miRTarBase - #MIRT448903


—
pre-miRNA Information
pre-miRNA hsa-mir-203b   
Genomic Coordinates chr14: 104117418 - 104117503
Description Homo sapiens miR-203b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-203b-3p
Sequence 54| UUGAACUGUUAAGAACCACUGGA |76
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 11 14 - 104117440 28550310 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1444131167 3 dbSNP
rs1307766631 8 dbSNP
rs527418519 12 dbSNP
rs771545143 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CLCN6   
Synonyms CLC-6
Description chloride voltage-gated channel 6
Transcript NM_001286   
Expression
Putative miRNA Targets on CLCN6
3'UTR of CLCN6
(miRNA target sites are highlighted)		 
>CLCN6|NM_001286|3'UTR
   1 CAGCCCAGCCCACCCTCTCCTGGTGCTGCCTGGGGAGGCAAATCATGCTCACTCCGGCGGGCACAGCTGGCTGGGGCTGT
  81 TCCGGGGCATGGAAGATTCCCAGTCACCCACTCACTCAGAAAGCCGGGAGTCATCGGACACCTTGCTGGTCAGAGGTCCT
 161 GGGGGTGGTTTTGAACCATCAGAGCTTGGACTTTTCTGACTTCCCCAGCAAGGATCTTCCCACTTCCTGCTCCCTGTGTT
 241 CCCACCCTCCAGTGTTGGCACAGGCCCACCCCTGGCTCCACCAGAGCCAGAAGCAGAGGTAGAATCAGGCGGGCCCCGGG
 321 CTGCACTCCGAGCAGTGTTCCTGGCCATCTTTGCTACTTTCCTAGAGAACCCGGCTGTTGCCTTAAATGTGTGAGAGGGA
 401 CTTGGCCAAGGCAAAAGCTGGGGAGATGCCAGTGACAACATACAGTTCATGACTAGGTTTAGGAATTGGGCACTGAGAAA
 481 ATTCTCAATATTTCAGAGAGTCCTTCCCTTATTTGGGACTCTTAACACGGTATCCTCGCTAGTTGGTTTTAAGGGAAACA
 561 CTCTGCTCCTGGGTGTGAGCAGAGGCTCTGGTCTTGCCCTGTGGTTTGACTCTCCTTAGAACCACCGCCCACCAGAAACA
 641 TAAAGGATTAAAATCACACTAATAACCCCTGGATGGTCAATCTGATAATAGGATCAGATTTACGTCTACCCTAATTCTTA
 721 ACATTGCAGCTTTCTCTCCATCTGCAGATTATTCCCAGTCTCCCAGTAACACGTTTCTACCCAGATCCTTTTTCATTTCC
 801 TTAAGTTTTGATCTCCGTCTTCCTGATGAAGCAGGCAGAGCTCAGAGGATCTTGGCATCACCCACCAAAGTTAGCTGAAA
 881 GCAGGGCACTCCTGGATAAAGCAGCTTCACTCAACTCTGGGGAATGCTACCATTTTTTTTCCAAAGTAGAAAGGAAGCAC
 961 TTCTGAGCCAGTGACCACTGAAAGGTATGTGCTATGATAAAGCAGATGGCCTATTTGAGGAAGAGGGTGTCTGCCCTTCA
1041 CAAACACCTCTCTCTCCCCTGCACTAGCTGTCCCAAGCTTACATACAGAGGCCCTTCAGGAGGGCCTCCTGTGCCGCAGG
1121 GAGGGTGCGTGGGGAAGATGCTTCCTGCCAGCACGTGCCTGAAGGTTTCACATGAAGCATGGGAAGCGCACCCTGTCGTT
1201 CAGTGACGTCATTCTTCTCCAGGCTGGCCCGCCCCCTCTGACTAGGCACCCAAAGTGAGCATCTGGGCATTGGGCATTCA
1281 TGCTTATCTTCCCCCACCTTCTACATGGTATTAGTCCCAGCAGGCATCCCTGGGGCAGACGTGCTTTGGCTCAAGATGGC
1361 CTTCATTTACGTTTAGTTTTTTTTAAAACCGTGGAGGTTGCCCACGGGCCTCGGCACCTGGCCCTGGCAGCACAGCTCTC
1441 AGGCCCAGCCCTGGGCGACCTCCTTGGCCAAGTCTGCCTTTCACCCTGGGGTGAGCATCAGTCCTGGCTCTGCTGGTCCA
1521 GATCTTGCGCTCAGCACACTCTAGGGAATAATTCCACTCCAGAGATGGGGCTGCTTCAAGGTCTTTTCTAGCTGATTGTG
1601 GCCCCTCCATTTTCCCCATTTTCTTATCTCCCTGACCAAAATTGCTTTGACTTCTAAATGTTTCTGCTTCCCAGAATGCA
1681 CCTGACTTATGAAATGGGGATAATACTCCCAGGAAATAGCGCAGGACATCACAAGGACCAAAAAGGCAATTCTTATTTAA
1761 ATGTTACTATTTGGCCAGCTGCTGCTGTGTTTTATGGCAGTGTTCAGAGCTTGATCACGTTATTTCTTCCTTTTATTAAG
1841 AAGGAAGCCAATTGTCCAAGTCAGGAGAATGGTGTGATCACCTGTCACAGACACTTTGTCCCCTCTCCCCGCCCCTTCCT
1921 GGAGCTGGCAGAGCTAACGCCCTGCAGGAGGACCCCGGCCTCTCGAGGGCTGGATCAGCAGCCGCCTGCCCTGAGGCTGC
2001 CCCGGTGAATGTTATTGGAATTCATCCCTCGTGCACATCCTGTTGTGTTTAAGTCACCAGATATTTTGTTCCCATCAGTT
2081 TAGCCCAGAGATAGACAGTAGAATGCAAATACCTCCCTCCCCTAAACTGACTGGACGGCTGCCAAGGAGGCCCCAAACCC
2161 AGGCCCCATGCAAAGGCACGTGGTTTCCTTTTCTCCTCTCTCTGCATCTGCGCTTTCCAGATAAGCCCAAAGACAGCAAC
2241 TTCTCCACTCATGACAAATCAACTGTGACCCTCGCTCCTTCCATTTCTGTCCATTAGAAACCAGCCTTTTCAGCATCTCA
2321 CCCATTAGCAGCCCCATCACCCAGTGATCAGTCGCCTCAGTAAAGCAGATCTGTGGATGGGGAGCCTACGGGTGGTAAGA
2401 AGTGGTGTTTTGTGTTTCATCTCCAGCTTGGTGTTCCATGGCCCCTAGGCGAGGTGATCAGGGAGTGGGGCCAATGGGCC
2481 CCCGGCCCTGGCTTTGGGACCTTGTGCTGAGGGATGATTTGCTCCTGACCTTGATTAACTTAACAGTTCCCAGCTGGAAG
2561 GGACACTTTCAGGACCCAGTCCACTGTATGGCATTTGTGATGCAGAATTATGCACTGACATGACCCTGGGTGACAGGAAA
2641 GCCTTTCGAGAGGCCCAAGGTGGCCTCGCCAGCCCTGCAGTATTGATGTGCAGTATTGCACCACAGCTCTGCGGACCTTG
2721 GCCATTGCCGCAGTCGCAGCTTCCTTTTTTCTGTTTGCACTGTTTGTTTGTATGATGTTAGCTAATTCCACTGTGTATAT
2801 AAATTGTATTTTTTTTAATTTGTAAAATGCTATTTTTATTTGAACCTTTGGAACTTGGGAGTTCTCATTGTAACCCTAAC
2881 ATGTGAGAATAAAATGTCTTCTGTCTCCTCTGTCTCCTTTAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' aggucACCAA--GAAUUGUCAAGuu 5'
               || ||  |||||||||||  
Target 5' gacctTGATTAACTTAACAGTTCcc 3'
 2527 - 2551 152.00 -13.96
2 
miRNA  3' agGUCAC-CAAGAAUUGUCAAGUu 5'
            |||||    | | |||||||| 
Target 5' gcCAGTGACAACAT-ACAGTTCAt 3'
 428 - 450 152.00 -19.64
3 
miRNA  3' aggucACCAAGAAUUGUCAAGUu 5'
               | ||||  | |||||:| 
Target 5' atattTTGTTCCCATCAGTTTAg 3'
 2061 - 2083 142.00 -9.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30473013 38 COSMIC
COSN31554498 48 COSMIC
COSN30159051 59 COSMIC
COSN30187725 62 COSMIC
COSN21281691 110 COSMIC
COSN31958422 122 COSMIC
COSN31564758 126 COSMIC
COSN30105270 127 COSMIC
COSN31559615 160 COSMIC
COSN1403421 335 COSMIC
COSN6504691 559 COSMIC
COSN30173105 913 COSMIC
COSN30594846 941 COSMIC
COSN30543387 1071 COSMIC
COSN32064634 1099 COSMIC
COSN21456384 1119 COSMIC
COSN6000425 1222 COSMIC
COSN22296324 1475 COSMIC
COSN21537277 2116 COSMIC
COSN7174008 2137 COSMIC
COSN8635472 2163 COSMIC
COSN17182981 2275 COSMIC
COSN31540947 2451 COSMIC
COSN17076093 2683 COSMIC
COSN24588052 2817 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs756933288 3 dbSNP
rs374245665 5 dbSNP
rs1355348222 6 dbSNP
rs749643364 10 dbSNP
rs912701162 13 dbSNP
rs1335836346 14 dbSNP
rs769197673 17 dbSNP
rs1249256200 20 dbSNP
rs774913905 23 dbSNP
rs1195844500 26 dbSNP
rs368452575 33 dbSNP
rs772645278 34 dbSNP
rs1189913559 35 dbSNP
rs1305704332 36 dbSNP
rs370695512 45 dbSNP
rs773115958 48 dbSNP
rs1206474645 50 dbSNP
rs1427703381 51 dbSNP
rs760774388 53 dbSNP
rs965125460 54 dbSNP
rs148623709 56 dbSNP
rs532785338 57 dbSNP
rs918288852 59 dbSNP
rs930959089 60 dbSNP
rs1048332033 65 dbSNP
rs1417754697 67 dbSNP
rs1430844069 69 dbSNP
rs1171780442 70 dbSNP
rs1377537295 71 dbSNP
rs916505592 77 dbSNP
rs1054870809 81 dbSNP
rs1247984903 82 dbSNP
rs894914011 84 dbSNP
rs547686940 85 dbSNP
rs1319666228 86 dbSNP
rs1359551900 88 dbSNP
rs1046048766 92 dbSNP
rs198411 106 dbSNP
rs1221162329 109 dbSNP
rs906336780 113 dbSNP
rs1264400279 114 dbSNP
rs374327622 121 dbSNP
rs1207668623 126 dbSNP
rs1032712026 127 dbSNP
rs1053125467 129 dbSNP
rs893621508 136 dbSNP
rs891827798 137 dbSNP
rs1425165682 141 dbSNP
rs1479704022 143 dbSNP
rs1012009406 147 dbSNP
rs198412 158 dbSNP
rs1456940973 161 dbSNP
rs954449749 163 dbSNP
rs749078630 166 dbSNP
rs1007103863 169 dbSNP
rs1368364277 179 dbSNP
rs1472071195 180 dbSNP
rs1170170695 183 dbSNP
rs1289168327 190 dbSNP
rs772234374 192 dbSNP
rs569756540 196 dbSNP
rs537044523 197 dbSNP
rs1402977355 207 dbSNP
rs1284685684 214 dbSNP
rs954792240 220 dbSNP
rs1323677796 224 dbSNP
rs965526606 227 dbSNP
rs1281777432 241 dbSNP
rs1318347542 242 dbSNP
rs374582976 247 dbSNP
rs1408651442 270 dbSNP
rs1490008568 277 dbSNP
rs1202170386 278 dbSNP
rs962070648 280 dbSNP
rs973664197 282 dbSNP
rs1175555939 285 dbSNP
rs920876192 296 dbSNP
rs937499453 302 dbSNP
rs1337194076 303 dbSNP
rs1339690192 306 dbSNP
rs551835314 311 dbSNP
rs918320142 312 dbSNP
rs949146369 314 dbSNP
rs1408759946 318 dbSNP
rs570424929 319 dbSNP
rs1223945101 325 dbSNP
rs1289653997 327 dbSNP
rs747155715 330 dbSNP
rs1046166510 331 dbSNP
rs1293212308 348 dbSNP
rs570429301 361 dbSNP
rs935014469 362 dbSNP
rs1053695312 370 dbSNP
rs916216271 371 dbSNP
rs534577667 372 dbSNP
rs995999430 373 dbSNP
rs768792697 378 dbSNP
rs1409241186 380 dbSNP
rs927835832 382 dbSNP
rs757981103 386 dbSNP
rs777295802 390 dbSNP
rs1255847515 395 dbSNP
rs552896624 397 dbSNP
rs1283282330 401 dbSNP
rs891893368 402 dbSNP
rs1195868871 421 dbSNP
rs1248635607 426 dbSNP
rs574536678 429 dbSNP
rs947459965 435 dbSNP
rs1243265093 441 dbSNP
rs535238461 443 dbSNP
rs368201627 444 dbSNP
rs1015054482 446 dbSNP
rs1194547335 447 dbSNP
rs1043453410 450 dbSNP
rs557018718 451 dbSNP
rs962059175 455 dbSNP
rs1470402681 471 dbSNP
rs889788604 472 dbSNP
rs1241605503 478 dbSNP
rs575342148 485 dbSNP
rs1462771342 489 dbSNP
rs1185213309 491 dbSNP
rs995260811 492 dbSNP
rs1401167856 493 dbSNP
rs1166125700 495 dbSNP
rs1394076588 496 dbSNP
rs1007585427 502 dbSNP
rs1019863564 504 dbSNP
rs1335486255 507 dbSNP
rs1320205714 520 dbSNP
rs198413 523 dbSNP
rs1398813444 524 dbSNP
rs1454208014 527 dbSNP
rs959215618 529 dbSNP
rs114590315 530 dbSNP
rs1225673664 531 dbSNP
rs1272489730 533 dbSNP
rs1025790542 535 dbSNP
rs1340673411 536 dbSNP
rs1223684382 538 dbSNP
rs1261273903 539 dbSNP
rs198414 546 dbSNP
rs773494599 548 dbSNP
rs1207320605 554 dbSNP
rs17350396 559 dbSNP
rs1190735544 560 dbSNP
rs1243839471 560 dbSNP
rs144212143 561 dbSNP
rs923720696 562 dbSNP
rs1175119924 567 dbSNP
rs559705444 570 dbSNP
rs1217560628 584 dbSNP
rs934983203 588 dbSNP
rs1265629977 589 dbSNP
rs1383777752 590 dbSNP
rs1488273406 591 dbSNP
rs1320616446 592 dbSNP
rs982023953 600 dbSNP
rs1404827973 602 dbSNP
rs1281487739 613 dbSNP
rs1192169292 614 dbSNP
rs1224172948 624 dbSNP
rs1053880289 628 dbSNP
rs1203163215 635 dbSNP
rs1480813839 641 dbSNP
rs915121129 649 dbSNP
rs1198347718 657 dbSNP
rs1447550891 659 dbSNP
rs931898176 661 dbSNP
rs1266660751 677 dbSNP
rs927868370 683 dbSNP
rs530304884 686 dbSNP
rs1199507725 693 dbSNP
rs1362867962 694 dbSNP
rs542004077 698 dbSNP
rs187967934 699 dbSNP
rs530879393 704 dbSNP
rs987941287 705 dbSNP
rs147841484 706 dbSNP
rs1418966585 709 dbSNP
rs1301885703 717 dbSNP
rs947498259 723 dbSNP
rs1405690845 728 dbSNP
rs1306292018 735 dbSNP
rs796081826 737 dbSNP
rs1366818990 745 dbSNP
rs141462238 749 dbSNP
rs1261502938 759 dbSNP
rs1405098160 766 dbSNP
rs897924556 772 dbSNP
rs994812222 774 dbSNP
rs1490801075 782 dbSNP
rs889811123 784 dbSNP
rs528385443 785 dbSNP
rs1249152403 786 dbSNP
rs1416972247 789 dbSNP
rs958769081 801 dbSNP
rs1300150728 811 dbSNP
rs759057575 814 dbSNP
rs1041042706 817 dbSNP
rs115798392 818 dbSNP
rs766964968 820 dbSNP
rs146978720 833 dbSNP
rs1280464853 840 dbSNP
rs535618654 863 dbSNP
rs1425779244 864 dbSNP
rs752662093 866 dbSNP
rs1025823068 868 dbSNP
rs1393194916 870 dbSNP
rs1308053136 889 dbSNP
rs1382306119 892 dbSNP
rs1353467749 893 dbSNP
rs1312575552 894 dbSNP
rs888621357 906 dbSNP
rs1245374737 907 dbSNP
rs1294595740 909 dbSNP
rs1490534221 915 dbSNP
rs1250658194 916 dbSNP
rs1005747449 924 dbSNP
rs1209382045 933 dbSNP
rs549922040 936 dbSNP
rs1238475279 941 dbSNP
rs1460547100 945 dbSNP
rs1421061036 948 dbSNP
rs971524211 952 dbSNP
rs1387429418 961 dbSNP
rs1182826491 964 dbSNP
rs1170425389 965 dbSNP
rs1023371589 967 dbSNP
rs180846518 972 dbSNP
rs969485316 976 dbSNP
rs977571718 977 dbSNP
rs1438855835 978 dbSNP
rs1463653615 995 dbSNP
rs1298753318 997 dbSNP
rs1156765153 1002 dbSNP
rs981753990 1008 dbSNP
rs923690052 1014 dbSNP
rs1457948211 1016 dbSNP
rs1292477198 1023 dbSNP
rs371615502 1025 dbSNP
rs1384773618 1028 dbSNP
rs1294842160 1029 dbSNP
rs1034613362 1045 dbSNP
rs1392724372 1046 dbSNP
rs1331629921 1048 dbSNP
rs758218693 1048 dbSNP
rs766671352 1048 dbSNP
rs956623245 1051 dbSNP
rs55773965 1053 dbSNP
rs1317766513 1055 dbSNP
rs915093637 1057 dbSNP
rs1260267511 1058 dbSNP
rs1430754627 1063 dbSNP
rs1244736571 1065 dbSNP
rs140494777 1068 dbSNP
rs967893422 1071 dbSNP
rs944500907 1085 dbSNP
rs979277820 1092 dbSNP
rs1196531742 1094 dbSNP
rs557787711 1095 dbSNP
rs1407096295 1102 dbSNP
rs572835813 1103 dbSNP
rs1036201572 1105 dbSNP
rs1237871988 1113 dbSNP
rs541399545 1116 dbSNP
rs777744996 1117 dbSNP
rs1221145675 1122 dbSNP
rs1264694973 1123 dbSNP
rs1312344810 1126 dbSNP
rs1215537272 1128 dbSNP
rs1259282740 1129 dbSNP
rs942734404 1135 dbSNP
rs1176594716 1143 dbSNP
rs1041075224 1154 dbSNP
rs115517289 1155 dbSNP
rs1049186336 1156 dbSNP
rs930251601 1167 dbSNP
rs894450170 1180 dbSNP
rs1164025345 1181 dbSNP
rs1366144213 1183 dbSNP
rs1158128942 1184 dbSNP
rs1463075736 1188 dbSNP
rs1455135902 1189 dbSNP
rs74055029 1190 dbSNP
rs1402567055 1193 dbSNP
rs888642976 1193 dbSNP
rs1284581955 1194 dbSNP
rs1367893838 1195 dbSNP
rs367863413 1198 dbSNP
rs1005702748 1199 dbSNP
rs1445001576 1203 dbSNP
rs1217789080 1204 dbSNP
rs1045619569 1208 dbSNP
rs904947428 1209 dbSNP
rs542425005 1218 dbSNP
rs1224829945 1220 dbSNP
rs1395896271 1221 dbSNP
rs1311210014 1231 dbSNP
rs1309328714 1232 dbSNP
rs1410424977 1232 dbSNP
rs563512693 1234 dbSNP
rs1364901063 1236 dbSNP
rs1032262475 1245 dbSNP
rs1324992496 1246 dbSNP
rs1003205149 1251 dbSNP
rs1440806070 1261 dbSNP
rs957593258 1268 dbSNP
rs530916975 1294 dbSNP
rs545852828 1295 dbSNP
rs1375065243 1305 dbSNP
rs1034685343 1306 dbSNP
rs757072162 1307 dbSNP
rs198415 1313 dbSNP
rs747173875 1314 dbSNP
rs1244694059 1318 dbSNP
rs1291176475 1319 dbSNP
rs528484846 1327 dbSNP
rs755135065 1341 dbSNP
rs546609758 1342 dbSNP
rs985813969 1351 dbSNP
rs1179048250 1367 dbSNP
rs911775066 1371 dbSNP
rs369387109 1372 dbSNP
rs1254082840 1376 dbSNP
rs1164983411 1377 dbSNP
rs186252916 1377 dbSNP
rs972040129 1377 dbSNP
rs1167618525 1379 dbSNP
rs1466725733 1380 dbSNP
rs770257940 1384 dbSNP
rs964128381 1385 dbSNP
rs78231992 1386 dbSNP
rs922632019 1392 dbSNP
rs894572417 1396 dbSNP
rs550813590 1406 dbSNP
rs929950717 1407 dbSNP
rs1275147281 1408 dbSNP
rs1178154271 1413 dbSNP
rs1047788110 1414 dbSNP
rs41275502 1415 dbSNP
rs907430456 1416 dbSNP
rs1459857950 1418 dbSNP
rs1189355354 1424 dbSNP
rs999052934 1430 dbSNP
rs941573697 1431 dbSNP
rs1045237428 1433 dbSNP
rs905364884 1436 dbSNP
rs376845593 1439 dbSNP
rs1425095802 1442 dbSNP
rs372910998 1451 dbSNP
rs557875751 1453 dbSNP
rs1465658711 1457 dbSNP
rs1175324266 1458 dbSNP
rs1403437145 1461 dbSNP
rs893274484 1466 dbSNP
rs1011775057 1474 dbSNP
rs771268144 1490 dbSNP
rs774012408 1491 dbSNP
rs1022442187 1496 dbSNP
rs759149162 1504 dbSNP
rs1280615497 1511 dbSNP
rs1341263513 1527 dbSNP
rs577224494 1529 dbSNP
rs189512566 1530 dbSNP
rs1338549186 1533 dbSNP
rs553424540 1535 dbSNP
rs72640270 1537 dbSNP
rs1007851587 1540 dbSNP
rs919210554 1541 dbSNP
rs930442456 1542 dbSNP
rs1265214161 1545 dbSNP
rs1477893821 1554 dbSNP
rs775029839 1557 dbSNP
rs1197986819 1560 dbSNP
rs760220886 1570 dbSNP
rs551548499 1578 dbSNP
rs1254156098 1580 dbSNP
rs984657807 1581 dbSNP
rs1478781123 1584 dbSNP
rs542112042 1589 dbSNP
rs371736136 1591 dbSNP
rs915956632 1597 dbSNP
rs948813515 1598 dbSNP
rs965860270 1599 dbSNP
rs1486832101 1604 dbSNP
rs976865214 1610 dbSNP
rs1404414925 1615 dbSNP
rs557144141 1618 dbSNP
rs764005470 1627 dbSNP
rs753745052 1628 dbSNP
rs1349745598 1631 dbSNP
rs893407910 1638 dbSNP
rs150442270 1642 dbSNP
rs544699233 1645 dbSNP
rs1221126699 1650 dbSNP
rs564221413 1658 dbSNP
rs765079881 1663 dbSNP
rs751865473 1667 dbSNP
rs981421567 1674 dbSNP
rs573194559 1677 dbSNP
rs746013590 1682 dbSNP
rs1199191434 1686 dbSNP
rs1362849617 1689 dbSNP
rs1468987438 1691 dbSNP
rs939504024 1695 dbSNP
rs1381488277 1698 dbSNP
rs1424528247 1699 dbSNP
rs1301406374 1702 dbSNP
rs1174446504 1703 dbSNP
rs1018729215 1713 dbSNP
rs965690579 1718 dbSNP
rs781546673 1721 dbSNP
rs556282784 1722 dbSNP
rs1237707544 1728 dbSNP
rs1026625487 1731 dbSNP
rs540640156 1736 dbSNP
rs951997981 1739 dbSNP
rs1420790478 1746 dbSNP
rs1263588021 1757 dbSNP
rs1489209385 1762 dbSNP
rs1298137559 1770 dbSNP
rs376413895 1777 dbSNP
rs903515757 1781 dbSNP
rs915737384 1782 dbSNP
rs527371688 1783 dbSNP
rs1275651506 1786 dbSNP
rs1007510845 1798 dbSNP
rs1435655745 1803 dbSNP
rs969902170 1808 dbSNP
rs1239124511 1811 dbSNP
rs529188098 1813 dbSNP
rs1017520817 1818 dbSNP
rs181505282 1824 dbSNP
rs1162275926 1844 dbSNP
rs1218399397 1850 dbSNP
rs1370688957 1852 dbSNP
rs997371491 1857 dbSNP
rs1192415838 1859 dbSNP
rs41275504 1870 dbSNP
rs533156496 1873 dbSNP
rs914774902 1880 dbSNP
rs1332260710 1881 dbSNP
rs1377433254 1887 dbSNP
rs983267162 1894 dbSNP
rs551528523 1898 dbSNP
rs1016967292 1900 dbSNP
rs566545688 1902 dbSNP
rs963018305 1904 dbSNP
rs1244896814 1906 dbSNP
rs1250214028 1907 dbSNP
rs567044676 1908 dbSNP
rs926895807 1911 dbSNP
rs939576071 1912 dbSNP
rs992293596 1913 dbSNP
rs766214779 1915 dbSNP
rs778154496 1926 dbSNP
rs1258875549 1930 dbSNP
rs914034060 1939 dbSNP
rs533623698 1940 dbSNP
rs945185658 1941 dbSNP
rs138217633 1946 dbSNP
rs1440705249 1951 dbSNP
rs1158572788 1952 dbSNP
rs951834591 1957 dbSNP
rs1300801579 1959 dbSNP
rs1426606567 1961 dbSNP
rs1396491070 1962 dbSNP
rs903547930 1964 dbSNP
rs943013439 1965 dbSNP
rs1349406725 1966 dbSNP
rs1219919404 1968 dbSNP
rs1038698517 1971 dbSNP
rs1322310485 1974 dbSNP
rs1208497411 1975 dbSNP
rs1258095569 1977 dbSNP
rs901776573 1979 dbSNP
rs997402379 1980 dbSNP
rs1205110903 1981 dbSNP
rs1261642195 1982 dbSNP
rs1022860014 1984 dbSNP
rs1194396990 1985 dbSNP
rs1026190328 1989 dbSNP
rs1428877898 1990 dbSNP
rs886261820 1992 dbSNP
rs969851415 1994 dbSNP
rs186636256 1997 dbSNP
rs1017413544 2001 dbSNP
rs962803514 2004 dbSNP
rs1240671139 2005 dbSNP
rs928685881 2006 dbSNP
rs749752471 2015 dbSNP
rs1033605976 2016 dbSNP
rs535787101 2018 dbSNP
rs1344511212 2025 dbSNP
rs960946721 2031 dbSNP
rs190696412 2032 dbSNP
rs183231422 2034 dbSNP
rs1284513239 2036 dbSNP
rs1489525427 2037 dbSNP
rs967268500 2046 dbSNP
rs1217462605 2051 dbSNP
rs979229043 2052 dbSNP
rs1487526749 2056 dbSNP
rs1193189549 2064 dbSNP
rs925045464 2065 dbSNP
rs1450554241 2069 dbSNP
rs186440307 2075 dbSNP
rs1433624815 2084 dbSNP
rs1157753914 2086 dbSNP
rs1378419150 2088 dbSNP
rs771316117 2091 dbSNP
rs1298700319 2095 dbSNP
rs1364464846 2100 dbSNP
rs1038729223 2104 dbSNP
rs922928090 2106 dbSNP
rs1294997952 2108 dbSNP
rs1367792035 2121 dbSNP
rs933257467 2124 dbSNP
rs1047663109 2137 dbSNP
rs774737263 2138 dbSNP
rs1307470714 2140 dbSNP
rs1356502810 2151 dbSNP
rs1049993909 2154 dbSNP
rs1236855848 2163 dbSNP
rs886295403 2169 dbSNP
rs1223859820 2171 dbSNP
rs1164370387 2177 dbSNP
rs1480396243 2177 dbSNP
rs1177794800 2179 dbSNP
rs1236179051 2184 dbSNP
rs1441293543 2201 dbSNP
rs34086029 2202 dbSNP
rs1413072283 2206 dbSNP
rs746210292 2210 dbSNP
rs1037511618 2211 dbSNP
rs1041235122 2212 dbSNP
rs898581901 2213 dbSNP
rs1002204004 2221 dbSNP
rs1166219491 2222 dbSNP
rs11551468 2224 dbSNP
rs929060106 2228 dbSNP
rs149551449 2234 dbSNP
rs887431964 2235 dbSNP
rs960688000 2236 dbSNP
rs1447961435 2241 dbSNP
rs1315046137 2244 dbSNP
rs1377535212 2245 dbSNP
rs1013819993 2248 dbSNP
rs111486633 2249 dbSNP
rs1330377741 2252 dbSNP
rs540318980 2253 dbSNP
rs555898408 2255 dbSNP
rs1260222349 2258 dbSNP
rs1458977485 2261 dbSNP
rs956106939 2270 dbSNP
rs1236853213 2273 dbSNP
rs771770080 2274 dbSNP
rs1183129865 2275 dbSNP
rs775121599 2276 dbSNP
rs964461750 2279 dbSNP
rs1355034553 2282 dbSNP
rs1464626908 2290 dbSNP
rs1226177778 2294 dbSNP
rs562121410 2300 dbSNP
rs974480204 2306 dbSNP
rs1402013477 2315 dbSNP
rs988893602 2325 dbSNP
rs760109421 2326 dbSNP
rs922959211 2330 dbSNP
rs1197663435 2335 dbSNP
rs932951684 2339 dbSNP
rs1047402773 2345 dbSNP
rs907795729 2346 dbSNP
rs1444491177 2354 dbSNP
rs1188844406 2355 dbSNP
rs941923984 2361 dbSNP
rs1237466514 2365 dbSNP
rs1318806879 2368 dbSNP
rs41300098 2369 dbSNP
rs905691892 2370 dbSNP
rs41307751 2380 dbSNP
rs1212209336 2381 dbSNP
rs1055123371 2386 dbSNP
rs41310357 2390 dbSNP
rs191209545 2391 dbSNP
rs1425344741 2393 dbSNP
rs1397767453 2397 dbSNP
rs1013559565 2402 dbSNP
rs1172390378 2402 dbSNP
rs1400579657 2405 dbSNP
rs1020927494 2406 dbSNP
rs1335530262 2409 dbSNP
rs902775021 2415 dbSNP
rs1398249034 2420 dbSNP
rs1300066952 2423 dbSNP
rs72640273 2430 dbSNP
rs1032963683 2438 dbSNP
rs964860078 2445 dbSNP
rs941675544 2451 dbSNP
rs974511351 2452 dbSNP
rs1445135021 2455 dbSNP
rs1030102212 2456 dbSNP
rs1487888147 2459 dbSNP
rs905571159 2461 dbSNP
rs1002743608 2462 dbSNP
rs1036039777 2463 dbSNP
rs1279498942 2464 dbSNP
rs1455486309 2466 dbSNP
rs539012462 2469 dbSNP
rs1340624664 2470 dbSNP
rs560043326 2475 dbSNP
rs761691531 2477 dbSNP
rs1347558723 2479 dbSNP
rs907494750 2481 dbSNP
rs1173464455 2482 dbSNP
rs527389979 2483 dbSNP
rs564706338 2484 dbSNP
rs750297207 2485 dbSNP
rs1386268497 2488 dbSNP
rs1321898653 2492 dbSNP
rs927149486 2498 dbSNP
rs1332980640 2503 dbSNP
rs1438362075 2512 dbSNP
rs1303812021 2516 dbSNP
rs138999358 2517 dbSNP
rs758259286 2522 dbSNP
rs1237920186 2523 dbSNP
rs879042694 2525 dbSNP
rs1056870334 2527 dbSNP
rs1263924001 2538 dbSNP
rs1350847282 2541 dbSNP
rs1208659739 2547 dbSNP
rs965408100 2551 dbSNP
rs1452930065 2553 dbSNP
rs976981352 2558 dbSNP
rs113400811 2569 dbSNP
rs752904682 2571 dbSNP
rs1438202460 2572 dbSNP
rs1161031627 2576 dbSNP
rs1381465998 2578 dbSNP
rs1042786156 2579 dbSNP
rs1191775032 2585 dbSNP
rs902511317 2596 dbSNP
rs756167824 2598 dbSNP
rs1032575787 2616 dbSNP
rs1393175578 2626 dbSNP
rs1406129224 2627 dbSNP
rs1330894753 2628 dbSNP
rs930130447 2630 dbSNP
rs371148253 2634 dbSNP
rs765053309 2638 dbSNP
rs996356910 2648 dbSNP
rs1336218669 2649 dbSNP
rs984713013 2658 dbSNP
rs1478875404 2659 dbSNP
rs1307023748 2660 dbSNP
rs1357818663 2661 dbSNP
rs1213987734 2664 dbSNP
rs908921352 2665 dbSNP
rs142274304 2668 dbSNP
rs1030470167 2669 dbSNP
rs1239331232 2675 dbSNP
rs954447308 2675 dbSNP
rs1044164463 2680 dbSNP
rs926943435 2684 dbSNP
rs983217627 2688 dbSNP
rs1458455037 2689 dbSNP
rs1170320102 2690 dbSNP
rs1015037768 2693 dbSNP
rs1432735514 2700 dbSNP
rs1463882074 2702 dbSNP
rs1333063976 2704 dbSNP
rs1397167735 2705 dbSNP
rs777867807 2713 dbSNP
rs531303427 2714 dbSNP
rs1341810037 2722 dbSNP
rs373967970 2723 dbSNP
rs753830145 2725 dbSNP
rs14078 2731 dbSNP
rs41275506 2736 dbSNP
rs539719949 2742 dbSNP
rs992630403 2753 dbSNP
rs1200936139 2754 dbSNP
rs1332514162 2758 dbSNP
rs1252208420 2761 dbSNP
rs1483109771 2769 dbSNP
rs1199294481 2771 dbSNP
rs1288340440 2773 dbSNP
rs1475579754 2777 dbSNP
rs1192970670 2783 dbSNP
rs1233551795 2784 dbSNP
rs1478902971 2789 dbSNP
rs1043291819 2798 dbSNP
rs558331623 2801 dbSNP
rs1274591340 2802 dbSNP
rs1465351610 2803 dbSNP
rs1006975497 2809 dbSNP
rs904389436 2809 dbSNP
rs188895394 2827 dbSNP
rs1018391794 2831 dbSNP
rs1338004544 2846 dbSNP
rs965357924 2847 dbSNP
rs1295819751 2848 dbSNP
rs192618082 2857 dbSNP
rs555574714 2868 dbSNP
rs1312037877 2869 dbSNP
rs780309144 2881 dbSNP
rs998606039 2883 dbSNP
rs949541303 2887 dbSNP
rs1486258287 2895 dbSNP
rs1242876485 2896 dbSNP
rs1216026381 2900 dbSNP
rs1261180094 2904 dbSNP
rs1357538912 2906 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aggucaccaagaauugUCAAGUu 5'
                          |||||| 
Target 5' -------------ucaAGUUCAa 3'
 		1 - 10
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL35
Disease MIMAT0019814
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1020022. RNA binding protein: AGO2. Condition:EBV B95-8-infected ...

- Skalsky RL; Corcoran DL; Gottwein E; Frank et al., 2012, PLoS pathogens.

Article - Skalsky RL; Corcoran DL; Gottwein E; Frank et al.
- PLoS pathogens, 2012
Epstein-Barr virus (EBV) is a ubiquitous human herpesvirus linked to a number of B cell cancers and lymphoproliferative disorders. During latent infection, EBV expresses 25 viral pre-microRNAs (miRNAs) and induces the expression of specific host miRNAs, such as miR-155 and miR-21, which potentially play a role in viral oncogenesis. To date, only a limited number of EBV miRNA targets have been identified; thus, the role of EBV miRNAs in viral pathogenesis and/or lymphomagenesis is not well defined. Here, we used photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) combined with deep sequencing and computational analysis to comprehensively examine the viral and cellular miRNA targetome in EBV strain B95-8-infected lymphoblastoid cell lines (LCLs). We identified 7,827 miRNA-interaction sites in 3,492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs. 24 PAR-CLIP-identified miRNA:3'UTR interactions were confirmed by reporter assays. Our results reveal that EBV miRNAs predominantly target cellular transcripts during latent infection, thereby manipulating the host environment. Furthermore, targets of EBV miRNAs are involved in multiple cellular processes that are directly relevant to viral infection, including innate immunity, cell survival, and cell proliferation. Finally, we present evidence that myc-regulated host miRNAs from the miR-17/92 cluster can regulate latent viral gene expression. This comprehensive survey of the miRNA targetome in EBV-infected B cells represents a key step towards defining the functions of EBV-encoded miRNAs, and potentially, identifying novel therapeutic targets for EBV-associated malignancies.
LinkOut: [PMID: 22291592]
CLIP-seq Support 1 for dataset GSM1020022
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL35 / EBV B95-8-infected, 4-thiouridine, RNase T1
Location of target site ENST00000312413.6 | 3UTR | ucaaguucaagaaaucc
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22291592 / GSE41437
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000312413.6 | 3UTR | ucaaguucaagaaauccag
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000312413.6 | 3UTR | ucaaguucaagaaauccag
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
154 hsa-miR-203b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT063500 SKI SKI proto-oncogene 2 4
MIRT149737 LDLR low density lipoprotein receptor 2 6
MIRT206557 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT248820 SESN2 sestrin 2 2 2
MIRT261314 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT443290 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT443893 NUDT3 nudix hydrolase 3 2 4
MIRT444057 SERPINA4 serpin family A member 4 2 2
MIRT444345 KIAA1211 KIAA1211 2 2
MIRT444538 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT444594 TGFA transforming growth factor alpha 2 2
MIRT445601 SEC14L3 SEC14 like lipid binding 3 2 2
MIRT446025 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT446309 TBC1D8B TBC1 domain family member 8B 2 2
MIRT446492 TMEM215 transmembrane protein 215 2 4
MIRT446728 SLC36A4 solute carrier family 36 member 4 2 2
MIRT447468 CISD2 CDGSH iron sulfur domain 2 2 2
MIRT447504 MRPS5 mitochondrial ribosomal protein S5 2 2
MIRT447597 MRPL3 mitochondrial ribosomal protein L3 2 2
MIRT447636 AGPS alkylglycerone phosphate synthase 2 2
MIRT447846 ZRANB2 zinc finger RANBP2-type containing 2 2 2
MIRT448098 TCN2 transcobalamin 2 2 2
MIRT448111 SEMA4G semaphorin 4G 2 2
MIRT448903 CLCN6 chloride voltage-gated channel 6 2 4
MIRT449396 TOX4 TOX high mobility group box family member 4 2 2
MIRT449484 CACNA2D4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 2 2
MIRT450705 RNF152 ring finger protein 152 2 2
MIRT450781 PAPOLG poly(A) polymerase gamma 2 2
MIRT452856 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT453048 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT459389 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT461156 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461613 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT463711 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 2 8
MIRT464107 VPS35 VPS35, retromer complex component 2 2
MIRT466438 TFAM transcription factor A, mitochondrial 2 2
MIRT467735 SLC36A1 solute carrier family 36 member 1 2 2
MIRT469512 RBFOX2 RNA binding protein, fox-1 homolog 2 2 6
MIRT470026 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT473411 MDM4 MDM4, p53 regulator 2 2
MIRT480545 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT488444 ACBD3 acyl-CoA binding domain containing 3 2 2
MIRT489498 CRLF3 cytokine receptor like factor 3 2 4
MIRT496149 RPS15A ribosomal protein S15a 2 2
MIRT497013 PRDM2 PR/SET domain 2 2 2
MIRT497087 PHF12 PHD finger protein 12 2 2
MIRT508695 MTRNR2L4 MT-RNR2-like 4 2 4
MIRT517468 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT525329 CNGB1 cyclic nucleotide gated channel beta 1 2 2
MIRT527842 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT529111 AQPEP laeverin 1 1
MIRT530163 C11orf44 chromosome 11 open reading frame 44 2 4
MIRT532249 TBPL2 TATA-box binding protein like 2 2 2
MIRT532828 ZNF704 zinc finger protein 704 2 2
MIRT533140 WNT10A Wnt family member 10A 2 2
MIRT536481 KIAA1468 KIAA1468 2 2
MIRT536802 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT537301 FRS2 fibroblast growth factor receptor substrate 2 2 2
MIRT542650 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 2
MIRT545691 NUTF2 nuclear transport factor 2 2 2
MIRT546960 PRR14L proline rich 14 like 2 2
MIRT560566 ZNF460 zinc finger protein 460 2 2
MIRT561792 PAWR pro-apoptotic WT1 regulator 2 2
MIRT562372 ERI2 ERI1 exoribonuclease family member 2 2 2
MIRT569292 SURF6 surfeit 6 2 2
MIRT574090 VASN vasorin 2 2
MIRT619787 HLCS holocarboxylase synthetase 2 2
MIRT620104 HARBI1 harbinger transposase derived 1 2 2
MIRT626003 ZNF517 zinc finger protein 517 2 2
MIRT626375 BBS1 Bardet-Biedl syndrome 1 2 2
MIRT626615 SLC30A6 solute carrier family 30 member 6 2 2
MIRT628381 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT629299 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT630439 IDE insulin degrading enzyme 2 2
MIRT631848 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT633171 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633472 ZNF724P zinc finger protein 724 2 2
MIRT634389 PLSCR1 phospholipid scramblase 1 2 2
MIRT635536 TRIM72 tripartite motif containing 72 2 2
MIRT635818 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT636165 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT636792 CYB5D1 cytochrome b5 domain containing 1 2 2
MIRT637946 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT640317 STAT1 signal transducer and activator of transcription 1 2 2
MIRT645131 HES2 hes family bHLH transcription factor 2 2 2
MIRT645658 ADK adenosine kinase 2 2
MIRT646143 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT646999 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT648183 C2orf68 chromosome 2 open reading frame 68 2 2
MIRT650085 TERF2 telomeric repeat binding factor 2 2 2
MIRT650326 RTN2 reticulon 2 2 2
MIRT651562 WHSC1L1 nuclear receptor binding SET domain protein 3 2 2
MIRT659367 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT659830 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT662103 LACTB lactamase beta 2 4
MIRT664837 HUS1 HUS1 checkpoint clamp component 2 2
MIRT669750 ZNF101 zinc finger protein 101 2 4
MIRT669791 GAN gigaxonin 2 2
MIRT670044 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT670293 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670382 EMP2 epithelial membrane protein 2 2 2
MIRT670950 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 4
MIRT672854 C22orf29 retrotransposon Gag like 10 2 2
MIRT672885 FXN frataxin 2 2
MIRT673994 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT674155 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674495 TIRAP TIR domain containing adaptor protein 2 2
MIRT675461 NUBPL nucleotide binding protein like 2 2
MIRT675669 TMOD2 tropomodulin 2 2 2
MIRT675994 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676069 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676378 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676759 SNX2 sorting nexin 2 2 2
MIRT676893 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT676973 ZNF708 zinc finger protein 708 2 2
MIRT677229 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677363 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT677456 PDLIM3 PDZ and LIM domain 3 2 2
MIRT678073 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678091 ATCAY ATCAY, caytaxin 2 2
MIRT678316 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678411 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678519 ZNF347 zinc finger protein 347 2 2
MIRT678695 TRIP11 thyroid hormone receptor interactor 11 2 2
MIRT678821 PDE6A phosphodiesterase 6A 2 2
MIRT679984 RUNDC1 RUN domain containing 1 2 2
MIRT680608 KIAA0391 KIAA0391 2 2
MIRT680724 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT681238 ZNF383 zinc finger protein 383 2 2
MIRT681932 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682003 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT682500 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 2
MIRT685460 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT688193 FNIP1 folliculin interacting protein 1 2 2
MIRT689666 RBM23 RNA binding motif protein 23 2 2
MIRT691058 CRCP CGRP receptor component 2 2
MIRT691442 CXorf36 chromosome X open reading frame 36 2 2
MIRT695998 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696395 CORO7 coronin 7 2 2
MIRT702334 KLHL7 kelch like family member 7 2 2
MIRT702555 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT703362 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703551 FKBP14 FK506 binding protein 14 2 2
MIRT705029 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT706335 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT708907 TM4SF19 transmembrane 4 L six family member 19 2 2
MIRT711625 CORO1C coronin 1C 2 2
MIRT714444 TOPAZ1 testis and ovary specific PAZ domain containing 1 2 2
MIRT716324 POU5F1 POU class 5 homeobox 1 2 2
MIRT718568 SLC25A22 solute carrier family 25 member 22 2 2
MIRT720299 DDHD1 DDHD domain containing 1 2 2
MIRT721449 AGPAT6 glycerol-3-phosphate acyltransferase 4 2 2
MIRT723529 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 2
MIRT724492 BFAR bifunctional apoptosis regulator 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-203b Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 down-regulated
miR-203b 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Microarray embryos 22921993 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-203b-3p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-203b-3p Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-203b-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-203b-3p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-203b-3p Tamoxifen 2733525 NSC180973 approved sensitive cell line (LCC2)
hsa-miR-203b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CP20)
hsa-miR-203b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-203b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-203b-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-203b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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