miRTarBase - #MIRT447212


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pre-miRNA Information
pre-miRNA hsa-mir-3150b   
Genomic Coordinates chr8: 95072911 - 95072996
Description Homo sapiens miR-3150b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3150b-3p
Sequence 53| UGAGGAGAUCGUCGAGGUUGG |73
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 15 8 - 95072930 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1256195314 2 dbSNP
rs1484412577 6 dbSNP
rs1412064940 14 dbSNP
rs1185404105 16 dbSNP
rs886360149 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol APBB2   
Synonyms FE65L, FE65L1
Description amyloid beta precursor protein binding family B member 2
Transcript NM_001166050   
Other Transcripts NM_001166051 , NM_001166052 , NM_001166053 , NM_001166054 , NM_004307 , NM_173075   
Expression
Putative miRNA Targets on APBB2
3'UTR of APBB2
(miRNA target sites are highlighted)		 
>APBB2|NM_001166050|3'UTR
   1 CTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCT
  81 TCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTT
 161 GCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGTCTTTT
 241 TCTTATTGTAAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAACT
 321 AACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAA
 401 GTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGG
 481 ATGGCGAGTTTGTGTTTTAATTTTTCATAAAATTGAACCTGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAAC
 561 CAACTGGCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATGTTGGAAA
 641 AAAATGAAACTTCAAAATTGATGAAAAACTAAATTCGAGGAATTAAAATCGAACAAAACATAGCCTTTCTTTTCCGATGG
 721 TTTTCAAACTGATTATTTTTAAAAGAGATTAATAAAATCATAATGCATTTTGGGTGGGACATATTTCAAACTTCTGCCTT
 801 ATATTGTACGGTGCAGCTAGAGAATTATAGTTCACTATGGCCATTCTCTACATAAACATTAAGATGAAATACTCCTCATC
 881 AGCCTTTCATCCTTAGTTTGAGAATTAGCTGATATGCAATTTGAAGTTGAGGAAATATCATTGATATTTCTATCATGCAC
 961 GATTATTTTAGATTTCTACCACCGTGTGATTTTTGCTAGTCCATGTGCTAGAGGTAAACGTTCTGCTGGAATTCTGCATC
1041 CAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGCAACAAATTACATTA
1121 GGTTGAACCTTTCCTTGATTTTATGTATTTAATATTAGAATTTGTTGGACTCAACTAGATATATTTTTTAATTTATATTT
1201 TTTCCATTTTACTTTGAAGATTTGAAATGTTCATACCTGAGCAAAGTCTACACAGGAGTAATGGACTGTTTAACAAGTTT
1281 CCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGCTGGAAAGACATACAAATTTAGACTCTCGTTG
1361 ACATTGTCGTTTTAAAAGGAAGTTGCTAAGGCGATCAATCTCAATATTAGTCTTGTTTACTTCTTCTTAATGTCAAAATT
1441 AACATTTACAACATCCAATTATAAAAGTAATGCTTTATGTTTATACACTGCTATGTACTTGTCAAAATGGTTTCCACATT
1521 CTTATCACATCTGAGCCTTACCAGGTAGAGAAGGTACTAAATACACTTTAGAAGTAAAAATATGAAGTACCGAGAGGCTA
1601 AACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAAACCAGGACTAGGACCCACGGCTCCCAAAGCCCGTTCTTGCTGT
1681 GTTGTGCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATACTAAGAAGAGCAGGTATGGAAA
1761 GATCTATTGTCAGGGAATCTTAGAATTCCCTACACGAGTGGGAGAAAGATGTCCAAATTCCTTACGCAGTGGTATTCATG
1841 ATGGTGCCCTATCTAAGTCCAGGACTGTTTTCCTACAGCGTGCCTCAAAAGTGTTGTAGAGGGCAGGATTCTACATTCAC
1921 AGCCTGTTCCATCTACGAGATTTTCCAGATGCTACTTGTGGTAGACATTCCTAACTCATGGTACTTAGCCACCAGAGATC
2001 ATGATGGAATGAGTGGGTGGCTTTTCTACCTGCCATTCCCTCAGAATTCATGAGGGGTGGGGGACAGGGGGACCGGAATT
2081 GTCTTAGCACCCCAATGTTATGACAAAACTATGCTACTTTAGAAACGCAGTCTGTTTTTCACCAATTGACATACTACTGA
2161 TCTGAAGTAACCAGTGCCATCATAAGAAATTACTGCATTAAGAAAATCCTTGCTGTGCCCTTTGAAAAGCTGTTCAGAAA
2241 TCATTTACAGTGATCTTTCATCTCGGTCGCTGTAGTGAAACATTTTAGTGTGATAAATTTCAAAATTCTAAACAAATTAC
2321 CCACTTTTATATTGGAAATCTCTACCAGAACTCCCTCTTCATTTTTTAAGGCATACATTTGCTTGTTTTCAAGATCAAGA
2401 ATTCTGAGCTAGCTTTAAGTAGCAAACTGATTTATATGTGCAATTATAGGATGCATTAAGATGAATGATAGCCTTTACAT
2481 ATTGAAAACTTTGCAGACGTTTTGTTTTGAAAATGGCATTGTATAGTAAATGCAAATTAATTTTGTAAAATTATGTTAAA
2561 GAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATGTGTGTATTTGTTTGTAAAAGGATGCCAA
2641 TGTTTTACCTGATATCTTAGTGACACTTCAGTTATCTATGCATTCTTTAGATCTGTGATTCGGTAAACAGGCAGCCATGT
2721 TCACGATGCCTTCTATGTCTTACCATATTTTTAATTAACCTGTTAAATACAGCTTAAAATATTTTTATTTTATTTATTCT
2801 ATTTTTACTGAAATATACTGCATTATTGTGTTAATGTATTATCTTTCCTGGATATTATCTCCCAGTGTATCCAGATCTAA
2881 GTAATCTCAGTGAACTATACATTGCCTAAAAAGTGGTTTTGTAATGATTTGTAGTCACATTTCTATTGGGATATGTAGAA
2961 GAAAAGGCAAAATGCTTAAAGTTCCTTTTATTTTTTAAAAGCAGCTAGATAGACACAGACTTGCCACCTCATACATCTGC
3041 TCCTTGGCAACATCAAGGGGAACGACTAGCCAACATGCCTATGGCTAAAAACTTTCCTTTGCAGACTAAAGCACTGCTTG
3121 GTGCTTCGTTTTTCTACCCTTCACAACATGTGTGATTTCATCTAAGAGATATATACATGTACACATGCCCTTTGTTTCCA
3201 CCTGGATACAAGATCACTCATAGCTAATTAGGACCATTGTTTTTTGTTCATCTGTCTTGTTGCATGAAGGGACATTAGAC
3281 CCATTTCCATTAAAATAAGTTCTTGGTGATAAACTGTGGCACTGCTACTTCTTTTTAAATCCACTTTATGATTTCAAGAT
3361 GGACACTTGTAAGATGACTCGACACAAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCATG
3441 TCCCAGGCATTGCAACACAAACTCCTCAAGATTTCACCACAACATGACAAGCATTTTCCTAACTGATATTAGCACAATTT
3521 AACTAATAAGCCCCTTCGCTCTCTAGTTGGCCAGGCTTAACCTAATACACATCTAACGTGTGTGCCACACGGCCAGTAGA
3601 AAGTTTAACTTCAGCTTCAGGGCAAAGATACCCACTCACACCGTGTCAACGCAAGCAGTAGTTCCTGGCCTCCAGAGCAG
3681 CTTACTTCCCCTGAAAGAACGCTTTGTTTTCCTTTATGCCCTTTTCCTGTTGACCACTTTTACACATTTAAATGTAATTT
3761 GTTGTGAGAATAAATTTAGCTGCATAAAACGTTCGGCTCATTTATCTGACATCTTAGTCACATATACAAGGAATAGAAAT
3841 AGAAACTCGGTGTCTCTAGTTATTTTTAAATTATTCTTACCTCAGACTTCTTAGAAATCACTTTAGTAATGGAGCATTTT
3921 GCTTTGATTAGTTACTACATATTTCTGCCTGGTAAGAACTAGGAAGTAACTTCAAATTTTGAGTAATCACCCTGTACTTA
4001 TTTGGTGATCAGGAAGGCCAGCTGGCCTTCCGGACATAGAAGCCTATTTAGTCACCAACTCGAGTCTTTTGTAAGCGGTC
4081 TTGCTAGGATTGTGATATTTTAGCACGAAGAAGTTTATCACTTCCTTTAAGAACCTGACATCAAAGAATAAAGAATAGAG
4161 GTGTACACACACTAAATCCAAAATGAAAGGTAACTAGAGAAATCAGTTGAATCTGGTTTAGCTTAACTGTTAGGCGCAGG
4241 AAGGCAGATAAACAGAATTTAAAGTATGTCCCCGCTTTTTGTTCATCTTGCACTTCCACAGTGGTTTCTCTCTAGTCAGT
4321 AACAAAATTTCATTATGGTTTCAGGCATTATATGGTGGTAAATAATTTCAGATTAAAAATGTGTTTGCTATTGGAGTATC
4401 TGAATACTAGTAATTTCATTATTTAGAATTTTGCAGCACTTTTATCTCAAGAAGAAGTCCAAGAATGTAAAATGCCAAAT
4481 GAAACATGTCAGTGGAATCAATATTCTCCTTCATTAGAATTCCCTCATATTGCTTTTTTTTTTTTTCTTCAGACAGAGGA
4561 GTCTTACTCTGGAGTGCAGTGGTGTAATTTCAGCTCACCACAACCTCCACCTCCCAAGTTCAAGCAATTCTCGCCTCAGC
4641 CTCCTGAGTAGCTGGGATTACAGGCATGCACCGCCACGCCTGGCCAATTTGTATATTTTTAGTAGAGACAGGGTTTCGCC
4721 ACGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCCCAACCTCCCAAAGTATGTGAGCCACCACG
4801 TCCGGCCTCATATTGCTTTTATCCAAAATTCTTTTCCCTTTTCACTCTACCAAAGTATTTAAATAATCCTGTCCTTCATA
4881 GAAGATTCTCAAAGAAGAAAACTGCAGTGTAATTAATGAATGGTTTAATTCAGAATCTTCATATACTTCTAAAGAGAAAA
4961 ATAATTTAGTGCCAAATGCATGTTAGGAGATAATCAATGTAAGTGGCAACAAATTGTGACTTCACATGCTACTGTAGAGA
5041 TCAGAAAATTATCCTAAACTATTCCATAACAATGAGACAACATCACAGAAAATACACTTGAAAATAAAAATCTCAAGACC
5121 AGCTACTTCTGGACAATGGAATACTTTTCAGTCTGGTATGGTGGAGGGCCCGAAAAGGATAAGGGATTCTTATGATACAC
5201 AATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGCCTTCCTTGAGGCATGGACTACCCTAACCAACCAGA
5281 TAGAAATCTGGGTGGGATAAGAGGATGAGCCACACGCTATAATTTTAGGGCAAGGAGATAGTGTTTGATTTTCAAAATCA
5361 GCAAAATAAGCTGAGCACTTTATATCTTTCTGTACAAGAGTGATAACATGAAGAATTCTTCTTCAGGGATTTAAAATACA
5441 ATAAGCCTGGTTCAACTATAAAAAGTCTTGTTTCCTTTCTTCATTGACACTTTTTTTTTTTTTTTTTTTTTTTTGAGGCA
5521 AGGTCTCACTCTGCTTCCCAGGCTGGAGTGCAGTGGGGCAATATTGGCTCACTGCAACCTGCACCTCCTGGACTCAAGAG
5601 ATCCTCGTACCTCAGCCTCCTAAGTAGCTGGGACTACAGGCGTGTCCCACCACACCCAGCTAATTTTTGTATTTTTTGTA
5681 GAGATGGGGTTTTGGGGTTTCGCCATGTTGTCCAGGCTCGTCTGGAACTCCGGTGCTCAAGTGGCGTGCCCACCTCAGCC
5761 TCCCAAACTGCTGAGATTACAGATGTGAGCCACTGCACCCAGCCCACTGACACGTTTTACTGATAAATGTAAATCTAAGC
5841 TAAAATAAAAATAATGTATTACCGCTATAATACAATTCACCATTCTCTTTTCTCACTTCAAGTAAGAAAGTAAAAATAGA
5921 ATATCAGAGCTGAAGTAGACCTAAGTATTCATCTTGAAGAAGATAATATTCTAAAAATCATGCCACCTGAATTGAGCATT
6001 TAGGAATTTATGTAACATTTCTATACAACTGAATTGCAAAAATAAAACTTTAAATTCAAACTTTAAAAAAAAAAAAAAAA
6081 AAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggUUGGAGCUGCUAGAGGAGu 5'
            |:|| | : | |:||||| 
Target 5' gaAGCCCCAGAGCTTTCCTCt 3'
 3400 - 3420 139.00 -12.30
2 
miRNA  3' gguuggAGCUGCUAGAGGAGu 5'
                || |:  ||||||: 
Target 5' gtggaaTCAATATTCTCCTTc 3'
 4492 - 4512 131.00 -8.50
3 
miRNA  3' gguUGGAG-CUGCUAGAGGAGu 5'
             |||||  || |||| ||| 
Target 5' gccACCTCATAC-ATCTGCTCc 3'
 3023 - 3043 129.00 -16.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26966367 7 COSMIC
COSN30527052 11 COSMIC
COSN26553402 18 COSMIC
COSN31610000 20 COSMIC
COSN30470854 28 COSMIC
COSN32105578 36 COSMIC
COSN30103161 59 COSMIC
COSN30168000 82 COSMIC
COSN31602938 138 COSMIC
COSN24300590 139 COSMIC
COSN31586115 155 COSMIC
COSN31524457 223 COSMIC
COSN26903374 383 COSMIC
COSN9040366 383 COSMIC
COSN31544687 624 COSMIC
COSN30544507 720 COSMIC
COSN32105577 866 COSMIC
COSN31580116 931 COSMIC
COSN20100005 1162 COSMIC
COSN29106250 1224 COSMIC
COSN18894008 1249 COSMIC
COSN27213490 2005 COSMIC
COSN9040365 2249 COSMIC
COSN2028325 2295 COSMIC
COSN6830575 3025 COSMIC
COSN22228402 3128 COSMIC
COSN20099995 3462 COSMIC
COSN1297006 3823 COSMIC
COSN21135014 3982 COSMIC
COSN22365052 4125 COSMIC
COSN15099735 4327 COSMIC
COSN20099991 4438 COSMIC
COSN20099984 4533 COSMIC
COSN20099985 4534 COSMIC
COSN20099980 4556 COSMIC
COSN28198210 4567 COSMIC
COSN20099978 4568 COSMIC
COSN2028322 4781 COSMIC
COSN6830574 4867 COSMIC
COSN32064715 5386 COSMIC
COSN17730069 5695 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1164535942 8 dbSNP
rs1234230414 10 dbSNP
rs371744120 11 dbSNP
rs745361004 19 dbSNP
rs973067491 19 dbSNP
rs780703575 20 dbSNP
rs574631376 21 dbSNP
rs1475890659 24 dbSNP
rs746953974 25 dbSNP
rs185604850 26 dbSNP
rs367591196 33 dbSNP
rs1489820292 37 dbSNP
rs758202708 38 dbSNP
rs755210388 39 dbSNP
rs374930235 40 dbSNP
rs754452812 44 dbSNP
rs756422353 47 dbSNP
rs753986812 49 dbSNP
rs1025615569 50 dbSNP
rs1441431167 51 dbSNP
rs554579308 66 dbSNP
rs1375898338 67 dbSNP
rs766612855 75 dbSNP
rs534345935 76 dbSNP
rs901254707 78 dbSNP
rs1357744982 83 dbSNP
rs1327441812 86 dbSNP
rs1446976847 88 dbSNP
rs1018487332 89 dbSNP
rs572038717 107 dbSNP
rs904795238 122 dbSNP
rs1328762355 135 dbSNP
rs558695777 137 dbSNP
rs1043717832 138 dbSNP
rs1251113909 141 dbSNP
rs538691528 144 dbSNP
rs1436756864 152 dbSNP
rs946289285 155 dbSNP
rs116800756 156 dbSNP
rs1468179322 162 dbSNP
rs1208190681 170 dbSNP
rs1031213988 172 dbSNP
rs1430241111 178 dbSNP
rs1175804746 180 dbSNP
rs1158474369 186 dbSNP
rs1417468751 189 dbSNP
rs550098083 193 dbSNP
rs773832404 196 dbSNP
rs536986809 197 dbSNP
rs1410779398 202 dbSNP
rs552551899 205 dbSNP
rs1166783700 206 dbSNP
rs1056724835 220 dbSNP
rs1394819876 222 dbSNP
rs567841037 224 dbSNP
rs1386411738 226 dbSNP
rs927034264 227 dbSNP
rs1213469018 231 dbSNP
rs979984329 234 dbSNP
rs1338945962 246 dbSNP
rs1044270834 256 dbSNP
rs941877594 262 dbSNP
rs1294271144 267 dbSNP
rs1334514088 267 dbSNP
rs1485790384 270 dbSNP
rs529549023 277 dbSNP
rs983781490 281 dbSNP
rs950574887 285 dbSNP
rs1262432212 286 dbSNP
rs1056238328 287 dbSNP
rs1487252977 287 dbSNP
rs894872532 287 dbSNP
rs938963550 288 dbSNP
rs1318239606 295 dbSNP
rs192948194 303 dbSNP
rs1453808596 304 dbSNP
rs976740092 307 dbSNP
rs965479897 308 dbSNP
rs1359240215 313 dbSNP
rs1018351316 323 dbSNP
rs571263396 324 dbSNP
rs985239250 326 dbSNP
rs969302429 328 dbSNP
rs3829840 329 dbSNP
rs953895568 334 dbSNP
rs1283951745 338 dbSNP
rs1351502079 344 dbSNP
rs1212847657 348 dbSNP
rs150163611 348 dbSNP
rs1482779247 349 dbSNP
rs1021757485 353 dbSNP
rs976141787 355 dbSNP
rs1177392048 394 dbSNP
rs1419280728 403 dbSNP
rs531686601 414 dbSNP
rs563534998 415 dbSNP
rs892041577 420 dbSNP
rs1031412228 421 dbSNP
rs1377945224 421 dbSNP
rs116427525 428 dbSNP
rs529872978 431 dbSNP
rs1451688565 445 dbSNP
rs188806512 448 dbSNP
rs184021609 450 dbSNP
rs1300236839 451 dbSNP
rs1012390891 453 dbSNP
rs1391032243 455 dbSNP
rs1307179147 465 dbSNP
rs573608589 465 dbSNP
rs895323814 470 dbSNP
rs572073675 478 dbSNP
rs191869340 485 dbSNP
rs1280911879 486 dbSNP
rs1416421373 486 dbSNP
rs1207816985 507 dbSNP
rs1252841990 508 dbSNP
rs1190495753 509 dbSNP
rs909041613 515 dbSNP
rs1047554170 516 dbSNP
rs1056186382 523 dbSNP
rs1260569601 529 dbSNP
rs929240477 540 dbSNP
rs1455162786 544 dbSNP
rs923170151 549 dbSNP
rs1486655839 562 dbSNP
rs1193680494 587 dbSNP
rs138012390 588 dbSNP
rs976770949 592 dbSNP
rs1425142467 602 dbSNP
rs1260744955 606 dbSNP
rs778650887 619 dbSNP
rs1173066721 622 dbSNP
rs965388314 631 dbSNP
rs1355410567 634 dbSNP
rs1465309041 638 dbSNP
rs1329506342 640 dbSNP
rs1373330773 645 dbSNP
rs911193967 654 dbSNP
rs985954947 658 dbSNP
rs968830411 660 dbSNP
rs73235697 676 dbSNP
rs576190551 677 dbSNP
rs1217404394 680 dbSNP
rs367988879 690 dbSNP
rs1307810587 691 dbSNP
rs1037089547 693 dbSNP
rs1255803425 699 dbSNP
rs1233655927 701 dbSNP
rs776236999 702 dbSNP
rs1469516157 703 dbSNP
rs956316377 708 dbSNP
rs1380683953 715 dbSNP
rs1477327088 716 dbSNP
rs1188742176 720 dbSNP
rs1420701036 730 dbSNP
rs909762942 749 dbSNP
rs770542473 762 dbSNP
rs1035922953 764 dbSNP
rs1168948913 766 dbSNP
rs1397026359 769 dbSNP
rs1462151294 778 dbSNP
rs1003051481 787 dbSNP
rs905544763 796 dbSNP
rs1049642158 803 dbSNP
rs932448534 808 dbSNP
rs922438592 809 dbSNP
rs556744039 810 dbSNP
rs536466752 828 dbSNP
rs1462455735 835 dbSNP
rs60603068 838 dbSNP
rs1336575473 841 dbSNP
rs1233443662 852 dbSNP
rs1048049228 858 dbSNP
rs929104460 863 dbSNP
rs376320203 878 dbSNP
rs923075330 878 dbSNP
rs1429858200 880 dbSNP
rs746157583 882 dbSNP
rs1040325793 884 dbSNP
rs1218598719 892 dbSNP
rs1482400033 895 dbSNP
rs978474777 911 dbSNP
rs943231271 913 dbSNP
rs1192029135 914 dbSNP
rs1420468341 915 dbSNP
rs1475661620 916 dbSNP
rs777779729 916 dbSNP
rs1411758259 918 dbSNP
rs758202304 921 dbSNP
rs1402564894 923 dbSNP
rs1466791733 935 dbSNP
rs985472451 938 dbSNP
rs969238401 952 dbSNP
rs1319039373 954 dbSNP
rs77664740 960 dbSNP
rs1012505410 968 dbSNP
rs1296116875 971 dbSNP
rs1357062363 983 dbSNP
rs773644990 989 dbSNP
rs534172779 996 dbSNP
rs956221995 999 dbSNP
rs1249332459 1003 dbSNP
rs186971453 1011 dbSNP
rs1035786159 1013 dbSNP
rs757496096 1014 dbSNP
rs182308878 1019 dbSNP
rs1260069917 1035 dbSNP
rs747985662 1043 dbSNP
rs1486176539 1044 dbSNP
rs1298669329 1045 dbSNP
rs896875742 1046 dbSNP
rs1235993811 1048 dbSNP
rs1471272624 1050 dbSNP
rs1159289343 1051 dbSNP
rs1368824559 1052 dbSNP
rs1419031465 1052 dbSNP
rs970333199 1053 dbSNP
rs111569874 1054 dbSNP
rs888117394 1056 dbSNP
rs1296806903 1058 dbSNP
rs1338400307 1061 dbSNP
rs1443923429 1078 dbSNP
rs61138249 1080 dbSNP
rs549425512 1088 dbSNP
rs1346298753 1093 dbSNP
rs1172673539 1097 dbSNP
rs1200299011 1098 dbSNP
rs1276941208 1113 dbSNP
rs397880638 1113 dbSNP
rs887545739 1116 dbSNP
rs1041258194 1118 dbSNP
rs1396316699 1121 dbSNP
rs1026080476 1123 dbSNP
rs1193714938 1128 dbSNP
rs1237664830 1137 dbSNP
rs1437156327 1142 dbSNP
rs1437859135 1142 dbSNP
rs1195551760 1143 dbSNP
rs1248400857 1144 dbSNP
rs1396867585 1145 dbSNP
rs1466479980 1146 dbSNP
rs1197308160 1147 dbSNP
rs1171858660 1150 dbSNP
rs1480858268 1151 dbSNP
rs1411314791 1158 dbSNP
rs75021705 1168 dbSNP
rs1398962000 1174 dbSNP
rs923992371 1177 dbSNP
rs978207563 1179 dbSNP
rs1332245360 1181 dbSNP
rs1233780027 1195 dbSNP
rs1273453603 1196 dbSNP
rs993216427 1198 dbSNP
rs1199538463 1203 dbSNP
rs1257708762 1204 dbSNP
rs1305635400 1206 dbSNP
rs1456595003 1216 dbSNP
rs1215700576 1227 dbSNP
rs529858538 1234 dbSNP
rs1253704355 1241 dbSNP
rs1433709739 1265 dbSNP
rs1198011532 1268 dbSNP
rs946669250 1271 dbSNP
rs1171094421 1277 dbSNP
rs1288035662 1283 dbSNP
rs1234141398 1284 dbSNP
rs1327333155 1285 dbSNP
rs754794817 1303 dbSNP
rs1040190754 1304 dbSNP
rs1335675726 1307 dbSNP
rs1386729336 1308 dbSNP
rs1322099467 1314 dbSNP
rs1305559706 1322 dbSNP
rs551800783 1323 dbSNP
rs889028500 1338 dbSNP
rs1277949989 1342 dbSNP
rs541383679 1347 dbSNP
rs1235297096 1348 dbSNP
rs1266128165 1351 dbSNP
rs77279725 1354 dbSNP
rs1209201627 1355 dbSNP
rs959596511 1356 dbSNP
rs754150602 1357 dbSNP
rs1432423192 1358 dbSNP
rs1376964467 1361 dbSNP
rs758318716 1362 dbSNP
rs988864802 1364 dbSNP
rs1361975377 1366 dbSNP
rs188857900 1368 dbSNP
rs928846985 1369 dbSNP
rs1338829081 1377 dbSNP
rs981567003 1392 dbSNP
rs1419633783 1393 dbSNP
rs1321318556 1404 dbSNP
rs970743802 1406 dbSNP
rs1023198093 1408 dbSNP
rs1256460307 1409 dbSNP
rs985422046 1410 dbSNP
rs1355769379 1418 dbSNP
rs1217169683 1426 dbSNP
rs752651644 1429 dbSNP
rs1262229405 1432 dbSNP
rs1027932427 1438 dbSNP
rs1183346974 1443 dbSNP
rs878914883 1452 dbSNP
rs1484805862 1456 dbSNP
rs1282816991 1464 dbSNP
rs1184865147 1473 dbSNP
rs1381558507 1478 dbSNP
rs1420853824 1479 dbSNP
rs1158525914 1483 dbSNP
rs1359065690 1486 dbSNP
rs1437015720 1486 dbSNP
rs1303771547 1493 dbSNP
rs77676543 1504 dbSNP
rs993247537 1515 dbSNP
rs1350106652 1518 dbSNP
rs756271299 1534 dbSNP
rs1377674130 1535 dbSNP
rs1277874422 1541 dbSNP
rs1285272369 1553 dbSNP
rs112877991 1565 dbSNP
rs1212041660 1569 dbSNP
rs1256365611 1571 dbSNP
rs556000432 1572 dbSNP
rs1482727789 1583 dbSNP
rs1198315754 1586 dbSNP
rs1018819635 1590 dbSNP
rs1239488786 1591 dbSNP
rs1439737182 1592 dbSNP
rs1351643812 1595 dbSNP
rs1293052539 1610 dbSNP
rs1040979615 1611 dbSNP
rs1379058238 1625 dbSNP
rs1435415414 1631 dbSNP
rs750406781 1639 dbSNP
rs1358884851 1640 dbSNP
rs1464748568 1651 dbSNP
rs888925896 1655 dbSNP
rs542664718 1656 dbSNP
rs1446195460 1657 dbSNP
rs1307159277 1666 dbSNP
rs946774404 1669 dbSNP
rs377059694 1670 dbSNP
rs762262733 1677 dbSNP
rs1311344584 1687 dbSNP
rs1207631078 1691 dbSNP
rs893139656 1700 dbSNP
rs1457649858 1701 dbSNP
rs1197526558 1706 dbSNP
rs1417152048 1708 dbSNP
rs1185524452 1711 dbSNP
rs990799534 1720 dbSNP
rs1192229179 1722 dbSNP
rs1053046970 1736 dbSNP
rs1431842218 1744 dbSNP
rs1173243226 1748 dbSNP
rs1424677454 1754 dbSNP
rs7677848 1755 dbSNP
rs934779749 1758 dbSNP
rs1329403418 1772 dbSNP
rs1351634017 1780 dbSNP
rs1438551898 1788 dbSNP
rs982389098 1795 dbSNP
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rs961971798 1809 dbSNP
rs1279846579 1813 dbSNP
rs1015755774 1825 dbSNP
rs774820926 1826 dbSNP
rs1217570965 1827 dbSNP
rs1255629495 1831 dbSNP
rs1322953309 1834 dbSNP
rs1221622177 1838 dbSNP
rs538890062 1841 dbSNP
rs1282156675 1850 dbSNP
rs1196377045 1867 dbSNP
rs1207034305 1871 dbSNP
rs1330427937 1879 dbSNP
rs763305537 1880 dbSNP
rs1273156736 1886 dbSNP
rs1231819729 1887 dbSNP
rs1337348343 1890 dbSNP
rs879342092 1892 dbSNP
rs948933032 1892 dbSNP
rs1285190666 1893 dbSNP
rs1399041424 1901 dbSNP
rs554337971 1904 dbSNP
rs571639579 1907 dbSNP
rs754476095 1914 dbSNP
rs375409431 1915 dbSNP
rs1320446816 1917 dbSNP
rs1219356502 1919 dbSNP
rs1287219827 1920 dbSNP
rs770433602 1922 dbSNP
rs1319701450 1923 dbSNP
rs571590509 1935 dbSNP
rs996439648 1936 dbSNP
rs952355409 1937 dbSNP
rs1239486891 1945 dbSNP
rs1473243622 1957 dbSNP
rs1181427038 1959 dbSNP
rs1411636883 1964 dbSNP
rs559571297 1969 dbSNP
rs1160340401 1975 dbSNP
rs918963367 1979 dbSNP
rs1019909215 1988 dbSNP
rs998780046 1992 dbSNP
rs903131284 2001 dbSNP
rs971712165 2007 dbSNP
rs558003258 2013 dbSNP
rs746532907 2016 dbSNP
rs1167108329 2030 dbSNP
rs1379880575 2032 dbSNP
rs893870617 2039 dbSNP
rs1242989081 2049 dbSNP
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rs1018725932 2060 dbSNP
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rs1465441856 2074 dbSNP
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rs1252478633 2100 dbSNP
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rs973124499 5033 dbSNP
rs926343549 5042 dbSNP
rs1430753477 5048 dbSNP
rs747123198 5049 dbSNP
rs777781026 5052 dbSNP
rs1172527117 5053 dbSNP
rs1423611183 5056 dbSNP
rs1412003884 5057 dbSNP
rs1309009245 5059 dbSNP
rs550369321 5064 dbSNP
rs1408204557 5066 dbSNP
rs1003934724 5072 dbSNP
rs1331778830 5080 dbSNP
rs1007660279 5081 dbSNP
rs1274190855 5083 dbSNP
rs1342784302 5086 dbSNP
rs1230410090 5095 dbSNP
rs1275060093 5096 dbSNP
rs955238763 5098 dbSNP
rs1029908958 5100 dbSNP
rs954625841 5100 dbSNP
rs996809610 5124 dbSNP
rs1009367929 5126 dbSNP
rs531143769 5132 dbSNP
rs1268512294 5149 dbSNP
rs1053656854 5153 dbSNP
rs569958134 5159 dbSNP
rs904635858 5162 dbSNP
rs748096246 5171 dbSNP
rs1000841999 5172 dbSNP
rs369896351 5174 dbSNP
rs562093898 5178 dbSNP
rs1428172586 5180 dbSNP
rs903836872 5191 dbSNP
rs1042461564 5193 dbSNP
rs1310907279 5197 dbSNP
rs542553847 5200 dbSNP
rs528783530 5201 dbSNP
rs1296967601 5212 dbSNP
rs929599565 5214 dbSNP
rs919418923 5217 dbSNP
rs1208786099 5223 dbSNP
rs551726641 5225 dbSNP
rs1287105089 5227 dbSNP
rs973572093 5236 dbSNP
rs918129791 5242 dbSNP
rs73810657 5243 dbSNP
rs1166425418 5244 dbSNP
rs1448051761 5249 dbSNP
rs1185807011 5254 dbSNP
rs938303325 5257 dbSNP
rs1369329748 5258 dbSNP
rs1424034705 5262 dbSNP
rs926849759 5263 dbSNP
rs1388952540 5266 dbSNP
rs1161581558 5268 dbSNP
rs546194797 5270 dbSNP
rs985784965 5272 dbSNP
rs954534065 5279 dbSNP
rs758449148 5281 dbSNP
rs1387725676 5282 dbSNP
rs778840446 5285 dbSNP
rs1432712308 5297 dbSNP
rs1314589173 5300 dbSNP
rs1340749428 5315 dbSNP
rs1030206153 5316 dbSNP
rs1282022516 5319 dbSNP
rs962383033 5324 dbSNP
rs577277659 5339 dbSNP
rs1248609248 5340 dbSNP
rs908173530 5340 dbSNP
rs1208736937 5341 dbSNP
rs1268123756 5342 dbSNP
rs754846790 5342 dbSNP
rs10007725 5343 dbSNP
rs1257268894 5350 dbSNP
rs1423562945 5353 dbSNP
rs1032163424 5361 dbSNP
rs60093480 5369 dbSNP
rs1029527359 5371 dbSNP
rs1223961818 5380 dbSNP
rs997066372 5384 dbSNP
rs1158510880 5387 dbSNP
rs116624391 5387 dbSNP
rs1411221385 5388 dbSNP
rs779467299 5397 dbSNP
rs1304412683 5403 dbSNP
rs544820684 5405 dbSNP
rs755353240 5406 dbSNP
rs1226329510 5410 dbSNP
rs1367950251 5413 dbSNP
rs1296864557 5414 dbSNP
rs1386741742 5415 dbSNP
rs1228533909 5416 dbSNP
rs375649480 5425 dbSNP
rs555918975 5425 dbSNP
rs543809261 5427 dbSNP
rs1327756900 5437 dbSNP
rs1236114847 5439 dbSNP
rs1483137531 5439 dbSNP
rs4861314 5440 dbSNP
rs1458085957 5455 dbSNP
rs1483495154 5456 dbSNP
rs1181608652 5457 dbSNP
rs1249672503 5458 dbSNP
rs1369637504 5458 dbSNP
rs1178167628 5459 dbSNP
rs929548736 5460 dbSNP
rs898106980 5462 dbSNP
rs1166136861 5465 dbSNP
rs1372076996 5466 dbSNP
rs1431155735 5466 dbSNP
rs1390276117 5467 dbSNP
rs1198034151 5470 dbSNP
rs1431370463 5472 dbSNP
rs1312115385 5473 dbSNP
rs142799810 5473 dbSNP
rs1269125960 5474 dbSNP
rs1191614280 5475 dbSNP
rs1231600053 5476 dbSNP
rs1490573138 5476 dbSNP
rs1251429733 5479 dbSNP
rs1020908041 5480 dbSNP
rs1203311525 5480 dbSNP
rs1344364338 5482 dbSNP
rs1251975374 5483 dbSNP
rs1233090567 5484 dbSNP
rs1277180731 5484 dbSNP
rs1311018230 5486 dbSNP
rs1343189541 5488 dbSNP
rs1303858138 5489 dbSNP
rs1249828590 5490 dbSNP
rs1037809412 5493 dbSNP
rs1319566525 5493 dbSNP
rs1009686194 5498 dbSNP
rs1405975337 5509 dbSNP
rs1349469802 5510 dbSNP
rs1305742980 5514 dbSNP
rs11405521 5515 dbSNP
rs1167591333 5515 dbSNP
rs1191557559 5515 dbSNP
rs1293588236 5515 dbSNP
rs1352340580 5515 dbSNP
rs1367573814 5515 dbSNP
rs1391820481 5515 dbSNP
rs1430116993 5515 dbSNP
rs1432504755 5515 dbSNP
rs1454968715 5515 dbSNP
rs1459051469 5515 dbSNP
rs35173008 5515 dbSNP
rs397880207 5515 dbSNP
rs397880810 5515 dbSNP
rs766280574 5515 dbSNP
rs1211769851 5516 dbSNP
rs1449855606 5516 dbSNP
rs1491583408 5516 dbSNP
rs1187694765 5517 dbSNP
rs1491433182 5517 dbSNP
rs1164907979 5518 dbSNP
rs1491543871 5518 dbSNP
rs1348825110 5521 dbSNP
rs1459370531 5525 dbSNP
rs1323152381 5526 dbSNP
rs367794027 5531 dbSNP
rs1434904925 5532 dbSNP
rs1396504937 5533 dbSNP
rs910265726 5538 dbSNP
rs1229134087 5539 dbSNP
rs1312224367 5543 dbSNP
rs896548298 5543 dbSNP
rs986284986 5546 dbSNP
rs1379364716 5551 dbSNP
rs1056654946 5552 dbSNP
rs767280199 5564 dbSNP
rs938196565 5567 dbSNP
rs1240107301 5577 dbSNP
rs1484086861 5580 dbSNP
rs1182107437 5588 dbSNP
rs60782852 5598 dbSNP
rs1472115873 5604 dbSNP
rs905331534 5606 dbSNP
rs1457148723 5607 dbSNP
rs572781271 5619 dbSNP
rs1361283311 5623 dbSNP
rs987833314 5624 dbSNP
rs956590129 5627 dbSNP
rs941592371 5638 dbSNP
rs908243288 5639 dbSNP
rs982431307 5641 dbSNP
rs933780052 5642 dbSNP
rs1482546291 5648 dbSNP
rs969213135 5657 dbSNP
rs1282002254 5660 dbSNP
rs1258337360 5667 dbSNP
rs1224682256 5669 dbSNP
rs193302769 5671 dbSNP
rs1313753644 5678 dbSNP
rs547137125 5684 dbSNP
rs1210478104 5686 dbSNP
rs539060632 5692 dbSNP
rs371070455 5697 dbSNP
rs922365456 5698 dbSNP
rs1328860023 5701 dbSNP
rs1023507433 5712 dbSNP
rs975163259 5720 dbSNP
rs1183766927 5731 dbSNP
rs1013412908 5732 dbSNP
rs570310299 5744 dbSNP
rs1332925089 5745 dbSNP
rs138759529 5746 dbSNP
rs1415471561 5748 dbSNP
rs978686804 5786 dbSNP
rs1373923589 5798 dbSNP
rs1403749832 5808 dbSNP
rs967257763 5813 dbSNP
rs1456646333 5814 dbSNP
rs145847964 5819 dbSNP
rs1277708454 5823 dbSNP
rs1347028613 5826 dbSNP
rs773340663 5830 dbSNP
rs1161181043 5833 dbSNP
rs1009962812 5835 dbSNP
rs1279305635 5836 dbSNP
rs1345422755 5846 dbSNP
rs1206881050 5863 dbSNP
rs896462492 5864 dbSNP
rs1037923748 5873 dbSNP
rs1364643778 5876 dbSNP
rs1186901062 5880 dbSNP
rs547968558 5890 dbSNP
rs1191018447 5892 dbSNP
rs1393689230 5895 dbSNP
rs528984410 5904 dbSNP
rs1169480410 5907 dbSNP
rs1370115785 5913 dbSNP
rs1408345847 5913 dbSNP
rs889281202 5927 dbSNP
rs1258384984 5938 dbSNP
rs1437148479 5942 dbSNP
rs1035527752 5946 dbSNP
rs1002258922 5949 dbSNP
rs1230262461 5960 dbSNP
rs1204789646 5964 dbSNP
rs1338331424 5967 dbSNP
rs1464851490 5986 dbSNP
rs905362368 5988 dbSNP
rs1266611473 5992 dbSNP
rs1291361173 5995 dbSNP
rs1451634638 5999 dbSNP
rs1211042945 6002 dbSNP
rs1251610773 6009 dbSNP
rs1038541670 6011 dbSNP
rs1189607818 6012 dbSNP
rs1350901197 6015 dbSNP
rs1283191500 6022 dbSNP
rs1242201458 6030 dbSNP
rs1050649786 6043 dbSNP
rs879400922 6051 dbSNP
rs933051760 6051 dbSNP
rs1165180466 6064 dbSNP
rs1304021889 6064 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gguuggAGCUGCU--AGAGGAGu 5'
                || | ||  || || | 
Target 5' ------UC-AAGAUUUCACCACa 3'
 		1 - 16
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000295974.8 | 3UTR | UCAAGAUUUCACCACAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
PAAD -0.999 0 -1.000 0.5 4 Click to see details
HNSC -0.341 0.01 -0.392 0.01 41 Click to see details
BRCA -0.207 0.05 -0.316 0.01 65 Click to see details
BLCA -0.438 0.05 -0.404 0.07 15 Click to see details
STAD -0.34 0.06 -0.397 0.03 22 Click to see details
THCA -0.307 0.06 -0.209 0.15 26 Click to see details
LUSC -0.237 0.1 -0.305 0.05 31 Click to see details
LIHC 0.219 0.13 0.181 0.17 29 Click to see details
KICH 0.27 0.19 0.643 0.01 13 Click to see details
ESCA 0.82 0.19 0.500 0.33 3 Click to see details
UCEC 0.326 0.3 0.300 0.31 5 Click to see details
LUAD -0.165 0.3 0.140 0.33 12 Click to see details
PRAD -0.19 0.38 -0.100 0.44 5 Click to see details
CHOL 0.211 0.39 0.600 0.2 4 Click to see details
KIRP -0.04 0.45 0.217 0.25 12 Click to see details
KIRC -0.03 0.47 -0.100 0.4 9 Click to see details
KIRC -0.03 0.47 -0.100 0.4 9 Click to see details
KIRC -0.03 0.47 -0.100 0.4 9 Click to see details
182 hsa-miR-3150b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066803 ARID1A AT-rich interaction domain 1A 2 2
MIRT087964 TNRC6B trinucleotide repeat containing 6B 2 4
MIRT112200 BTG2 BTG anti-proliferation factor 2 2 2
MIRT115553 MAZ MYC associated zinc finger protein 2 2
MIRT119127 SPOPL speckle type BTB/POZ protein like 2 2
MIRT153910 NCOA3 nuclear receptor coactivator 3 2 2
MIRT187986 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT240368 RAB2A RAB2A, member RAS oncogene family 2 2
MIRT249675 SLC39A9 solute carrier family 39 member 9 2 4
MIRT267540 C1ORF226 chromosome 1 open reading frame 226 2 2
MIRT282540 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT319703 UBN2 ubinuclein 2 2 2
MIRT373666 POU2F1 POU class 2 homeobox 1 2 2
MIRT390213 GNAI2 G protein subunit alpha i2 2 4
MIRT444379 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT445600 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT445635 TMEM50A transmembrane protein 50A 2 2
MIRT447181 PGRMC2 progesterone receptor membrane component 2 2 2
MIRT447212 APBB2 amyloid beta precursor protein binding family B member 2 2 2
MIRT447247 IHH indian hedgehog 2 2
MIRT447809 EMX1 empty spiracles homeobox 1 2 2
MIRT447829 CTIF cap binding complex dependent translation initiation factor 2 2
MIRT449181 LUC7L3 LUC7 like 3 pre-mRNA splicing factor 2 2
MIRT451253 ZNF444 zinc finger protein 444 2 2
MIRT451378 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451526 C16orf58 chromosome 16 open reading frame 58 2 2
MIRT451700 C1RL complement C1r subcomponent like 2 2
MIRT453643 SLC4A2 solute carrier family 4 member 2 2 2
MIRT454417 SEPT6 septin 6 2 2
MIRT454636 FAM83H family with sequence similarity 83 member H 2 2
MIRT454889 RAD50 RAD50 double strand break repair protein 2 2
MIRT455298 BCL2L1 BCL2 like 1 2 2
MIRT455521 C6orf106 chromosome 6 open reading frame 106 2 2
MIRT455937 SURF6 surfeit 6 2 2
MIRT456133 SAMD10 sterile alpha motif domain containing 10 2 2
MIRT456325 ARHGEF2 Rho/Rac guanine nucleotide exchange factor 2 2 2
MIRT457301 ZBTB45 zinc finger and BTB domain containing 45 2 2
MIRT457461 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457533 ZMAT5 zinc finger matrin-type 5 2 2
MIRT457797 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457917 ZNF212 zinc finger protein 212 2 2
MIRT457936 LCE1A late cornified envelope 1A 2 2
MIRT458914 DNM2 dynamin 2 2 4
MIRT459075 WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 2 2
MIRT459484 CCL11 C-C motif chemokine ligand 11 2 2
MIRT459774 IDH3A isocitrate dehydrogenase 3 (NAD(+)) alpha 2 2
MIRT460317 SH3RF1 SH3 domain containing ring finger 1 2 2
MIRT460697 RNF157 ring finger protein 157 2 2
MIRT462049 HOXC13 homeobox C13 2 2
MIRT462156 IGFBP5 insulin like growth factor binding protein 5 2 4
MIRT463293 ZFP91 ZFP91 zinc finger protein 2 2
MIRT463803 XPOT exportin for tRNA 2 2
MIRT463895 WNT7B Wnt family member 7B 2 2
MIRT463942 WIZ widely interspaced zinc finger motifs 2 2
MIRT464660 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 4
MIRT465664 TNPO2 transportin 2 2 2
MIRT465923 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 4
MIRT466003 TMEM189 transmembrane protein 189 2 4
MIRT466824 STX6 syntaxin 6 2 6
MIRT467652 SLC7A1 solute carrier family 7 member 1 2 2
MIRT467820 SLC29A2 solute carrier family 29 member 2 2 2
MIRT468743 SDC2 syndecan 2 2 2
MIRT468793 SBK1 SH3 domain binding kinase 1 2 4
MIRT469989 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT471352 PEG10 paternally expressed 10 2 2
MIRT472016 NPTXR neuronal pentraxin receptor 2 2
MIRT472255 NFIC nuclear factor I C 2 2
MIRT473114 MLXIP MLX interacting protein 2 2
MIRT473725 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT474006 LRRC20 leucine rich repeat containing 20 2 2
MIRT474644 KLF16 Kruppel like factor 16 2 2
MIRT477420 EN2 engrailed homeobox 2 2 2
MIRT477724 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 2 2
MIRT479574 CDC42SE1 CDC42 small effector 1 2 2
MIRT480428 C17orf85 nuclear cap binding subunit 3 2 2
MIRT480439 C17orf49 chromosome 17 open reading frame 49 2 2
MIRT480650 BSCL2 BSCL2, seipin lipid droplet biogenesis associated 2 2
MIRT480984 BBC3 BCL2 binding component 3 2 2
MIRT481061 BASP1 brain abundant membrane attached signal protein 1 2 2
MIRT481257 ATXN7L3 ataxin 7 like 3 2 2
MIRT481494 ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 2 8
MIRT482034 AMER1 APC membrane recruitment protein 1 2 2
MIRT482663 FAM195B MAPK regulated corepressor interacting protein 1 2 4
MIRT482681 NXN nucleoredoxin 2 4
MIRT482710 XRCC3 X-ray repair cross complementing 3 2 2
MIRT482835 GLI4 GLI family zinc finger 4 2 2
MIRT483324 SLC35C2 solute carrier family 35 member C2 2 4
MIRT483410 SPATA6 spermatogenesis associated 6 2 4
MIRT483591 SLC26A9 solute carrier family 26 member 9 2 2
MIRT483781 CASKIN1 CASK interacting protein 1 2 4
MIRT483819 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT483845 UNC5B unc-5 netrin receptor B 2 4
MIRT483972 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT484083 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 4
MIRT484393 ZNF710 zinc finger protein 710 2 4
MIRT484510 SYT7 synaptotagmin 7 2 2
MIRT484797 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT484858 ZNF70 zinc finger protein 70 2 4
MIRT485397 MRVI1 murine retrovirus integration site 1 homolog 2 8
MIRT485614 FOSL1 FOS like 1, AP-1 transcription factor subunit 2 4
MIRT486168 TLE3 transducin like enhancer of split 3 2 2
MIRT486228 NLRP2 NLR family pyrin domain containing 2 2 2
MIRT486249 FASTK Fas activated serine/threonine kinase 2 2
MIRT486296 KBTBD3 kelch repeat and BTB domain containing 3 2 2
MIRT486384 TIGD5 tigger transposable element derived 5 2 2
MIRT486474 TSC22D1 TSC22 domain family member 1 2 2
MIRT486567 SLC38A4 solute carrier family 38 member 4 2 2
MIRT486615 METTL6 methyltransferase like 6 2 2
MIRT487499 IL1F10 interleukin 1 family member 10 2 4
MIRT487520 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT487929 KCND1 potassium voltage-gated channel subfamily D member 1 2 2
MIRT488047 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT488063 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT488173 PRRC2B proline rich coiled-coil 2B 2 4
MIRT488326 AFF2 AF4/FMR2 family member 2 2 4
MIRT488925 GFRAL GDNF family receptor alpha like 2 2
MIRT489288 RBM8A RNA binding motif protein 8A 2 8
MIRT489483 SLITRK5 SLIT and NTRK like family member 5 2 2
MIRT490460 PROSER2 proline and serine rich 2 2 2
MIRT490563 TEX261 testis expressed 261 2 4
MIRT490843 ADD2 adducin 2 2 2
MIRT491355 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT491455 HOXB5 homeobox B5 2 2
MIRT491585 USB1 U6 snRNA biogenesis phosphodiesterase 1 2 2
MIRT492735 PHF12 PHD finger protein 12 2 2
MIRT493053 MYO1C myosin IC 2 4
MIRT493603 HMGB3 high mobility group box 3 2 6
MIRT493686 HAP1 huntingtin associated protein 1 2 2
MIRT493793 GATA6 GATA binding protein 6 2 2
MIRT493881 FAM73B mitoguardin 2 2 4
MIRT494238 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT494512 BDNF-AS BDNF antisense RNA 2 2
MIRT494717 ARHGAP31 Rho GTPase activating protein 31 2 2
MIRT494907 UCP2 uncoupling protein 2 2 2
MIRT498832 ZNF561 zinc finger protein 561 2 2
MIRT498921 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT498949 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT499551 C15orf43 telomere repeat binding bouquet formation protein 2 2 2
MIRT501370 REXO1 RNA exonuclease 1 homolog 2 4
MIRT511910 FKBP1A FK506 binding protein 1A 2 2
MIRT512594 ZNF783 zinc finger family member 783 2 2
MIRT513339 CDK2 cyclin dependent kinase 2 2 4
MIRT513729 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT527702 IL17REL interleukin 17 receptor E like 2 2
MIRT533488 TRIM71 tripartite motif containing 71 2 2
MIRT533680 TMEM86A transmembrane protein 86A 2 2
MIRT534167 SLC8A1 solute carrier family 8 member A1 2 2
MIRT537885 EDA2R ectodysplasin A2 receptor 2 2
MIRT538548 CELF1 CUGBP Elav-like family member 1 2 2
MIRT552014 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT555336 PPP1R3B protein phosphatase 1 regulatory subunit 3B 2 4
MIRT565155 TUBB2A tubulin beta 2A class IIa 2 2
MIRT568712 TMEM30B transmembrane protein 30B 2 2
MIRT568824 TRIM67 tripartite motif containing 67 2 2
MIRT569459 PIGP phosphatidylinositol glycan anchor biosynthesis class P 2 2
MIRT569589 PRELP proline and arginine rich end leucine rich repeat protein 2 2
MIRT569619 ASTN2 astrotactin 2 2 2
MIRT569826 CRMP1 collapsin response mediator protein 1 2 2
MIRT569985 TMEM184A transmembrane protein 184A 2 2
MIRT570066 CPNE2 copine 2 2 2
MIRT570540 RPH3A rabphilin 3A 2 2
MIRT570729 CELSR2 cadherin EGF LAG seven-pass G-type receptor 2 2 2
MIRT570797 CKAP2L cytoskeleton associated protein 2 like 2 2
MIRT570898 METTL21A methyltransferase like 21A 2 2
MIRT570944 CPE carboxypeptidase E 2 2
MIRT570964 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT571169 ZNF85 zinc finger protein 85 2 2
MIRT573015 RPP25 ribonuclease P and MRP subunit p25 2 2
MIRT573673 HES6 hes family bHLH transcription factor 6 2 2
MIRT574812 EIF1 eukaryotic translation initiation factor 1 2 2
MIRT576755 Tmem127 transmembrane protein 127 2 2
MIRT618157 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT643640 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 2
MIRT649084 CACNA1B calcium voltage-gated channel subunit alpha1 B 2 2
MIRT658378 FAM53C family with sequence similarity 53 member C 2 2
MIRT667955 HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 2 2
MIRT691696 FLOT2 flotillin 2 2 2
MIRT697545 ZBTB44 zinc finger and BTB domain containing 44 2 2
MIRT701530 NDEL1 nudE neurodevelopment protein 1 like 1 2 2
MIRT705766 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT715222 NPVF neuropeptide VF precursor 2 2
MIRT719548 CBLB Cbl proto-oncogene B 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3150b-3p Paclitaxel 36314 NSC125973 approved sensitive High Laryngeal Cancer cell line (Hep2)
hsa-miR-3150b-3p Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PATU8988)
hsa-miR-3150b-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3150b-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-3150b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-3150b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3150b-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (100 ng/ml)
hsa-miR-3150b-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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