miRTarBase - #MIRT446695


—
pre-miRNA Information
pre-miRNA hsa-mir-4708   
Genomic Coordinates chr14: 65335117 - 65335183
Description Homo sapiens miR-4708 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4708-5p
Sequence 9| AGAGAUGCCGCCUUGCUCCUU |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1017378847 9 dbSNP
rs750825813 10 dbSNP
rs1297395738 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PAPPA   
Synonyms ASBABP2, DIPLA1, IGFBP-4ase, PAPA, PAPP-A, PAPPA1
Description pappalysin 1
Transcript NM_002581   
Expression
Putative miRNA Targets on PAPPA
3'UTR of PAPPA
(miRNA target sites are highlighted)		 
>PAPPA|NM_002581|3'UTR
   1 GGAAGGACAAGAAGTTGTCAAAGAATTCCCAACGCCAGGACCCACATCCCTTTGGTATTGATTTCACAGTCAGCTGCTCA
  81 ACGGAATGGCCTCTCCACACCAGGGATCCTTAGCACCCAACCGGTCTGCCTTTAATTTTACCCAGGAAGGACTCACATTG
 161 GGGCGAATGAACCAAGTTTCGCCATGCTGGATGATGAAATGGATTCCCATCCCAAAGTCTGAGATGGATTGCATATACAG
 241 TGTGCAGTCCCAGAGCCTCCTAAAATTCTAGCCATTTGTCACACAACCACAGCAAGAAACGTGTTCTATATCTAGAGTGT
 321 GCCCATCTGTGTTTAGTACACATGCATGCATACACACCCATACAAACATCTGTGTGAGGGCAGTTCTGGAGATGAGCAGA
 401 GAGAGACCGGAATAAACTCAATCTTTTCTTTCCCAAGCTCCTAGCCAACACTATCCTTGGGAGAAAGAAATTTGCAGAAA
 481 CTGCTAAGACCAAGTGTGGAGATGTCAAGCTAGTTCACACTCTGAGGCTCAGAATATGTAGGACATGCACAATTGTGCAG
 561 TCCTTTGGGATTGGAAGTGAAACAGTCTGTGATCCCCTACCTTCTAGGGAACTAGGACCTAGGAAGAGGTAAAGATTATC
 641 AGGTATGCAAAGCGCCCCAATTCTTCTGCTGCCATGGGGGATTTTACCCCAACTCCAGGGTTCGAGGCCAATCTGAGAAT
 721 GGCTTAGGATTGCAATGTCAAGGTATTATATCAGCCCCTTGCTTGAGGCTTGAGGTCATAATATCCCTCTAGGACTTACC
 801 TGTTCCCCCAGATCTTGCCTTGGGACCACATTTGCTGCTACTTTTCCTGCTGCTCTATCCTATACATTGAATAATCCAAG
 881 ATGGTAGAACTAGGTTAGGAAAAATTCCACACAACCAAACAGTCTGCCTTAAAAGTGACCCACATTTTTCCATAGCTCCT
 961 CACTTTTTAGCCCTTCTGCAAGAGAAAAACCCTCATGGGTCCACATGGTGAGAAGTTAAGTTTCCTGTAAGTGGGCCTCT
1041 CACCCTGGAAAGGAGTTGAGGGACATCAGATGCTGGAACCCTCACTGAAAGTCCAGAATGTCTAAGCCAGTGTTAGATTT
1121 TGTAAACAAGTGGAACAGTGTTAAATTTCTATGATGTTGGAGCCATCCAGAGACTACTGGAATTGTCGAGACTTTTGGAT
1201 TATTATCCTTATCCTTATCCTAATCTTCCTAGCCCTTCAGGCTAGAGTAGGCTTTGATCCTGAGAACCTTGCTGTTGCTC
1281 TGAGGAGATATAATTCTGGGAGAAAGAATCTTTTATAAGAACAGTACAGATTGTTCTCAAGAGGGCCATCAGAAGGAAGC
1361 CAAAGAGTTCACAGCCTCAGCACCAACAACTCAACATGGTCATCATGTTTTCTATATGGTTTTTCCAGCTAGCAGTACTC
1441 CCTTCCATACCTGTGACTGGGCAGTGCTTTTCTCTCTCCCATGTCTAGCCTCCAAAAGTTAAGTGAAAATTAGTCAACTG
1521 CACGTGGAAGCCCCCACCACTTTGGGGATCTCTTTATTTCTTTTCAGCCAGGGACCTGTCCACTCCCTTTGAATTAATAT
1601 GGGAAGAAATTAATACAGGATGAACTGGAGAGAAGGGTTGAGTGTGGCATACTTTCTGAAACCTGGAGCTGGGAATTGCG
1681 GAGAAGGGAAGGTCTAGACTAGTTACATCACATAGGGATTACTGTAAATCAAGTCATCTCAAGTCTAGTGAAGACAGCCA
1761 ACAGAAACAAAACCTAGCATAGGGATAGAAAATACCATGCACGTGTGCAGCCCCACCTAATTCCTGCATCCAAGGCAGGT
1841 GTTGTTAATCTATCATAGCACTTAAAAAAAAAAAAAAAAAGAGACCAAAAATAACTTTAGGAACCACCATATTATATCAC
1921 TCCCAATAGCACTGACCTGGTGATCAAAAACACTTGAGAAGACATCTATTGGCCATCTCTGGCCAATTACACTAAGAAAC
2001 ATATCAAGGTGCTTTTGGCACAGGTGCCCACAAATACGGATGCAGTGCTGAGATAGTTTATGAGACTTGTACCATTTCAC
2081 AAACTCTGAAATTGGGTTCCATATTGGCAAGGCTGCCACAGTTGTTAAGAATAATCCTCTATGTTTCTTCCTCACAAAAC
2161 CATATCTCATTTATATCCAGACCATTACTTCACTATAATTACAAGGACAAATTATTAGCAAGAAATAAGAATAGTATTAG
2241 AAGAATTGATCCTATTTTGAACCCCTCTCCAGTATCTTCACACTCTTGTCAACTCTCCAGGCCTCTCTCTTGCCCTGAGT
2321 TATCAGCCTGTGTGGTGTTAACTACCTTAGAAGGTACAAGCTAAGAAATGTAACAGTATCAACCCTCCCAGTTGCTTAAT
2401 TATACCCATAGGTAATACAAAAAGCTCTGAAGACCCAAAGATGACATTACTAATGATGTGATTTCAGGAGCCACAGAAGA
2481 ACCTTACCAGCTTCCCTCAAATCAGTCCTTATCCTCTTTCTATCTTCACTCCCATCATCATCTATTTTCACACTATCCAG
2561 CTAAGCAAAGATTCCTGGAGGCTGACTTGTATCTTCAGACTCACAGAGTGAATTCAGCTCTTCTGAATCAAGACCCACCC
2641 AGTCTCTTTCATTCAGACCTGTTGCTAACAAATTTATATTTGCCAAGGATATTAGGCAAAAGAGGCTACTTGATTGGTGG
2721 CCAACCTCGTGCCCACATGGAAGGTATCTTTAATAGGGTCTTTTCAAACCTTAGTGGAGGAGGGTCAGCTCAATTTGGGC
2801 AATGCATTTGTTCCCAGTTTCATTTTCTTCCTGGGAATTAACTCGTCATTTCATTCCTTCAGTCATCTTCTGTGTAGGTG
2881 ACCGGAGCACTGAGAGGCAGCTCTGATGCACTATTGTGTGTCAGCAGCTCAAAGGCCCTAAAACACTGAAGGTTCTGCAT
2961 CTGAAGTATTAGATTGTTAGCAGCAAAATATGAAAGATGAGGTGGACAGTCCTCTAAGCCCTATTTAGGGAAGCTTTTCC
3041 AAGCCACAATCTTAACTACCTACCCAAAGGATTTGCATTACCCCCAGATTCTGTGCCAACAACCTTTTAAGGAAATACAG
3121 TCCTTGGGAAATGAGTTTTGATGGTGAATTGGGGTGTTAAGGAAGGGAAAGATTGTCATAGATGGTAGGGCTTTGAAAAT
3201 GCAGGGTATCAGCTGCCACTCCTGGCTTCAACACATTGAGTCACTGCCTAGACGGTTCTCTTGGTCTTATTCCCATCCTG
3281 GCCAATGCTTAAATACTATTTGTTGAAAATAATTCTTTGAGACAGATTTCAGCTACCTCCCTTCCAGGTTCGATTTAACT
3361 TGGTTGTAATTGTCAATTTGTTGTTATAGGTCTTACCTGTGTGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAGAAAGG
3441 AAATTATAAGGTCAAGTTAACAGTTTTGAGGTTTTGTGTTTTTTTCTGGAACTACTTCAAGTGAGAAAATAAAAAAAAAT
3521 GGTGACAAAGCTGTACAGATAGAGATAATAGAAGACAAAGAGATTAAAAGGAAATAAAAATGCATGATTAAAAACTAAGA
3601 ATAAAAAACCTATTTTTATGTTTCCTAAAGGAAATTGTTTATTCTACAGCCTCAGTAGGTAGACACAAACATAAAGATTT
3681 CCCTAGAAGACATAGAGTGGGATTTGATAACACTGTCTGTTATTTTCTGTACATTGTGGTAGGTCCAGGAAATATGACAT
3761 TTTCCCCCTTGATGTGTTATTGTTGTTGTTGGGTGGGGTGGGCATTTTGTTTATTTGTTTGGTGGCAATCAGTGGTAGTA
3841 GGGAGTGGGAGGGCTTATATTGGTTTTTCCAGCTATTAAGGGGACATATTGTGTCGTTGTGCTTTTCACGTTATAAAATG
3921 TTTATATTTACCAGTACAGCACTGGGCTTTATAAAGACTGCACTCAGAACCACACTGCACAGTCCAGTTTTTTAAAAAGC
4001 TGCTACATGACAGACAGGTAATCCCACTGAGTGAGTTTTGAGAAACAAATCAAACGAAGTAAACAAGAAACATAAAAACC
4081 AAATAGCAAATGAATAAAAGCCTGTTCTTGTAACTTATTCAACTTTTGCCAAATTCCTACCAATCACTTGCTTTTTAAAA
4161 GAAATGTATAATAGCCAAAAGAGAAATTATGTCCCTGTTGTACAGAAGTTAGAATTTTTGACTCCAGGCAGCAGTTTGCT
4241 CAGTGATCTTGAACAAGTTATCCAATTGCCTCTACATTTGCATCAGTTTCTCTAGCTGCAAAATGGGGATAATACTATAT
4321 ACCTACCTCACAGTGGGAGGGCAGGAGATTTTGAGGCCCTGAGGTTTTAGGTGGGCTGTGAGGGCCAACGCTTGACACAA
4401 AGTCCATGGGTTATTATTCAAGAATGCACAGGCCCATCGGCCTTTTAGAAAGACAAGACAGGGAGTGCTTGTTTGATATT
4481 TCAAGGAATAAAGCCGGAGCTCCTGAATTGTAGTCCACCTTAAAAGAGAGACCTGTATTGGAGAATATTTTATTTTTTTG
4561 GCAAATTTGATCTTACCCTTTACCAGTTCTATAATTTGGTTAAAAGCTGATTATGTCCTACAATGTCAAAGTCAGCTAAC
4641 TGTCGTCTACTTAAGACTTCTGGTCATTTCCAACTTATAGAGGAAGGGAGTCTCTAAAATCTCTTCTTCAGAAGGCACCT
4721 CACTTCTCAGACTTAAAATTCCACATCAAGTGTTCCATTAAAAGAAGATAAGGCATTCTGAGTGCAAACAAATGGGGGCT
4801 TCTTAAACTACACACCAGCAGTCAGTGAGGAAAACTTTGAACAATTATTGAGTTGCTTTCTTGGGTCTCTATAATCAATA
4881 ACCTGTCTGCAGATATCTATCTATATAAAGATATTATATATAAATATAAATTTACATATATATGCACATGTATATATAGT
4961 TGTACATATATGTGTGTATATATATACTTAAATGTAATATTTACAAAATAAAACTGTGATCTCGTCTAGAGAAAATGTAT
5041 TCATATTACAAACTGCTCTTCCATATTTATGTACCATATTATACCTTTTTATTATTGTTATAATTATTATGGGTATTTCT
5121 AATTAATATGATGTTGAAACCTGTTTGGCACCTTCTGGAAGCTACCAAAAAAATGACACTCCATTGAAGTGCTTAAAAGC
5201 TGTTCTCATAAGAATTCTTCTGGCCTATTGTAAAAAAGAAAAAAAAAAAGAAAAAGAAGAAAGACACAAAGAAAATAATC
5281 TAAACACCAAAAACTAAACACAATTCCAATCCTTTTTCTGTACCTCACGCGCATAAATTTGCTGCTCCTATTTTTTTTTC
5361 TGTTTATGTGTTTTTATGGATCTAAGTTAAATCTTTTGGCAATATATAAAAATGTAAATAGTAAACTTTATTTATTAAGA
5441 ATGTCATCTTTTTTAATTTATATTTACACAATTGTTCATCTAATTTATTTTTTCTATACAGTTTTAAATACTCAGACATA
5521 TTTTGCTGTTCATGATATTTTTATCCTGTTCTCATGGATTTGTTTTCCCATACTGTTTTCTCTGATCTCAATTACAGGTT
5601 GGATCTCACAAATAATAATGTCAGAGACAGAAATATTTTGCCACTGTTGATTACTATACTTTAAAGTTCTATATTATGAA
5681 AATATATAATAGCTTGTACGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuCCUCGU--UCCGCCGUAGAGa 5'
            ||||||  : | |||| ||| 
Target 5' ccGGAGCACTGAGAGGCAGCTCt 3'
 2882 - 2904 133.00 -19.50
2 
miRNA  3' uuccucgUUCC--GCCGUAGAga 5'
                 ||||  | ||||||  
Target 5' aacactgAAGGTTCTGCATCTga 3'
 2942 - 2964 132.00 -9.10
3 
miRNA  3' uucCUCGUUCCG-CCGUAGAGa 5'
             |:|:::||: |||||:|: 
Target 5' gttGGGTGGGGTGGGCATTTTg 3'
 3788 - 3809 130.00 -18.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30521935 2 COSMIC
COSN8519882 7 COSMIC
COSN31586377 24 COSMIC
COSN30451604 29 COSMIC
COSN31611675 32 COSMIC
COSN30453310 40 COSMIC
COSN30480416 49 COSMIC
COSN30615192 72 COSMIC
COSN30488679 84 COSMIC
COSN26440536 97 COSMIC
COSN30485849 97 COSMIC
COSN28732047 104 COSMIC
COSN30486886 106 COSMIC
COSN28726491 143 COSMIC
COSN30509535 161 COSMIC
COSN30115140 166 COSMIC
COSN17310901 182 COSMIC
COSN31532604 182 COSMIC
COSN31610272 185 COSMIC
COSN2307406 249 COSMIC
COSN26575879 304 COSMIC
COSN32062657 400 COSMIC
COSN5696193 423 COSMIC
COSN26564022 438 COSMIC
COSN29992391 441 COSMIC
COSN17182492 495 COSMIC
COSN15171848 509 COSMIC
COSN2465274 557 COSMIC
COSN30173496 579 COSMIC
COSN31541158 610 COSMIC
COSN16389732 654 COSMIC
COSN15661420 704 COSMIC
COSN31517352 718 COSMIC
COSN31571699 758 COSMIC
COSN31481099 790 COSMIC
COSN31549143 820 COSMIC
COSN30542542 847 COSMIC
COSN6377317 863 COSMIC
COSN28654717 972 COSMIC
COSN28648865 1000 COSMIC
COSN21529958 1081 COSMIC
COSN26563284 1101 COSMIC
COSN31596215 1117 COSMIC
COSN1372480 1179 COSMIC
COSN30215681 1254 COSMIC
COSN19657770 1256 COSMIC
COSN31529529 1265 COSMIC
COSN31547902 1266 COSMIC
COSN25853355 1393 COSMIC
COSN17375667 1537 COSMIC
COSM4163276 1864 COSMIC
COSM9844725 1879 COSMIC
COSM9844671 1880 COSMIC
COSM5713177 1881 COSMIC
COSM9813260 1881 COSMIC
COSM4163277 1882 COSMIC
COSM6350860 1973 COSMIC
COSM6350861 2039 COSMIC
COSM4413734 2071 COSMIC
COSM9375823 2097 COSMIC
COSM1624476 2130 COSMIC
COSM9574672 2130 COSMIC
COSN27640694 2291 COSMIC
COSN21509145 2371 COSMIC
COSN30695419 2429 COSMIC
COSN28759189 2594 COSMIC
COSN28822783 2603 COSMIC
COSN22043573 2715 COSMIC
COSN30594111 2730 COSMIC
COSN22105657 2814 COSMIC
COSN30628146 2876 COSMIC
COSN31540238 2895 COSMIC
COSN15111577 2905 COSMIC
COSN4943852 2923 COSMIC
COSN15666494 2978 COSMIC
COSN31964069 2984 COSMIC
COSN31592976 3008 COSMIC
COSN31486199 3025 COSMIC
COSN15761708 3080 COSMIC
COSN2307409 3084 COSMIC
COSN31973407 3088 COSMIC
COSN2307411 3145 COSMIC
COSN9697076 3176 COSMIC
COSN30620170 3302 COSMIC
COSN31608935 3317 COSMIC
COSN30175483 3340 COSMIC
COSN26583295 3381 COSMIC
COSN19042846 3398 COSMIC
COSN31565042 3412 COSMIC
COSN30759787 3432 COSMIC
COSN30746969 3486 COSMIC
COSN30555977 3520 COSMIC
COSN15661614 3543 COSMIC
COSN31963098 3897 COSMIC
COSN30744408 3940 COSMIC
COSN20703669 4138 COSMIC
COSN31515122 4184 COSMIC
COSN31479996 4293 COSMIC
COSN8119700 4315 COSMIC
COSN31491291 4323 COSMIC
COSN31514852 4377 COSMIC
COSN31519958 4391 COSMIC
COSN31535347 4403 COSMIC
COSN31549560 4423 COSMIC
COSN31588270 4432 COSMIC
COSN31549578 4529 COSMIC
COSN14814837 4600 COSMIC
COSN31608941 4748 COSMIC
COSN31486033 4751 COSMIC
COSN31564630 5174 COSMIC
COSN31608314 5197 COSMIC
COSN31527709 5213 COSMIC
COSN20106531 5250 COSMIC
COSN26582722 5251 COSMIC
COSN16703829 5288 COSMIC
COSN31571216 5337 COSMIC
COSN29531200 5360 COSMIC
COSN31584161 5427 COSMIC
COSN31561670 5494 COSMIC
COSN24303063 5594 COSMIC
COSN6377319 5621 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs755939255 8 dbSNP
rs373430540 9 dbSNP
rs772241049 11 dbSNP
rs780019936 14 dbSNP
rs1802818 15 dbSNP
rs553483979 19 dbSNP
rs926884351 21 dbSNP
rs1234193289 24 dbSNP
rs1283756822 27 dbSNP
rs372582569 29 dbSNP
rs776777054 30 dbSNP
rs1463079031 32 dbSNP
rs202071577 34 dbSNP
rs769575002 35 dbSNP
rs1187134404 36 dbSNP
rs545493827 37 dbSNP
rs1476034120 40 dbSNP
rs766295578 42 dbSNP
rs751065857 47 dbSNP
rs370396088 49 dbSNP
rs1337779035 53 dbSNP
rs780999786 54 dbSNP
rs1350300087 55 dbSNP
rs952531129 65 dbSNP
rs1358873862 68 dbSNP
rs1312973206 77 dbSNP
rs1454608584 78 dbSNP
rs1014449635 81 dbSNP
rs983926081 83 dbSNP
rs1390674103 84 dbSNP
rs562536913 88 dbSNP
rs1169337194 90 dbSNP
rs1429967511 122 dbSNP
rs1313813387 123 dbSNP
rs770294210 124 dbSNP
rs961058903 131 dbSNP
rs1369551837 141 dbSNP
rs2296070 143 dbSNP
rs1016571987 157 dbSNP
rs544800229 159 dbSNP
rs561501340 165 dbSNP
rs530408284 166 dbSNP
rs547318603 169 dbSNP
rs915080317 174 dbSNP
rs946785631 176 dbSNP
rs1458425434 178 dbSNP
rs1042508485 181 dbSNP
rs766562445 182 dbSNP
rs1471755595 183 dbSNP
rs1183553015 186 dbSNP
rs1309659987 194 dbSNP
rs939356270 198 dbSNP
rs988354176 201 dbSNP
rs747919383 212 dbSNP
rs1426076569 225 dbSNP
rs968501927 226 dbSNP
rs1409164942 229 dbSNP
rs1390806172 230 dbSNP
rs1168027695 234 dbSNP
rs1469023240 239 dbSNP
rs895366627 245 dbSNP
rs568663210 248 dbSNP
rs1480280410 250 dbSNP
rs1267122614 257 dbSNP
rs1012508555 275 dbSNP
rs926622521 276 dbSNP
rs1452304813 282 dbSNP
rs1465878663 289 dbSNP
rs1028235741 292 dbSNP
rs938299287 300 dbSNP
rs774672278 301 dbSNP
rs1056628220 302 dbSNP
rs887986794 306 dbSNP
rs918102887 310 dbSNP
rs181773218 312 dbSNP
rs1048327720 320 dbSNP
rs1281043452 328 dbSNP
rs1438136213 337 dbSNP
rs1350000367 348 dbSNP
rs1317059095 351 dbSNP
rs764447534 359 dbSNP
rs772711003 362 dbSNP
rs886866559 370 dbSNP
rs1469663187 371 dbSNP
rs186476133 374 dbSNP
rs1361627797 375 dbSNP
rs1213165117 392 dbSNP
rs10983134 396 dbSNP
rs561877215 401 dbSNP
rs1318829325 406 dbSNP
rs1203326181 409 dbSNP
rs191505970 410 dbSNP
rs1444232356 412 dbSNP
rs1209260200 422 dbSNP
rs1029290276 437 dbSNP
rs1260985042 445 dbSNP
rs1189455599 454 dbSNP
rs45519832 455 dbSNP
rs1475079071 456 dbSNP
rs1269165518 461 dbSNP
rs754773649 471 dbSNP
rs1029600844 473 dbSNP
rs547969474 480 dbSNP
rs567958038 482 dbSNP
rs767344003 492 dbSNP
rs1009409222 496 dbSNP
rs1321864755 502 dbSNP
rs1191231977 507 dbSNP
rs1452508700 509 dbSNP
rs1021165999 512 dbSNP
rs776779321 516 dbSNP
rs149176682 521 dbSNP
rs1178724615 524 dbSNP
rs985431518 529 dbSNP
rs1419082867 540 dbSNP
rs968198378 541 dbSNP
rs915049509 544 dbSNP
rs967936047 545 dbSNP
rs553990550 546 dbSNP
rs530801094 547 dbSNP
rs1248696238 548 dbSNP
rs539392335 549 dbSNP
rs200854098 550 dbSNP
rs533758116 551 dbSNP
rs1415694421 553 dbSNP
rs756093394 554 dbSNP
rs1211989301 559 dbSNP
rs924024698 563 dbSNP
rs1312486097 572 dbSNP
rs959347301 578 dbSNP
rs1334309831 580 dbSNP
rs1343731806 584 dbSNP
rs1297733629 590 dbSNP
rs879754783 613 dbSNP
rs1451218535 614 dbSNP
rs918183814 632 dbSNP
rs369591722 644 dbSNP
rs531958628 654 dbSNP
rs143232287 655 dbSNP
rs1280462095 657 dbSNP
rs1341543510 660 dbSNP
rs909365310 669 dbSNP
rs941119841 675 dbSNP
rs1038109646 677 dbSNP
rs1442796652 679 dbSNP
rs865994361 680 dbSNP
rs1411541754 681 dbSNP
rs899562493 682 dbSNP
rs1183520676 687 dbSNP
rs932316346 694 dbSNP
rs1347148842 695 dbSNP
rs1051166280 696 dbSNP
rs550358806 699 dbSNP
rs1483845204 700 dbSNP
rs1009894570 704 dbSNP
rs541987071 705 dbSNP
rs1356641024 707 dbSNP
rs181132340 709 dbSNP
rs148307390 739 dbSNP
rs1488495985 744 dbSNP
rs756048963 747 dbSNP
rs887926934 749 dbSNP
rs1033743440 758 dbSNP
rs1198168473 760 dbSNP
rs959415472 768 dbSNP
rs1005031498 770 dbSNP
rs1302709698 771 dbSNP
rs865978468 788 dbSNP
rs992123219 790 dbSNP
rs1025393912 800 dbSNP
rs540480236 802 dbSNP
rs578191984 805 dbSNP
rs951031940 814 dbSNP
rs1166880486 818 dbSNP
rs1424360080 822 dbSNP
rs141427617 828 dbSNP
rs984097510 832 dbSNP
rs1179766001 845 dbSNP
rs1473414047 850 dbSNP
rs909408517 852 dbSNP
rs1221266292 854 dbSNP
rs145525416 857 dbSNP
rs1361499918 860 dbSNP
rs1266661043 866 dbSNP
rs1404737771 867 dbSNP
rs1235412763 868 dbSNP
rs752988036 870 dbSNP
rs1316863684 882 dbSNP
rs1305415048 883 dbSNP
rs1322056987 886 dbSNP
rs1333048660 891 dbSNP
rs545776536 904 dbSNP
rs974876254 908 dbSNP
rs1279012639 916 dbSNP
rs562580862 917 dbSNP
rs1237781179 921 dbSNP
rs977922536 929 dbSNP
rs1288093285 936 dbSNP
rs531686712 944 dbSNP
rs1458675304 945 dbSNP
rs923777155 945 dbSNP
rs548229247 950 dbSNP
rs1198285022 953 dbSNP
rs1431122309 954 dbSNP
rs960779866 956 dbSNP
rs557593446 957 dbSNP
rs1452952679 958 dbSNP
rs1485221046 979 dbSNP
rs1050819775 980 dbSNP
rs890778138 983 dbSNP
rs1231775900 984 dbSNP
rs945340732 985 dbSNP
rs568223095 990 dbSNP
rs138138762 1000 dbSNP
rs948105270 1005 dbSNP
rs903756649 1007 dbSNP
rs1000663344 1008 dbSNP
rs1302162815 1047 dbSNP
rs1054845561 1054 dbSNP
rs909439577 1061 dbSNP
rs3810937 1072 dbSNP
rs778319874 1076 dbSNP
rs538963435 1086 dbSNP
rs1381459457 1088 dbSNP
rs1389232295 1089 dbSNP
rs1175464435 1104 dbSNP
rs1424659850 1108 dbSNP
rs1036491751 1110 dbSNP
rs1161798663 1111 dbSNP
rs570705920 1118 dbSNP
rs1387520230 1123 dbSNP
rs1191095992 1127 dbSNP
rs539388552 1130 dbSNP
rs950760920 1137 dbSNP
rs1004864333 1138 dbSNP
rs1449068795 1139 dbSNP
rs775934327 1144 dbSNP
rs747267701 1152 dbSNP
rs889431438 1153 dbSNP
rs1006533455 1156 dbSNP
rs1340187639 1162 dbSNP
rs1022391916 1169 dbSNP
rs1229165304 1173 dbSNP
rs1365854536 1176 dbSNP
rs963587559 1178 dbSNP
rs1335924566 1186 dbSNP
rs974908635 1188 dbSNP
rs556186284 1189 dbSNP
rs1404065002 1190 dbSNP
rs1209992651 1192 dbSNP
rs1271871929 1203 dbSNP
rs1461144796 1203 dbSNP
rs999889981 1210 dbSNP
rs1449472139 1211 dbSNP
rs1179968817 1212 dbSNP
rs1186034795 1229 dbSNP
rs953811335 1232 dbSNP
rs1444545454 1239 dbSNP
rs1238298486 1244 dbSNP
rs1257270184 1246 dbSNP
rs1195555876 1247 dbSNP
rs1444543265 1249 dbSNP
rs986942949 1250 dbSNP
rs1030831417 1252 dbSNP
rs6478235 1256 dbSNP
rs992225978 1257 dbSNP
rs1283582762 1267 dbSNP
rs777069956 1270 dbSNP
rs1042027213 1279 dbSNP
rs1342084849 1292 dbSNP
rs969891368 1293 dbSNP
rs984777144 1307 dbSNP
rs762502228 1316 dbSNP
rs909209955 1320 dbSNP
rs940948533 1325 dbSNP
rs1309473492 1328 dbSNP
rs1458740899 1330 dbSNP
rs1429904249 1331 dbSNP
rs1364386265 1332 dbSNP
rs972320947 1333 dbSNP
rs1474079148 1351 dbSNP
rs925204464 1363 dbSNP
rs923427381 1368 dbSNP
rs1167754915 1376 dbSNP
rs1471775409 1395 dbSNP
rs1254324971 1398 dbSNP
rs1206119797 1400 dbSNP
rs1490220789 1402 dbSNP
rs185096218 1405 dbSNP
rs1211672613 1407 dbSNP
rs1054917630 1415 dbSNP
rs894968086 1417 dbSNP
rs1050570989 1418 dbSNP
rs1013693396 1420 dbSNP
rs1046934737 1433 dbSNP
rs886494793 1435 dbSNP
rs1005302509 1445 dbSNP
rs1348384049 1448 dbSNP
rs142514098 1458 dbSNP
rs1395341878 1460 dbSNP
rs572067099 1483 dbSNP
rs1410025017 1496 dbSNP
rs1310488681 1499 dbSNP
rs1330112608 1503 dbSNP
rs1321041482 1505 dbSNP
rs1341984092 1507 dbSNP
rs963665119 1513 dbSNP
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rs1257263228 1518 dbSNP
rs774059452 1519 dbSNP
rs146014088 1522 dbSNP
rs372914858 1524 dbSNP
rs1183213077 1525 dbSNP
rs1245152044 1531 dbSNP
rs1480250040 1531 dbSNP
rs2565 1532 dbSNP
rs577456073 1534 dbSNP
rs1030947519 1550 dbSNP
rs550919794 1551 dbSNP
rs1268045433 1552 dbSNP
rs1208009480 1563 dbSNP
rs896424526 1574 dbSNP
rs978200134 1580 dbSNP
rs562843777 1587 dbSNP
rs1269823073 1588 dbSNP
rs764661032 1598 dbSNP
rs924941590 1598 dbSNP
rs1343866580 1601 dbSNP
rs531556123 1604 dbSNP
rs1199179457 1612 dbSNP
rs1013398390 1619 dbSNP
rs1331163286 1628 dbSNP
rs1320529077 1631 dbSNP
rs1023483424 1644 dbSNP
rs767021752 1646 dbSNP
rs1160399214 1649 dbSNP
rs1414197241 1657 dbSNP
rs969462404 1665 dbSNP
rs1174524054 1671 dbSNP
rs752542996 1673 dbSNP
rs936619213 1677 dbSNP
rs1054947086 1680 dbSNP
rs770267769 1681 dbSNP
rs1463509640 1683 dbSNP
rs1249754637 1691 dbSNP
rs1209121023 1698 dbSNP
rs1441623598 1698 dbSNP
rs985317629 1724 dbSNP
rs1220572700 1730 dbSNP
rs1171693187 1737 dbSNP
rs1405355797 1741 dbSNP
rs916472301 1754 dbSNP
rs1225482601 1756 dbSNP
rs962381786 1763 dbSNP
rs9535 1766 dbSNP
rs923501183 1771 dbSNP
rs1404262652 1775 dbSNP
rs933586688 1781 dbSNP
rs986228641 1784 dbSNP
rs764149937 1785 dbSNP
rs1277308982 1789 dbSNP
rs1338179831 1797 dbSNP
rs139511622 1799 dbSNP
rs1278449302 1802 dbSNP
rs527812409 1803 dbSNP
rs942458950 1804 dbSNP
rs1300896437 1816 dbSNP
rs886528352 1822 dbSNP
rs1451332906 1832 dbSNP
rs1360567614 1835 dbSNP
rs1277371812 1836 dbSNP
rs547557068 1840 dbSNP
rs1311577192 1841 dbSNP
rs8653 1854 dbSNP
rs1211923421 1855 dbSNP
rs934960669 1857 dbSNP
rs1279212594 1859 dbSNP
rs1229456794 1862 dbSNP
rs1306396598 1864 dbSNP
rs1377454339 1864 dbSNP
rs1431764109 1864 dbSNP
rs373083822 1864 dbSNP
rs758630284 1864 dbSNP
rs796281180 1864 dbSNP
rs1371216991 1867 dbSNP
rs1371515817 1873 dbSNP
rs1491076830 1880 dbSNP
rs781590807 1880 dbSNP
rs1411470452 1881 dbSNP
rs3040235 1881 dbSNP
rs746231723 1881 dbSNP
rs1444121506 1882 dbSNP
rs1285129437 1883 dbSNP
rs199828893 1884 dbSNP
rs1210097220 1885 dbSNP
rs879196389 1886 dbSNP
rs1216309747 1891 dbSNP
rs1260045243 1892 dbSNP
rs1486545586 1893 dbSNP
rs1187932343 1895 dbSNP
rs3810939 1897 dbSNP
rs1179542803 1903 dbSNP
rs1468314711 1906 dbSNP
rs1037742095 1909 dbSNP
rs532438034 1914 dbSNP
rs1320459423 1921 dbSNP
rs1292571036 1922 dbSNP
rs183427609 1928 dbSNP
rs1172321286 1933 dbSNP
rs765494918 1934 dbSNP
rs1029267106 1939 dbSNP
rs1286747858 1946 dbSNP
rs890684776 1948 dbSNP
rs1044920438 1951 dbSNP
rs1334344566 1959 dbSNP
rs1293041609 1961 dbSNP
rs1009487465 1964 dbSNP
rs1348054428 1965 dbSNP
rs1444705041 1969 dbSNP
rs1310185373 1971 dbSNP
rs187711705 1973 dbSNP
rs1232123925 1975 dbSNP
rs1301192457 1977 dbSNP
rs905056648 1982 dbSNP
rs1020449565 1983 dbSNP
rs1272114317 1984 dbSNP
rs191712626 1986 dbSNP
rs977797478 1987 dbSNP
rs758647749 1992 dbSNP
rs1030296291 1996 dbSNP
rs1382439396 1997 dbSNP
rs1249031072 1998 dbSNP
rs1238339107 2001 dbSNP
rs1453292511 2003 dbSNP
rs780096623 2006 dbSNP
rs1396330081 2007 dbSNP
rs1478680663 2009 dbSNP
rs1167827948 2010 dbSNP
rs1394795920 2011 dbSNP
rs1266663470 2019 dbSNP
rs1411934974 2020 dbSNP
rs1332331248 2022 dbSNP
rs117988173 2024 dbSNP
rs1330100256 2025 dbSNP
rs986385583 2028 dbSNP
rs910708442 2032 dbSNP
rs916502846 2036 dbSNP
rs565752146 2038 dbSNP
rs149280828 2039 dbSNP
rs978972158 2040 dbSNP
rs924997949 2048 dbSNP
rs1269467159 2050 dbSNP
rs1458555325 2051 dbSNP
rs1337209224 2057 dbSNP
rs1174903580 2059 dbSNP
rs770342589 2059 dbSNP
rs1431005099 2061 dbSNP
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rs1467783104 2064 dbSNP
rs1052064437 2065 dbSNP
rs1254395277 2066 dbSNP
rs1451619723 2067 dbSNP
rs1193103576 2073 dbSNP
rs1246666779 2075 dbSNP
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rs982394929 2081 dbSNP
rs1476603845 2082 dbSNP
rs1239618148 2102 dbSNP
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rs1381652798 2138 dbSNP
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rs1307728112 4891 dbSNP
rs1269938722 4894 dbSNP
rs951630683 4894 dbSNP
rs1225552821 4896 dbSNP
rs1342550409 4908 dbSNP
rs1298890814 4909 dbSNP
rs112767944 4910 dbSNP
rs1224683733 4911 dbSNP
rs912718315 4913 dbSNP
rs1312514854 4916 dbSNP
rs1402667679 4921 dbSNP
rs952877573 4936 dbSNP
rs975626840 4938 dbSNP
rs1425318715 4939 dbSNP
rs1193827122 4941 dbSNP
rs1474583188 4946 dbSNP
rs1337970710 4948 dbSNP
rs1235398682 4951 dbSNP
rs1273851645 4960 dbSNP
rs1194374698 4966 dbSNP
rs921647712 4966 dbSNP
rs537813874 4969 dbSNP
rs879877183 4969 dbSNP
rs749940076 4971 dbSNP
rs1196888945 4975 dbSNP
rs1231095569 4977 dbSNP
rs914274761 4977 dbSNP
rs1359603454 4979 dbSNP
rs1328009673 5007 dbSNP
rs762414743 5017 dbSNP
rs1463854315 5021 dbSNP
rs766021011 5022 dbSNP
rs1017781928 5024 dbSNP
rs1460557375 5025 dbSNP
rs1411025503 5032 dbSNP
rs964456003 5040 dbSNP
rs976193441 5071 dbSNP
rs922955061 5074 dbSNP
rs1041678228 5076 dbSNP
rs1232807684 5077 dbSNP
rs1180184001 5080 dbSNP
rs549300461 5084 dbSNP
rs988671607 5085 dbSNP
rs1213323440 5086 dbSNP
rs914460282 5090 dbSNP
rs9366 5092 dbSNP
rs1177543764 5094 dbSNP
rs6548 5095 dbSNP
rs1278862688 5104 dbSNP
rs1444358102 5121 dbSNP
rs894514197 5125 dbSNP
rs1044198197 5130 dbSNP
rs905981556 5134 dbSNP
rs1026937567 5135 dbSNP
rs1347689764 5136 dbSNP
rs528680209 5148 dbSNP
rs552062395 5149 dbSNP
rs1166652582 5153 dbSNP
rs1157411779 5162 dbSNP
rs1442033315 5164 dbSNP
rs1239183630 5167 dbSNP
rs185436791 5174 dbSNP
rs1464636863 5185 dbSNP
rs1248659166 5190 dbSNP
rs11789208 5200 dbSNP
rs1222465012 5206 dbSNP
rs1316380701 5209 dbSNP
rs1507908 5220 dbSNP
rs1356757920 5224 dbSNP
rs1355696111 5225 dbSNP
rs1019802573 5229 dbSNP
rs1302585537 5231 dbSNP
rs1365125310 5232 dbSNP
rs1439892517 5232 dbSNP
rs965670490 5232 dbSNP
rs1057448254 5236 dbSNP
rs1344110320 5237 dbSNP
rs1028529958 5238 dbSNP
rs953239756 5238 dbSNP
rs115374767 5239 dbSNP
rs1192027758 5239 dbSNP
rs1261144171 5239 dbSNP
rs1335498046 5239 dbSNP
rs397714920 5239 dbSNP
rs57523032 5239 dbSNP
rs989926579 5240 dbSNP
rs1489270241 5245 dbSNP
rs914221138 5245 dbSNP
rs1008445904 5251 dbSNP
rs74629330 5252 dbSNP
rs1317587394 5257 dbSNP
rs897138803 5259 dbSNP
rs1310248176 5260 dbSNP
rs117967373 5262 dbSNP
rs1219460793 5271 dbSNP
rs1275260417 5276 dbSNP
rs1027255075 5278 dbSNP
rs977096863 5286 dbSNP
rs1309130807 5288 dbSNP
rs1275829576 5291 dbSNP
rs1205172432 5304 dbSNP
rs888668041 5308 dbSNP
rs1007474354 5318 dbSNP
rs569556822 5329 dbSNP
rs1189871038 5330 dbSNP
rs567636385 5331 dbSNP
rs1056035391 5332 dbSNP
rs1196012781 5333 dbSNP
rs894345074 5335 dbSNP
rs964852982 5342 dbSNP
rs1199822531 5345 dbSNP
rs1482199982 5346 dbSNP
rs1210550065 5351 dbSNP
rs931386520 5351 dbSNP
rs189859216 5354 dbSNP
rs1410981259 5355 dbSNP
rs1175987017 5361 dbSNP
rs1340629253 5362 dbSNP
rs1373969602 5363 dbSNP
rs887211809 5366 dbSNP
rs1313909528 5367 dbSNP
rs1340091425 5369 dbSNP
rs1381892166 5371 dbSNP
rs1398406061 5371 dbSNP
rs1303864877 5378 dbSNP
rs1461786331 5384 dbSNP
rs748002097 5391 dbSNP
rs747866363 5406 dbSNP
rs1004141606 5407 dbSNP
rs1185423927 5414 dbSNP
rs1029978498 5417 dbSNP
rs1271960780 5421 dbSNP
rs1422051282 5423 dbSNP
rs1258164293 5424 dbSNP
rs1182281493 5425 dbSNP
rs1362754239 5427 dbSNP
rs1255873304 5439 dbSNP
rs901419201 5447 dbSNP
rs997140974 5449 dbSNP
rs552890845 5455 dbSNP
rs1241979590 5457 dbSNP
rs1324090521 5459 dbSNP
rs555203806 5463 dbSNP
rs180771212 5472 dbSNP
rs773264447 5473 dbSNP
rs1487731070 5475 dbSNP
rs1190621125 5481 dbSNP
rs1333714007 5481 dbSNP
rs1447795311 5481 dbSNP
rs1161592907 5488 dbSNP
rs947303293 5492 dbSNP
rs967125793 5493 dbSNP
rs866354439 5496 dbSNP
rs977043139 5499 dbSNP
rs1438954177 5502 dbSNP
rs1190193102 5503 dbSNP
rs1393769819 5506 dbSNP
rs558396342 5528 dbSNP
rs1180205873 5529 dbSNP
rs928362518 5532 dbSNP
rs1266218924 5533 dbSNP
rs1207605281 5546 dbSNP
rs1357818525 5547 dbSNP
rs927133515 5549 dbSNP
rs938786882 5554 dbSNP
rs1265479764 5560 dbSNP
rs575186521 5563 dbSNP
rs78436083 5569 dbSNP
rs1352055763 5574 dbSNP
rs543785473 5574 dbSNP
rs929970405 5575 dbSNP
rs991452192 5585 dbSNP
rs1330790242 5588 dbSNP
rs1174599442 5591 dbSNP
rs1388700929 5592 dbSNP
rs1391571746 5596 dbSNP
rs1288303869 5600 dbSNP
rs762790268 5604 dbSNP
rs931126534 5610 dbSNP
rs1160299047 5611 dbSNP
rs560585432 5612 dbSNP
rs1399105576 5619 dbSNP
rs574443413 5623 dbSNP
rs1376758984 5633 dbSNP
rs1320547668 5634 dbSNP
rs1327306823 5638 dbSNP
rs184975687 5642 dbSNP
rs1267439971 5644 dbSNP
rs1273196931 5645 dbSNP
rs1487625949 5652 dbSNP
rs1368671495 5656 dbSNP
rs775817768 5657 dbSNP
rs560000600 5660 dbSNP
rs1344789251 5661 dbSNP
rs766285229 5663 dbSNP
rs1352726358 5670 dbSNP
rs1235713826 5679 dbSNP
rs1331829882 5684 dbSNP
rs1277721465 5686 dbSNP
rs1007135171 5695 dbSNP
rs879227238 5700 dbSNP
rs901323908 5701 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuccucguuccgccGUAGAGa 5'
                        |||||| 
Target 5' --------ucaaguCAUCUCa 3'
 		1 - 13
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000328252.3 | 3UTR | UCAAGUCAUCUCAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000328252.3 | 3UTR | UCAAGUCAUCUCAAGUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
94 hsa-miR-4708-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT095681 RBM27 RNA binding motif protein 27 2 4
MIRT104033 USP42 ubiquitin specific peptidase 42 2 6
MIRT114773 CMPK1 cytidine/uridine monophosphate kinase 1 2 2
MIRT246923 CCND1 cyclin D1 2 2
MIRT392569 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT443949 LRIT3 leucine rich repeat, Ig-like and transmembrane domains 3 2 2
MIRT446695 PAPPA pappalysin 1 2 2
MIRT447383 VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2 2
MIRT449321 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT449717 C1orf61 chromosome 1 open reading frame 61 2 2
MIRT449738 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 2 2
MIRT450531 PGLS 6-phosphogluconolactonase 2 2
MIRT455650 YARS tyrosyl-tRNA synthetase 2 2
MIRT458036 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT463468 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT466677 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 4
MIRT467789 SLC2A14 solute carrier family 2 member 14 2 2
MIRT468167 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT468652 SECISBP2L SECIS binding protein 2 like 2 6
MIRT469380 RER1 retention in endoplasmic reticulum sorting receptor 1 2 2
MIRT470346 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT472418 NCKAP1 NCK associated protein 1 2 2
MIRT474612 KLF3 Kruppel like factor 3 2 2
MIRT478703 CSRNP2 cysteine and serine rich nuclear protein 2 2 2
MIRT481008 BBC3 BCL2 binding component 3 2 4
MIRT483098 TFPI tissue factor pathway inhibitor 2 2
MIRT485113 SHISA6 shisa family member 6 2 2
MIRT497533 ZNF607 zinc finger protein 607 2 2
MIRT500644 TUBB2A tubulin beta 2A class IIa 2 6
MIRT500890 STRN striatin 2 4
MIRT501900 MED13 mediator complex subunit 13 2 2
MIRT506646 MAPK1 mitogen-activated protein kinase 1 2 4
MIRT512675 ENO4 enolase family member 4 2 2
MIRT516977 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT528754 RPS27 ribosomal protein S27 2 6
MIRT539670 ZBTB44 zinc finger and BTB domain containing 44 2 2
MIRT544129 PPIL1 peptidylprolyl isomerase like 1 2 2
MIRT546382 STOX2 storkhead box 2 2 4
MIRT562143 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT568713 TMEM30B transmembrane protein 30B 2 2
MIRT571029 CENPP centromere protein P 2 2
MIRT572781 ZNF277 zinc finger protein 277 2 2
MIRT573162 SLC30A9 solute carrier family 30 member 9 2 2
MIRT609126 NUDT3 nudix hydrolase 3 2 2
MIRT609284 OAS3 2'-5'-oligoadenylate synthetase 3 2 2
MIRT613430 GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2 2
MIRT613770 TTC38 tetratricopeptide repeat domain 38 2 2
MIRT616645 LRAT lecithin retinol acyltransferase 2 4
MIRT630892 SLC25A33 solute carrier family 25 member 33 2 2
MIRT636526 FAXC failed axon connections homolog 2 4
MIRT641394 NUBPL nucleotide binding protein like 2 2
MIRT641412 SCN2B sodium voltage-gated channel beta subunit 2 2 2
MIRT642528 CERS4 ceramide synthase 4 2 2
MIRT643186 HYPK huntingtin interacting protein K 2 2
MIRT647800 FRMD8 FERM domain containing 8 2 2
MIRT652150 TRIM71 tripartite motif containing 71 2 2
MIRT652602 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT661606 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT666339 SKAP2 src kinase associated phosphoprotein 2 2 2
MIRT670414 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT671122 ZNF573 zinc finger protein 573 2 2
MIRT671155 ANKRD9 ankyrin repeat domain 9 2 2
MIRT671338 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT671869 ZNF429 zinc finger protein 429 2 2
MIRT671974 IKZF3 IKAROS family zinc finger 3 2 2
MIRT672064 KIAA0930 KIAA0930 2 2
MIRT672654 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672673 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT672771 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672929 LRRC2 leucine rich repeat containing 2 2 2
MIRT673159 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673272 RUNDC1 RUN domain containing 1 2 2
MIRT673332 THAP1 THAP domain containing 1 2 2
MIRT673351 SLC35F6 solute carrier family 35 member F6 2 2
MIRT673667 ZNF440 zinc finger protein 440 2 2
MIRT673904 DCTN6 dynactin subunit 6 2 2
MIRT674096 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674401 MYCBP MYC binding protein 2 2
MIRT674525 PRR23A proline rich 23A 2 2
MIRT674793 NPR1 natriuretic peptide receptor 1 2 2
MIRT674833 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 2
MIRT675066 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT675080 CCR6 C-C motif chemokine receptor 6 2 2
MIRT675126 FSD2 fibronectin type III and SPRY domain containing 2 2 2
MIRT679401 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT689229 RPS19 ribosomal protein S19 2 2
MIRT694008 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT699671 SFT2D2 SFT2 domain containing 2 2 2
MIRT706213 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT706548 GJD2 gap junction protein delta 2 2 2
MIRT707418 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT710648 GLUL glutamate-ammonia ligase 2 2
MIRT719393 NPCA1 Nasopharyngeal carcinoma 1 2 2
MIRT720166 PNPO pyridoxamine 5'-phosphate oxidase 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4708-5p Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-4708-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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