2
MIRT537633 ERI1 exoribonuclease 1 2 2
MIRT537720 ELK3 ELK3, ETS transcription factor 2 2
MIRT538772 CABLES1 Cdk5 and Abl enzyme substrate 1 2 2
MIRT540958 SLC25A43 solute carrier family 25 member 43 2 2
MIRT541274 GPC4 glypican 4 2 4
MIRT543347 ZNF829 zinc finger protein 829 2 2
MIRT543617 MFAP3 microfibril associated protein 3 2 2
MIRT543644 YY2 YY2 transcription factor 2 2
MIRT544227 GTF2B general transcription factor IIB 2 2
MIRT544413 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544939 SNCB synuclein beta 2 2
MIRT545321 SPC25 SPC25, NDC80 kinetochore complex component 2 2
MIRT546088 VEZF1 vascular endothelial zinc finger 1 2 2
MIRT548516 DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 2 2
MIRT548632 DAZAP1 DAZ associated protein 1 2 4
MIRT551028 SPPL3 signal peptide peptidase like 3 2 2
MIRT552058 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 4
MIRT553268 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT553297 TSPAN3 tetraspanin 3 2 2
MIRT553613 TM7SF3 transmembrane 7 superfamily member 3 2 2
MIRT554201 SLC35D1 solute carrier family 35 member D1 2 2
MIRT554795 RGPD4 RANBP2-like and GRIP domain containing 4 2 2
MIRT554838 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT555709 PDZD8 PDZ domain containing 8 2 2
MIRT556063 MTF2 metal response element binding transcription factor 2 2 4
MIRT557999 FAM160B1 family with sequence similarity 160 member B1 2 2
MIRT558674 CNIH cornichon family AMPA receptor auxiliary protein 1 1 1
MIRT558954 CBFB core-binding factor beta subunit 2 2
MIRT559026 C20orf24 chromosome 20 open reading frame 24 2 2
MIRT559103 C18orf25 chromosome 18 open reading frame 25 2 2
MIRT559858 GSKIP GSK3B interacting protein 2 2
MIRT561591 SKI SKI proto-oncogene 2 2
MIRT562262 GRB2 growth factor receptor bound protein 2 2 2
MIRT562413 EIF2S2 eukaryotic translation initiation factor 2 subunit beta 2 2
MIRT562646 ARID1A AT-rich interaction domain 1A 2 4
MIRT564273 DEPDC1B DEP domain containing 1B 2 2
MIRT565301 TMEM64 transmembrane protein 64 2 2
MIRT565392 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT566564 OTUD4 OTU deubiquitinase 4 2 2
MIRT566708 MTMR3 myotubularin related protein 3 2 2
MIRT566784 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT568411 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT571817 PHF19 PHD finger protein 19 2 2
MIRT571989 HOXA9 homeobox A9 2 2
MIRT573750 KHSRP KH-type splicing regulatory protein 2 2
MIRT573993 DDX21 DExD-box helicase 21 2 2
MIRT574488 RPS16 ribosomal protein S16 2 2
MIRT574507 PSAT1 phosphoserine aminotransferase 1 2 2
MIRT574553 NRBF2 nuclear receptor binding factor 2 2 2
MIRT576680 H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 2 2
MIRT608353 ZRANB1 zinc finger RANBP2-type containing 1 2 2
MIRT608634 ATP9A ATPase phospholipid transporting 9A (putative) 2 6
MIRT609179 ZNF581 zinc finger protein 581 2 2
MIRT609792 NHSL1 NHS like 1 2 2
MIRT610675 SYT2 synaptotagmin 2 2 4
MIRT610880 NUDCD3 NudC domain containing 3 2 2
MIRT611024 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT611670 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT612067 PDGFRA platelet derived growth factor receptor alpha 2 2
MIRT612486 SLC25A11 solute carrier family 25 member 11 2 2
MIRT612648 PSPC1 paraspeckle component 1 2 2
MIRT612688 PLXNA4 plexin A4 2 2
MIRT613108 ESR1 estrogen receptor 1 2 2
MIRT613549 AMPD3 adenosine monophosphate deaminase 3 2 2
MIRT614532 SUB1 SUB1 homolog, transcriptional regulator 2 2
MIRT614569 GMPR guanosine monophosphate reductase 2 2
MIRT614661 ZNF608 zinc finger protein 608 2 2
MIRT614675 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT615313 CCDC158 coiled-coil domain containing 158 2 2
MIRT616112 GGCX gamma-glutamyl carboxylase 2 2
MIRT617750 MICA MHC class I polypeptide-related sequence A 2 2
MIRT618797 ZIC2 Zic family member 2 2 2
MIRT619227 FUNDC2 FUN14 domain containing 2 2 2
MIRT620281 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT620491 XKR6 XK related 6 2 2
MIRT622613 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT622967 OXSR1 oxidative stress responsive 1 2 2
MIRT623482 KDM5A lysine demethylase 5A 2 2
MIRT623626 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT623699 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT624815 ADAM17 ADAM metallopeptidase domain 17 2 2
MIRT625188 GRIK4 glutamate ionotropic receptor kainate type subunit 4 2 2
MIRT625367 CDKL2 cyclin dependent kinase like 2 2 2
MIRT625919 GBP6 guanylate binding protein family member 6 2 2
MIRT625962 RNF2 ring finger protein 2 2 2
MIRT626264 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT626425 ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 2 2
MIRT626851 FDX1 ferredoxin 1 2 2
MIRT628014 MEF2C myocyte enhancer factor 2C 2 2
MIRT628047 LIMD1 LIM domains containing 1 2 2
MIRT628360 CCDC117 coiled-coil domain containing 117 2 2
MIRT628461 ANAPC16 anaphase promoting complex subunit 16 2 2
MIRT630929 UNC93A unc-93 homolog A 2 2
MIRT635226 CD59 CD59 molecule (CD59 blood group) 2 2
MIRT635478 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT638149 TTC26 tetratricopeptide repeat domain 26 2 2
MIRT638295 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT638431 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT640275 TCF24 transcription factor 24 2 2
MIRT641183 STX4 syntaxin 4 2 2
MIRT642295 ZNF99 zinc finger protein 99 2 2
MIRT643270 ZNF566 zinc finger protein 566 2 2
MIRT643581 CTNNA3 catenin alpha 3 2 2
MIRT644173 GIN1 gypsy retrotransposon integrase 1 2 2
MIRT644433 VDR vitamin D receptor 2 2
MIRT644614 C17orf77 chromosome 17 open reading frame 77 2 2
MIRT644855 PGM2 phosphoglucomutase 2 2 2
MIRT645449 ATF6B activating transcription factor 6 beta 2 2
MIRT647203 ZNF583 zinc finger protein 583 2 2
MIRT649421 CDC14B cell division cycle 14B 2 2
MIRT650499 UFM1 ubiquitin fold modifier 1 2 2
MIRT650695 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT651209 ZNF280B zinc finger protein 280B 2 2
MIRT653782 SIX4 SIX homeobox 4 2 2
MIRT655057 PKN2 protein kinase N2 2 2
MIRT655707 NUDT21 nudix hydrolase 21 2 2
MIRT656943 KIAA1456 KIAA1456 2 2
MIRT658275 FAXC failed axon connections homolog 2 2
MIRT658519 ETV3 ETS variant 3 2 2
MIRT658655 ENAH ENAH, actin regulator 2 2
MIRT658688 EMP2 epithelial membrane protein 2 2 2
MIRT659241 CXCR5 C-X-C motif chemokine receptor 5 2 2
MIRT659289 CTDSPL2 CTD small phosphatase like 2 2 2
MIRT660101 BTBD3 BTB domain containing 3 2 2
MIRT660463 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT663648 INTU inturned planar cell polarity protein 2 2
MIRT664065 KIAA1551 KIAA1551 2 2
MIRT666140 SPATS2L spermatogenesis associated serine rich 2 like 2 2
MIRT675549 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT684998 RPL10A ribosomal protein L10a 2 2
MIRT685687 TRIM45 tripartite motif containing 45 2 2
MIRT687485 NHLRC2 NHL repeat containing 2 2 2
MIRT687799 KCNJ15 potassium voltage-gated channel subfamily J member 15 2 2
MIRT687911 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT687962 HHIP hedgehog interacting protein 2 2
MIRT689214 ZNF574 zinc finger protein 574 2 2
MIRT689481 SCIMP SLP adaptor and CSK interacting membrane protein 2 2
MIRT690495 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT692284 XRN2 5'-3' exoribonuclease 2 2 2
MIRT693054 KIAA1324 KIAA1324 2 2
MIRT697437 ZFHX3 zinc finger homeobox 3 2 2
MIRT698469 TJP1 tight junction protein 1 2 2
MIRT699027 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699779 SEMA4D semaphorin 4D 2 2
MIRT701863 MRO maestro 2 2
MIRT702152 MAP3K1 mitogen-activated protein kinase kinase kinase 1 2 2
MIRT702235 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT703744 FAM126B family with sequence similarity 126 member B 2 2
MIRT704271 DGS2 DiGeorge syndrome/velocardiofacial syndrome complex 2 2 2
MIRT707745 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT709855 SNX12 sorting nexin 12 2 2
MIRT712741 LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 2 2
MIRT712948 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT713142 PKIA cAMP-dependent protein kinase inhibitor alpha 2 2
MIRT715529 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT718275 ZNF749 zinc finger protein 749 2 2
MIRT720146 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT722713 ZNF460 zinc finger protein 460 2 2
MIRT723253 TMLHE trimethyllysine hydroxylase, epsilon 2 2
MIRT724240 DGKE diacylglycerol kinase epsilon 2 2
MIRT725076 WTIP WT1 interacting protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548ah-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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