miRTarBase - #MIRT447066


—
pre-miRNA Information
pre-miRNA hsa-mir-3973   
Genomic Coordinates chr11: 36010098 - 36010204
Description Homo sapiens miR-3973 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3973
Sequence 84| ACAAAGUACAGCAUUAGCCUUAG |106
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs770990564 3 dbSNP
rs1265409247 6 dbSNP
rs776720932 7 dbSNP
rs1303596672 18 dbSNP
rs183016698 23 dbSNP
Putative Targets

Gene Information
Gene Symbol MCC   
Synonyms MCC1
Description mutated in colorectal cancers
Transcript NM_001085377   
Other Transcripts NM_002387   
Expression
Putative miRNA Targets on MCC
3'UTR of MCC
(miRNA target sites are highlighted)		 
>MCC|NM_001085377|3'UTR
   1 TCAGCACTCACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAGAAGGGCCCATGTACTTG
  81 TTGGGAGGAGGAGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCG
 161 ACTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACAT
 241 GTTCTGTGCCTGCTCAGCAGAGCCTCGTTTCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGC
 321 ATCAGTGGGATCCCAGACATTTGTTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTTCTA
 401 GAATCTCGTTTCTCCTCTTTCCTCCTGCTTCATGGGAAAACAGACCTGTGTGTGCCTCCAGCATTTAAAAGGACTGCTGA
 481 TTTGTTTACTACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTC
 561 TGGGAGTTATAGGTCATGGGAAGAGCGTAGACAGGTGTTACTTACAGTCCCAGATACACTAAAGTTACAAACAGACCACC
 641 ACCAGGACTGTGCCTGAACAATTTTGTATTGAGAGAATAAAAACTTCCTTCAATCTTCATTTTGGAGGCAGGGCTGGGAA
 721 GGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTCAGTGGAGCCTTATTAATATCCAAGACTTAGAGCTGGGAATCTTT
 801 TTGATACCTGTAGTGGAACTAAAATTCTGTCAGGGGTTTCTTCAAGAGCTGAGAAACATTATTAGCACTTCCCGCCCCAG
 881 GGCACTACATAATTGCTGTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGTCTCTACCTA
 961 AGGACAAGACACTGAGGAGATACTGAACATTTTGCAAAACTTATCACGCCTACTTAAGAGTGCTGTGTAACCCCCAGTTC
1041 AAGACTTAGCTCCTGTTGTCATGACGGGGACAGAGTGAGGGAATGGTAGTTAAGGCTTCTTTTTTGCCCCCAGATACATG
1121 GTGATGGTTAGCATATGGTGCTTAAAAGGTTAAATTTCAAGCAAAATGCTTACAGGGCTAGGCAGTACCAAAGTAACTGA
1201 ATTATTTCAGGAAGGTCTTCAATCTTAAAACAAATTCATTATTCTTTTTCAGTTTTACCTCTTCTCTCTCAGTTCTACAC
1281 TGATACACTTGAAGGACCATTTACTGTTTTTTTCTGTAGCACCAGAGAATCCATCCAAAGTTCCCTATGAAAAATGTGTT
1361 CCATTGCCATAGCTGACTACAAATTAAAGTTGAGGAGGTTTCTGCATAGAGTCTTTATGTCCATAAGCTACGGGTAGGTC
1441 TATTTTCAGAGCATGATACAAATTCCACAGCCTTCTGTTCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAG
1521 CTGTATCCTAAAAGCAACCACTGAGAGGCCAGCAGTGAGGCTGCCCATCTCCAAAACGAAACAACAGATCAACTGGTATC
1601 AGTCTAGAAGGACCAGCTTTGGGGTGCTTTGATCACTATGAAAATGTTCACTGGTTTCTGTCAATCATTTGGTCAAAGTT
1681 AGTTCCTGTGATTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCGTCACCAGGCTGAAGTGCAGTGGCGTGATCTTGG
1761 CTCACTGCAACCTCTGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCACCATACCCAGCTAGTTTTTTTGTATTTTTA
1841 GTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCACTGATCCACCCACCTCGGCCTCCCAAAG
1921 TGCTGGGATTACAGGCATGAGCCAATGTGCCTGGCCATTCCTGTGATTTTTTAGAATTTTTCACTTTTCATATAAAGTTG
2001 CATTTTATCATGAGGAAAATGTTTTGGCTGAAAAACATATGCCCCAAAAAAAAAAAAATCAGTTTTCACTATTTTTCCAG
2081 CTTGCCTAGGGAAACGTCCTCCCCTGAGCAAAGTGGGATGTGCATGGCTCTTTTTTGTGATTAAGCAGGCATCAAATGGG
2161 CAGTTTTCATTTTCACTGACACAGAAACATGTGGCTGAAGCAGGAATAAAATCCTGCCTACTGACTTCTGTCTCCATTCT
2241 TGCTCCAGGTAAAATCAGAGAACCTCCCCTTCTCTGAGAATTCCCCCAGGCAGAGGCGGCTCCAGCTCCTGTTAAGGGCC
2321 CCAGTTTTACTCATGCTACCTGACCTTAGTTTTAGTACTTTCAAATGTGATTTGGGTAAAAACTATTTTGCAGGCAAAAG
2401 TGTTAATTTTTTATAAATATGTATAATAAAAAAGCTATAAAAGTTTTTCCTTTTCTTGTATTTTTCAAATACTCCCCAAG
2481 ACACAATCCTTGAAGGTGAACTAGGTGGCACTTGATTATGCTAATTGTGGGAGCTACTGAACTAAACTATACTGATTAAA
2561 TTAAATGCTTGCAGGTTCCTGGGTAATTTTCCTTTGTGAATAACCTGGCGCTACCTGAATTTTTCTCTAACAAACATCTC
2641 CAATGAGGGTAAACAATGATCTTGATTCTAATTTATATGAGGTTAAAAACCTTCAGATTTCGTATTTTGAATTGTTCTCC
2721 CTAGTTTCCTCAGTGGTTACCCCCTTTTAGTCAGTAACCATCTCTGTTCAGAATTCAGTCTTTGGCTTTTGAAGAAATGG
2801 GCACAGAGCCAAAGGACCCATTTCACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAACTG
2881 TGCAAATCACAAGCAAAAGAGACTTCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTGTC
2961 ATGGACTGGGGAACAGTATGATTCCTTATTGAAACTTTCATCCTCATCGGCTGGCTTGTCAGCGTTCTGAAGTTAATATC
3041 CATGCTGCCTGAAACAAATGTTATGTTTAACTAGCACTTAACTTTTAAAATTGCTTAATTCTCCTTTCAGATGCATGCAC
3121 TAAGTCTTCTCTGAGCCTGCAGCAATATTTTAGAGGGACCTCTTCTAAGTCAGAGCCTTGACATTCTACTCCAAAAGGAA
3201 GTCCAAATTAGAGCCCATAGGCTTTTTCTTAAAAGCTGTTAAGGAGTAGTAAAGAAAGTTACCACTCTAAGGAAAACATG
3281 AAACTATCTGAAAGTCTTCTGGTTCCTAACTGGATACAGATTAGATTATTTTAAATGAGAAAAAAGTGCACCGTAGTTAC
3361 CCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGAATTAAAGAACCTCCATAGTTGCTTGTTCCCTTCTGAAGGTGTTT
3441 CCTATGGCCCACGAGAATTATAAAGCAATCACTTTTTAAGTCTATCAGTCAACCTTAATAGCTCTCAAGAGTTTCGATTA
3521 TCAAGCTTTAAAGTGATAACATATCAAGATGACTATTAAAAAATAAACATCTCTGAAAGTGTCCTTTCCTCCATAAGGCT
3601 TTAAACAATTTGCAAATTCTTAATTGGGAGTATGTCCCAATCATTCTATTAAACTATTTACAGCTCTACCTACTTCTAGA
3681 TTCAGCAAACAGAGCTACTAGTTAGAGTATTTTGAGAGCCAAAATAGTAAGAGACTTCTGTAATGGTTGAGATTTCTGCA
3761 CTGACCTTAATTAGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGCATAAGTAACATTTT
3841 TTTTCTGCAGAAGGTGATGGCTTTGTAGAACACTATAAAATTTTTCAGGAAAACATACAGCAAATTTTCTTATCCAGTGG
3921 GAACAGCCTATTTGACAAGGAATGATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGCGTA
4001 ACTGGTTACAAAACAAAAGTTACGCCTTCACTATCCAGTTCTTAAAGTTTATCCACATCCTACAAATCTTATGTTCATGT
4081 AGGTCAGGTTAAAGTAAGCTCCAAACTTGTGGCCTTCAGAAGCATCTCCTGTTTAACACACCTGAAATTACTCTAACTTA
4161 ATACATTTGTATTCTCTAAGAAATAATGCTGACTGCTGTCACCACAGCATCACTGATCTCTCAGTGGCTGTTAAAATATA
4241 AACAAGTGGAAAAAAAGTATACAAGTTGATAGCAGCTGTTCATGTATTCTTGTTTTGCTAATACCTGTGTAGAGAAAGAC
4321 AGTTTCACATGCAGATCACCATACATTTTTGCTTAAAGGTTACACTGGGTAAACTGTTTGTTTATCACATTACATCTGGG
4401 TGAGATTTTGCATGTGACCAAGAGGAAGAAATCATTCAGTCCCGGAAATAGCAACTGCTATGTAAAACCACATCCTTGAC
4481 TAGTACTTCATCTTTCCACAGTCATCCATCTGCTAATCAGGTGAAATATCAGCTCAGCAGAACAAAGCAAGTTATACACA
4561 AATTTCCCCCACATTCACACTGATGCCGTACTTAGTAATTCTGGTTCTACCATTCCCTTTTGCACTTTTTGCAAGTCAAA
4641 TTCATGTGGAAAAATGTTCTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAGTGAGTAAG
4721 AGCCCCTGATAATCTGCTTTTGTTAGAACGTAATGCAAAGATAATAAAACATGTCCACTTCTTTTCTAGTTCTAATCAGT
4801 TTTTAGACATCAAGATTTATTTACTTTGCATGAGATTTGTTTCCTATTATTTGAATATGTGCTATACACTTGAATTAGAA
4881 AAACCTGCTTGAATGTATTGTCAGTTATTAAAGCACATGTGACTAAGTTTGCATTTGTCAGTATTGTTCTACTGTTTGTA
4961 CTGAAAGTCTCATTTTAAAATTGCTACTTAACACTGTACTATACCTTGTAATTTTTTAGATTCTCCACTTGTATTCTTTA
5041 AATGTTTCCAGATGCCTTTAGTTTTAGCTGCTGTAAAATAGCTACTTTGCGTTATTTGATATAGAATTGTTTTTTAAAAA
5121 CTCCATTTATTTATACAGAGACATTTATAATATTTTACAAACATTCTTATATTCTGAATAAATATTTCTAATTCCACAGT
5201 GTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gauucCGA----UUA-CGACAUGAAACa 5'
               |||    ||| ||  ||||||| 
Target 5' tagctGCTGTAAAATAGC--TACTTTGc 3'
 5065 - 5090 148.00 -9.40
2 
miRNA  3' gaUUCCGAUUA-CGA---CAUGAAACa 5'
            |: |||| | |:|   |||:|||| 
Target 5' acAGAGCTACTAGTTAGAGTATTTTGa 3'
 3689 - 3715 145.00 -9.00
3 
miRNA  3' gaUUCC-GAUU---ACGACAUGAAACa 5'
            |||| | |:   ||  ||:||||| 
Target 5' agAAGGACCAGCTTTGGGGTGCTTTGa 3'
 1606 - 1632 141.00 -14.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30527591 3 COSMIC
COSN26561735 16 COSMIC
COSN31560616 26 COSMIC
COSN31494921 56 COSMIC
COSN30126878 98 COSMIC
COSN30528876 115 COSMIC
COSN30134820 118 COSMIC
COSN30168625 202 COSMIC
COSN22473859 212 COSMIC
COSN32189759 278 COSMIC
COSN26925934 1392 COSMIC
COSN32002334 1406 COSMIC
COSN6856638 1453 COSMIC
COSN9398901 1497 COSMIC
COSN32062445 1551 COSMIC
COSN20101685 1726 COSMIC
COSN26740479 1846 COSMIC
COSN21563743 1853 COSMIC
COSN20101682 2045 COSMIC
COSN2060753 2214 COSMIC
COSN20101670 2274 COSMIC
COSN20101658 2277 COSMIC
COSN20101652 2278 COSMIC
COSN7856660 2347 COSMIC
COSN20101640 2540 COSMIC
COSN23064097 2544 COSMIC
COSN27430300 2643 COSMIC
COSN29235324 2805 COSMIC
COSN2060751 2847 COSMIC
COSN23987226 2882 COSMIC
COSN14789646 2920 COSMIC
COSN7856659 3075 COSMIC
COSN27166886 3114 COSMIC
COSN20101630 3251 COSMIC
COSN14728354 4109 COSMIC
COSN20091231 4132 COSMIC
COSN14794643 4506 COSMIC
COSN17181779 4520 COSMIC
COSN8200499 4650 COSMIC
COSN22680406 4867 COSMIC
COSN31550517 4893 COSMIC
COSN14848862 5077 COSMIC
COSN6856636 5090 COSMIC
COSN31602556 5091 COSMIC
COSN2060749 5126 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1355827889 9 dbSNP
rs374300739 11 dbSNP
rs760248955 12 dbSNP
rs772700868 15 dbSNP
rs191547853 16 dbSNP
rs114398986 17 dbSNP
rs768855796 19 dbSNP
rs563505347 20 dbSNP
rs1379659117 23 dbSNP
rs749813767 24 dbSNP
rs776072065 25 dbSNP
rs1331684168 26 dbSNP
rs770420208 30 dbSNP
rs560311640 33 dbSNP
rs1381615719 37 dbSNP
rs545439760 43 dbSNP
rs757536491 45 dbSNP
rs913240145 51 dbSNP
rs930623818 52 dbSNP
rs771670008 53 dbSNP
rs1358957744 58 dbSNP
rs578045144 61 dbSNP
rs1466825871 63 dbSNP
rs1384517055 68 dbSNP
rs936285572 69 dbSNP
rs745476726 70 dbSNP
rs980736763 72 dbSNP
rs1446296947 74 dbSNP
rs59624235 80 dbSNP
rs917388677 81 dbSNP
rs1174622782 86 dbSNP
rs940961699 89 dbSNP
rs1235198277 95 dbSNP
rs1457089895 96 dbSNP
rs1467768881 96 dbSNP
rs1198883446 98 dbSNP
rs543823880 100 dbSNP
rs1487183759 102 dbSNP
rs1181503856 103 dbSNP
rs544667413 108 dbSNP
rs576202033 109 dbSNP
rs756420974 111 dbSNP
rs1421918469 115 dbSNP
rs554738445 116 dbSNP
rs536188909 119 dbSNP
rs565945171 123 dbSNP
rs1292985131 124 dbSNP
rs1018211887 127 dbSNP
rs977701414 132 dbSNP
rs1276146511 137 dbSNP
rs1007192746 138 dbSNP
rs1317005226 139 dbSNP
rs1345257048 142 dbSNP
rs890968937 151 dbSNP
rs1319434985 152 dbSNP
rs573969591 153 dbSNP
rs1246757951 158 dbSNP
rs1549181 159 dbSNP
rs891873668 160 dbSNP
rs1261486558 168 dbSNP
rs543906522 169 dbSNP
rs761873600 172 dbSNP
rs751032387 176 dbSNP
rs1451807848 177 dbSNP
rs1426095658 178 dbSNP
rs1054894414 186 dbSNP
rs187094324 198 dbSNP
rs549469104 201 dbSNP
rs1459380946 202 dbSNP
rs531303878 203 dbSNP
rs1296201290 210 dbSNP
rs1036369215 212 dbSNP
rs950309057 215 dbSNP
rs1400343050 224 dbSNP
rs1452104667 226 dbSNP
rs567804498 227 dbSNP
rs549531811 228 dbSNP
rs983610116 229 dbSNP
rs1159857447 239 dbSNP
rs1225396078 241 dbSNP
rs373458481 241 dbSNP
rs890704547 246 dbSNP
rs1488231647 247 dbSNP
rs1194906687 251 dbSNP
rs1382907709 261 dbSNP
rs73235120 266 dbSNP
rs1442455161 267 dbSNP
rs560855123 270 dbSNP
rs1361617451 280 dbSNP
rs1260617315 286 dbSNP
rs1414640431 289 dbSNP
rs932113454 291 dbSNP
rs1156815396 292 dbSNP
rs545676740 294 dbSNP
rs974204453 295 dbSNP
rs766537499 296 dbSNP
rs962421039 301 dbSNP
rs1018325321 303 dbSNP
rs1006813028 312 dbSNP
rs540428973 313 dbSNP
rs1418121509 317 dbSNP
rs1353691061 319 dbSNP
rs139385104 320 dbSNP
rs967044401 323 dbSNP
rs1010011397 324 dbSNP
rs1209705679 325 dbSNP
rs992723404 336 dbSNP
rs1446642125 338 dbSNP
rs1380743300 343 dbSNP
rs1362895322 347 dbSNP
rs1299164815 348 dbSNP
rs544756921 349 dbSNP
rs1379755074 350 dbSNP
rs1182521655 360 dbSNP
rs1424371561 362 dbSNP
rs574062403 367 dbSNP
rs554498148 368 dbSNP
rs1033110269 370 dbSNP
rs1440314861 372 dbSNP
rs958505877 373 dbSNP
rs1034196999 376 dbSNP
rs1413659766 378 dbSNP
rs1334529163 387 dbSNP
rs1407906945 388 dbSNP
rs1444104161 389 dbSNP
rs765150850 392 dbSNP
rs146718609 398 dbSNP
rs1190660377 399 dbSNP
rs1015458275 400 dbSNP
rs1044789123 401 dbSNP
rs950312578 404 dbSNP
rs1004874916 406 dbSNP
rs373708488 407 dbSNP
rs890477847 408 dbSNP
rs1051986665 409 dbSNP
rs1221493730 414 dbSNP
rs1047946180 419 dbSNP
rs929476441 421 dbSNP
rs920733931 422 dbSNP
rs1431149397 424 dbSNP
rs1210350289 430 dbSNP
rs1463737062 432 dbSNP
rs1169439855 433 dbSNP
rs1400414972 434 dbSNP
rs900627674 441 dbSNP
rs973858857 441 dbSNP
rs183315369 443 dbSNP
rs1436376555 445 dbSNP
rs142508692 448 dbSNP
rs1326017784 453 dbSNP
rs925711657 461 dbSNP
rs910931040 469 dbSNP
rs1269642616 470 dbSNP
rs1197678409 473 dbSNP
rs1217091025 476 dbSNP
rs1342636758 479 dbSNP
rs1265340106 488 dbSNP
rs1451031631 489 dbSNP
rs1199400471 491 dbSNP
rs1270792772 492 dbSNP
rs776639507 493 dbSNP
rs985523468 500 dbSNP
rs1476687838 503 dbSNP
rs1041883711 513 dbSNP
rs539948346 517 dbSNP
rs111428696 518 dbSNP
rs1326181071 535 dbSNP
rs988665314 535 dbSNP
rs555731884 537 dbSNP
rs916929788 541 dbSNP
rs955880406 542 dbSNP
rs1304223347 543 dbSNP
rs1347806149 544 dbSNP
rs1033218835 546 dbSNP
rs537579166 550 dbSNP
rs1229876952 556 dbSNP
rs779666265 556 dbSNP
rs958618441 558 dbSNP
rs567375178 570 dbSNP
rs1165627965 581 dbSNP
rs1000324816 586 dbSNP
rs763967093 587 dbSNP
rs577669497 588 dbSNP
rs927242570 590 dbSNP
rs1487248020 594 dbSNP
rs1022992224 595 dbSNP
rs973255061 596 dbSNP
rs1430003935 598 dbSNP
rs1248242025 601 dbSNP
rs1235797303 602 dbSNP
rs963573357 605 dbSNP
rs138486620 607 dbSNP
rs775019290 615 dbSNP
rs1418394004 617 dbSNP
rs1270741863 618 dbSNP
rs1384145672 621 dbSNP
rs1310783409 624 dbSNP
rs1339974499 628 dbSNP
rs1030339390 632 dbSNP
rs575692230 635 dbSNP
rs1488560263 642 dbSNP
rs771547056 643 dbSNP
rs1351500635 646 dbSNP
rs899335186 652 dbSNP
rs1038275343 654 dbSNP
rs1054473179 658 dbSNP
rs1486691885 669 dbSNP
rs1285106388 671 dbSNP
rs534413522 673 dbSNP
rs1442610118 675 dbSNP
rs566901467 684 dbSNP
rs1438386686 685 dbSNP
rs1158508981 686 dbSNP
rs1276940262 686 dbSNP
rs143686750 689 dbSNP
rs773870592 693 dbSNP
rs769496739 695 dbSNP
rs1301425655 704 dbSNP
rs111951127 705 dbSNP
rs1401823391 708 dbSNP
rs111689450 709 dbSNP
rs1338864325 714 dbSNP
rs148955456 717 dbSNP
rs770207599 726 dbSNP
rs1032879245 727 dbSNP
rs557357367 729 dbSNP
rs1255182236 735 dbSNP
rs1323898299 739 dbSNP
rs114298262 741 dbSNP
rs1469403610 747 dbSNP
rs1235843258 748 dbSNP
rs1456891529 750 dbSNP
rs535872024 750 dbSNP
rs973753194 758 dbSNP
rs941844103 760 dbSNP
rs755951949 762 dbSNP
rs1180369769 763 dbSNP
rs1023487374 768 dbSNP
rs567527163 769 dbSNP
rs1470429620 771 dbSNP
rs1178787166 774 dbSNP
rs529244825 777 dbSNP
rs1203319979 786 dbSNP
rs960038257 792 dbSNP
rs1310639515 807 dbSNP
rs954774001 808 dbSNP
rs1375508823 810 dbSNP
rs191460220 812 dbSNP
rs1323917322 816 dbSNP
rs1214120540 827 dbSNP
rs1220204905 828 dbSNP
rs1255714661 829 dbSNP
rs1030452225 834 dbSNP
rs1316886869 834 dbSNP
rs974727119 840 dbSNP
rs1026281665 843 dbSNP
rs1481947894 851 dbSNP
rs1189921550 852 dbSNP
rs965095469 854 dbSNP
rs1480942064 857 dbSNP
rs748413988 862 dbSNP
rs200207969 863 dbSNP
rs1335470179 864 dbSNP
rs1465279382 867 dbSNP
rs1171305574 868 dbSNP
rs1445113229 871 dbSNP
rs899407360 873 dbSNP
rs1360571945 874 dbSNP
rs1032574018 879 dbSNP
rs1345943119 888 dbSNP
rs1406585215 888 dbSNP
rs56265422 889 dbSNP
rs1399909769 891 dbSNP
rs902648759 896 dbSNP
rs1021083324 898 dbSNP
rs1378237567 901 dbSNP
rs1160452527 906 dbSNP
rs1490647943 907 dbSNP
rs1225248454 912 dbSNP
rs1261464236 920 dbSNP
rs1440201816 921 dbSNP
rs1008123262 924 dbSNP
rs889267591 925 dbSNP
rs1422090411 937 dbSNP
rs188668672 940 dbSNP
rs1049482896 944 dbSNP
rs933701379 952 dbSNP
rs895561600 954 dbSNP
rs1482293056 956 dbSNP
rs1426457158 957 dbSNP
rs1239434208 962 dbSNP
rs1056839304 963 dbSNP
rs1359590589 971 dbSNP
rs572211336 974 dbSNP
rs922310914 980 dbSNP
rs559915062 989 dbSNP
rs1227282627 992 dbSNP
rs1052711288 994 dbSNP
rs1211012143 995 dbSNP
rs1315110740 1000 dbSNP
rs747499012 1001 dbSNP
rs1037588504 1004 dbSNP
rs941944707 1007 dbSNP
rs907831028 1008 dbSNP
rs1216813654 1019 dbSNP
rs1244094346 1021 dbSNP
rs780342456 1025 dbSNP
rs149781700 1027 dbSNP
rs978675996 1029 dbSNP
rs1446378173 1032 dbSNP
rs1156707365 1042 dbSNP
rs975249113 1045 dbSNP
rs964715176 1050 dbSNP
rs970307783 1052 dbSNP
rs915710322 1055 dbSNP
rs1380634210 1061 dbSNP
rs992916043 1065 dbSNP
rs1357117290 1066 dbSNP
rs1032766056 1068 dbSNP
rs56023848 1070 dbSNP
rs1384289709 1072 dbSNP
rs1429587724 1076 dbSNP
rs967363724 1076 dbSNP
rs114675063 1079 dbSNP
rs993486394 1080 dbSNP
rs1224730951 1096 dbSNP
rs1286761307 1099 dbSNP
rs1420032897 1114 dbSNP
rs1353729640 1116 dbSNP
rs1203194051 1120 dbSNP
rs62364375 1124 dbSNP
rs771375261 1125 dbSNP
rs1016946715 1127 dbSNP
rs1462673169 1133 dbSNP
rs1176739622 1136 dbSNP
rs1232276409 1137 dbSNP
rs1007782297 1149 dbSNP
rs140383800 1153 dbSNP
rs1160144267 1160 dbSNP
rs896683835 1167 dbSNP
rs555440673 1168 dbSNP
rs1176640709 1174 dbSNP
rs1407698661 1176 dbSNP
rs1182726136 1183 dbSNP
rs757094390 1185 dbSNP
rs557579490 1193 dbSNP
rs1035380267 1197 dbSNP
rs533647121 1203 dbSNP
rs1443555368 1217 dbSNP
rs1281641283 1224 dbSNP
rs567109531 1229 dbSNP
rs1223160487 1230 dbSNP
rs1263951603 1230 dbSNP
rs372256537 1235 dbSNP
rs1037771538 1236 dbSNP
rs900917835 1237 dbSNP
rs1196883988 1241 dbSNP
rs3756600 1242 dbSNP
rs1488784233 1247 dbSNP
rs146748143 1249 dbSNP
rs751690748 1250 dbSNP
rs886341501 1251 dbSNP
rs934336808 1252 dbSNP
rs569593944 1259 dbSNP
rs923114632 1264 dbSNP
rs113613658 1266 dbSNP
rs1166876787 1271 dbSNP
rs1312768148 1277 dbSNP
rs1411025574 1282 dbSNP
rs1331407269 1284 dbSNP
rs1013641325 1285 dbSNP
rs114240668 1286 dbSNP
rs1284305474 1290 dbSNP
rs1347684311 1297 dbSNP
rs772040300 1306 dbSNP
rs925431786 1311 dbSNP
rs1197514924 1314 dbSNP
rs1287689879 1314 dbSNP
rs992655279 1317 dbSNP
rs1223018521 1319 dbSNP
rs960142368 1322 dbSNP
rs1344569418 1325 dbSNP
rs775391917 1329 dbSNP
rs919323554 1343 dbSNP
rs1291772284 1344 dbSNP
rs972151323 1345 dbSNP
rs1476636687 1346 dbSNP
rs1191950102 1348 dbSNP
rs1373175008 1351 dbSNP
rs183668467 1352 dbSNP
rs1016233682 1355 dbSNP
rs1383980432 1361 dbSNP
rs986826470 1363 dbSNP
rs914138752 1364 dbSNP
rs992390104 1368 dbSNP
rs1380760564 1371 dbSNP
rs1317852954 1384 dbSNP
rs1465136842 1401 dbSNP
rs1327216329 1403 dbSNP
rs953646413 1404 dbSNP
rs75306304 1406 dbSNP
rs1358720049 1408 dbSNP
rs758789001 1409 dbSNP
rs758902710 1411 dbSNP
rs1196043767 1415 dbSNP
rs529297975 1416 dbSNP
rs1204220454 1418 dbSNP
rs1002414567 1421 dbSNP
rs1262047407 1421 dbSNP
rs1184856725 1423 dbSNP
rs1384070386 1428 dbSNP
rs192251239 1431 dbSNP
rs892609707 1432 dbSNP
rs1016042341 1440 dbSNP
rs1387498816 1448 dbSNP
rs1031393905 1452 dbSNP
rs1158328570 1457 dbSNP
rs774076405 1460 dbSNP
rs1384126160 1464 dbSNP
rs904188891 1467 dbSNP
rs1382048757 1469 dbSNP
rs1453313317 1472 dbSNP
rs534502209 1475 dbSNP
rs199923127 1479 dbSNP
rs528570968 1480 dbSNP
rs559951779 1481 dbSNP
rs1269772250 1485 dbSNP
rs770451884 1487 dbSNP
rs544785152 1489 dbSNP
rs1352481239 1490 dbSNP
rs1047648326 1492 dbSNP
rs1057014067 1494 dbSNP
rs1322629649 1499 dbSNP
rs376882957 1503 dbSNP
rs901639415 1505 dbSNP
rs562450023 1507 dbSNP
rs1039279562 1508 dbSNP
rs1405475792 1509 dbSNP
rs186443925 1513 dbSNP
rs943253475 1516 dbSNP
rs1297472769 1518 dbSNP
rs1371173332 1538 dbSNP
rs972566594 1539 dbSNP
rs1390749233 1542 dbSNP
rs1307446240 1555 dbSNP
rs1337251014 1556 dbSNP
rs1398460997 1563 dbSNP
rs1221329162 1564 dbSNP
rs573625144 1565 dbSNP
rs909237669 1572 dbSNP
rs1173179928 1577 dbSNP
rs555058055 1578 dbSNP
rs953653619 1582 dbSNP
rs1030556565 1584 dbSNP
rs976274329 1596 dbSNP
rs1197677514 1598 dbSNP
rs1428920980 1609 dbSNP
rs1480880813 1610 dbSNP
rs1178764422 1611 dbSNP
rs748940682 1615 dbSNP
rs777187397 1616 dbSNP
rs1031128640 1620 dbSNP
rs999052318 1624 dbSNP
rs180784494 1629 dbSNP
rs1021739804 1631 dbSNP
rs1282382079 1636 dbSNP
rs1456108836 1637 dbSNP
rs1224897303 1638 dbSNP
rs1239460265 1639 dbSNP
rs1198924966 1649 dbSNP
rs1204473522 1664 dbSNP
rs1343885872 1666 dbSNP
rs6869100 1668 dbSNP
rs557859355 1672 dbSNP
rs1484311195 1675 dbSNP
rs1220798052 1678 dbSNP
rs1268626175 1683 dbSNP
rs778979968 1684 dbSNP
rs548747305 1685 dbSNP
rs78255454 1685 dbSNP
rs962931578 1688 dbSNP
rs938546880 1691 dbSNP
rs1306274367 1692 dbSNP
rs58750504 1692 dbSNP
rs897665882 1693 dbSNP
rs1036189371 1695 dbSNP
rs1281567587 1710 dbSNP
rs1286713096 1710 dbSNP
rs1297085315 1710 dbSNP
rs1360796632 1710 dbSNP
rs1365900532 1710 dbSNP
rs1404985318 1710 dbSNP
rs1406412186 1710 dbSNP
rs35690462 1710 dbSNP
rs563628023 1710 dbSNP
rs9326871 1710 dbSNP
rs1187251069 1711 dbSNP
rs1235540065 1711 dbSNP
rs569433530 1715 dbSNP
rs999891893 1717 dbSNP
rs1174073237 1721 dbSNP
rs1406740126 1722 dbSNP
rs1442711797 1723 dbSNP
rs1331694419 1726 dbSNP
rs33949689 1726 dbSNP
rs10660020 1727 dbSNP
rs1426358381 1727 dbSNP
rs1333423373 1729 dbSNP
rs201055332 1729 dbSNP
rs375443387 1729 dbSNP
rs1447544521 1730 dbSNP
rs1431009899 1733 dbSNP
rs1290121600 1734 dbSNP
rs1401802454 1738 dbSNP
rs942138392 1742 dbSNP
rs909279555 1749 dbSNP
rs1360759617 1750 dbSNP
rs1301247811 1751 dbSNP
rs1316557020 1751 dbSNP
rs557637826 1753 dbSNP
rs986596914 1760 dbSNP
rs1378557777 1761 dbSNP
rs1158639318 1766 dbSNP
rs1473730450 1769 dbSNP
rs1175333399 1772 dbSNP
rs1406892291 1774 dbSNP
rs931995186 1781 dbSNP
rs1160868570 1782 dbSNP
rs535774136 1783 dbSNP
rs923239237 1790 dbSNP
rs1438347839 1806 dbSNP
rs755292364 1807 dbSNP
rs1262340225 1810 dbSNP
rs1468873458 1810 dbSNP
rs1178753649 1814 dbSNP
rs1441273188 1822 dbSNP
rs1016402487 1824 dbSNP
rs956949007 1833 dbSNP
rs1253663494 1834 dbSNP
rs1224573688 1839 dbSNP
rs1201805903 1844 dbSNP
rs1270296339 1850 dbSNP
rs1321644255 1857 dbSNP
rs950330532 1862 dbSNP
rs1025990084 1876 dbSNP
rs924139790 1879 dbSNP
rs7709534 1880 dbSNP
rs1184047674 1881 dbSNP
rs901755592 1885 dbSNP
rs1479900241 1886 dbSNP
rs1176523565 1887 dbSNP
rs1403643572 1893 dbSNP
rs1038979830 1899 dbSNP
rs1327387140 1903 dbSNP
rs528864584 1904 dbSNP
rs1443445279 1905 dbSNP
rs1290584608 1907 dbSNP
rs1343945907 1908 dbSNP
rs1223065475 1909 dbSNP
rs546665030 1912 dbSNP
rs1309835553 1916 dbSNP
rs1347155773 1926 dbSNP
rs1212771324 1930 dbSNP
rs903703741 1935 dbSNP
rs1490795892 1936 dbSNP
rs1021395355 1938 dbSNP
rs1247062777 1943 dbSNP
rs781157838 1945 dbSNP
rs1490087350 1951 dbSNP
rs1044173249 1952 dbSNP
rs945465921 1955 dbSNP
rs528592883 1967 dbSNP
rs1166783423 1973 dbSNP
rs574641158 1973 dbSNP
rs143503170 1974 dbSNP
rs1310245452 1975 dbSNP
rs189775839 1976 dbSNP
rs1035318002 1983 dbSNP
rs981063350 1988 dbSNP
rs139897552 1991 dbSNP
rs1324404075 1992 dbSNP
rs941495146 2000 dbSNP
rs1403403178 2006 dbSNP
rs1333023269 2007 dbSNP
rs772210618 2011 dbSNP
rs1340070223 2013 dbSNP
rs1036627225 2018 dbSNP
rs1230443974 2022 dbSNP
rs1297944472 2026 dbSNP
rs1418212875 2028 dbSNP
rs1363015122 2033 dbSNP
rs1159723576 2036 dbSNP
rs1289347366 2037 dbSNP
rs1358408772 2040 dbSNP
rs1472214368 2041 dbSNP
rs200300581 2045 dbSNP
rs1026105264 2046 dbSNP
rs115778203 2046 dbSNP
rs1444910384 2046 dbSNP
rs199940390 2046 dbSNP
rs562337055 2047 dbSNP
rs1006069433 2052 dbSNP
rs1380743457 2052 dbSNP
rs1424008732 2058 dbSNP
rs11376495 2059 dbSNP
rs1365957732 2059 dbSNP
rs1437222736 2059 dbSNP
rs1261959025 2060 dbSNP
rs369757814 2068 dbSNP
rs1489109748 2069 dbSNP
rs1007489766 2070 dbSNP
rs1209151524 2073 dbSNP
rs1181182020 2074 dbSNP
rs1241888976 2074 dbSNP
rs1444552367 2086 dbSNP
rs540966129 2088 dbSNP
rs1370500047 2089 dbSNP
rs1451921340 2090 dbSNP
rs1263721528 2091 dbSNP
rs932027992 2094 dbSNP
rs923312968 2095 dbSNP
rs544535712 2096 dbSNP
rs935615041 2097 dbSNP
rs924199605 2101 dbSNP
rs1342762652 2114 dbSNP
rs980069215 2125 dbSNP
rs185360528 2127 dbSNP
rs1388013712 2132 dbSNP
rs1164520605 2134 dbSNP
rs939330161 2135 dbSNP
rs1457932257 2137 dbSNP
rs916703619 2148 dbSNP
rs1422477139 2150 dbSNP
rs1201474990 2160 dbSNP
rs757204291 2163 dbSNP
rs991241431 2166 dbSNP
rs1417741811 2176 dbSNP
rs905204030 2176 dbSNP
rs1413049572 2178 dbSNP
rs1045688604 2179 dbSNP
rs1174374622 2182 dbSNP
rs375474130 2183 dbSNP
rs76957295 2184 dbSNP
rs539869171 2185 dbSNP
rs1304477821 2186 dbSNP
rs910166693 2186 dbSNP
rs1035382824 2187 dbSNP
rs1190979663 2188 dbSNP
rs1308399645 2191 dbSNP
rs1478713832 2196 dbSNP
rs982942820 2199 dbSNP
rs1282109258 2207 dbSNP
rs1312217326 2208 dbSNP
rs1234739831 2209 dbSNP
rs1258336093 2212 dbSNP
rs1263619902 2213 dbSNP
rs1002520284 2216 dbSNP
rs1204979618 2219 dbSNP
rs1252907063 2220 dbSNP
rs930159945 2228 dbSNP
rs1197476834 2229 dbSNP
rs1198122338 2230 dbSNP
rs1433886877 2236 dbSNP
rs961989566 2238 dbSNP
rs369144346 2239 dbSNP
rs1014854136 2242 dbSNP
rs975848366 2243 dbSNP
rs1168996553 2246 dbSNP
rs1372118443 2248 dbSNP
rs1402749128 2261 dbSNP
rs1302188926 2263 dbSNP
rs572844177 2269 dbSNP
rs145215519 2274 dbSNP
rs374936208 2274 dbSNP
rs140147472 2275 dbSNP
rs199899367 2275 dbSNP
rs760883841 2275 dbSNP
rs1051237101 2276 dbSNP
rs1292816792 2276 dbSNP
rs142377451 2277 dbSNP
rs149263981 2277 dbSNP
rs201853765 2278 dbSNP
rs376936622 2278 dbSNP
rs142710577 2279 dbSNP
rs796393230 2279 dbSNP
rs1193062121 2281 dbSNP
rs1320496771 2281 dbSNP
rs1271114907 2283 dbSNP
rs1427866144 2287 dbSNP
rs557897821 2288 dbSNP
rs1017280009 2294 dbSNP
rs1422565712 2297 dbSNP
rs1006516416 2298 dbSNP
rs1350174404 2310 dbSNP
rs887619725 2314 dbSNP
rs1459061201 2322 dbSNP
rs1326032994 2323 dbSNP
rs1441019040 2324 dbSNP
rs1360601415 2325 dbSNP
rs986239218 2327 dbSNP
rs967982099 2330 dbSNP
rs1367946605 2332 dbSNP
rs76332106 2333 dbSNP
rs751460151 2344 dbSNP
rs1168175612 2345 dbSNP
rs1009337814 2347 dbSNP
rs1259067362 2349 dbSNP
rs764162806 2349 dbSNP
rs1464530737 2365 dbSNP
rs575957145 2367 dbSNP
rs1189267769 2373 dbSNP
rs1040377366 2375 dbSNP
rs935353083 2385 dbSNP
rs1171802371 2386 dbSNP
rs1181072185 2386 dbSNP
rs1425210569 2388 dbSNP
rs1476894300 2393 dbSNP
rs1344207927 2396 dbSNP
rs745882392 2404 dbSNP
rs1321960115 2409 dbSNP
rs558273155 2413 dbSNP
rs779223124 2415 dbSNP
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rs1283989863 2423 dbSNP
rs1237612204 2424 dbSNP
rs1305188315 2431 dbSNP
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rs757457928 2432 dbSNP
rs1197039705 2434 dbSNP
rs1209511225 2434 dbSNP
rs1209274522 2437 dbSNP
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rs557265998 2438 dbSNP
rs1473678183 2440 dbSNP
rs545300880 2440 dbSNP
rs1410843640 2443 dbSNP
rs1045071917 2444 dbSNP
rs1160751228 2445 dbSNP
rs1006002530 2449 dbSNP
rs888693327 2450 dbSNP
rs781373486 2458 dbSNP
rs1277176642 2466 dbSNP
rs1235661012 2467 dbSNP
rs1375564370 2468 dbSNP
rs536183054 2469 dbSNP
rs1350103154 2472 dbSNP
rs1229182130 2473 dbSNP
rs1168529686 2477 dbSNP
rs1481359482 2479 dbSNP
rs1290315382 2480 dbSNP
rs1448283968 2486 dbSNP
rs1218688938 2490 dbSNP
rs1279307089 2497 dbSNP
rs1444052636 2502 dbSNP
rs946921426 2511 dbSNP
rs1202268266 2514 dbSNP
rs1250716030 2520 dbSNP
rs1354782864 2521 dbSNP
rs1333027577 2525 dbSNP
rs916796010 2527 dbSNP
rs1047370679 2528 dbSNP
rs1427009092 2531 dbSNP
rs1173133874 2535 dbSNP
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rs112171584 2544 dbSNP
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rs201329998 2545 dbSNP
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rs1176890102 2549 dbSNP
rs200492846 2549 dbSNP
rs3068875 2550 dbSNP
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rs5870521 2550 dbSNP
rs796117651 2550 dbSNP
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rs568639932 2554 dbSNP
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rs1441113488 2558 dbSNP
rs937095263 2565 dbSNP
rs1040114043 2566 dbSNP
rs944475301 2567 dbSNP
rs1266398562 2575 dbSNP
rs1450676352 2576 dbSNP
rs1353644382 2582 dbSNP
rs1247886120 2583 dbSNP
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rs1479301679 2592 dbSNP
rs1307653990 2598 dbSNP
rs981157782 2599 dbSNP
rs910326770 2605 dbSNP
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rs1014964311 2610 dbSNP
rs1324298547 2612 dbSNP
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rs1283309692 2616 dbSNP
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rs1365814266 2628 dbSNP
rs1230416864 2629 dbSNP
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rs1028812700 2636 dbSNP
rs1003824674 2637 dbSNP
rs1034816841 2637 dbSNP
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rs1207530066 2643 dbSNP
rs552296609 2646 dbSNP
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rs1024170739 2652 dbSNP
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rs1418823603 2657 dbSNP
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rs1358556284 2674 dbSNP
rs1487317780 2676 dbSNP
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rs1402581190 2682 dbSNP
rs999987037 2687 dbSNP
rs1319964179 2689 dbSNP
rs1181539491 2690 dbSNP
rs1471918130 2691 dbSNP
rs1310336864 2695 dbSNP
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rs902516391 2697 dbSNP
rs1044116408 2702 dbSNP
rs1285643321 2704 dbSNP
rs947024200 2712 dbSNP
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rs575780955 2715 dbSNP
rs569068346 2719 dbSNP
rs550479849 2721 dbSNP
rs939511381 2722 dbSNP
rs901303986 2726 dbSNP
rs1442249410 2727 dbSNP
rs1317032479 2728 dbSNP
rs1188657269 2733 dbSNP
rs1041207786 2735 dbSNP
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rs1226074230 2740 dbSNP
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rs1293459516 2742 dbSNP
rs529055753 2743 dbSNP
rs1338129508 2749 dbSNP
rs1300029679 2755 dbSNP
rs1454217317 2757 dbSNP
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rs1396447806 2766 dbSNP
rs767299807 2771 dbSNP
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rs910281885 2784 dbSNP
rs1230399915 2786 dbSNP
rs1254815071 2787 dbSNP
rs1344913574 2788 dbSNP
rs1420297870 2788 dbSNP
rs1165851460 2791 dbSNP
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rs1261444576 2799 dbSNP
rs1050615943 2802 dbSNP
rs1482208080 2803 dbSNP
rs1196532236 2807 dbSNP
rs1181680926 2810 dbSNP
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rs1252769980 2817 dbSNP
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rs749450608 2824 dbSNP
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rs866533876 2841 dbSNP
rs987978736 2844 dbSNP
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rs1322942241 2856 dbSNP
rs751071987 2861 dbSNP
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rs765889325 2865 dbSNP
rs1217626777 2871 dbSNP
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rs762749906 2877 dbSNP
rs1189551750 2879 dbSNP
rs528097364 2883 dbSNP
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rs1428930073 2898 dbSNP
rs1168979350 2899 dbSNP
rs1372098910 2899 dbSNP
rs965858803 2900 dbSNP
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rs1366858947 2902 dbSNP
rs542234037 2908 dbSNP
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rs1326878107 2935 dbSNP
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rs6862944 2955 dbSNP
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rs1163682500 2967 dbSNP
rs761059777 2971 dbSNP
rs1189972545 2972 dbSNP
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rs1469469801 2980 dbSNP
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rs1055390257 2989 dbSNP
rs946471731 2996 dbSNP
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rs1364484030 3006 dbSNP
rs1226923653 3008 dbSNP
rs893596144 3009 dbSNP
rs1322490855 3011 dbSNP
rs1197673398 3012 dbSNP
rs1456183486 3016 dbSNP
rs1266306616 3017 dbSNP
rs1464429492 3020 dbSNP
rs1052041805 3024 dbSNP
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rs1259544018 3036 dbSNP
rs1414075596 3036 dbSNP
rs1227891298 3037 dbSNP
rs1475981799 3039 dbSNP
rs1003756276 3043 dbSNP
rs575398054 3045 dbSNP
rs1410553839 3048 dbSNP
rs1037597900 3051 dbSNP
rs1321841935 3058 dbSNP
rs1347411810 3064 dbSNP
rs940479151 3065 dbSNP
rs927866961 3068 dbSNP
rs1380249940 3074 dbSNP
rs1220846417 3080 dbSNP
rs770713169 3081 dbSNP
rs947887257 3084 dbSNP
rs142423199 3085 dbSNP
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rs1286279941 3101 dbSNP
rs1310299300 3101 dbSNP
rs1398387031 3102 dbSNP
rs907599672 3108 dbSNP
rs566667188 3110 dbSNP
rs1179530830 3113 dbSNP
rs1250560019 3114 dbSNP
rs181386406 3115 dbSNP
rs1159735707 3116 dbSNP
rs952772711 3126 dbSNP
rs1358944857 3127 dbSNP
rs921567126 3127 dbSNP
rs1376416929 3131 dbSNP
rs1174619600 3139 dbSNP
rs974636481 3143 dbSNP
rs1025761087 3145 dbSNP
rs1410522469 3151 dbSNP
rs139816413 3153 dbSNP
rs542081491 3156 dbSNP
rs1279114267 3157 dbSNP
rs1349825023 3161 dbSNP
rs1202699108 3162 dbSNP
rs1273480743 3165 dbSNP
rs965934086 3169 dbSNP
rs1396156066 3175 dbSNP
rs1477352213 3175 dbSNP
rs1191160522 3180 dbSNP
rs1396163573 3180 dbSNP
rs772422099 3186 dbSNP
rs911761810 3189 dbSNP
rs1436987977 3191 dbSNP
rs965386964 3197 dbSNP
rs1370262818 3198 dbSNP
rs1019832997 3200 dbSNP
rs1331032659 3201 dbSNP
rs1177500747 3203 dbSNP
rs1348170275 3207 dbSNP
rs1437205710 3208 dbSNP
rs746358780 3211 dbSNP
rs1007561011 3218 dbSNP
rs1275388601 3219 dbSNP
rs889922105 3225 dbSNP
rs966544350 3238 dbSNP
rs574933805 3244 dbSNP
rs553391915 3246 dbSNP
rs1254004013 3247 dbSNP
rs534980263 3249 dbSNP
rs1287175439 3253 dbSNP
rs202038699 3253 dbSNP
rs11336969 3254 dbSNP
rs201014205 3254 dbSNP
rs397718147 3254 dbSNP
rs1221592060 3255 dbSNP
rs1254185680 3262 dbSNP
rs1348541279 3277 dbSNP
rs779167251 3278 dbSNP
rs201117048 3284 dbSNP
rs1308362408 3287 dbSNP
rs1169900122 3288 dbSNP
rs1239537977 3290 dbSNP
rs1411834442 3290 dbSNP
rs1404852635 3294 dbSNP
rs959361350 3299 dbSNP
rs1374749720 3308 dbSNP
rs1396684517 3309 dbSNP
rs906205235 3310 dbSNP
rs1046279601 3312 dbSNP
rs947970175 3313 dbSNP
rs1392145761 3316 dbSNP
rs1326770387 3317 dbSNP
rs1229281974 3319 dbSNP
rs1282085945 3326 dbSNP
rs1355132222 3329 dbSNP
rs916542584 3332 dbSNP
rs1301480025 3334 dbSNP
rs1470259131 3342 dbSNP
rs1207353444 3346 dbSNP
rs1436922792 3346 dbSNP
rs375663853 3348 dbSNP
rs79192921 3350 dbSNP
rs1195708160 3352 dbSNP
rs906770511 3353 dbSNP
rs74382553 3363 dbSNP
rs1165818643 3382 dbSNP
rs1420082592 3383 dbSNP
rs775280511 3385 dbSNP
rs1004807644 3394 dbSNP
rs965335871 3396 dbSNP
rs888593949 3400 dbSNP
rs550304886 3403 dbSNP
rs1422903697 3406 dbSNP
rs985516815 3406 dbSNP
rs1331948027 3412 dbSNP
rs1253596503 3415 dbSNP
rs930356791 3424 dbSNP
rs1339567457 3427 dbSNP
rs1414997832 3427 dbSNP
rs1189805292 3434 dbSNP
rs1326497476 3435 dbSNP
rs921645012 3438 dbSNP
rs1021906043 3441 dbSNP
rs1351941896 3442 dbSNP
rs570072975 3448 dbSNP
rs189837364 3452 dbSNP
rs1188878782 3453 dbSNP
rs1259821400 3461 dbSNP
rs745634424 3472 dbSNP
rs911782037 3473 dbSNP
rs1364381518 3482 dbSNP
rs1170647175 3486 dbSNP
rs1455274317 3486 dbSNP
rs111392734 3487 dbSNP
rs1401199764 3487 dbSNP
rs770733436 3488 dbSNP
rs568202171 3491 dbSNP
rs1241772747 3501 dbSNP
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rs1046486394 3507 dbSNP
rs1254666297 3509 dbSNP
rs1011950334 3512 dbSNP
rs1347644291 3515 dbSNP
rs895036278 3516 dbSNP
rs915037898 3517 dbSNP
rs1359629018 3520 dbSNP
rs990008615 3522 dbSNP
rs144432973 3525 dbSNP
rs1204600913 3526 dbSNP
rs1251312864 3527 dbSNP
rs1420849309 3527 dbSNP
rs1033709322 3529 dbSNP
rs1454559683 3531 dbSNP
rs1175210633 3533 dbSNP
rs1310763736 3535 dbSNP
rs931102865 3536 dbSNP
rs918429442 3538 dbSNP
rs755916824 3541 dbSNP
rs1384522766 3543 dbSNP
rs1299843421 3544 dbSNP
rs1370826530 3545 dbSNP
rs970695180 3545 dbSNP
rs944116977 3549 dbSNP
rs1016274894 3552 dbSNP
rs1306069861 3554 dbSNP
rs1356488443 3558 dbSNP
rs1004434573 3560 dbSNP
rs888615269 3565 dbSNP
rs1204059356 3568 dbSNP
rs1252070973 3568 dbSNP
rs368970067 3569 dbSNP
rs1387716716 3570 dbSNP
rs778056970 3570 dbSNP
rs1027154042 3575 dbSNP
rs1456908770 3579 dbSNP
rs912681733 3585 dbSNP
rs994582871 3589 dbSNP
rs149251979 3595 dbSNP
rs1038701328 3599 dbSNP
rs1475452767 3603 dbSNP
rs944387988 3606 dbSNP
rs1170745127 3609 dbSNP
rs1262169254 3610 dbSNP
rs564107313 3614 dbSNP
rs1448682343 3620 dbSNP
rs867424407 3624 dbSNP
rs956174817 3625 dbSNP
rs1031805979 3627 dbSNP
rs1214304890 3632 dbSNP
rs138680856 3635 dbSNP
rs1296579176 3636 dbSNP
rs528742709 3637 dbSNP
rs1242783706 3643 dbSNP
rs1003038047 3644 dbSNP
rs1272609534 3644 dbSNP
rs1215448234 3651 dbSNP
rs1246071521 3651 dbSNP
rs945307998 3656 dbSNP
rs1186827074 3657 dbSNP
rs970878027 3657 dbSNP
rs915092324 3658 dbSNP
rs375420314 3664 dbSNP
rs779264627 3665 dbSNP
rs938099641 3666 dbSNP
rs567747644 3667 dbSNP
rs1417918147 3668 dbSNP
rs1462522529 3672 dbSNP
rs982164827 3674 dbSNP
rs1387018487 3676 dbSNP
rs1430469417 3680 dbSNP
rs1328713592 3682 dbSNP
rs1381919855 3683 dbSNP
rs113312294 3684 dbSNP
rs1394488453 3685 dbSNP
rs1015556015 3686 dbSNP
rs1335577992 3687 dbSNP
rs574978273 3699 dbSNP
rs868795150 3700 dbSNP
rs559508614 3701 dbSNP
rs1266177629 3705 dbSNP
rs1316198911 3705 dbSNP
rs1262251536 3706 dbSNP
rs754420453 3706 dbSNP
rs777767185 3706 dbSNP
rs1385793998 3710 dbSNP
rs1387950651 3718 dbSNP
rs1048305607 3720 dbSNP
rs952987036 3722 dbSNP
rs1327552526 3729 dbSNP
rs1475910421 3729 dbSNP
rs1406509275 3730 dbSNP
rs1400621704 3732 dbSNP
rs1461621141 3733 dbSNP
rs1347287944 3734 dbSNP
rs1027598501 3736 dbSNP
rs1464819738 3738 dbSNP
rs1312517154 3740 dbSNP
rs1168307552 3746 dbSNP
rs897114167 3747 dbSNP
rs1286520932 3751 dbSNP
rs541357358 3753 dbSNP
rs1372588387 3756 dbSNP
rs899988783 3762 dbSNP
rs1017313282 3763 dbSNP
rs79070394 3774 dbSNP
rs1451173572 3776 dbSNP
rs890154626 3780 dbSNP
rs1042045832 3781 dbSNP
rs751498841 3782 dbSNP
rs1202482963 3787 dbSNP
rs1215585279 3789 dbSNP
rs945314775 3792 dbSNP
rs932616338 3795 dbSNP
rs1178313400 3799 dbSNP
rs893705196 3809 dbSNP
rs1452973503 3811 dbSNP
rs1053678180 3812 dbSNP
rs374735557 3815 dbSNP
rs558797350 3823 dbSNP
rs181917170 3824 dbSNP
rs1376362273 3825 dbSNP
rs937841213 3827 dbSNP
rs1326980072 3829 dbSNP
rs1354047425 3833 dbSNP
rs1257591454 3834 dbSNP
rs1442963518 3835 dbSNP
rs1281228171 3836 dbSNP
rs1365322468 3837 dbSNP
rs1233380190 3843 dbSNP
rs1303860873 3845 dbSNP
rs1213196039 3847 dbSNP
rs1349660089 3847 dbSNP
rs1225689477 3852 dbSNP
rs1341899999 3856 dbSNP
rs1271357749 3860 dbSNP
rs926411615 3871 dbSNP
rs1205931306 3874 dbSNP
rs1233127070 3876 dbSNP
rs990324583 3877 dbSNP
rs924902251 3878 dbSNP
rs982195864 3885 dbSNP
rs189391127 3889 dbSNP
rs765869488 3890 dbSNP
rs1419002991 3895 dbSNP
rs1305014633 3896 dbSNP
rs1410609307 3896 dbSNP
rs1440051398 3898 dbSNP
rs971606404 3898 dbSNP
rs554769895 3903 dbSNP
rs1432570369 3904 dbSNP
rs1269240103 3906 dbSNP
rs1339573510 3909 dbSNP
rs536747746 3912 dbSNP
rs1215880970 3913 dbSNP
rs762482594 3917 dbSNP
rs959257076 3924 dbSNP
rs1027213819 3932 dbSNP
rs1399094953 3934 dbSNP
rs1328791321 3944 dbSNP
rs1026647877 3947 dbSNP
rs1470120685 3948 dbSNP
rs1396939844 3950 dbSNP
rs995205545 3957 dbSNP
rs975600449 3959 dbSNP
rs185037968 3960 dbSNP
rs1171964706 3961 dbSNP
rs1015542193 3962 dbSNP
rs1415727132 3964 dbSNP
rs1460949273 3971 dbSNP
rs1165590381 3977 dbSNP
rs1396518413 3978 dbSNP
rs3185733 3979 dbSNP
rs1195586760 3981 dbSNP
rs199973836 3981 dbSNP
rs1291017643 3983 dbSNP
rs1008454983 3989 dbSNP
rs1354299445 3993 dbSNP
rs1233307978 3995 dbSNP
rs1019735595 3997 dbSNP
rs367800632 3998 dbSNP
rs1237866198 3999 dbSNP
rs1447838254 4000 dbSNP
rs200807089 4000 dbSNP
rs932755545 4003 dbSNP
rs1255608525 4004 dbSNP
rs893264027 4010 dbSNP
rs954471681 4015 dbSNP
rs1157829802 4021 dbSNP
rs1021062936 4023 dbSNP
rs1009251840 4024 dbSNP
rs893433112 4025 dbSNP
rs1346378064 4031 dbSNP
rs1053712773 4035 dbSNP
rs775761065 4036 dbSNP
rs1279444458 4044 dbSNP
rs950227743 4044 dbSNP
rs1234396916 4047 dbSNP
rs1351875196 4050 dbSNP
rs758389379 4052 dbSNP
rs916081506 4055 dbSNP
rs1278457804 4058 dbSNP
rs570783873 4059 dbSNP
rs528750386 4065 dbSNP
rs1211756981 4070 dbSNP
rs1259675077 4072 dbSNP
rs1181031478 4073 dbSNP
rs1417358904 4073 dbSNP
rs756552847 4073 dbSNP
rs1471044917 4078 dbSNP
rs1443882177 4082 dbSNP
rs1002083508 4085 dbSNP
rs905067361 4088 dbSNP
rs1026763939 4092 dbSNP
rs552467825 4095 dbSNP
rs147316534 4096 dbSNP
rs563290202 4097 dbSNP
rs144102667 4100 dbSNP
rs949531513 4101 dbSNP
rs1328788531 4103 dbSNP
rs191277388 4104 dbSNP
rs1242847536 4108 dbSNP
rs3209874 4109 dbSNP
rs1435493216 4112 dbSNP
rs1235255861 4113 dbSNP
rs546332374 4117 dbSNP
rs564658745 4117 dbSNP
rs1379739595 4119 dbSNP
rs931345151 4124 dbSNP
rs890915222 4127 dbSNP
rs1251245533 4131 dbSNP
rs760021667 4132 dbSNP
rs1191569715 4139 dbSNP
rs975674194 4153 dbSNP
rs1187286630 4155 dbSNP
rs1484859867 4157 dbSNP
rs541249102 4159 dbSNP
rs893210368 4159 dbSNP
rs1397900855 4162 dbSNP
rs532533337 4164 dbSNP
rs1054495294 4165 dbSNP
rs1370750926 4167 dbSNP
rs1442030274 4169 dbSNP
rs912757495 4175 dbSNP
rs11552010 4188 dbSNP
rs1281494796 4197 dbSNP
rs1305984234 4198 dbSNP
rs531169619 4205 dbSNP
rs764735792 4208 dbSNP
rs1319967609 4214 dbSNP
rs1350952183 4215 dbSNP
rs1252242859 4217 dbSNP
rs200723213 4231 dbSNP
rs371958248 4231 dbSNP
rs544048006 4233 dbSNP
rs563768387 4233 dbSNP
rs1412766863 4239 dbSNP
rs1357129824 4246 dbSNP
rs796655794 4250 dbSNP
rs916183231 4251 dbSNP
rs1055954640 4253 dbSNP
rs1374259592 4257 dbSNP
rs1399304471 4257 dbSNP
rs576407036 4257 dbSNP
rs930821125 4257 dbSNP
rs774919753 4258 dbSNP
rs1295642958 4259 dbSNP
rs957695249 4260 dbSNP
rs572045375 4265 dbSNP
rs1381833121 4270 dbSNP
rs1296517890 4271 dbSNP
rs1342479479 4272 dbSNP
rs1343316231 4273 dbSNP
rs554939737 4275 dbSNP
rs1272475564 4277 dbSNP
rs1002155742 4282 dbSNP
rs1402450696 4283 dbSNP
rs1223569826 4284 dbSNP
rs1258712547 4287 dbSNP
rs771003713 4290 dbSNP
rs1164457402 4292 dbSNP
rs1046288455 4293 dbSNP
rs960999779 4296 dbSNP
rs542789664 4308 dbSNP
rs374069674 4311 dbSNP
rs1417847454 4312 dbSNP
rs1013439838 4318 dbSNP
rs186871515 4322 dbSNP
rs1047143227 4327 dbSNP
rs1189330647 4328 dbSNP
rs1488262652 4330 dbSNP
rs1289679787 4331 dbSNP
rs554283163 4331 dbSNP
rs931384673 4333 dbSNP
rs1217329194 4342 dbSNP
rs1447067387 4344 dbSNP
rs919958887 4359 dbSNP
rs1356064910 4364 dbSNP
rs958222907 4373 dbSNP
rs1304730111 4375 dbSNP
rs1028690524 4376 dbSNP
rs1336739046 4378 dbSNP
rs996617897 4379 dbSNP
rs1287801377 4380 dbSNP
rs1033021224 4384 dbSNP
rs1257570689 4384 dbSNP
rs199802590 4384 dbSNP
rs1039664156 4388 dbSNP
rs1406352697 4392 dbSNP
rs1418865279 4402 dbSNP
rs184554260 4406 dbSNP
rs138440017 4408 dbSNP
rs1290496711 4410 dbSNP
rs1312394326 4416 dbSNP
rs1310872058 4418 dbSNP
rs1450238127 4430 dbSNP
rs551548406 4434 dbSNP
rs987428496 4435 dbSNP
rs967579095 4438 dbSNP
rs913352258 4443 dbSNP
rs1433049901 4444 dbSNP
rs987948599 4446 dbSNP
rs1045722954 4448 dbSNP
rs1345351512 4449 dbSNP
rs1233156242 4451 dbSNP
rs1345854020 4451 dbSNP
rs1288561574 4462 dbSNP
rs1014699559 4463 dbSNP
rs1443658673 4465 dbSNP
rs1201740326 4469 dbSNP
rs1231739253 4479 dbSNP
rs770042498 4484 dbSNP
rs150468182 4495 dbSNP
rs1179705758 4496 dbSNP
rs1460050568 4496 dbSNP
rs1420229678 4499 dbSNP
rs1452917876 4500 dbSNP
rs764688076 4501 dbSNP
rs1426062487 4502 dbSNP
rs2112452 4506 dbSNP
rs930768850 4508 dbSNP
rs140492087 4510 dbSNP
rs1442797230 4512 dbSNP
rs1038088599 4516 dbSNP
rs1333246101 4516 dbSNP
rs939749280 4520 dbSNP
rs1439821775 4526 dbSNP
rs908322839 4529 dbSNP
rs1475479547 4530 dbSNP
rs969020227 4531 dbSNP
rs1211227248 4532 dbSNP
rs1469564389 4536 dbSNP
rs1212347360 4540 dbSNP
rs1271650099 4554 dbSNP
rs1273357165 4555 dbSNP
rs1197789263 4560 dbSNP
rs1305534358 4572 dbSNP
rs1260496281 4583 dbSNP
rs955240551 4584 dbSNP
rs1024907761 4587 dbSNP
rs367647574 4588 dbSNP
rs1362808174 4591 dbSNP
rs1302795742 4592 dbSNP
rs1438752234 4595 dbSNP
rs573044357 4599 dbSNP
rs1466166774 4600 dbSNP
rs957161726 4601 dbSNP
rs1025889367 4603 dbSNP
rs995631478 4616 dbSNP
rs898564973 4625 dbSNP
rs1460785909 4629 dbSNP
rs1039739233 4631 dbSNP
rs1323951272 4637 dbSNP
rs1326812983 4640 dbSNP
rs1332508712 4643 dbSNP
rs192929291 4646 dbSNP
rs746922117 4650 dbSNP
rs1461856826 4656 dbSNP
rs776558562 4661 dbSNP
rs968436711 4661 dbSNP
rs1260553434 4664 dbSNP
rs1353089429 4667 dbSNP
rs1173228549 4668 dbSNP
rs373844162 4671 dbSNP
rs1429655957 4674 dbSNP
rs779980693 4675 dbSNP
rs1024833173 4679 dbSNP
rs1394970040 4685 dbSNP
rs1014230660 4686 dbSNP
rs1474825507 4688 dbSNP
rs946288766 4688 dbSNP
rs1253298472 4690 dbSNP
rs1392651738 4695 dbSNP
rs913436070 4700 dbSNP
rs1176260443 4708 dbSNP
rs1317213215 4709 dbSNP
rs1360690639 4712 dbSNP
rs1401372879 4714 dbSNP
rs188135096 4716 dbSNP
rs368951140 4718 dbSNP
rs936431660 4719 dbSNP
rs925044265 4720 dbSNP
rs1204893367 4723 dbSNP
rs1358929066 4728 dbSNP
rs1222360148 4742 dbSNP
rs995092008 4745 dbSNP
rs980490223 4750 dbSNP
rs899455535 4754 dbSNP
rs1232257610 4762 dbSNP
rs1485360904 4763 dbSNP
rs529629804 4766 dbSNP
rs969052785 4772 dbSNP
rs1391020260 4773 dbSNP
rs1157778510 4776 dbSNP
rs1025057407 4781 dbSNP
rs1300302759 4784 dbSNP
rs992120464 4784 dbSNP
rs1310656817 4788 dbSNP
rs886846828 4788 dbSNP
rs1335461727 4793 dbSNP
rs1342780578 4794 dbSNP
rs1051309957 4800 dbSNP
rs1237415302 4800 dbSNP
rs1462758848 4803 dbSNP
rs1308956842 4811 dbSNP
rs1242620884 4814 dbSNP
rs1354735832 4814 dbSNP
rs933644440 4819 dbSNP
rs565453110 4820 dbSNP
rs1201041544 4822 dbSNP
rs920930507 4824 dbSNP
rs1435993625 4827 dbSNP
rs951359580 4831 dbSNP
rs1180875268 4833 dbSNP
rs975086046 4838 dbSNP
rs1025498091 4839 dbSNP
rs1395127086 4839 dbSNP
rs557773022 4840 dbSNP
rs935910018 4850 dbSNP
rs1394035522 4852 dbSNP
rs1157978443 4855 dbSNP
rs995317474 4865 dbSNP
rs898304668 4867 dbSNP
rs9122 4868 dbSNP
rs977206791 4872 dbSNP
rs764812378 4876 dbSNP
rs1252177461 4881 dbSNP
rs1390135108 4893 dbSNP
rs748105876 4894 dbSNP
rs532569319 4896 dbSNP
rs1331212469 4897 dbSNP
rs757022980 4898 dbSNP
rs1449384384 4900 dbSNP
rs1301531341 4906 dbSNP
rs1330735265 4907 dbSNP
rs967635046 4914 dbSNP
rs1051527926 4918 dbSNP
rs1257804914 4921 dbSNP
rs1337487670 4925 dbSNP
rs1258569394 4931 dbSNP
rs760529123 4931 dbSNP
rs568761632 4932 dbSNP
rs946349529 4943 dbSNP
rs1458933153 4944 dbSNP
rs1177575543 4949 dbSNP
rs1191516528 4952 dbSNP
rs1433390128 4954 dbSNP
rs201956502 4954 dbSNP
rs755156698 4954 dbSNP
rs1200420077 4957 dbSNP
rs1370873298 4959 dbSNP
rs1460997785 4960 dbSNP
rs993328994 4960 dbSNP
rs148332789 4961 dbSNP
rs1054691411 4965 dbSNP
rs1324286939 4971 dbSNP
rs936168762 4981 dbSNP
rs927413745 4986 dbSNP
rs1387596686 4988 dbSNP
rs1303615325 4990 dbSNP
rs980521256 4990 dbSNP
rs899403215 4995 dbSNP
rs1015209950 4999 dbSNP
rs1211643272 5001 dbSNP
rs1264602080 5004 dbSNP
rs1488660458 5006 dbSNP
rs113000845 5009 dbSNP
rs1259155237 5010 dbSNP
rs1477212029 5018 dbSNP
rs1193748734 5020 dbSNP
rs1425042296 5021 dbSNP
rs143302002 5023 dbSNP
rs1163355128 5031 dbSNP
rs1349689431 5039 dbSNP
rs1458681016 5041 dbSNP
rs890635047 5043 dbSNP
rs1295510029 5044 dbSNP
rs561156977 5045 dbSNP
rs1383072613 5050 dbSNP
rs1399543269 5054 dbSNP
rs1298864920 5055 dbSNP
rs1342338470 5060 dbSNP
rs1311855451 5067 dbSNP
rs753518151 5070 dbSNP
rs1315360065 5073 dbSNP
rs992215517 5076 dbSNP
rs7033 5077 dbSNP
rs918511459 5079 dbSNP
rs1355215322 5081 dbSNP
rs572439900 5082 dbSNP
rs973925660 5084 dbSNP
rs962520586 5085 dbSNP
rs1376541493 5090 dbSNP
rs529229307 5091 dbSNP
rs569387691 5098 dbSNP
rs759879603 5102 dbSNP
rs1419299024 5107 dbSNP
rs141284335 5110 dbSNP
rs1474781319 5111 dbSNP
rs1412947397 5112 dbSNP
rs1302194543 5116 dbSNP
rs1379800097 5116 dbSNP
rs1397621955 5120 dbSNP
rs774734431 5124 dbSNP
rs1029687882 5126 dbSNP
rs1287646823 5128 dbSNP
rs879071897 5129 dbSNP
rs749449875 5130 dbSNP
rs780775632 5135 dbSNP
rs1237473176 5136 dbSNP
rs1485978345 5138 dbSNP
rs1010673059 5140 dbSNP
rs1260878846 5142 dbSNP
rs1159483443 5144 dbSNP
rs1382327230 5149 dbSNP
rs1359720642 5153 dbSNP
rs1412903356 5153 dbSNP
rs766823825 5160 dbSNP
rs1296338626 5161 dbSNP
rs1484928893 5164 dbSNP
rs1447161889 5166 dbSNP
rs1311088878 5167 dbSNP
rs763419606 5172 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001085377 | 3UTR | UGUCCACUUCUUUUCUAGUUCUAAUCAGUUUUUAGACAUCAAGAUUUAUUUACUUUGCAUGAGAUUUGUUUCCUAUUAUUUGAAUAUGUGCUAUACACUUGAAUUAGAAAAACCUGCUUGAAUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001085377 | 3UTR | UGUCCACUUCUUUUCUAGUUCUAAUCAGUUUUUAGACAUCAAGAUUUAUUUACUUUGCAUGAGAUUUGUUUCCUAUUAUUUGAAUAUGUGCUAUACACUUGAAUUAGAAAAACCUGCUUGAAUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001085377 | 3UTR | AUGUCCACUUCUUUUCUAGUUCUAAUCAGUUUUUAGACAUCAAGAUUUAUUUACUUUGCAUGAGAUUUGUUUCCUAUUAUUUGAAUAUGUGCUAUACACUUGAAUUAGAAAAACCUGCUUGAAUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_001085377 | 3UTR | UUUAUUUACUUUGCAUGAGAUUUGUUUCCUAUUAUUUGAAUAUGUGCUAUACACUUGAAUUAGAAAAACCUGCUUGAAUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_002387 | 3UTR | UCAAGAUUUAUUUACUUUGCAUGAGAUUUGUUUCCUAUUAUUUGAAUAUGUGCUAUACACUUGAAUUAGAAAAACCUGCUUGAAUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_002387 | 3UTR | UGUCCACUUCUUUUCUAGUUCUAAUCAGUUUUUAGACAUCAAGAUUUAUUUACUUUGCAUGAGAUUUGUUUCCUAUUAUUUGAAUAUGUGCUAUACACUUGAAUUAGAAAAACCUGCUUGAAUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000302475.4 | 3UTR | UCAAGAUUUAUUUACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000302475.4 | 3UTR | UCAAGAUUUAUUUACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
136 hsa-miR-3973 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT060560 CCND1 cyclin D1 2 2
MIRT060977 LAMC1 laminin subunit gamma 1 2 2
MIRT067617 TMPO thymopoietin 2 2
MIRT072503 RAB8B RAB8B, member RAS oncogene family 2 2
MIRT092048 ABHD5 abhydrolase domain containing 5 2 6
MIRT093449 MSMO1 methylsterol monooxygenase 1 2 2
MIRT093538 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT095404 UBE2D2 ubiquitin conjugating enzyme E2 D2 2 2
MIRT103367 CBX3 chromobox 3 2 2
MIRT110447 PLEKHA1 pleckstrin homology domain containing A1 2 10
MIRT161196 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT161903 FXR1 FMR1 autosomal homolog 1 2 2
MIRT192775 B2M beta-2-microglobulin 2 2
MIRT195782 ATMIN ATM interactor 2 6
MIRT228194 BNC2 basonuclin 2 2 2
MIRT237882 WHSC1 nuclear receptor binding SET domain protein 2 2 4
MIRT249021 PABPC3 poly(A) binding protein cytoplasmic 3 2 8
MIRT273958 SPRYD4 SPRY domain containing 4 2 2
MIRT309023 USP53 ubiquitin specific peptidase 53 2 2
MIRT312596 G3BP1 G3BP stress granule assembly factor 1 2 4
MIRT315536 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT319305 CAV1 caveolin 1 2 2
MIRT324436 TBC1D13 TBC1 domain family member 13 2 2
MIRT325710 CSTF2 cleavage stimulation factor subunit 2 2 2
MIRT340681 THRAP3 thyroid hormone receptor associated protein 3 2 2
MIRT404628 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT443473 ACPP acid phosphatase, prostate 2 2
MIRT443545 ZNRF2 zinc and ring finger 2 2 2
MIRT446290 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT447066 MCC mutated in colorectal cancers 2 2
MIRT447365 RASA2 RAS p21 protein activator 2 2 2
MIRT450079 ZNF354C zinc finger protein 354C 2 2
MIRT454270 PSMA1 proteasome subunit alpha 1 2 2
MIRT456032 CRYZ crystallin zeta 2 8
MIRT462069 CCDC77 coiled-coil domain containing 77 2 4
MIRT466379 TGOLN2 trans-golgi network protein 2 2 4
MIRT470352 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT471866 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT474453 KLHL11 kelch like family member 11 2 8
MIRT476188 GOLGA8A golgin A8 family member A 2 10
MIRT476645 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT481544 ARL10 ADP ribosylation factor like GTPase 10 2 10
MIRT481791 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT482527 ACTB actin beta 2 4
MIRT485570 FOXQ1 forkhead box Q1 2 2
MIRT486011 LPAR2 lysophosphatidic acid receptor 2 2 2
MIRT495182 MUC20 mucin 20, cell surface associated 2 2
MIRT496047 MORC1 MORC family CW-type zinc finger 1 2 2
MIRT497114 JRKL JRK like 2 2
MIRT497494 RGS17 regulator of G protein signaling 17 2 2
MIRT497752 OXGR1 oxoglutarate receptor 1 2 2
MIRT500217 INHBA inhibin beta A subunit 2 10
MIRT501079 SMAD7 SMAD family member 7 2 8
MIRT501453 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT502793 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 6
MIRT502879 CDK4 cyclin dependent kinase 4 2 8
MIRT505796 RSBN1 round spermatid basic protein 1 2 8
MIRT506345 NUP54 nucleoporin 54 2 6
MIRT507415 ELK4 ELK4, ETS transcription factor 2 4
MIRT509272 NPM3 nucleophosmin/nucleoplasmin 3 2 6
MIRT514931 TRIM73 tripartite motif containing 73 2 2
MIRT515441 TRIM74 tripartite motif containing 74 2 2
MIRT516026 A1CF APOBEC1 complementation factor 2 2
MIRT517375 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT527925 FRY FRY microtubule binding protein 2 2
MIRT529611 H1F0 H1 histone family member 0 2 2
MIRT530606 C7orf33 chromosome 7 open reading frame 33 2 4
MIRT530970 EXO5 exonuclease 5 2 4
MIRT532108 RRP8 ribosomal RNA processing 8 2 2
MIRT533006 ZFHX3 zinc finger homeobox 3 2 4
MIRT533103 YOD1 YOD1 deubiquitinase 2 2
MIRT533231 VLDLR very low density lipoprotein receptor 2 2
MIRT534073 SRPK1 SRSF protein kinase 1 2 2
MIRT534457 SCML2 Scm polycomb group protein like 2 2 4
MIRT536678 IKZF5 IKAROS family zinc finger 5 2 2
MIRT538224 CYR61 cysteine rich angiogenic inducer 61 2 2
MIRT539218 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT541157 PABPC1 poly(A) binding protein cytoplasmic 1 2 4
MIRT552682 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT554457 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT556688 KLHL28 kelch like family member 28 2 2
MIRT558162 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT558195 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT558752 CHERP calcium homeostasis endoplasmic reticulum protein 2 2
MIRT561871 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT567443 GNG12 G protein subunit gamma 12 2 2
MIRT568399 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT569178 DMD dystrophin 2 2
MIRT571465 CCDC80 coiled-coil domain containing 80 2 2
MIRT575987 Fem1a feminization 1 homolog a (C. elegans) 2 5
MIRT606844 FEM1A fem-1 homolog A 2 7
MIRT615813 COQ7 coenzyme Q7, hydroxylase 2 2
MIRT619491 QSOX2 quiescin sulfhydryl oxidase 2 2 2
MIRT624354 CHRM3 cholinergic receptor muscarinic 3 2 2
MIRT625979 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT628564 MELK maternal embryonic leucine zipper kinase 2 2
MIRT631329 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT639435 PKP1 plakophilin 1 2 2
MIRT640366 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT640701 SKI SKI proto-oncogene 2 2
MIRT640718 CEP68 centrosomal protein 68 2 2
MIRT641217 TRIB1 tribbles pseudokinase 1 2 4
MIRT642271 SMIM17 small integral membrane protein 17 2 2
MIRT644011 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT645146 CUBN cubilin 2 2
MIRT653158 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT654475 RANBP2 RAN binding protein 2 2 2
MIRT656177 MRPL44 mitochondrial ribosomal protein L44 2 2
MIRT658719 ELMOD2 ELMO domain containing 2 2 2
MIRT658857 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT663935 ZNF554 zinc finger protein 554 2 2
MIRT664901 EMC7 ER membrane protein complex subunit 7 2