miRTarBase - #MIRT446939


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pre-miRNA Information
pre-miRNA hsa-mir-1224   
Genomic Coordinates chr3: 184241405 - 184241489
Description Homo sapiens miR-1224 stem-loop
Comment This sequence was identified as a miRNA candidate by Berezikov et al .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-1224-5p
Sequence 1| GUGAGGACUCGGGAGGUGG |19
Evidence Experimental
Experiments RAKE
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs777592974 2 dbSNP
rs1367940309 6 dbSNP
rs1049510662 10 dbSNP
rs755127631 11 dbSNP
rs753013509 13 dbSNP
rs1390231699 16 dbSNP
rs919353291 18 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZMAT3   
Synonyms PAG608, WIG-1, WIG1
Description zinc finger matrin-type 3
Transcript NM_022470   
Other Transcripts NM_152240   
Expression
Putative miRNA Targets on ZMAT3
3'UTR of ZMAT3
(miRNA target sites are highlighted)		 
>ZMAT3|NM_022470|3'UTR
   1 TGATTATCATATTAAGATAGAGCAGCTTTTCCTGCCTGTTGTTTGCCTTTTGTCAACTTGCCCTGCTTTGTGGTCTTTTT
  81 GATATGAGTACATTCCTCTGCTTAATGTTAATACATGTAACCCACAGTGGTACCATGAGATGTCAAAACCTGGGGGCCCG
 161 GGGGCGGGGCGGGGGGAGGTGGGTGTGAAGAACGTGCTTCTTAGGTCATAACGCTTTTGCAGGGTCAATGGTGTTGAGCC
 241 GCTCATAGCATGTGACCTACCTACCCCATCAGAAATAACTTTTTATCTTGCTCAAGTTCTGGTCAACTAGTAGCCTGACG
 321 GCTTAGAACTTTGACTATTTAAAAGTTTCATTTTCTTTTGCAATTTTAGTTTTATGTACTGTTAAAGAATTGTACTGAAT
 401 TCTTTTTAGATCACAGTAAAAATAGGTTGGCAGAGATTTCAGTTTCCCAGGGCTTAACCAGAACCGCCACCTCAATGCAT
 481 TGTCAGTAGAATACATTATTAGAAACTGTTAAGGTCTTTCCCGGGACATTTTTTTCTGCCATTTTCTTTTGCAATTGTAG
 561 TTTTATGTACTGTTAAAGAATTGTATTGAATTCTTTTTAGATCAAAGTAAAAATAGGTCAGCAGAGATTTCAGTTTCCCA
 641 GGGCTTAACCAGAACCGCCACCTCAATGCATTGTCAGTAGGATACATTATTAGAAACTGTTAGGGTCTTTCCCAGGACAT
 721 TTTTTTTTCTGTATCATGTCTCCCCATCATTGAAGCGCAAATTTTCTTGAATTCAAATACTCCCAATGAGCTTGTATACT
 801 TCCAAACAGCTAAACTTGATTTCCAGTTGTGGATTTCACACATATAATTGCCGCCTTCTTCCCTCCTCTTTTTTCCCCCC
 881 TAGTTGAATCAGCTTGTCTAACAAGCCCATTTTCATGCCCCAGCTGTGCTGTGGGTTTTCCAAGCCTCATATTTGAATAT
 961 TCAATGAGTTTAAGATGGATATGATTTCAAAAAATAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG
1041 AGGCCGAAGCAGGCGGATCACGAGGTCAGGAGGTCGAGATCATCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAA
1121 TACAAAACATTAGCCGGGCGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAA
1201 CCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAA
1281 AAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATAGATATATTTTCCAGCAGTTTTTAGGAAACAAAGGTGTGTT
1361 TGATTTTCCAATTTAGAGTTACTTCATTGATAGTAACATGCGCTTATATCATGATCTAAACCATAAGTTCAGATTGCTTG
1441 ATATTTTGTTTTGCCAGACTTTTTTGATAATCTGATTCTTACGGTTTACTTACATTTTCCTCTGTCTTGCCAGTCTGGTG
1521 GCCATCCTGAAAAATATCACCACCTGCTGTTTTATACACAGAGGAATTTTTTAAAAAGCAAATAAAGTTTCACTATCTTC
1601 GTTTCCAGTAGAAATATACACGAACTATGGTTTTATTCTTTGTAATTCGGCTTTCTTGAAGATACTAACAAGTATATGAT
1681 AGATCACTTTGGCATCTGATAATTATATCAGTATTATTATTTTTGTTTTTTTGCGTTTAAAATAAGAAGTTGTATGAACC
1761 CAGGAGGTGGAGGTTGCAGTCAGCCAAGAATCGTGCCACTGCACTCCAGTCTGGGCGACAGAGCAATACTCCGTCTCCAA
1841 AAAAAAAAAAAAAGAAGCTATAATATATATCTAGATTAACTAATGGAGTGCTCTGTGAATATTCATTAACTACATTTTAT
1921 CTATTTACTATATTTTATATGGGTAAGACCAGTGGTCATCCGTATTTCTTTTGAAAGCCCACTTGATCAGGAAGTTTATA
2001 TTTTAAGCAGTATGTTTGCACAATGGTCAGTTCACATTTGATTGCTTGTATTACTAATTAGAGGTAAAACTTCTATTTTT
2081 TCTTGATAATTCTGTAGGCAAAAAAAATTGGGGAAGGCAAATTACAATCATTCTTCTTCTGTAATACTTTGGGACAATTT
2161 TTAAACAACTCAGACCCATGTTTAAAAACGAGTTTTGTGTGATTAACCCTTGTATAGTATCCAGTTACTGTCTTCTCTTG
2241 AAGTGGTGGTTCTTTGAGAAGTAGAATTATTTTGTAACTTTTCTTCTCCCAGAAACAGAAGAATCAAATACTATTCTGTT
2321 AGGATTCTATCTAGACCTGTGACTCTTAGTATAATAACCCTTTTATTATTATTATTATTATTATTTTTTCAGTAATCTAT
2401 AAAGTAGAGTTGCTTAGTTTTGAGCAATTTAGGGCTTTTCTTATTGGCCAGTAGGTTATTCATTTTGCTGCTAAATATAA
2481 TTTTTTGGTTAATTTTAACATTATAGTGCTGGCCGCTTGGTTCTATGATTACCTAAAAATCTAGTTTTTTTCCTCCATAG
2561 GTAGATGTGTGTGTATGCATACCCCCACACACACACGTACATATATGTTGTCATAGAGAGGTATTTCAACCCTTATTTCA
2641 AATAACAGTAGAAGATACGAACATGAATTTATATTTTGTAAAAATGTCATTCATCCACTTTGTTTTCCATTGGAAATAGT
2721 TTTATAAGAAGGGTTCCCCTTGCTCTCTCCACTTAACAATTTCATTATATACGTAGAAAAAGCAGCCGACTTAAGGGCTT
2801 GATGTTTTTTCAGGCCTTGTGGATTCAGGTTTCCAGTTTCCCAGTGCCCTTAATGGATGTTATGAATGCATAAGCACATT
2881 TTCTTTTAAAGAAAGAAGTTAGATTTATAGTGTTATTTCTTACTTGCTATATTTCTTTGCACTAAAAAAGAGCTATGTGT
2961 TTGTTTTATAGGACACTTTAGTACCGTATTGCCTACAATAACTCAGTTTGCTCCTTAAATTCCAAACTCTGGGAAGTTGA
3041 TAAATAACTTCCATGATCACTTGTAAAAGTTACATGCACATCTGAAAAAAAATCACAAATCTCTATGACAGTAGGTTATG
3121 TTTTGAGCTTGTTACCTTGCAGTATTCTTCTCTGTTCCATAGGTGAAAACAAAGGGTGACAGAGGTTATCAGGCAGGAAA
3201 TGCCTAAATAGATACATCTCTGCATGGTACAATTTCTCATATTCATGTATTCCATAAACAGTGTTTTTTCTCTGTTTAAG
3281 CAGACTGTTGTTTCTTCTGAGTCAGTGATATGTGATCTTCGTTGGTTTCATTTTGTGAAGCTCAGTCTGTCTCTGTAACA
3361 TACTTTAGGATTTGCACCTTGTGCTCCCCAGGAATTATGTTAGTGTCCTTTTCTATGCTGTCTTCAAGGATGGACAGAGG
3441 CCTAAACCACAACAACAACAAAAATTAGAAAAAAAAATACTTAGATTTCGGTAATCATCCATAGGAACTCATAGCATCAG
3521 TCTCTTTTCTCTGTGAATAATATCTTTGTGTAAGTTGTCATAAAAAATCAACGTTAGAAGATGACAATTAGAATTCTTCT
3601 TAGGTATTGAGGGTAAGAAGTTGTAAAGAAAGAAAATTCGTGTTTCAACTAAAAGATTGGATTGCATATACCTTTGAAGT
3681 GGTTTTGTAAAAAAAGTTCAGTTACTAAACTGAGTGTGCCCTGTAATCCTTTTGAGTGCACTGAAGATGCTTTGAAAATA
3761 CTTTGTTGGTCTTCACATTGTGCATCATGTCCTGCAACTTGTAAATATGTGCATGTTGTTTATGTTTGTCTGCCTGTCTC
3841 TTATTGCACTAAATTCTGCAAGGTGAATAATTTTTTTATACCATTTATTTGGAAAAAGTTCCTCCTCCAACTCTTCTTCA
3921 CTGACCTTTTAATTAGTTGGTAAACTTAGAAAACCAGGTAGGATTTTTGAAGCCCTGAGTTTAAAAGAAGAATCGTGGCT
4001 ATTTGACATCATCCTTACATTCCCCTGACTTAAAAAGCTAACAAGAAGCACGAGATCTTCCACCTCATTTTAGAAAGCTT
4081 TTCTACAGAACTATATGCTTGCTTATAGCTACCTATCTACAGTTTGAACAGGGAGAAAGGGAGATATGTATGTCTGGTTA
4161 CATCTTCCTTCACTCTTGAATTGGCTGGGACAGCAAGCAACAACAGTTTGAGGTCCAGTGACCTACGTAAAATGAGTGTC
4241 GTTTGTGTCAGGGGACACATGTAACTGTGCAACATGGTATTTTCTACAGGGAGGGCTAGGAAGGGTGGTTTTGGAACCTA
4321 ACCTACTTTGTGTCTTCATTGTCAGAACTAAGGTTGGAAATGCCCTTTAAAGAACTTGGTGAGGCATATGCTAGGACAAT
4401 AGAGCTGCTTTAGAAAGAAATTGAGACATGTTTTGTCAGGACAGATAAAAGTTTAATGCAGGCTTTTGAACAGATGTTTT
4481 AAAACAAATTTGACCTTACCAACTATTTTTTTCTTCTAGCCAAATCATTGTACAGGAGTTTCATATATGATAAAAAGTGT
4561 TTTGTTATTGTTTTTGCTTTCTTGGCAGGGGAGAACCCCTACCATTGTGAGCAGTTACTGTCACTCTGGCTGAATGGACA
4641 AATAGCTGTGTAAATAGCTTCTCATAAAACGCTTCTACTGATAGCTGTTTGACTTTTTCTTCCCGTTATGAATGGGAGGA
4721 ACATTTGTAAACTTCCTTTCTGGGTAGCTACCAAAAAACGTACTGGCTTATGGTCCCATGTGACCTTGTCTCCGTTAAGC
4801 CCAGAATCTGAGTGCCTTTAGCAAGTGTTAGCATTTCACAGAGAGAAGAGAGACAGAATTATTGCTATTAATCACCATTC
4881 ATAAATAGGAGCTTGGAATAACAAAGGTCTGTGTGAATTCTGTTCTACGTCTTTTTTTTCCCTTTTTTAAATAAATGTCA
4961 ATTTGATATCAAGTAAAACTATTGTCATTATTGATCAGAAACCATACATTCTGAAAATGAATCCAGTTTTCCCAAGCTGG
5041 CAGAAGTCAGAGATCATTTTTCACCTTGATCTGTGTTGCGTTTGTACTTAGTGAATGGCAGTGTGGTTGATTGGAAGAGC
5121 TTGACACTGATGTTTGGAAAAATTCTTTATTCTAGTGGTCATTTTCAAACTTGTCTTCTGTAGAGAGGGGAAAAATTATG
5201 TATTTGCAGCTAAAGCGAAGAGACTGGCACAATAATTATTAATTGTGTTAGTTCATTTCTATATTAAATGAAGCATCTTC
5281 ACAAATCAGGTTTGAAGCCATTAAAAGCAAAATTTTCCCTAGTTTAATTAATTTAAAATTCTAAATTGCCTGACTACTTA
5361 GAATCTTAGAAACGCCCTGCTAGACTGATTTTATTATAGAAATGTTAACATGTTCCTCAACATTTTCTCAAGAAAATTTT
5441 CAGACATATATCAAAGTTGAAAAAACTTTGCAGTATAACCACTGCTAGATTCTGCCATCAACATTTGACTATACTTGTAT
5521 TGCCATGTATCTGTTCATATTCTCTATCCCTCTTTTCATCCATCGATCCATCAGATTTTTTTTTTAAAGAACATTCCAAA
5601 GTAAATTTTAGGCAATACACTGCCCTAAATTCTTAGCATGGGTGTCATTAATTAAGGTTTAGTATTCGTTTAAATATCTA
5681 TTTTGAAAGTGGTGTATGAAGTTGATAATCTGAGCCAATTAACATACTTTTTTTTTTTTCCTCCTGTGGACTTTTGTCTT
5761 CCAGTTTCTCTTTTTGTGTGTACTTAGGGTGAGGGAGGACAATTCCTTTCAAACACAAGTTTATTTTAGAATTGGTCATT
5841 TTTAAGTGCTTGTCATAAATTTTAAAGTTTCAATATAATTTTTCTTTTCCCCACTTCTGATAATGTATTTTTGCCAAACT
5921 ATGCAGCTTCTTCAAAAAACTGTAAATTACTGATTGGGGTTTATGAAATCAGCGAATACCTCATTTCAATCTGTTGCTGC
6001 TTTTCTCCCTCTTGTCACTTCTCCTTTCACTACTTTCAGCTGCTCTACCAGAAGGTAGAGGGGAGTAAAGGGTCAAACCC
6081 CTATATAATTAGCTGTTTTAAACAACTCTAGGAGAGCAGATTAAGTAGCTTAGTAAGTTGAAACTATTAATTTTTCTAAA
6161 GAATTTGATTTGAATTCCTTGAGAATTGTAATTATCCACACTTCCTCCAGCTATAATTAGCAGAATTAAAAATGATTGTA
6241 CTGTACAATGAGTTGTTGAAATTGTAAGCCTTAGTAACCATCTTTAGCTTTATTGTAGTCATGTTTAGAAAAAATTATTT
6321 TTACATATGCCTTTATTTTTATGCCCACTTTTTGTGGATAAGATTCTTTAGATAAAATCTAAAGAATTTTAAGTGACTTT
6401 CTCCAGGTCATGAAGATTCAATGGGTAGAATTGAATCAGAATTGAAATGTTCCAGATTCATATTCTTGTGTGTGTTTGAT
6481 AAAATTCATGGCTTCCAAAGTAACTGAACACTTCCTTTGGGCCCTTGGAGGGAAAATCCATATTTTTACTAATTACACTT
6561 TTTTTTTTAGACATCTGGCAGTTCTTTGAACTTAAACATATTCTCATGGCCATAGTTCCAAATTAAGCCCGACGCAGTTG
6641 CTAAAAATCTTGCTGCACTGTTGAATACTAATAATGCAACATTTATTGGATGTTTTTGCATTTTGATGACCTTCATGATT
6721 CATTTATAAGTCTTTGTAAGTGCTTAAGTGACCCCCTCACTAGTGAAAATAATAAATGTTCTATATCATTTATTATTATT
6801 TGTGTATTCTCTACATGATATATTTTTTTAAGGAAGAGTAACTCCACATGTCAGAATGAGTGATATTATCCTAGGGCAAA
6881 GCGCAAATAGGGCAGTTTGTTTCTACTCTGCAAATATGGCATGTATAGGAACAAAACTCTTTTGGAGTGGCTGGTCATTG
6961 TTCTGCCCTCTTTTGGTACCTGAGTACCTTTCTGGGGTTTTGTAAATCGTGTGTCATTTGTAAGAATTTCACGTTAACTC
7041 TGCGTTACTTGGTGTTCACCTGTGGTATCCTTGACTGACCATAATGATTTAGTTTGGGTATGATGTGTCTGCTTTGAAAT
7121 GCCTTACTGGAGTATGTCAGATCCTGCTTTAAAGCATTCCATATATCTGCTGGGACAATAAGTTGCTTCTCCTTGGAAAT
7201 ATGCTCTAGATTCAGAAGCAAAACCGATTTTGCTTTCACCATTAAGGTTGCATTTTAATGCAGTTATTGTTTTAAATTAG
7281 AGAATAAAATGTAAAACCAAGGGAGGCTTTAGAACCCTTTATTGAATGGCATGGCAAACTTTTAAAACTGCTTTTGCTAT
7361 TTCACTAGAACTATCTTTGATAAAGGATATAGCTAAAAAATGTCAGCCCAAACTGTGTGTAATTAGGGTTGTTTATTAAA
7441 ATTTTCTCTAAATGTCATACAGAGGCTTAAGATCTGTGTATGCTGTTGGGTCGGAGTGCCAGTCACTGCTTTGGAAGTCT
7521 GTGTTCTGGGGCTGCAGAATGACAAACGTGTCATGGGATTAAAACCAATCAACTGTGAATTGTGAAATTGAAACTACTCT
7601 TTCGGTTTTATTTTCTTTAGCATATTGAGTATAGAAATCTGAAACTTATTTAAAATTTATACTGCTTTTGTTGATGGCTC
7681 ATTTTGGCTGTGTATCCTCACTTATGTACTGATTTCTGATAAAGGCTTGACATTATTATAACACGCATTTTGTGTTCCAG
7761 TTTAATAAAACGGTTTCTGAGTCTTGTCTGAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggUGGA--GGGCUCAGGAGUg 5'
            ||||  :::| |||:||| 
Target 5' taACCTACTTTGTGTCTTCAt 3'
 4319 - 4339 139.00 -15.30
2 
miRNA  3' ggUGGAGGGCUCAGGAGUg 5'
            ||:|: : :|||:||| 
Target 5' atACTTTGTTGGTCTTCAc 3'
 3758 - 3776 137.00 -16.70
3 
miRNA  3' gguGGAGGGCU----CAGGAGUg 5'
             |:|::| |    |||:||| 
Target 5' gtcCTTTTCTATGCTGTCTTCAa 3'
 3405 - 3427 130.00 -13.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN27005758 5 COSMIC
COSN30498063 6 COSMIC
COSN30507641 18 COSMIC
COSN31497159 24 COSMIC
COSN30456299 31 COSMIC
COSN27005759 52 COSMIC
COSN30478800 56 COSMIC
COSN19666590 59 COSMIC
COSN30527674 62 COSMIC
COSN30106576 63 COSMIC
COSN30508360 96 COSMIC
COSN18728217 134 COSMIC
COSN5529236 138 COSMIC
COSN31549024 190 COSMIC
COSN31553270 193 COSMIC
COSN31595738 195 COSMIC
COSN20781922 244 COSMIC
COSN31488233 306 COSMIC
COSN17123675 387 COSMIC
COSN17038163 464 COSMIC
COSN25610780 490 COSMIC
COSN23949306 605 COSMIC
COSN23955648 619 COSMIC
COSN23956033 620 COSMIC
COSN1933798 751 COSMIC
COSN9536445 875 COSMIC
COSN24451054 953 COSMIC
COSN7837855 1055 COSMIC
COSN14719014 1221 COSMIC
COSN18003158 1302 COSMIC
COSN18723904 1839 COSMIC
COSN32061601 1839 COSMIC
COSN25053381 1842 COSMIC
COSN8364622 1957 COSMIC
COSN20872975 2004 COSMIC
COSN22698572 2189 COSMIC
COSN28202028 2190 COSMIC
COSN27394172 2383 COSMIC
COSN32063460 2383 COSMIC
COSN22385384 2739 COSMIC
COSN28410822 2818 COSMIC
COSN23313189 3218 COSMIC
COSN27306455 3468 COSMIC
COSN6573034 3490 COSMIC
COSN9536444 3572 COSMIC
COSN28294698 3705 COSMIC
COSN29194293 3716 COSMIC
COSN22064011 3717 COSMIC
COSN5529235 3822 COSMIC
COSN9536443 3893 COSMIC
COSN23704880 4117 COSMIC
COSN22736068 4227 COSMIC
COSN16270838 4365 COSMIC
COSN27891475 4932 COSMIC
COSN2528206 5225 COSMIC
COSN15725552 5591 COSMIC
COSN27254531 5728 COSMIC
COSN27378074 6558 COSMIC
COSN17929125 6998 COSMIC
COSN28141799 7369 COSMIC
COSN1933797 7461 COSMIC
COSN7837854 7519 COSMIC
COSN7627595 7547 COSMIC
rs4607155 115 GWAS
rs7641761 2383 GWAS
rs6790867 4373 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1276656079 1 dbSNP
rs777486686 6 dbSNP
rs1340831815 10 dbSNP
rs1270467233 11 dbSNP
rs760589161 13 dbSNP
rs1381835015 17 dbSNP
rs752501401 18 dbSNP
rs767585129 23 dbSNP
rs1017996697 27 dbSNP
rs759489137 30 dbSNP
rs1430547126 32 dbSNP
rs1159890063 36 dbSNP
rs1353951351 38 dbSNP
rs1390735563 44 dbSNP
rs773173309 49 dbSNP
rs769986575 50 dbSNP
rs986531520 56 dbSNP
rs1322246506 80 dbSNP
rs1331353440 81 dbSNP
rs1378246890 84 dbSNP
rs1438122485 84 dbSNP
rs960466279 85 dbSNP
rs1269397576 95 dbSNP
rs1426840284 96 dbSNP
rs1211925811 103 dbSNP
rs1289189113 110 dbSNP
rs898116010 114 dbSNP
rs4607155 115 dbSNP
rs6806973 119 dbSNP
rs1182543184 125 dbSNP
rs142662415 130 dbSNP
rs1055858043 132 dbSNP
rs1162164947 133 dbSNP
rs61798176 134 dbSNP
rs1010863428 137 dbSNP
rs1346373503 140 dbSNP
rs907020765 151 dbSNP
rs892290444 157 dbSNP
rs527595322 159 dbSNP
rs773449690 160 dbSNP
rs890515860 162 dbSNP
rs868683843 164 dbSNP
rs1232042301 166 dbSNP
rs1284099638 169 dbSNP
rs561481042 170 dbSNP
rs541808559 171 dbSNP
rs1297785366 175 dbSNP
rs1451545486 177 dbSNP
rs1403609389 178 dbSNP
rs1474087518 184 dbSNP
rs769996932 193 dbSNP
rs1368974658 194 dbSNP
rs1473532811 212 dbSNP
rs1037907491 213 dbSNP
rs940971410 219 dbSNP
rs1369574609 220 dbSNP
rs1395629172 220 dbSNP
rs1370818444 221 dbSNP
rs148932432 223 dbSNP
rs1166101303 228 dbSNP
rs908153623 231 dbSNP
rs910903795 240 dbSNP
rs1394637643 241 dbSNP
rs1334158526 245 dbSNP
rs1341519568 250 dbSNP
rs1392175134 260 dbSNP
rs1189439524 261 dbSNP
rs1295428138 261 dbSNP
rs1341765097 262 dbSNP
rs1444288687 262 dbSNP
rs1241650362 264 dbSNP
rs1277013291 265 dbSNP
rs992929888 266 dbSNP
rs1443373934 268 dbSNP
rs1272849109 270 dbSNP
rs938857144 283 dbSNP
rs1389055189 286 dbSNP
rs955159859 288 dbSNP
rs752540095 299 dbSNP
rs1392871741 305 dbSNP
rs927696398 306 dbSNP
rs1302569400 312 dbSNP
rs386668727 312 dbSNP
rs1403562711 318 dbSNP
rs980970602 319 dbSNP
rs972165769 320 dbSNP
rs112587440 328 dbSNP
rs1016488058 329 dbSNP
rs969075087 331 dbSNP
rs1300182587 335 dbSNP
rs1343669682 339 dbSNP
rs1310596323 353 dbSNP
rs1232279475 363 dbSNP
rs1274802270 364 dbSNP
rs1006903207 366 dbSNP
rs1203368662 376 dbSNP
rs1247327922 382 dbSNP
rs1021998224 384 dbSNP
rs989377216 385 dbSNP
rs1436506525 388 dbSNP
rs1189858352 390 dbSNP
rs1250764470 391 dbSNP
rs1432183438 397 dbSNP
rs958712601 403 dbSNP
rs1285619544 404 dbSNP
rs1034377393 413 dbSNP
rs1467884746 427 dbSNP
rs748344726 436 dbSNP
rs1388545723 437 dbSNP
rs1334954349 451 dbSNP
rs1002949245 452 dbSNP
rs1322571133 454 dbSNP
rs907323717 462 dbSNP
rs1030936036 465 dbSNP
rs892980435 466 dbSNP
rs1169350316 469 dbSNP
rs1267428712 471 dbSNP
rs1329709794 475 dbSNP
rs781385073 479 dbSNP
rs942642189 485 dbSNP
rs371687199 490 dbSNP
rs1008695185 492 dbSNP
rs890285656 498 dbSNP
rs1029074655 502 dbSNP
rs369035712 512 dbSNP
rs1458183444 513 dbSNP
rs1180265481 522 dbSNP
rs1348259222 523 dbSNP
rs545943999 527 dbSNP
rs768827760 528 dbSNP
rs910881985 530 dbSNP
rs1407776682 532 dbSNP
rs1050758266 553 dbSNP
rs182775678 554 dbSNP
rs1221028505 557 dbSNP
rs918301104 567 dbSNP
rs1310465299 578 dbSNP
rs1356666211 586 dbSNP
rs940710827 590 dbSNP
rs972468814 601 dbSNP
rs886659882 604 dbSNP
rs1057319445 605 dbSNP
rs938861051 607 dbSNP
rs1203481431 609 dbSNP
rs927488238 615 dbSNP
rs980534911 619 dbSNP
rs947819019 620 dbSNP
rs115564946 633 dbSNP
rs989117510 641 dbSNP
rs1165497021 644 dbSNP
rs962212345 648 dbSNP
rs1350987899 650 dbSNP
rs909391631 651 dbSNP
rs985045057 656 dbSNP
rs778983049 657 dbSNP
rs1301089017 662 dbSNP
rs1378270167 672 dbSNP
rs1228410284 673 dbSNP
rs1302495978 680 dbSNP
rs1404345991 681 dbSNP
rs956367197 682 dbSNP
rs1227268491 683 dbSNP
rs1274893767 686 dbSNP
rs1483624359 693 dbSNP
rs1236244471 702 dbSNP
rs1483179997 705 dbSNP
rs1182548328 706 dbSNP
rs1030882016 716 dbSNP
rs959245479 717 dbSNP
rs1447706773 719 dbSNP
rs1168264645 720 dbSNP
rs1391016588 724 dbSNP
rs1034346512 729 dbSNP
rs199510929 729 dbSNP
rs1167165868 730 dbSNP
rs1448616656 733 dbSNP
rs987830839 736 dbSNP
rs1407681022 737 dbSNP
rs1157156493 740 dbSNP
rs757211359 750 dbSNP
rs1020359067 756 dbSNP
rs879237427 757 dbSNP
rs6804084 761 dbSNP
rs1211495377 770 dbSNP
rs996044051 776 dbSNP
rs1245499488 779 dbSNP
rs899229325 786 dbSNP
rs1187934389 798 dbSNP
rs575074065 805 dbSNP
rs1476486722 821 dbSNP
rs1489636787 825 dbSNP
rs6766762 845 dbSNP
rs1173398576 850 dbSNP
rs1004801686 852 dbSNP
rs190612740 853 dbSNP
rs1057373441 855 dbSNP
rs1386277352 857 dbSNP
rs1456261914 860 dbSNP
rs1320581552 861 dbSNP
rs918268554 862 dbSNP
rs1003566229 863 dbSNP
rs1036761582 869 dbSNP
rs906012962 870 dbSNP
rs1367411581 872 dbSNP
rs1229946417 875 dbSNP
rs1265549551 876 dbSNP
rs1329617649 878 dbSNP
rs1282480303 879 dbSNP
rs1197088913 881 dbSNP
rs1448781842 881 dbSNP
rs1221679400 892 dbSNP
rs1044933712 900 dbSNP
rs947549576 905 dbSNP
rs1365554553 907 dbSNP
rs1478235011 908 dbSNP
rs985402442 931 dbSNP
rs1409692745 932 dbSNP
rs568936919 934 dbSNP
rs552222818 940 dbSNP
rs1437325581 941 dbSNP
rs1344784129 942 dbSNP
rs186939713 942 dbSNP
rs1386559282 948 dbSNP
rs1403080562 949 dbSNP
rs1322559330 951 dbSNP
rs143562825 954 dbSNP
rs140101341 962 dbSNP
rs1053534367 965 dbSNP
rs1349214642 976 dbSNP
rs1389924695 977 dbSNP
rs934979042 983 dbSNP
rs183710170 985 dbSNP
rs987391024 995 dbSNP
rs1176320554 997 dbSNP
rs1479771223 998 dbSNP
rs954764908 1001 dbSNP
rs957727968 1002 dbSNP
rs1452354183 1005 dbSNP
rs1224482942 1006 dbSNP
rs146089368 1007 dbSNP
rs1007101024 1008 dbSNP
rs1182878301 1012 dbSNP
rs1365456676 1015 dbSNP
rs1239945465 1017 dbSNP
rs974950506 1018 dbSNP
rs1162067957 1022 dbSNP
rs1414100701 1028 dbSNP
rs1426125953 1030 dbSNP
rs963188017 1036 dbSNP
rs889628168 1040 dbSNP
rs1210212781 1042 dbSNP
rs1409589156 1044 dbSNP
rs1029508789 1045 dbSNP
rs562007538 1046 dbSNP
rs1016300420 1048 dbSNP
rs747697101 1049 dbSNP
rs548222473 1050 dbSNP
rs1357102336 1054 dbSNP
rs1248499784 1061 dbSNP
rs998080185 1065 dbSNP
rs1482643014 1070 dbSNP
rs1004957298 1075 dbSNP
rs1313846412 1076 dbSNP
rs1440583084 1077 dbSNP
rs1186270654 1079 dbSNP
rs950707596 1081 dbSNP
rs1301927113 1091 dbSNP
rs1237590610 1096 dbSNP
rs1036125691 1099 dbSNP
rs1445898234 1107 dbSNP
rs1166391990 1111 dbSNP
rs1002894035 1116 dbSNP
rs896813154 1117 dbSNP
rs906079725 1128 dbSNP
rs1361366746 1129 dbSNP
rs1429525116 1135 dbSNP
rs1168803368 1136 dbSNP
rs1399297735 1138 dbSNP
rs1394842851 1139 dbSNP
rs1044660020 1140 dbSNP
rs1437620597 1142 dbSNP
rs1011712282 1147 dbSNP
rs1454641243 1148 dbSNP
rs893346714 1151 dbSNP
rs1464884681 1153 dbSNP
rs1361357410 1154 dbSNP
rs1071618 1165 dbSNP
rs1199851959 1166 dbSNP
rs1408791407 1168 dbSNP
rs1462319726 1169 dbSNP
rs1186056825 1172 dbSNP
rs1247054261 1185 dbSNP
rs562489959 1195 dbSNP
rs1194837219 1196 dbSNP
rs538992149 1203 dbSNP
rs1449745793 1204 dbSNP
rs1172571536 1205 dbSNP
rs1407392534 1210 dbSNP
rs1242266276 1211 dbSNP
rs1318570311 1217 dbSNP
rs28403542 1221 dbSNP
rs1383032632 1227 dbSNP
rs1297970029 1228 dbSNP
rs577015575 1231 dbSNP
rs1256449628 1233 dbSNP
rs1203817877 1234 dbSNP
rs1325531253 1235 dbSNP
rs35685788 1236 dbSNP
rs540810784 1239 dbSNP
rs1464938057 1240 dbSNP
rs1272635861 1243 dbSNP
rs1230846247 1246 dbSNP
rs1264816476 1247 dbSNP
rs1366152299 1248 dbSNP
rs1198526860 1249 dbSNP
rs1430640702 1254 dbSNP
rs1481684090 1255 dbSNP
rs1157553018 1257 dbSNP
rs1314660664 1258 dbSNP
rs1388065606 1259 dbSNP
rs1454363381 1263 dbSNP
rs1290925301 1265 dbSNP
rs1394591556 1266 dbSNP
rs1283638982 1273 dbSNP
rs1347126455 1274 dbSNP
rs1226550009 1278 dbSNP
rs1381801477 1280 dbSNP
rs1240476409 1281 dbSNP
rs1263324596 1289 dbSNP
rs1487927851 1291 dbSNP
rs372169251 1293 dbSNP
rs1303927304 1294 dbSNP
rs369179470 1295 dbSNP
rs1442188994 1296 dbSNP
rs376058531 1297 dbSNP
rs1169976284 1298 dbSNP
rs371471135 1299 dbSNP
rs1384162519 1300 dbSNP
rs367681102 1301 dbSNP
rs1425334968 1302 dbSNP
rs374256798 1303 dbSNP
rs1176531065 1304 dbSNP
rs13083680 1305 dbSNP
rs57477590 1306 dbSNP
rs1164517696 1307 dbSNP
rs1167673349 1307 dbSNP
rs1387239518 1307 dbSNP
rs1414517550 1307 dbSNP
rs1427591748 1307 dbSNP
rs1444072234 1307 dbSNP
rs1444346385 1307 dbSNP
rs1491461951 1307 dbSNP
rs868388982 1307 dbSNP
rs1479640534 1308 dbSNP
rs1207314582 1309 dbSNP
rs1254763432 1309 dbSNP
rs1460929038 1309 dbSNP
rs1184220811 1310 dbSNP
rs1253929576 1310 dbSNP
rs867753749 1310 dbSNP
rs1186119970 1311 dbSNP
rs1245221058 1311 dbSNP
rs1447841190 1311 dbSNP
rs1420028874 1312 dbSNP
rs1207320865 1313 dbSNP
rs1411439698 1313 dbSNP
rs1173955677 1315 dbSNP
rs1342979746 1316 dbSNP
rs1469881686 1317 dbSNP
rs1291225539 1318 dbSNP
rs1338072264 1318 dbSNP
rs1386040430 1319 dbSNP
rs7645117 1320 dbSNP
rs1177829489 1321 dbSNP
rs7633318 1321 dbSNP
rs1323861793 1323 dbSNP
rs1189186521 1324 dbSNP
rs1476273275 1324 dbSNP
rs1313940428 1325 dbSNP
rs1385874874 1326 dbSNP
rs1480701193 1326 dbSNP
rs1223683746 1327 dbSNP
rs1346541076 1327 dbSNP
rs1224718330 1328 dbSNP
rs1232846996 1328 dbSNP
rs1292107040 1328 dbSNP
rs1345237609 1328 dbSNP
rs1433352645 1328 dbSNP
rs1349126692 1330 dbSNP
rs1162513146 1331 dbSNP
rs1310405896 1332 dbSNP
rs1405931129 1335 dbSNP
rs1305493961 1336 dbSNP
rs73187210 1343 dbSNP
rs1280173724 1344 dbSNP
rs865987505 1370 dbSNP
rs1226876046 1371 dbSNP
rs1291310139 1373 dbSNP
rs1359890519 1379 dbSNP
rs1364491381 1383 dbSNP
rs1291420573 1401 dbSNP
rs1182395338 1402 dbSNP
rs1234159401 1403 dbSNP
rs1471516786 1406 dbSNP
rs185381397 1408 dbSNP
rs1368796657 1412 dbSNP
rs1165813828 1414 dbSNP
rs1395011119 1415 dbSNP
rs923611443 1421 dbSNP
rs1471499883 1422 dbSNP
rs941116084 1423 dbSNP
rs1414015970 1424 dbSNP
rs1337679217 1425 dbSNP
rs538167034 1427 dbSNP
rs1450452421 1429 dbSNP
rs1314644071 1430 dbSNP
rs1383734219 1439 dbSNP
rs1182817122 1441 dbSNP
rs1272257011 1443 dbSNP
rs575197637 1444 dbSNP
rs1196372066 1457 dbSNP
rs933011216 1458 dbSNP
rs921807910 1460 dbSNP
rs1182380134 1464 dbSNP
rs1054896452 1466 dbSNP
rs1243405178 1467 dbSNP
rs1446044598 1474 dbSNP
rs1186248495 1482 dbSNP
rs1208260882 1494 dbSNP
rs1475287360 1499 dbSNP
rs1168999904 1512 dbSNP
rs1489610760 1518 dbSNP
rs974672574 1523 dbSNP
rs937469795 1537 dbSNP
rs927469428 1543 dbSNP
rs1454825479 1558 dbSNP
rs981677457 1561 dbSNP
rs1327538204 1564 dbSNP
rs1290755873 1567 dbSNP
rs1227808189 1574 dbSNP
rs1271871582 1579 dbSNP
rs1321275129 1580 dbSNP
rs1202524121 1582 dbSNP
rs1263268758 1584 dbSNP
rs1462255233 1595 dbSNP
rs558540366 1600 dbSNP
rs1229612755 1601 dbSNP
rs1446797247 1605 dbSNP
rs59096452 1611 dbSNP
rs1300388816 1614 dbSNP
rs1344297148 1616 dbSNP
rs1298612305 1620 dbSNP
rs1479765564 1621 dbSNP
rs538702900 1622 dbSNP
rs989180599 1648 dbSNP
rs1384456495 1649 dbSNP
rs963173849 1652 dbSNP
rs1390945530 1654 dbSNP
rs1382593128 1656 dbSNP
rs1320001510 1658 dbSNP
rs909080261 1665 dbSNP
rs1283837937 1672 dbSNP
rs1325074769 1674 dbSNP
rs983481982 1678 dbSNP
rs950778590 1679 dbSNP
rs1033481249 1686 dbSNP
rs985578848 1688 dbSNP
rs953859758 1693 dbSNP
rs1264356678 1710 dbSNP
rs566624157 1712 dbSNP
rs1029477556 1715 dbSNP
rs1035790282 1717 dbSNP
rs1390645936 1719 dbSNP
rs7610870 1723 dbSNP
rs970086175 1725 dbSNP
rs1023634451 1728 dbSNP
rs11439855 1733 dbSNP
rs1454542897 1733 dbSNP
rs1160493773 1734 dbSNP
rs1480095298 1735 dbSNP
rs1011867512 1742 dbSNP
rs893294486 1751 dbSNP
rs1435000083 1752 dbSNP
rs767204304 1759 dbSNP
rs1240815528 1760 dbSNP
rs1005595275 1762 dbSNP
rs1268239962 1763 dbSNP
rs888138970 1765 dbSNP
rs1031865527 1786 dbSNP
rs1293167216 1787 dbSNP
rs999038985 1789 dbSNP
rs1055265940 1790 dbSNP
rs1249973461 1791 dbSNP
rs902229028 1792 dbSNP
rs937773914 1793 dbSNP
rs1383557151 1805 dbSNP
rs1423789944 1807 dbSNP
rs1463817122 1808 dbSNP
rs906023294 1816 dbSNP
rs1297524668 1832 dbSNP
rs1045972712 1833 dbSNP
rs1323402075 1838 dbSNP
rs1254789533 1839 dbSNP
rs200804021 1839 dbSNP
rs1234713171 1840 dbSNP
rs1245740170 1849 dbSNP
rs1051527222 1854 dbSNP
rs11337660 1854 dbSNP
rs1251242317 1854 dbSNP
rs1293008934 1854 dbSNP
rs56855863 1854 dbSNP
rs869234679 1854 dbSNP
rs1481004757 1855 dbSNP
rs1200550157 1858 dbSNP
rs950202555 1860 dbSNP
rs932981280 1864 dbSNP
rs1444275047 1867 dbSNP
rs1184413481 1869 dbSNP
rs533974224 1873 dbSNP
rs553451513 1874 dbSNP
rs900200366 1875 dbSNP
rs1038915295 1876 dbSNP
rs1169658993 1878 dbSNP
rs1354981653 1880 dbSNP
rs1432522533 1889 dbSNP
rs1334073910 1901 dbSNP
rs73187208 1912 dbSNP
rs1316708328 1916 dbSNP
rs369163355 1919 dbSNP
rs909153383 1923 dbSNP
rs1295523486 1924 dbSNP
rs983218756 1930 dbSNP
rs1460917484 1940 dbSNP
rs925997088 1955 dbSNP
rs1469127756 1956 dbSNP
rs1239360574 1958 dbSNP
rs985494555 1961 dbSNP
rs181352604 1962 dbSNP
rs922436901 1964 dbSNP
rs928671596 1982 dbSNP
rs531646033 1983 dbSNP
rs1478785708 1994 dbSNP
rs1174155575 2018 dbSNP
rs976514880 2034 dbSNP
rs981589285 2038 dbSNP
rs1338303378 2049 dbSNP
rs1343017672 2070 dbSNP
rs1015904033 2073 dbSNP
rs1378342795 2082 dbSNP
rs1363062950 2087 dbSNP
rs1188146918 2096 dbSNP
rs1281924408 2101 dbSNP
rs1373792345 2102 dbSNP
rs751134131 2106 dbSNP
rs1022992161 2108 dbSNP
rs1224136338 2108 dbSNP
rs1315312095 2108 dbSNP
rs1215293311 2111 dbSNP
rs1033385819 2117 dbSNP
rs990380755 2131 dbSNP
rs957584283 2136 dbSNP
rs1197274584 2144 dbSNP
rs1268017489 2148 dbSNP
rs1277041230 2153 dbSNP
rs1202773934 2163 dbSNP
rs1031937322 2166 dbSNP
rs906244339 2175 dbSNP
rs188913024 2189 dbSNP
rs552197419 2197 dbSNP
rs766839536 2207 dbSNP
rs1361647696 2212 dbSNP
rs1225686137 2215 dbSNP
rs1402162253 2216 dbSNP
rs997304729 2221 dbSNP
rs1301849845 2232 dbSNP
rs1345381582 2265 dbSNP
rs1405662494 2276 dbSNP
rs1276727903 2283 dbSNP
rs1343801955 2286 dbSNP
rs1223492311 2287 dbSNP
rs1285216483 2295 dbSNP
rs900150005 2297 dbSNP
rs1038654228 2308 dbSNP
rs1290981619 2309 dbSNP
rs941711574 2310 dbSNP
rs1297905532 2311 dbSNP
rs763378515 2314 dbSNP
rs1047639776 2316 dbSNP
rs1053759615 2319 dbSNP
rs929129312 2328 dbSNP
rs1381714677 2329 dbSNP
rs928519103 2330 dbSNP
rs1162013271 2332 dbSNP
rs1365309618 2339 dbSNP
rs1338555586 2343 dbSNP
rs1406512076 2353 dbSNP
rs532184110 2357 dbSNP
rs1396590901 2370 dbSNP
rs1334131006 2371 dbSNP
rs1402966956 2374 dbSNP
rs560175877 2377 dbSNP
rs61798175 2380 dbSNP
rs201405320 2381 dbSNP
rs530283941 2381 dbSNP
rs1314168269 2382 dbSNP
rs7641761 2383 dbSNP
rs766241907 2384 dbSNP
rs1436734436 2385 dbSNP
rs1170384515 2386 dbSNP
rs1204549317 2386 dbSNP
rs1442439945 2386 dbSNP
rs932657005 2386 dbSNP
rs1473328669 2389 dbSNP
rs1332083279 2390 dbSNP
rs146675821 2390 dbSNP
rs1472671616 2391 dbSNP
rs1236143970 2392 dbSNP
rs1190193805 2402 dbSNP
rs1443535948 2404 dbSNP
rs1251763032 2405 dbSNP
rs916013791 2407 dbSNP
rs922654028 2408 dbSNP
rs1340845904 2410 dbSNP
rs976817551 2426 dbSNP
rs1268365184 2427 dbSNP
rs1338622766 2434 dbSNP
rs1202343646 2444 dbSNP
rs1215055062 2449 dbSNP
rs544465317 2458 dbSNP
rs575539520 2461 dbSNP
rs1483756116 2471 dbSNP
rs961485488 2476 dbSNP
rs1243304913 2477 dbSNP
rs1274908483 2481 dbSNP
rs1227446984 2482 dbSNP
rs558870659 2498 dbSNP
rs1031927582 2502 dbSNP
rs977738383 2504 dbSNP
rs1371884891 2514 dbSNP
rs955715428 2515 dbSNP
rs544994312 2520 dbSNP
rs1425951845 2523 dbSNP
rs1245284570 2529 dbSNP
rs1418513504 2530 dbSNP
rs1336335466 2538 dbSNP
rs1403117055 2539 dbSNP
rs1397596241 2540 dbSNP
rs997442923 2548 dbSNP
rs1034018817 2549 dbSNP
rs964465718 2551 dbSNP
rs1316008503 2554 dbSNP
rs1001838303 2557 dbSNP
rs970397383 2557 dbSNP
rs573192497 2560 dbSNP
rs1280015614 2561 dbSNP
rs1024704703 2567 dbSNP
rs553410987 2568 dbSNP
rs773572929 2569 dbSNP
rs1005801864 2571 dbSNP
rs1346641329 2573 dbSNP
rs1202976889 2575 dbSNP
rs770090282 2577 dbSNP
rs1260151138 2582 dbSNP
rs6443616 2587 dbSNP
rs1265900695 2588 dbSNP
rs1479509992 2589 dbSNP
rs568213830 2589 dbSNP
rs1000852531 2594 dbSNP
rs554469842 2597 dbSNP
rs1049973511 2601 dbSNP
rs932624409 2603 dbSNP
rs1412035557 2620 dbSNP
rs1299980609 2621 dbSNP
rs1165319645 2622 dbSNP
rs1473340901 2640 dbSNP
rs185020738 2647 dbSNP
rs1301414754 2658 dbSNP
rs367629577 2660 dbSNP
rs769060711 2663 dbSNP
rs940154217 2665 dbSNP
rs915959798 2674 dbSNP
rs1217739954 2677 dbSNP
rs1288819675 2678 dbSNP
rs1490014258 2685 dbSNP
rs569162087 2685 dbSNP
rs181938856 2701 dbSNP
rs1054586386 2702 dbSNP
rs1268215767 2706 dbSNP
rs1251973425 2709 dbSNP
rs1179935463 2717 dbSNP
rs1363382962 2718 dbSNP
rs908369109 2724 dbSNP
rs935980783 2732 dbSNP
rs1220339448 2736 dbSNP
rs1449480169 2744 dbSNP
rs1423997561 2758 dbSNP
rs924637444 2758 dbSNP
rs983934137 2759 dbSNP
rs931149865 2762 dbSNP
rs978059268 2767 dbSNP
rs1291608359 2772 dbSNP
rs926500590 2773 dbSNP
rs1311983743 2774 dbSNP
rs532120816 2776 dbSNP
rs566364454 2787 dbSNP
rs1221566307 2788 dbSNP
rs1266481395 2793 dbSNP
rs1489514490 2795 dbSNP
rs1194103652 2799 dbSNP
rs1237839180 2803 dbSNP
rs1286376548 2811 dbSNP
rs1440596714 2811 dbSNP
rs955626703 2821 dbSNP
rs1180726391 2828 dbSNP
rs1383219347 2834 dbSNP
rs922859468 2840 dbSNP
rs1443709198 2843 dbSNP
rs980704293 2860 dbSNP
rs1370066869 2863 dbSNP
rs1230212179 2865 dbSNP
rs1297142157 2866 dbSNP
rs1352387528 2868 dbSNP
rs1280252145 2874 dbSNP
rs1334280820 2875 dbSNP
rs1381046092 2876 dbSNP
rs1435885049 2902 dbSNP
rs975572871 2912 dbSNP
rs964182488 2916 dbSNP
rs1348303756 2922 dbSNP
rs190242446 2929 dbSNP
rs1225839989 2943 dbSNP
rs529758875 2949 dbSNP
rs570315171 2950 dbSNP
rs1406248211 2951 dbSNP
rs1200759547 2952 dbSNP
rs201742540 2955 dbSNP
rs34640173 2957 dbSNP
rs377467253 2957 dbSNP
rs951700308 2970 dbSNP
rs1157563304 2973 dbSNP
rs1182190487 2975 dbSNP
rs1257971291 2985 dbSNP
rs1426710352 2986 dbSNP
rs561488773 2991 dbSNP
rs1473883081 2993 dbSNP
rs1169639474 2995 dbSNP
rs956519790 2997 dbSNP
rs1466671983 3006 dbSNP
rs1173832134 3008 dbSNP
rs1404839813 3013 dbSNP
rs1032509011 3024 dbSNP
rs1413391316 3025 dbSNP
rs993586953 3037 dbSNP
rs1476764107 3038 dbSNP
rs568665398 3041 dbSNP
rs1381082728 3047 dbSNP
rs1278044964 3053 dbSNP
rs1248029045 3073 dbSNP
rs1199214440 3090 dbSNP
rs1464261587 3093 dbSNP
rs904701168 3094 dbSNP
rs780287362 3096 dbSNP
rs1046064949 3098 dbSNP
rs1484768022 3108 dbSNP
rs185816147 3109 dbSNP
rs1263740463 3110 dbSNP
rs1329730129 3114 dbSNP
rs1277852895 3119 dbSNP
rs770843286 3129 dbSNP
rs1041064132 3144 dbSNP
rs1218658088 3144 dbSNP
rs894349347 3146 dbSNP
rs1276821904 3147 dbSNP
rs1361334283 3154 dbSNP
rs1451999943 3161 dbSNP
rs531051795 3175 dbSNP
rs1298141720 3181 dbSNP
rs565225539 3185 dbSNP
rs887167277 3187 dbSNP
rs1281508110 3200 dbSNP
rs936093673 3202 dbSNP
rs1048972997 3206 dbSNP
rs1542 3211 dbSNP
rs1280919356 3212 dbSNP
rs1314968842 3215 dbSNP
rs1215597630 3225 dbSNP
rs1286699292 3226 dbSNP
rs191331256 3232 dbSNP
rs1245635880 3233 dbSNP
rs374916603 3234 dbSNP
rs1478029416 3239 dbSNP
rs1192630217 3249 dbSNP
rs926468133 3252 dbSNP
rs1276216379 3257 dbSNP
rs933995144 3260 dbSNP
rs922839272 3264 dbSNP
rs1158454754 3268 dbSNP
rs186962031 3269 dbSNP
rs1175983722 3270 dbSNP
rs550005805 3270 dbSNP
rs755842422 3282 dbSNP
rs1412258352 3284 dbSNP
rs1437265088 3287 dbSNP
rs1276880407 3289 dbSNP
rs1426732728 3290 dbSNP
rs1371414233 3293 dbSNP
rs543060925 3299 dbSNP
rs1448540988 3311 dbSNP
rs574047418 3311 dbSNP
rs910081626 3315 dbSNP
rs1220162117 3320 dbSNP
rs1289050171 3321 dbSNP
rs1451729869 3322 dbSNP
rs557528742 3326 dbSNP
rs1223091912 3327 dbSNP
rs956581511 3330 dbSNP
rs1457060573 3331 dbSNP
rs1032061893 3336 dbSNP
rs538022517 3340 dbSNP
rs979608965 3347 dbSNP
rs951773567 3349 dbSNP
rs1026494662 3357 dbSNP
rs971721196 3360 dbSNP
rs1310497691 3362 dbSNP
rs760616199 3366 dbSNP
rs1413676297 3377 dbSNP
rs1406065074 3381 dbSNP
rs1325643899 3383 dbSNP
rs1398139324 3384 dbSNP
rs1446335683 3387 dbSNP
rs971512018 3398 dbSNP
rs569098614 3408 dbSNP
rs1235163108 3413 dbSNP
rs866586621 3415 dbSNP
rs1341666812 3419 dbSNP
rs1378918468 3428 dbSNP
rs1243476332 3435 dbSNP
rs997052900 3445 dbSNP
rs144413101 3451 dbSNP
rs1270293160 3457 dbSNP
rs184139101 3459 dbSNP
rs887127589 3460 dbSNP
rs1048457398 3462 dbSNP
rs1302764259 3465 dbSNP
rs1446523957 3466 dbSNP
rs894297012 3468 dbSNP
rs1173671110 3474 dbSNP
rs1237221828 3478 dbSNP
rs144821245 3478 dbSNP
rs561542629 3478 dbSNP
rs1428566017 3479 dbSNP
rs546284880 3489 dbSNP
rs1421576656 3491 dbSNP
rs1032822394 3496 dbSNP
rs1000043681 3516 dbSNP
rs1402694643 3529 dbSNP
rs903235911 3533 dbSNP
rs1333291709 3542 dbSNP
rs1042196094 3543 dbSNP
rs934003235 3544 dbSNP
rs529744410 3553 dbSNP
rs1180017527 3557 dbSNP
rs1484173525 3558 dbSNP
rs567242140 3560 dbSNP
rs1211620820 3569 dbSNP
rs1259635308 3569 dbSNP
rs917805754 3571 dbSNP
rs1482773011 3572 dbSNP
rs1052795049 3573 dbSNP
rs550297052 3583 dbSNP
rs1443286088 3584 dbSNP
rs934987969 3587 dbSNP
rs1261633177 3595 dbSNP
rs924963731 3596 dbSNP
rs1194521034 3600 dbSNP
rs530988677 3608 dbSNP
rs910150747 3609 dbSNP
rs780814426 3611 dbSNP
rs930152245 3625 dbSNP
rs565158875 3632 dbSNP
rs1402731300 3636 dbSNP
rs979197927 3639 dbSNP
rs919012716 3640 dbSNP
rs550322477 3641 dbSNP
rs1279565780 3643 dbSNP
rs1328789100 3647 dbSNP
rs972259580 3655 dbSNP
rs971074698 3664 dbSNP
rs1024414666 3668 dbSNP
rs1275066834 3669 dbSNP
rs1346217791 3677 dbSNP
rs1226995031 3679 dbSNP
rs1284278744 3688 dbSNP
rs1488265080 3696 dbSNP
rs867346444 3699 dbSNP
rs1314035192 3700 dbSNP
rs1431509298 3701 dbSNP
rs77173001 3712 dbSNP
rs1368235097 3717 dbSNP
rs975519162 3717 dbSNP
rs751008718 3719 dbSNP
rs1462216203 3720 dbSNP
rs1367566807 3725 dbSNP
rs1359605802 3726 dbSNP
rs1299885720 3734 dbSNP
rs1420243550 3734 dbSNP
rs999993012 3739 dbSNP
rs571316262 3746 dbSNP
rs1019844260 3747 dbSNP
rs1332429152 3749 dbSNP
rs1237449133 3751 dbSNP
rs1004897335 3758 dbSNP
rs1020358186 3760 dbSNP
rs998703850 3763 dbSNP
rs1027433287 3764 dbSNP
rs542644774 3769 dbSNP
rs905236482 3778 dbSNP
rs1209285733 3783 dbSNP
rs1268095431 3797 dbSNP
rs1045181163 3806 dbSNP
rs1176938702 3809 dbSNP
rs1379456444 3811 dbSNP
rs139654879 3813 dbSNP
rs896337711 3828 dbSNP
rs1366619762 3840 dbSNP
rs1052342839 3844 dbSNP
rs935280601 3849 dbSNP
rs924971427 3851 dbSNP
rs942716761 3856 dbSNP
rs191641607 3870 dbSNP
rs771271234 3881 dbSNP
rs1048629668 3886 dbSNP
rs1309836183 3893 dbSNP
rs921659117 3894 dbSNP
rs930137808 3898 dbSNP
rs1219744051 3901 dbSNP
rs1323883454 3907 dbSNP
rs1294439166 3910 dbSNP
rs527730982 3917 dbSNP
rs74907951 3921 dbSNP
rs1178690705 3928 dbSNP
rs971822338 3935 dbSNP
rs1353980094 3939 dbSNP
rs983044709 3948 dbSNP
rs765824203 3952 dbSNP
rs1423191978 3960 dbSNP
rs1165318843 3979 dbSNP
rs77043350 3980 dbSNP
rs1289638426 3990 dbSNP
rs1027237674 3994 dbSNP
rs974034228 3998 dbSNP
rs969390287 4008 dbSNP
rs150911428 4016 dbSNP
rs1023702329 4029 dbSNP
rs1291434571 4032 dbSNP
rs1300288888 4037 dbSNP
rs991121828 4051 dbSNP
rs958364366 4052 dbSNP
rs1314058839 4054 dbSNP
rs925859103 4055 dbSNP
rs978707520 4063 dbSNP
rs562030573 4066 dbSNP
rs1216847555 4070 dbSNP
rs967222102 4072 dbSNP
rs538877105 4076 dbSNP
rs1020558765 4077 dbSNP
rs998047239 4078 dbSNP
rs1455615596 4085 dbSNP
rs777204114 4095 dbSNP
rs548660469 4098 dbSNP
rs1184016915 4101 dbSNP
rs1259503922 4104 dbSNP
rs1476578944 4107 dbSNP
rs1192340146 4111 dbSNP
rs1423664280 4112 dbSNP
rs1018321270 4119 dbSNP
rs764347987 4126 dbSNP
rs1006805877 4131 dbSNP
rs573053248 4146 dbSNP
rs1465843628 4147 dbSNP
rs888482651 4148 dbSNP
rs1277667717 4150 dbSNP
rs1341142637 4154 dbSNP
rs1043638309 4156 dbSNP
rs1189763338 4162 dbSNP
rs1299453660 4172 dbSNP
rs931628730 4178 dbSNP
rs530399427 4179 dbSNP
rs553274143 4184 dbSNP
rs1210524077 4195 dbSNP
rs114040335 4204 dbSNP
rs1208532800 4206 dbSNP
rs1487280897 4215 dbSNP
rs994850594 4226 dbSNP
rs773640579 4227 dbSNP
rs1270592107 4230 dbSNP
rs74656452 4232 dbSNP
rs148372811 4233 dbSNP
rs563040426 4240 dbSNP
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Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000311417.2 | 3UTR | UCAACAUUUUCUCAAGAAAAUUUUCAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000311417.2 | 3UTR | UCAACAUUUUCUCAAGAAAAUUUUCAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE19536 Breast cancer 0.252 5.7e-3 0.226 1.2e-2 100 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.489 6.6e-3 0.423 1.8e-2 25 Click to see details
GSE19783 ER- ER- breast cancer 0.193 4.4e-2 0.163 7.6e-2 79 Click to see details
GSE32688 Pancreatic cancer 0.268 6.9e-2 0.264 7.2e-2 32 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.22 1.5e-1 0.328 5.5e-2 25 Click to see details
GSE21032 Prostate cancer 0.116 1.5e-1 0.141 1.0e-1 83 Click to see details
GSE38226 Liver fibrosis -0.226 1.6e-1 -0.133 2.8e-1 21 Click to see details
GSE42095 Differentiated embryonic stem cells 0.205 1.7e-1 0.213 1.6e-1 23 Click to see details
GSE19350 CNS germ cell tumors -0.239 2.3e-1 -0.035 4.6e-1 12 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.246 2.8e-1 -0.286 2.5e-1 8 Click to see details
GSE28260 Renal cortex and medulla -0.153 3.1e-1 -0.269 1.9e-1 13 Click to see details
GSE26953 Aortic valvular endothelial cells 0.107 3.1e-1 0.194 1.8e-1 24 Click to see details
GSE28544 Breast cancer 0.087 3.4e-1 0.332 5.6e-2 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.074 3.8e-1 0.460 2.1e-2 20 Click to see details
GSE21687 Ependynoma primary tumors -0.021 4.3e-1 0.158 1.1e-1 64 Click to see details
GSE19783 ER+ ER+ breast cancer -0.018 4.7e-1 -0.027 4.6e-1 20 Click to see details
GSE17498 Multiple myeloma -0.002 5.0e-1 -0.004 4.9e-1 40 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
BLCA 0.864 0 0.619 0.05 8 Click to see details
LIHC 0.705 0.01 0.559 0.03 12 Click to see details
KIRP 0.611 0.02 0.762 0 12 Click to see details
ESCA 0.978 0.07 0.500