miRTarBase - #MIRT447636


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pre-miRNA Information
pre-miRNA hsa-mir-203b   
Genomic Coordinates chr14: 104117418 - 104117503
Description Homo sapiens miR-203b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-203b-3p
Sequence 54| UUGAACUGUUAAGAACCACUGGA |76
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 11 14 - 104117440 28550310 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1444131167 3 dbSNP
rs1307766631 8 dbSNP
rs527418519 12 dbSNP
rs771545143 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol AGPS   
Synonyms ADAP-S, ADAS, ADHAPS, ADPS, ALDHPSY, RCDP3
Description alkylglycerone phosphate synthase
Transcript NM_003659   
Expression
Putative miRNA Targets on AGPS
3'UTR of AGPS
(miRNA target sites are highlighted)		 
>AGPS|NM_003659|3'UTR
   1 ATCCATTAGTACCATTACAAAAAAATGTCAATTTTTTTTTTAAGTTTTCAACTGTGGTTATACTAGTAATCAAATATATC
  81 ATGGACTATATTTTGGATACATTTGTTTCTTTGGTTTAAAATAAGTTTGTTTTCATTCTGTAGTTTGTTTTGTTTCTACA
 161 TCTATGGATTGACAGATAGTATTCCTAAATCTCTCTCATTGTAGGTACATCATTTTACATTCAGCGGTTGTCATTTCAAA
 241 TTTTAGTCAGGCAGCACAAAGCTGTCAATTATTCCAGAGGAAGCTGCTGCCAGCTGTTTTGTATTGTTGCTTCCTCTTGG
 321 GGAACAAAGACAGATTTGGTATCATTGATTGCTCAGCTAGCCTCTTTTTAAAAGAACGTTTCTGGGAATCAGATGTCTAG
 401 GGAAGGATTCCACTGAGGAGTGATACACGTGTACATTGTTTAAGAGCATAGTCTAGTGTGAGTAGGCCATTAAGGGGAAG
 481 GATATTCATGAAAGAATTTAGGCAACCTGTTATTTAGAAAGCCTTCACGTCTGTAAGGTGCTTGGCCTACTTTTTTTTTT
 561 AAATTAGTATACATGCATAAAACCTTGTATCATCAATATACAAATTATTCTGTTAGGGGACATGTTTTTGTTCTCCATGT
 641 TTCTGTTTCTATTGTGGTATGAGTTGTATTTGTATCACTGAGATAACCTATTGTTATATTCTAATTCATTGATAATATGT
 721 TTTGTAAGAAAAGCTGACATCCTTCATTGCAAGTGAAGAACAGGTTTACCATGAAATGAATGCCTTTATTCAACTTAGAG
 801 TCCTAATGTTTCTGATTTCACATTCTTGTTGCTGAAATGCAGAAGAAACAGCTACAGCAAGAGCAGAAGGAAAACTCTTA
 881 GACTTAATGTCTCCAATTGCAAGAATTGTTTCACTAAAGAAACAGTCATCATTCAACTACTGAATTTGAAAGCCTCAGCA
 961 GTTTCAATGACAAAAATCATTTTTGATTTTTTAAAATTAATCCCAATGGCATGATAAATTTTCATATAAAAAGTAAAGTT
1041 TCAATTTAGTTTTTAATAATGGTTTAATGCCTTTTTTGAATAACTGGTTTAACCTAATTTTTTTTAAATGTAATGTATTA
1121 ATGCATATACCATAATCAAAAGTTTGAAATATCCTGTTTCTTAAATAATGAGAACATTAATCACATTTAGCAAGCATTTG
1201 TACATTCAAACCTGGATATTAAAGTGAAATGATTACTTTGAATCACTGTCTGCCAAGGTTCATGATTCACATTTTGAGAT
1281 GGATTCTTTTCTTAATGCAATACCTAACTTTTGATAATTTTTTAAAACTAATATTTGATCAGATAATGTAAGTCAAAATG
1361 CAGACGATCCTTTAAAAGGATGCATTGTCTGTGTATGTAGCAACAGCTCCAAAGTATTTTTGGGCAGTTTGATACCTTTT
1441 ATATCTGAAGTAGCCTTAACCAGAAAAATGGTAATTTAAAATTGACAAAATGATATTTTTAAGACTTCAAAATGATAAAT
1521 AATTTTTAACTATTAAAATTGGCCTCAAACTAATAAATCTGTAATTAAATTAGAATTAAATATCAGTTTAACAACAAAAT
1601 GAAATATTTATTTTTTAGAAGCTGCCTCTCTTCATTGGTCATTTATTTTTAATTATAAAATTTCCAACAGATCTTTGCTT
1681 TAAGCCCTTGATATTTGACCTAGTTGGACACTTGATGAGGAAGTTGCCTCTAGAATTATAAAAATCTCAGCTTTATAAAA
1761 TGCATCTGTTCACGAAGGTAATTTCTTTAATTGGTGATCAAAATATAAAATTAAGGTACTAATGTCTCACTGGAAGTATA
1841 TATATATATATATATATATGTATGCATGTGTGTGTGTGTATATATATATATATATATATGTATATGTTTCTGAGTAATTT
1921 TTAAAAAATAAAACAGGTTAATAAGAAGATCCATTCCTTTGCATGTGATTGTTATAACATTCTTTCCCAGGGAGTTCAAT
2001 TTCAGCAACCTCAGAAATCCATACTTGATATTAGGAAACTGTAAATGTAACACCTGAAATTATTATGTTCACTATTCTAC
2081 ATGAACCTTATGGAAATTCATGATTTATGTCTTTGTTTTTCTTTTTCCAAGTATATGCAGGACTCCCCAACCTTGATTTT
2161 ATAATGGTGACTGCATTTTGTAGGTGGAATCATTTCTACCGAAATCATTTTGAAACACAAGAATATTGATCAGTACTGTT
2241 TCACTCTGATTTAGTAAATCAGAAAGCCTCCCCCTACCCCCAGCCCCCACTTTCACATACCTTCTGGGAGGTGCCTCAGT
2321 ATAGACTTGGTATCTGTGAAGGACTGAGTTCATGAATATGCACAGAAGCACTTAAACCATGCCTCTTATTTCTATAATAT
2401 CTGAAAATGGCTTCATAAAAGTTAAGTCAGGAGAACACTGTTTACATGACACTTCTTAACTCATTTTTAATGTTTATTTT
2481 TAATTTCAAAAACTTGTTGCCTATTTGGTTTTCAGTACTGCATAACACTGACTTTCTTAAATTAGTCATAGTTGCAATAA
2561 TTTACTTAAATTTGGTAATGTCACATTTGGGTTGGGGTTTCAGTGGGAATAGTAACTTGCCGCTAGTGAGAAATGGCATT
2641 GAATACTAAAGACTCAATATGAACAGGCTTTATAGACCCTTAGAGAAACTGTTGCCTTAATGTTTGGTGCAATTTCTAGT
2721 AGTGCATAAGTGAATTTAGTCTTATGATAAGTAACTTTGAGCTGTTTTTAGCTTAGTAAGAATTGTGGAAACCACATGTT
2801 TATTGTGCCCATCATTTTACACAAAGAAAAGAGGATTATATTATTTCTTCTAAGGAAGTAGGAGTTTTCTTCCTAAAAGT
2881 GCTTACATATTGTAGTACTATTACTTAAAAGTTATTTATGAAGTTGGGAGCCTTCTAGTTTGCCTGTGTTGATGTATTTT
2961 GAAAACAAAATTGCAATAAAGGATGAGCTTCCATCGGTGTGTATGGTATACCAGATACAGATGGTTGCAAGGAAACCTTT
3041 TCCCCCACTAGAATAGTCTATTAGTAACTGCTAAGTCCTAGCTTGCATTTTTGAAAATGCCTTTCTGCATGTTAGCACCC
3121 AGACTTTCCTTTGTCATATTCCTTTATAGCTACAACTTAACTGTAGCTTATCAGAGAAGCTCTGTAGTCCTACACTGAAG
3201 TGTGTTCCCTTGGCTGTTCATATGGGGCTGGGTTTGGTTGAACTTCCATTCTGTATAAATGCTAGAACACAGTTACTACA
3281 GATTGATTCACAAACTGCATGTGCTGGTGCTTGAGGCAGCCAAAATGGAATGCTGTGGAAAGCATATCTATATCTTAAAA
3361 AACACTCAGACAGGAGTTAAGGACAGCTTTAATAATTTTTTTGTTTACCACTTAATCTTTATCAACTTTGATTTTAGTTA
3441 GGGCTTAGCTCATGGTTGAAGAAAAGTGGAAAATAACAAGTGCCCATTTAGGTTTGAAGAATCCAGAATGTTTTACCTTT
3521 GACTTTATGAGTTATAGAAGCTTGGCTTTGCTCTAGGCTTCATGTTCCCAAATGAGCCATCTGTCAGTATATTCACTTAA
3601 TTCTTACTAATTTCAGTTTCCTGTAAAGGAAACAACTTACATATTGATGCTTAAATCCAGAAAGTGTAAAAGGTTTTCTT
3681 AAACTGTTAAAATATAGTGTCTGATATAAAGGATGTAAGTTACTCAGCTTTCTGCTCCCTAAGCCAAACAGTGTTTGTCT
3761 TCAGTGTGAAATTTAACTGTAAAAACTACTTGTAATGTCAAGAGATTATAGATCATATTATTAATAAAATGGACCTGGGT
3841 CTAATATTTTTTTTCTTCAAAGGGAGTGTGAAGCTGTTTATTCTTTTATTTGCATATGAGTTTTTCTTTTAGTTTTAGTT
3921 TTTCATGTTCATATTTCCACTGATTTGAAAACACAAAATTTATTTTTATAATTTTGTTGCTTGTAGCATAATCAAGTGCA
4001 AAATCAAGTGCAACCTACTTGTGACTAAATCTCTTTGGATTTATAGCTGAGGATATTGTTAGCTAGGTTTTGTCAATCCC
4081 TAATCATTTTTTAAAATCAATGCTGTATTCCCAGGAGGCTTTGAGACTCCTATGAACCTGAAGCACTCCCTTTTGAACCT
4161 TGGAAGATCCTCAAAGAGTGAGCACTCTTGTGCTCTTCTAATCATAATTAATTCCTTAACAAATCAGAGTAAGGACCACT
4241 GACATATAGAACCCTCAAGCCAAAGAACCATCACAGAATTTAGTAACTTTAGTTCTGTGAACATGAAAAGATTTCTTTTT
4321 TGGTTTCCAAAGGAGATTATTTATTTTTCCACAAGGAAAAACATCTTGCAGAGACTCTGAATTCCAAATCTGAGTGAGAA
4401 AGAAAAGGAAAAAAATCTGTTTCATGGTGGATTTCTAAGCAACATATATACATGTTTTTAAGACAACCTTTTGTTGGCAG
4481 TGTTTTTCCTGAACACCATATGCACCCTAGGAAACATGTTTTTCCTTTAATCTTGTTCACATATCAGAAAAGGACATGAA
4561 ATGCTCATACTGGCATACAAGTTTCTATAAGTAGTTATTTTTTGAGCTACTTATACTATATCCCCAAAAGCTCACAGTGC
4641 CTTGTTGGGATTTTTTTTTTCCATGAACTAGCCATTATTTTAAATGAGTGGGAGAGGGTAAGTCTTTAGACAGAGGTCAT
4721 TCAGCAGTTCAAGACTATTCCTCTTCAAGAACATGTCAGGAATTAAGCAGTTATATGTGGAAACACTGGTAATTCTTTCC
4801 ACAGTGTTGTTTTGGATAATCTGTTCTAGTATATTTAACTAATTGTATGGTGGACCTGTACTCTGATACACATCGAATCA
4881 GTCAATGGGATTTGTATGTGCTTTTCCTTCCTACATTTTCATTCCTACTGCCCCAACCTAGTAGCCCTAAGTTGTGGCTT
4961 GGTGGGTTTGGCATTGAGCCTCAAGACACTCACTACATTCTTTCTGGATGTTTGCTCACAGGCTCCCTGAGGAGCAGAAC
5041 CTGTGGAGCTGGGGAGTGCGGGTGGTTTCTATTCCTAATATTGTGTGTCAGTCCTTTTTCGTGTGATGGTGCCTTCAGAA
5121 TAACGAATATTTCTGTTCTGGACAATGATTAAATCTTATGAGAAATATATGTAGGTTATATTAATTCTTGTCCATTTTTG
5201 CTAAGCCTGTGAAATACTTTGGCTCTGATACAACTTAACTTGAATAATATCTTATCCTGAGTCTTCCTCCAAGGCAGTAC
5281 ATATTCCTGCCAGGACTGTAGTAATCCTTTGGGAACTACATGTGAGTAAGCACTTGTATGTAAGCCATTATACTGCTGTA
5361 ACTAATGCATACAAACAATTCTTCTCTTTACATTTATAGTCTAAAAGGGGATATGCAGTGGGAAGGAAAATTCCTGAGAG
5441 ATTCCAGCATAGCTTTGTCAATTCCGACTGAGCCATACTGTTTTCCACAAGGGCTCAACACATAGTCAGTATTCCGTGCT
5521 TTCAGTGTGTGTTCAGATTCTCCTCTTACTGGTTTTCTTAGACTGTATTGTTCTATAAGCAAATGCCCATGTGTGATTTT
5601 TAAGATGTGCTGGGGAAAAATAAATCAATACCACAACCACCAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agGUCACCAAGAA-UUGUCAAGUu 5'
            ||| |||  || |:||||||| 
Target 5' gaCAGAGGTCATTCAGCAGTTCAa 3'
 4709 - 4732 169.00 -18.20
2 
miRNA  3' aggUCAC-CAA--GAAUUGUCAAGUu 5'
             |||| |||  |||::| ||||| 
Target 5' tgaAGTGTGTTCCCTTGGCTGTTCAt 3'
 3196 - 3221 142.00 -15.40
3 
miRNA  3' aggUCACCAAGAAUUGUCAAGUu 5'
             |||  ||:| ::|||||:: 
Target 5' caaAGTATTTTTGGGCAGTTTGa 3'
 1410 - 1432 132.00 -8.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
332525 119 ClinVar
332526 166 ClinVar
332527 207 ClinVar
893938 362 ClinVar
332528 378 ClinVar
893939 378 ClinVar
332529 379 ClinVar
893940 386 ClinVar
332530 429 ClinVar
332531 464 ClinVar
332532 470 ClinVar
332533 514 ClinVar
332534 553 ClinVar
332535 561 ClinVar
332536 642 ClinVar
332537 684 ClinVar
894329 732 ClinVar
894330 795 ClinVar
894331 824 ClinVar
332538 866 ClinVar
332539 922 ClinVar
332540 948 ClinVar
892882 1074 ClinVar
332541 1098 ClinVar
332542 1106 ClinVar
332543 1107 ClinVar
892883 1239 ClinVar
892884 1313 ClinVar
332544 1365 ClinVar
893694 1425 ClinVar
893695 1470 ClinVar
332545 1629 ClinVar
332546 1702 ClinVar
332547 1713 ClinVar
893696 1720 ClinVar
893697 1745 ClinVar
332548 1812 ClinVar
332549 1813 ClinVar
332550 1836 ClinVar
332551 1837 ClinVar
332552 1837 ClinVar
332553 1859 ClinVar
893698 1859 ClinVar
332554 1861 ClinVar
332555 1861 ClinVar
893699 1861 ClinVar
332556 1863 ClinVar
332557 1866 ClinVar
893964 1866 ClinVar
332558 1867 ClinVar
332559 1867 ClinVar
332560 1868 ClinVar
893965 1870 ClinVar
332561 1877 ClinVar
332562 1877 ClinVar
332563 1879 ClinVar
332564 1879 ClinVar
332565 1879 ClinVar
893966 1881 ClinVar
893967 1883 ClinVar
332566 1885 ClinVar
332567 2089 ClinVar
332568 2092 ClinVar
894364 2312 ClinVar
894365 2319 ClinVar
332569 2438 ClinVar
332570 2456 ClinVar
332571 2488 ClinVar
332572 2549 ClinVar
332573 2583 ClinVar
332574 2622 ClinVar
332575 2637 ClinVar
332576 2668 ClinVar
332577 2731 ClinVar
892922 2834 ClinVar
332578 3046 ClinVar
332579 3061 ClinVar
332580 3074 ClinVar
332581 3263 ClinVar
332582 3382 ClinVar
893730 3525 ClinVar
332583 3559 ClinVar
332584 3607 ClinVar
332585 3847 ClinVar
893731 3895 ClinVar
332586 3907 ClinVar
893996 3932 ClinVar
332587 3954 ClinVar
893997 3972 ClinVar
332588 3978 ClinVar
893998 4057 ClinVar
332589 4099 ClinVar
893999 4101 ClinVar
332590 4133 ClinVar
894405 4229 ClinVar
332591 4233 ClinVar
332592 4254 ClinVar
894406 4256 ClinVar
332593 4516 ClinVar
332594 4619 ClinVar
894407 4626 ClinVar
332595 4651 ClinVar
894408 4675 ClinVar
892959 4781 ClinVar
892960 4789 ClinVar
332596 4822 ClinVar
332597 4886 ClinVar
332598 4911 ClinVar
332599 4975 ClinVar
332600 4997 ClinVar
332601 5024 ClinVar
332602 5027 ClinVar
332603 5073 ClinVar
332604 5125 ClinVar
332605 5156 ClinVar
332606 5160 ClinVar
332607 5454 ClinVar
332608 5466 ClinVar
332609 5507 ClinVar
332610 5610 ClinVar
COSN31544246 4 COSMIC
COSN30167869 23 COSMIC
COSN26965495 26 COSMIC
COSN30448630 30 COSMIC
COSN20068682 42 COSMIC
COSN30102379 46 COSMIC
COSN31505972 50 COSMIC
COSN31509233 52 COSMIC
COSN30148082 81 COSMIC
COSN26766862 85 COSMIC
COSN31574248 125 COSMIC
COSN23747985 129 COSMIC
COSN30378229 196 COSMIC
COSN1808464 267 COSMIC
COSN28201509 378 COSMIC
COSN17375193 379 COSMIC
COSN30222673 505 COSMIC
COSN15888102 561 COSMIC
COSN29773603 561 COSMIC
COSN21204907 783 COSMIC
COSN32165603 820 COSMIC
COSN26192915 1581 COSMIC
COSN15661285 1767 COSMIC
COSN20097420 1815 COSMIC
COSN27512455 1860 COSMIC
COSN17494775 1861 COSMIC
COSN17490503 1870 COSMIC
COSN28201679 1883 COSMIC
COSN20097422 1897 COSMIC
COSN9118334 1905 COSMIC
COSN1808465 2018 COSMIC
COSN29258374 2295 COSMIC
COSN31961751 2656 COSMIC
COSN6155985 2924 COSMIC
COSN26375586 3272 COSMIC
COSN27126573 3798 COSMIC
COSN20097425 3855 COSMIC
COSN17777611 3887 COSMIC
COSN20097429 3918 COSMIC
COSN22411092 4527 COSMIC
COSN29689039 4661 COSMIC
COSN19279267 4669 COSMIC
COSN21877870 4778 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs762195351 4 dbSNP
rs898393786 7 dbSNP
rs1464499898 9 dbSNP
rs572709727 16 dbSNP
rs1283058976 18 dbSNP
rs754563305 19 dbSNP
rs375516825 20 dbSNP
rs1047165666 24 dbSNP
rs541733709 27 dbSNP
rs1162386058 30 dbSNP
rs751739338 32 dbSNP
rs752196210 32 dbSNP
rs780791158 32 dbSNP
rs1286476730 33 dbSNP
rs1367536319 39 dbSNP
rs755204376 43 dbSNP
rs781599392 51 dbSNP
rs558495183 61 dbSNP
rs1344712804 62 dbSNP
rs540821901 76 dbSNP
rs550112836 77 dbSNP
rs1280678925 78 dbSNP
rs1390537816 79 dbSNP
rs1018041399 80 dbSNP
rs576870801 87 dbSNP
rs1415503694 91 dbSNP
rs1183548633 98 dbSNP
rs1472817361 99 dbSNP
rs187686783 119 dbSNP
rs1295263756 132 dbSNP
rs1466018124 152 dbSNP
rs28434417 153 dbSNP
rs1269154678 156 dbSNP
rs1335636619 158 dbSNP
rs1213383656 159 dbSNP
rs886055169 166 dbSNP
rs193236784 167 dbSNP
rs1292590659 174 dbSNP
rs891192747 178 dbSNP
rs1287408652 190 dbSNP
rs1021825953 192 dbSNP
rs1205004264 194 dbSNP
rs1437535454 200 dbSNP
rs74536999 207 dbSNP
rs898458998 209 dbSNP
rs1439825400 212 dbSNP
rs1471600658 220 dbSNP
rs995514678 221 dbSNP
rs1027563630 223 dbSNP
rs541943721 225 dbSNP
rs928619500 226 dbSNP
rs894430404 227 dbSNP
rs559148057 228 dbSNP
rs1248200478 230 dbSNP
rs960040297 233 dbSNP
rs1467387114 237 dbSNP
rs1248859903 245 dbSNP
rs539333294 247 dbSNP
rs1472229078 251 dbSNP
rs561536795 254 dbSNP
rs781415904 269 dbSNP
rs1302899718 290 dbSNP
rs1388979988 295 dbSNP
rs971647882 320 dbSNP
rs527531135 323 dbSNP
rs977171975 335 dbSNP
rs1031393612 337 dbSNP
rs1411970251 339 dbSNP
rs942148579 342 dbSNP
rs1038592279 347 dbSNP
rs1309071911 362 dbSNP
rs919806857 368 dbSNP
rs1295128540 370 dbSNP
rs112754713 378 dbSNP
rs886055170 379 dbSNP
rs750988631 385 dbSNP
rs114266155 386 dbSNP
rs1172595857 389 dbSNP
rs1452244380 391 dbSNP
rs987472469 403 dbSNP
rs1007917489 409 dbSNP
rs1480515327 417 dbSNP
rs549927919 418 dbSNP
rs940185524 419 dbSNP
rs574178840 429 dbSNP
rs1232354171 430 dbSNP
rs1011351837 436 dbSNP
rs1302249516 445 dbSNP
rs898614414 447 dbSNP
rs1372377740 455 dbSNP
rs1286340205 464 dbSNP
rs886055171 464 dbSNP
rs1411628089 469 dbSNP
rs3171913 470 dbSNP
rs1481995752 478 dbSNP
rs903386402 481 dbSNP
rs1464230625 502 dbSNP
rs1212955843 513 dbSNP
rs886055172 514 dbSNP
rs149650155 515 dbSNP
rs1418820894 527 dbSNP
rs566656122 529 dbSNP
rs555868086 530 dbSNP
rs3171912 550 dbSNP
rs1024658425 551 dbSNP
rs1473236353 551 dbSNP
rs115060780 553 dbSNP
rs1208734368 559 dbSNP
rs867873949 561 dbSNP
rs1256758261 562 dbSNP
rs1475571753 570 dbSNP
rs973544908 572 dbSNP
rs1169622310 574 dbSNP
rs535242971 587 dbSNP
rs919719113 590 dbSNP
rs1428327165 597 dbSNP
rs1230142408 609 dbSNP
rs1351106250 623 dbSNP
rs1292606448 624 dbSNP
rs1393735754 634 dbSNP
rs886055173 642 dbSNP
rs1054270 647 dbSNP
rs1303031784 655 dbSNP
rs758819601 658 dbSNP
rs957144277 665 dbSNP
rs1161908174 666 dbSNP
rs749195776 684 dbSNP
rs1027917846 691 dbSNP
rs1395499327 692 dbSNP
rs558457632 699 dbSNP
rs1425593035 719 dbSNP
rs578255875 722 dbSNP
rs1451790117 723 dbSNP
rs185715744 732 dbSNP
rs1328418391 739 dbSNP
rs1436091680 743 dbSNP
rs1186126153 752 dbSNP
rs1463758738 762 dbSNP
rs1266007191 765 dbSNP
rs1210293631 767 dbSNP
rs555871792 788 dbSNP
rs1329624011 789 dbSNP
rs1039371238 792 dbSNP
rs868248667 794 dbSNP
rs912813369 795 dbSNP
rs1322973304 797 dbSNP
rs774003780 801 dbSNP
rs576029467 806 dbSNP
rs144386872 807 dbSNP
rs187354423 824 dbSNP
rs1344283886 835 dbSNP
rs1198219902 840 dbSNP
rs1394242362 846 dbSNP
rs1161946514 855 dbSNP
rs192109711 861 dbSNP
rs2293470 866 dbSNP
rs1169918818 868 dbSNP
rs1187561428 875 dbSNP
rs1250074365 875 dbSNP
rs375958660 877 dbSNP
rs1189483975 889 dbSNP
rs564010429 894 dbSNP
rs368328888 895 dbSNP
rs183835467 897 dbSNP
rs550082540 898 dbSNP
rs1489460153 899 dbSNP
rs1265964977 900 dbSNP
rs1225986623 904 dbSNP
rs916560285 904 dbSNP
rs1339476855 909 dbSNP
rs555058166 922 dbSNP
rs896053148 940 dbSNP
rs886055174 948 dbSNP
rs1045645304 959 dbSNP
rs907156006 960 dbSNP
rs771625568 966 dbSNP
rs1322053565 968 dbSNP
rs1389031149 973 dbSNP
rs563418811 979 dbSNP
rs1013161223 981 dbSNP
rs1022910823 993 dbSNP
rs1427849702 994 dbSNP
rs963416262 1002 dbSNP
rs1169439198 1005 dbSNP
rs1454041391 1009 dbSNP
rs1363343502 1019 dbSNP
rs973854852 1030 dbSNP
rs1442799456 1036 dbSNP
rs1196395183 1040 dbSNP
rs1453125551 1045 dbSNP
rs1267913050 1050 dbSNP
rs892986587 1066 dbSNP
rs1481767581 1069 dbSNP
rs1011258084 1072 dbSNP
rs1026415952 1074 dbSNP
rs1343939345 1089 dbSNP
rs1272722068 1091 dbSNP
rs1008342214 1098 dbSNP
rs1332067559 1098 dbSNP
rs574941020 1098 dbSNP
rs886055175 1098 dbSNP
rs78482263 1099 dbSNP
rs1019860799 1100 dbSNP
rs1372469530 1102 dbSNP
rs188611962 1106 dbSNP
rs116688077 1107 dbSNP
rs180744021 1108 dbSNP
rs1329274495 1110 dbSNP
rs535204367 1111 dbSNP
rs1265824354 1115 dbSNP
rs371864584 1120 dbSNP
rs1469578637 1121 dbSNP
rs975361276 1123 dbSNP
rs184380875 1124 dbSNP
rs1181338530 1125 dbSNP
rs1471603791 1128 dbSNP
rs920897913 1129 dbSNP
rs1182186262 1132 dbSNP
rs947076346 1133 dbSNP
rs990861834 1142 dbSNP
rs1043177263 1152 dbSNP
rs571905814 1154 dbSNP
rs537337167 1156 dbSNP
rs1197403112 1167 dbSNP
rs760284519 1169 dbSNP
rs1457809579 1186 dbSNP
rs1158589964 1189 dbSNP
rs1386710394 1195 dbSNP
rs1227086106 1197 dbSNP
rs1057226906 1199 dbSNP
rs1463275173 1201 dbSNP
rs896019008 1205 dbSNP
rs1352792445 1206 dbSNP
rs1013085478 1210 dbSNP
rs1289534990 1211 dbSNP
rs1044629280 1216 dbSNP
rs1389768183 1217 dbSNP
rs1384965894 1218 dbSNP
rs1046857390 1236 dbSNP
rs899137263 1239 dbSNP
rs763675225 1245 dbSNP
rs1052984858 1246 dbSNP
rs1455449195 1250 dbSNP
rs1414020820 1254 dbSNP
rs543857447 1258 dbSNP
rs1472156447 1266 dbSNP
rs1235287534 1271 dbSNP
rs1026764532 1286 dbSNP
rs1227225618 1290 dbSNP
rs892933063 1304 dbSNP
rs1442707477 1305 dbSNP
rs1247033355 1318 dbSNP
rs1207149427 1329 dbSNP
rs947231270 1332 dbSNP
rs1336406281 1339 dbSNP
rs950814495 1341 dbSNP
rs1049483656 1344 dbSNP
rs1009026875 1349 dbSNP
rs1007875432 1353 dbSNP
rs1266355194 1361 dbSNP
rs144780787 1365 dbSNP
rs1208473222 1366 dbSNP
rs965215583 1382 dbSNP
rs1159776791 1386 dbSNP
rs1404746370 1387 dbSNP
rs994395555 1388 dbSNP
rs1473241228 1396 dbSNP
rs1472846085 1402 dbSNP
rs1389114411 1404 dbSNP
rs1186315249 1405 dbSNP
rs975289225 1425 dbSNP
rs1249085247 1427 dbSNP
rs530379106 1435 dbSNP
rs780604253 1450 dbSNP
rs921201802 1452 dbSNP
rs1292648972 1454 dbSNP
rs1228907021 1468 dbSNP
rs575901515 1474 dbSNP
rs1341573533 1475 dbSNP
rs748254302 1478 dbSNP
rs1230942878 1491 dbSNP
rs969067822 1493 dbSNP
rs1476278503 1515 dbSNP
rs557355492 1517 dbSNP
rs1435499724 1525 dbSNP
rs982233887 1533 dbSNP
rs924311249 1542 dbSNP
rs934419372 1545 dbSNP
rs1456175520 1558 dbSNP
rs1299723731 1560 dbSNP
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rs1056814394 1562 dbSNP
rs552160004 1570 dbSNP
rs948906165 1584 dbSNP
rs1044596127 1585 dbSNP
rs376514949 1586 dbSNP
rs947218400 1593 dbSNP
rs1482753560 1595 dbSNP
rs1272638935 1599 dbSNP
rs1050048664 1605 dbSNP
rs1343051353 1607 dbSNP
rs1300857636 1609 dbSNP
rs899403793 1627 dbSNP
rs535440679 1629 dbSNP
rs1047723397 1634 dbSNP
rs896784378 1640 dbSNP
rs1369386832 1659 dbSNP
rs886472978 1668 dbSNP
rs1008954701 1670 dbSNP
rs1277302095 1672 dbSNP
rs1354695788 1674 dbSNP
rs1174944975 1685 dbSNP
rs888726597 1691 dbSNP
rs1483631589 1692 dbSNP
rs1019045037 1701 dbSNP
rs189318576 1702 dbSNP
rs996697375 1703 dbSNP
rs1184359787 1705 dbSNP
rs1024196951 1706 dbSNP
rs1483434607 1711 dbSNP
rs143451487 1713 dbSNP
rs886055176 1713 dbSNP
rs982565057 1714 dbSNP
rs182366015 1720 dbSNP
rs968660067 1743 dbSNP
rs540754346 1745 dbSNP
rs1172182649 1760 dbSNP
rs914470219 1766 dbSNP
rs1349724888 1767 dbSNP
rs1286395525 1774 dbSNP
rs1390573307 1775 dbSNP
rs1373468585 1778 dbSNP
rs947320560 1780 dbSNP
rs147907023 1783 dbSNP
rs1428972057 1786 dbSNP
rs985407085 1789 dbSNP
rs924263676 1792 dbSNP
rs1166677623 1796 dbSNP
rs1377245902 1797 dbSNP
rs1410331113 1807 dbSNP
rs138605667 1812 dbSNP
rs1438366213 1813 dbSNP
rs61052002 1813 dbSNP
rs955708712 1813 dbSNP
rs1448097939 1816 dbSNP
rs992512928 1816 dbSNP
rs1180320735 1820 dbSNP
rs1484398234 1830 dbSNP
rs1301813921 1833 dbSNP
rs1491400325 1835 dbSNP
rs1491221604 1836 dbSNP
rs886055177 1836 dbSNP
rs1328249075 1837 dbSNP
rs1337003129 1837 dbSNP
rs1386954587 1837 dbSNP
rs373957026 1837 dbSNP
rs376716900 1837 dbSNP
rs917009416 1837 dbSNP
rs1383568602 1838 dbSNP
rs1300204758 1839 dbSNP
rs1343348529 1840 dbSNP
rs1454814808 1840 dbSNP
rs1367960261 1841 dbSNP
rs911020261 1841 dbSNP
rs1425649520 1843 dbSNP
rs1273076469 1844 dbSNP
rs1188202651 1845 dbSNP
rs1314520720 1845 dbSNP
rs1246020633 1853 dbSNP
rs559743168 1857 dbSNP
rs886055179 1858 dbSNP
rs1491423082 1859 dbSNP
rs868072755 1859 dbSNP
rs886055180 1859 dbSNP
rs886055178 1860 dbSNP
rs943886781 1860 dbSNP
rs62182697 1861 dbSNP
rs886055181 1861 dbSNP
rs886055182 1861 dbSNP
rs1168177319 1862 dbSNP
rs1190777845 1863 dbSNP
rs886055183 1863 dbSNP
rs1248366215 1865 dbSNP
rs1266534191 1866 dbSNP
rs62182698 1866 dbSNP
rs761041008 1866 dbSNP
rs10930795 1867 dbSNP
rs1491154667 1867 dbSNP
rs1491345654 1867 dbSNP
rs1491299879 1868 dbSNP
rs886055185 1868 dbSNP
rs58814309 1870 dbSNP
rs1330920332 1873 dbSNP
rs1186498222 1875 dbSNP
rs1389085385 1877 dbSNP
rs1396798477 1877 dbSNP
rs886055186 1877 dbSNP
rs886055187 1877 dbSNP
rs1346218205 1878 dbSNP
rs1196645530 1879 dbSNP
rs1307574161 1879 dbSNP
rs1462273409 1879 dbSNP
rs59535792 1879 dbSNP
rs762185636 1879 dbSNP
rs770843718 1879 dbSNP
rs886055188 1879 dbSNP
rs886055189 1879 dbSNP
rs886055184 1880 dbSNP
rs58369399 1881 dbSNP
rs1174671715 1882 dbSNP
rs1132025 1883 dbSNP
rs886055190 1885 dbSNP
rs1481799628 1887 dbSNP
rs187422259 1895 dbSNP
rs1196057408 1897 dbSNP
rs930902138 1897 dbSNP
rs1344727625 1898 dbSNP
rs1320850653 1899 dbSNP
rs1364068484 1903 dbSNP
rs543345877 1907 dbSNP
rs1324818171 1912 dbSNP
rs1434804172 1913 dbSNP
rs1295945343 1918 dbSNP
rs1288290412 1923 dbSNP
rs1048458159 1926 dbSNP
rs1370269402 1937 dbSNP
rs1329760967 1940 dbSNP
rs1395723021 1943 dbSNP
rs563600280 1950 dbSNP
rs1170523611 1954 dbSNP
rs564760814 1958 dbSNP
rs1048120163 1964 dbSNP
rs944710089 1976 dbSNP
rs1471307175 1988 dbSNP
rs1277942599 1992 dbSNP
rs1040454746 2000 dbSNP
rs1012891835 2039 dbSNP
rs1441559070 2042 dbSNP
rs900568134 2066 dbSNP
rs1310547595 2067 dbSNP
rs996299475 2068 dbSNP
rs1028147225 2075 dbSNP
rs529240564 2089 dbSNP
rs16865338 2092 dbSNP
rs1003750085 2096 dbSNP
rs1227140264 2112 dbSNP
rs1000079321 2121 dbSNP
rs1031041612 2123 dbSNP
rs1248250672 2131 dbSNP
rs1244162755 2138 dbSNP
rs1032024053 2142 dbSNP
rs1478284064 2143 dbSNP
rs1338863573 2149 dbSNP
rs1336425030 2151 dbSNP
rs1190573706 2161 dbSNP
rs1454341555 2162 dbSNP
rs955676101 2168 dbSNP
rs992439366 2181 dbSNP
rs956809627 2186 dbSNP
rs866522284 2187 dbSNP
rs1023949968 2201 dbSNP
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rs1472188092 2211 dbSNP
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rs1185088536 2224 dbSNP
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rs1192102627 2230 dbSNP
rs980293361 2232 dbSNP
rs1449170268 2236 dbSNP
rs953420929 2251 dbSNP
rs985739531 2255 dbSNP
rs911146723 2271 dbSNP
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rs1352006324 2279 dbSNP
rs1318921462 2281 dbSNP
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rs983700151 2311 dbSNP
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rs1424729401 2398 dbSNP
rs1369615874 2411 dbSNP
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rs1052579200 2479 dbSNP
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rs1014166139 2500 dbSNP
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rs1218427186 2504 dbSNP
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rs1285094043 2519 dbSNP
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rs1357391180 2661 dbSNP
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rs909667085 2678 dbSNP
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rs1244684980 2690 dbSNP
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rs771897357 2771 dbSNP
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rs1446600848 2796 dbSNP
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rs1262824563 2885 dbSNP
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rs1490689103 2977 dbSNP
rs1341221247 2981 dbSNP
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rs901861142 2992 dbSNP
rs998066252 2996 dbSNP
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rs951869996 2998 dbSNP
rs1004668136 3002 dbSNP
rs1346184081 3006 dbSNP
rs1228919708 3009 dbSNP
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rs559774883 3028 dbSNP
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rs969193077 3048 dbSNP
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rs745679715 3110 dbSNP
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rs567789925 3119 dbSNP
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rs1296685362 3156 dbSNP
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rs566612430 3160 dbSNP
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rs775330207 3170 dbSNP
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rs1317514975 3280 dbSNP
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rs1158797315 3325 dbSNP
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rs190466352 3382 dbSNP
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rs749900230 4025 dbSNP
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rs183135796 4044 dbSNP
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rs967691732 4095 dbSNP
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rs901542797 4211 dbSNP
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rs1024925532 4334 dbSNP
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rs1199757629 4355 dbSNP
rs896343823 4356 dbSNP
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rs1225413014 4375 dbSNP
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rs1429033030 4481 dbSNP
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rs200085814 4517 dbSNP
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rs1009733910 4661 dbSNP
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rs1002195147 4716 dbSNP
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rs1437657472 4908 dbSNP
rs886055197 4911 dbSNP
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rs922521479 4968 dbSNP
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rs1002908162 5021 dbSNP
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rs1481994518 5080 dbSNP
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rs1314977800 5112 dbSNP
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rs1358902323 5142 dbSNP
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rs1231948296 5155 dbSNP
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rs536424736 5160 dbSNP
rs1422048077 5164 dbSNP
rs1416438624 5166 dbSNP
rs989215522 5172 dbSNP
rs913638202 5175 dbSNP
rs1487650954 5188 dbSNP
rs1260613704 5202 dbSNP
rs997215812 5210 dbSNP
rs1291592697 5217 dbSNP
rs1243051633 5220 dbSNP
rs945150250 5226 dbSNP
rs982242573 5230 dbSNP
rs1030583176 5231 dbSNP
rs776353577 5241 dbSNP
rs928169699 5242 dbSNP
rs1338448350 5243 dbSNP
rs546794768 5250 dbSNP
rs1400916768 5256 dbSNP
rs1005040403 5258 dbSNP
rs938241312 5264 dbSNP
rs1431693084 5272 dbSNP
rs1456173487 5274 dbSNP
rs1329701082 5279 dbSNP
rs747635692 5282 dbSNP
rs769327599 5299 dbSNP
rs888430817 5307 dbSNP
rs1440312523 5310 dbSNP
rs1477215439 5311 dbSNP
rs566705689 5312 dbSNP
rs1195206878 5321 dbSNP
rs1477976147 5332 dbSNP
rs1266200573 5349 dbSNP
rs1034473557 5353 dbSNP
rs1037065265 5363 dbSNP
rs1489643691 5369 dbSNP
rs1266562575 5388 dbSNP
rs538914059 5397 dbSNP
rs558625627 5398 dbSNP
rs992812077 5415 dbSNP
rs1219305849 5416 dbSNP
rs917822852 5426 dbSNP
rs998312497 5427 dbSNP
rs1030164178 5445 dbSNP
rs925070068 5452 dbSNP
rs560420420 5454 dbSNP
rs1344312830 5461 dbSNP
rs1172251247 5465 dbSNP
rs886055199 5466 dbSNP
rs1376740406 5467 dbSNP
rs1196239034 5469 dbSNP
rs1271694341 5496 dbSNP
rs576701982 5500 dbSNP
rs1178399730 5504 dbSNP
rs886055200 5507 dbSNP
rs1260522213 5509 dbSNP
rs1189227280 5512 dbSNP
rs932954753 5516 dbSNP
rs1254495948 5517 dbSNP
rs1445597918 5519 dbSNP
rs1235602234 5530 dbSNP
rs958007294 5534 dbSNP
rs537858923 5541 dbSNP
rs1020615292 5552 dbSNP
rs966423853 5553 dbSNP
rs1451888461 5565 dbSNP
rs1374621932 5568 dbSNP
rs1333239527 5574 dbSNP
rs981832518 5577 dbSNP
rs1446903371 5583 dbSNP
rs1400792879 5590 dbSNP
rs1168513979 5591 dbSNP
rs928114342 5592 dbSNP
rs534633814 5594 dbSNP
rs1395895317 5597 dbSNP
rs60823021 5605 dbSNP
rs1408391069 5606 dbSNP
rs191948308 5610 dbSNP
rs549231830 5627 dbSNP
rs1037965925 5631 dbSNP
rs899322317 5634 dbSNP
rs1441918212 5639 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000264167.4 | 3UTR | UCAAGACUAUUCCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
154 hsa-miR-203b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT063500 SKI SKI proto-oncogene 2 4
MIRT149737 LDLR low density lipoprotein receptor 2 6
MIRT206557 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT248820 SESN2 sestrin 2 2 2
MIRT261314 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT443290 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT443893 NUDT3 nudix hydrolase 3 2 4
MIRT444057 SERPINA4 serpin family A member 4 2 2
MIRT444345 KIAA1211 KIAA1211 2 2
MIRT444538 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT444594 TGFA transforming growth factor alpha 2 2
MIRT445601 SEC14L3 SEC14 like lipid binding 3 2 2
MIRT446025 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT446309 TBC1D8B TBC1 domain family member 8B 2 2
MIRT446492 TMEM215 transmembrane protein 215 2 4
MIRT446728 SLC36A4 solute carrier family 36 member 4 2 2
MIRT447468 CISD2 CDGSH iron sulfur domain 2 2 2
MIRT447504 MRPS5 mitochondrial ribosomal protein S5 2 2
MIRT447597 MRPL3 mitochondrial ribosomal protein L3 2 2
MIRT447636 AGPS alkylglycerone phosphate synthase 2 2
MIRT447846 ZRANB2 zinc finger RANBP2-type containing 2 2 2
MIRT448098 TCN2 transcobalamin 2 2 2
MIRT448111 SEMA4G semaphorin 4G 2 2
MIRT448903 CLCN6 chloride voltage-gated channel 6 2 4
MIRT449396 TOX4 TOX high mobility group box family member 4 2 2
MIRT449484 CACNA2D4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 2 2
MIRT450705 RNF152 ring finger protein 152 2 2
MIRT450781 PAPOLG poly(A) polymerase gamma 2 2
MIRT452856 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT453048 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT459389 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT461156 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461613 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT463711 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 2 8
MIRT464107 VPS35 VPS35, retromer complex component 2 2
MIRT466438 TFAM transcription factor A, mitochondrial 2 2
MIRT467735 SLC36A1 solute carrier family 36 member 1 2 2
MIRT469512 RBFOX2 RNA binding protein, fox-1 homolog 2 2 6
MIRT470026 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT473411 MDM4 MDM4, p53 regulator 2 2
MIRT480545 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT488444 ACBD3 acyl-CoA binding domain containing 3 2 2
MIRT489498 CRLF3 cytokine receptor like factor 3 2 4
MIRT496149 RPS15A ribosomal protein S15a 2 2
MIRT497013 PRDM2 PR/SET domain 2 2 2
MIRT497087 PHF12 PHD finger protein 12 2 2
MIRT508695 MTRNR2L4 MT-RNR2-like 4 2 4
MIRT517468 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT525329 CNGB1 cyclic nucleotide gated channel beta 1 2 2
MIRT527842 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT529111 AQPEP laeverin 1 1
MIRT530163 C11orf44 chromosome 11 open reading frame 44 2 4
MIRT532249 TBPL2 TATA-box binding protein like 2 2 2
MIRT532828 ZNF704 zinc finger protein 704 2 2
MIRT533140 WNT10A Wnt family member 10A 2 2
MIRT536481 KIAA1468 KIAA1468 2 2
MIRT536802 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT537301 FRS2 fibroblast growth factor receptor substrate 2 2 2
MIRT542650 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 2
MIRT545691 NUTF2 nuclear transport factor 2 2 2
MIRT546960 PRR14L proline rich 14 like 2 2
MIRT560566 ZNF460 zinc finger protein 460 2 2
MIRT561792 PAWR pro-apoptotic WT1 regulator 2 2
MIRT562372 ERI2 ERI1 exoribonuclease family member 2 2 2
MIRT569292 SURF6 surfeit 6 2 2
MIRT574090 VASN vasorin 2 2
MIRT619787 HLCS holocarboxylase synthetase 2 2
MIRT620104 HARBI1 harbinger transposase derived 1 2 2
MIRT626003 ZNF517 zinc finger protein 517 2 2
MIRT626375 BBS1 Bardet-Biedl syndrome 1 2 2
MIRT626615 SLC30A6 solute carrier family 30 member 6 2 2
MIRT628381 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT629299 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT630439 IDE insulin degrading enzyme 2 2
MIRT631848 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT633171 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633472 ZNF724P zinc finger protein 724 2 2
MIRT634389 PLSCR1 phospholipid scramblase 1 2 2
MIRT635536 TRIM72 tripartite motif containing 72 2 2
MIRT635818 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT636165 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT636792 CYB5D1 cytochrome b5 domain containing 1 2 2
MIRT637946 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT640317 STAT1 signal transducer and activator of transcription 1 2 2
MIRT645131 HES2 hes family bHLH transcription factor 2 2 2
MIRT645658 ADK adenosine kinase 2 2
MIRT646143 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT646999 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT648183 C2orf68 chromosome 2 open reading frame 68 2 2
MIRT650085 TERF2 telomeric repeat binding factor 2 2 2
MIRT650326 RTN2 reticulon 2 2 2
MIRT651562 WHSC1L1 nuclear receptor binding SET domain protein 3 2 2
MIRT659367 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT659830 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT662103 LACTB lactamase beta 2 4
MIRT664837 HUS1 HUS1 checkpoint clamp component 2 2
MIRT669750 ZNF101 zinc finger protein 101 2 4
MIRT669791 GAN gigaxonin 2 2
MIRT670044 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT670293 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670382 EMP2 epithelial membrane protein 2 2 2
MIRT670950 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 4
MIRT672854 C22orf29 retrotransposon Gag like 10 2 2
MIRT672885 FXN frataxin 2 2
MIRT673994 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT674155 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674495 TIRAP TIR domain containing adaptor protein 2 2
MIRT675461 NUBPL nucleotide binding protein like 2 2
MIRT675669 TMOD2 tropomodulin 2 2 2
MIRT675994 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676069 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676378 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676759 SNX2 sorting nexin 2 2 2
MIRT676893 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT676973 ZNF708 zinc finger protein 708 2 2
MIRT677229 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677363 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT677456 PDLIM3 PDZ and LIM domain 3 2 2
MIRT678073 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678091 ATCAY ATCAY, caytaxin 2 2
MIRT678316 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678411 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678519 ZNF347 zinc finger protein 347 2 2
MIRT678695 TRIP11 thyroid hormone receptor interactor 11 2 2
MIRT678821 PDE6A phosphodiesterase 6A 2 2
MIRT679984 RUNDC1 RUN domain containing 1 2 2
MIRT680608 KIAA0391 KIAA0391 2 2
MIRT680724 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT681238 ZNF383 zinc finger protein 383 2 2
MIRT681932 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682003 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT682500 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 2
MIRT685460 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT688193 FNIP1 folliculin interacting protein 1 2 2
MIRT689666 RBM23 RNA binding motif protein 23 2 2
MIRT691058 CRCP CGRP receptor component 2 2
MIRT691442 CXorf36 chromosome X open reading frame 36 2 2
MIRT695998 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696395 CORO7 coronin 7 2 2
MIRT702334 KLHL7 kelch like family member 7 2 2
MIRT702555 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT703362 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703551 FKBP14 FK506 binding protein 14 2 2
MIRT705029 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT706335 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT708907 TM4SF19 transmembrane 4 L six family member 19 2 2
MIRT711625 CORO1C coronin 1C 2 2
MIRT714444 TOPAZ1 testis and ovary specific PAZ domain containing 1 2 2
MIRT716324 POU5F1 POU class 5 homeobox 1 2 2
MIRT718568 SLC25A22 solute carrier family 25 member 22 2 2
MIRT720299 DDHD1 DDHD domain containing 1 2 2
MIRT721449 AGPAT6 glycerol-3-phosphate acyltransferase 4 2 2
MIRT723529 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 2
MIRT724492 BFAR bifunctional apoptosis regulator 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-203b Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 down-regulated
miR-203b 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Microarray embryos 22921993 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-203b-3p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-203b-3p Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-203b-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-203b-3p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-203b-3p Tamoxifen 2733525 NSC180973 approved sensitive cell line (LCC2)
hsa-miR-203b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CP20)
hsa-miR-203b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-203b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-203b-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-203b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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