miRTarBase - #MIRT450708


—
pre-miRNA Information
pre-miRNA hsa-mir-4680   
Genomic Coordinates chr10: 110898090 - 110898155
Description Homo sapiens miR-4680 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4680-5p
Sequence 5| AGAACUCUUGCAGUCUUAGAUGU |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1274530692 2 dbSNP
rs780271274 5 dbSNP
rs1461423681 7 dbSNP
rs749729920 8 dbSNP
rs1252920446 10 dbSNP
rs201739274 11 dbSNP
rs774971106 19 dbSNP
rs748132091 22 dbSNP
rs773643180 22 dbSNP
rs1235425484 23 dbSNP
Putative Targets

Gene Information
Gene Symbol RNF152   
Synonyms -
Description ring finger protein 152
Transcript NM_173557   
Expression
Putative miRNA Targets on RNF152
3'UTR of RNF152
(miRNA target sites are highlighted)		 
>RNF152|NM_173557|3'UTR
   1 AGAGGGCTGCAGGGAAGTCTCTTGTGGGTGCCAACTTAGGGGTTGAGCAGGTTGATGATGAGATCCCAGTGAGAAGATGG
  81 GGGGCAACACTGACCATTTGGTGCTGAGCGCTGGCCTCTGGGTTGCCTCTTGATTACCCCAAGACAGACACAAAGGGCAG
 161 AAGGTGCGGTCTCAACAAGATACCAGGTGAATTGTTCTGAGTGTTGATGGCAACAGCTTGGAAGATGATTGCATGCATCC
 241 TCATAATCATGTATTCAATGGACTGTAATTTATGATTTTTCAAAATCATGTTACAAGATAGACATATTCTACTTAGACGT
 321 TAAACTGTACAAGTGCGTACAATGTGACCTTCTCTAAATGCGGTAGATTCAAACAAAGATGCTCTGTAGACAAGTAGAAT
 401 TAAACCTGCGAATCCGTGTAAAAATTCAGTGAAGACATGCACTGCTGGCTTCTTTATTTTTTTTTTCTTTTTATTGAAAC
 481 CCAGTCTTCATTTAGTTGCTAAGGCTTTTAATACATTTTGAATGGCACCAAAACAAAATAAGTCAAAATGGACAGTCATT
 561 TTATTTGGAGGAAATATTTGAACAAGTGTCTCCAATGTGTTGTGTTTTGTCATGAACCTTCATTTTCTTCACTTGTAATT
 641 AGAGCTTGCTACGTGTTTATGGAACTGAAAGCTCAACAGGGGAGCAATAAACCGAGAAATCATGAGAAATGTCTAATCCC
 721 ATGGGAAAACCTGTATGCCGATTTTCCTCAAGCCATCTCACAAAATAAGAATTTCAAATGT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugUAGAUUCUGACGUUCUCAAGa 5'
            |||| | |   :|||| ||: 
Target 5' ccATCTCACAAAATAAGAATTTc 3'
 753 - 775 113.00 -6.04
2 
miRNA  3' uguAGAUUCUGACGU--UCUCAAGa 5'
             ||||| | |||:  ||| ||| 
Target 5' ttcTCTAA-A-TGCGGTAGA-TTCa 3'
 350 - 371 108.00 -8.10
3 
miRNA  3' uguAGAU-UCUGACGUUCUCAAga 5'
             |||: ||||    ||| ||  
Target 5' tgcTCTGTAGACAAGTAGAATTaa 3'
 380 - 403 104.00 -5.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31481814 5 COSMIC
COSN30449629 14 COSMIC
COSN30469882 23 COSMIC
COSN30485806 27 COSMIC
COSN31496130 27 COSMIC
COSN30478294 35 COSMIC
COSN30170335 51 COSMIC
COSN30489092 54 COSMIC
COSN31531137 63 COSMIC
COSN30463250 66 COSMIC
COSN30495921 66 COSMIC
COSN26992416 79 COSMIC
COSN30182334 85 COSMIC
COSN27791193 91 COSMIC
COSN19663843 109 COSMIC
COSN30500210 125 COSMIC
COSN30512071 131 COSMIC
COSN6130073 171 COSMIC
COSN1208082 175 COSMIC
COSN17075977 441 COSMIC
COSN25082932 450 COSMIC
COSN31488272 514 COSMIC
COSN32064089 612 COSMIC
COSN26562226 677 COSMIC
COSN26604252 747 COSMIC
COSN30169800 749 COSMIC
COSN28769140 802 COSMIC
COSN31779220 805 COSMIC
COSN26409600 815 COSMIC
COSN29282810 1071 COSMIC
COSN5430550 1327 COSMIC
COSN8253254 1480 COSMIC
COSN27375841 2048 COSMIC
COSN9340132 2073 COSMIC
COSN21982079 2317 COSMIC
COSN22349470 2391 COSMIC
COSN25029098 2423 COSMIC
COSN4906709 2555 COSMIC
COSN27601977 2564 COSMIC
COSN27294740 2572 COSMIC
COSN27549449 2572 COSMIC
COSN9841821 2626 COSMIC
COSN18723731 2926 COSMIC
COSN25464850 3469 COSMIC
COSN23269277 3558 COSMIC
COSN23338580 3621 COSMIC
COSN30327640 3767 COSMIC
COSN31779223 3817 COSMIC
COSN19440346 3888 COSMIC
COSN29786602 4085 COSMIC
COSN28198106 4130 COSMIC
COSN16637493 4179 COSMIC
COSN1751096 4724 COSMIC
COSN28906417 4791 COSMIC
COSN28201263 4804 COSMIC
COSN6416675 4805 COSMIC
COSN7365203 5224 COSMIC
COSN29544834 5433 COSMIC
COSN27485824 5557 COSMIC
COSN29089026 5557 COSMIC
COSN21965642 5877 COSMIC
COSN16745628 5892 COSMIC
COSN28964030 5974 COSMIC
COSN18757913 5996 COSMIC
COSN4774745 6139 COSMIC
COSN22767812 6259 COSMIC
COSN9841820 6315 COSMIC
COSN17839564 6510 COSMIC
COSN7365202 6772 COSMIC
COSN1751095 6786 COSMIC
COSN5430549 6818 COSMIC
COSN21469756 7025 COSMIC
COSN29217116 7074 COSMIC
COSN25575232 7300 COSMIC
COSN25607168 7301 COSMIC
COSN23128062 7440 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs375298877 2 dbSNP
rs1305114813 6 dbSNP
rs115452639 7 dbSNP
rs1369532397 13 dbSNP
rs758148365 16 dbSNP
rs752453917 20 dbSNP
rs1385451631 22 dbSNP
rs1341089078 27 dbSNP
rs1288045176 28 dbSNP
rs757379623 30 dbSNP
rs764986744 30 dbSNP
rs1237061682 31 dbSNP
rs751649421 32 dbSNP
rs759501990 34 dbSNP
rs1174423483 35 dbSNP
rs1453886157 40 dbSNP
rs868630248 43 dbSNP
rs1375987300 45 dbSNP
rs1265247814 46 dbSNP
rs776497043 48 dbSNP
rs1432380117 53 dbSNP
rs1170933154 54 dbSNP
rs1374979312 62 dbSNP
rs1464281915 67 dbSNP
rs1056816385 70 dbSNP
rs929022299 72 dbSNP
rs1443679856 79 dbSNP
rs1184869348 82 dbSNP
rs1324457034 82 dbSNP
rs1367605917 83 dbSNP
rs1298254332 85 dbSNP
rs1383100338 85 dbSNP
rs1483659525 85 dbSNP
rs918927091 87 dbSNP
rs1256801427 101 dbSNP
rs1251788441 107 dbSNP
rs550592312 109 dbSNP
rs1037417907 110 dbSNP
rs1488143723 116 dbSNP
rs1453357554 120 dbSNP
rs941795923 123 dbSNP
rs1263623728 125 dbSNP
rs1290703714 125 dbSNP
rs1227894591 141 dbSNP
rs530882930 157 dbSNP
rs1193233166 161 dbSNP
rs1418922626 164 dbSNP
rs1354601638 166 dbSNP
rs910694022 166 dbSNP
rs564690610 167 dbSNP
rs138225766 168 dbSNP
rs1349767433 169 dbSNP
rs1290930481 173 dbSNP
rs1360327569 176 dbSNP
rs1399840348 177 dbSNP
rs1286341516 178 dbSNP
rs544812655 184 dbSNP
rs923563163 186 dbSNP
rs1277171936 214 dbSNP
rs1355740965 217 dbSNP
rs1234569857 228 dbSNP
rs1322310870 230 dbSNP
rs1321005281 232 dbSNP
rs531628746 233 dbSNP
rs562593565 236 dbSNP
rs1262214089 239 dbSNP
rs1487178667 242 dbSNP
rs956697441 249 dbSNP
rs1258456297 254 dbSNP
rs1032759253 263 dbSNP
rs1000933840 265 dbSNP
rs969473594 272 dbSNP
rs867180399 274 dbSNP
rs1161891729 276 dbSNP
rs1022786704 285 dbSNP
rs1419447619 287 dbSNP
rs1012795060 289 dbSNP
rs1473145031 290 dbSNP
rs376679052 293 dbSNP
rs1449815689 297 dbSNP
rs1281856147 303 dbSNP
rs187813232 309 dbSNP
rs1057039014 314 dbSNP
rs1309053854 318 dbSNP
rs993826722 319 dbSNP
rs1378721416 322 dbSNP
rs1247291738 325 dbSNP
rs897467255 327 dbSNP
rs1450063984 329 dbSNP
rs767050829 333 dbSNP
rs1237174947 336 dbSNP
rs560235677 337 dbSNP
rs910324028 340 dbSNP
rs1378978123 352 dbSNP
rs1266026261 353 dbSNP
rs1439643880 354 dbSNP
rs1174613008 356 dbSNP
rs182685095 361 dbSNP
rs146977797 362 dbSNP
rs1415765112 378 dbSNP
rs1368301902 381 dbSNP
rs1273719893 383 dbSNP
rs554986807 404 dbSNP
rs142837580 409 dbSNP
rs923447354 410 dbSNP
rs1332852119 415 dbSNP
rs988369909 416 dbSNP
rs1445996525 432 dbSNP
rs866340517 437 dbSNP
rs1303792878 438 dbSNP
rs1366877806 442 dbSNP
rs1320759218 444 dbSNP
rs1278142122 457 dbSNP
rs1308351693 460 dbSNP
rs1206653263 462 dbSNP
rs111603571 467 dbSNP
rs1142939 467 dbSNP
rs1236467925 467 dbSNP
rs575905941 494 dbSNP
rs774223869 495 dbSNP
rs1477243486 499 dbSNP
rs1388285126 501 dbSNP
rs925278797 503 dbSNP
rs1410208460 504 dbSNP
rs979870008 510 dbSNP
rs969458759 512 dbSNP
rs748925333 520 dbSNP
rs1326488361 523 dbSNP
rs1023759815 525 dbSNP
rs1013686362 529 dbSNP
rs959823949 540 dbSNP
rs1220700466 541 dbSNP
rs1256172404 546 dbSNP
rs56116436 548 dbSNP
rs1317361925 552 dbSNP
rs1214470843 563 dbSNP
rs1426550213 568 dbSNP
rs559162304 577 dbSNP
rs1477060403 594 dbSNP
rs1250006742 610 dbSNP
rs1035953213 611 dbSNP
rs1464617769 612 dbSNP
rs1195420163 613 dbSNP
rs539260784 617 dbSNP
rs1212043589 637 dbSNP
rs573508445 648 dbSNP
rs545700834 652 dbSNP
rs1015910885 653 dbSNP
rs1403563636 655 dbSNP
rs553089390 665 dbSNP
rs1322568336 667 dbSNP
rs762587634 671 dbSNP
rs773071334 677 dbSNP
rs1006337860 682 dbSNP
rs191372310 693 dbSNP
rs576594383 694 dbSNP
rs1362664813 704 dbSNP
rs974438521 712 dbSNP
rs901995525 715 dbSNP
rs961360915 718 dbSNP
rs1489471218 719 dbSNP
rs1214955244 721 dbSNP
rs1016016549 739 dbSNP
rs762167768 740 dbSNP
rs776831287 741 dbSNP
rs1471736630 747 dbSNP
rs1162573660 750 dbSNP
rs138383704 755 dbSNP
rs1408715759 757 dbSNP
rs979449550 762 dbSNP
rs187604516 775 dbSNP
rs1433418205 776 dbSNP
rs183277288 778 dbSNP
rs1169381044 789 dbSNP
rs1415661886 790 dbSNP
rs992222431 796 dbSNP
rs190314188 799 dbSNP
rs9973181 802 dbSNP
rs1002359893 803 dbSNP
rs904055931 806 dbSNP
rs1356522555 809 dbSNP
rs1183346773 813 dbSNP
rs377731042 817 dbSNP
rs1483430999 825 dbSNP
rs1010242538 844 dbSNP
rs1200689752 848 dbSNP
rs528249719 863 dbSNP
rs1440192683 866 dbSNP
rs1053217491 878 dbSNP
rs961982373 883 dbSNP
rs1483995491 884 dbSNP
rs943730870 885 dbSNP
rs559154407 886 dbSNP
rs1016627005 888 dbSNP
rs1227099790 889 dbSNP
rs546767245 896 dbSNP
rs1049503380 907 dbSNP
rs1314387226 908 dbSNP
rs1228558395 913 dbSNP
rs1174527041 920 dbSNP
rs1006099749 921 dbSNP
rs1395499416 928 dbSNP
rs60918332 931 dbSNP
rs60358145 933 dbSNP
rs888741920 936 dbSNP
rs1445218355 938 dbSNP
rs561078640 939 dbSNP
rs1373009364 941 dbSNP
rs780644888 942 dbSNP
rs866546394 948 dbSNP
rs932486252 954 dbSNP
rs1429234659 955 dbSNP
rs73456334 957 dbSNP
rs973981516 959 dbSNP
rs575822382 968 dbSNP
rs908515013 970 dbSNP
rs1424625955 971 dbSNP
rs1176719338 972 dbSNP
rs140510310 973 dbSNP
rs1433555969 980 dbSNP
rs1200791374 988 dbSNP
rs1376080855 992 dbSNP
rs960726168 1004 dbSNP
rs1483985764 1005 dbSNP
rs1252506095 1008 dbSNP
rs1464186581 1031 dbSNP
rs1331254833 1033 dbSNP
rs545754347 1044 dbSNP
rs772649569 1047 dbSNP
rs1372413935 1053 dbSNP
rs980891337 1059 dbSNP
rs968174690 1064 dbSNP
rs1052597499 1070 dbSNP
rs1328959370 1076 dbSNP
rs1232086447 1079 dbSNP
rs1022899870 1093 dbSNP
rs1258083080 1096 dbSNP
rs1319376160 1098 dbSNP
rs1009799342 1100 dbSNP
rs573466526 1101 dbSNP
rs1019224084 1102 dbSNP
rs1192666607 1103 dbSNP
rs1265003228 1110 dbSNP
rs553650281 1118 dbSNP
rs1432759458 1119 dbSNP
rs1007843030 1124 dbSNP
rs778284148 1125 dbSNP
rs535921946 1134 dbSNP
rs1426129605 1142 dbSNP
rs904029498 1145 dbSNP
rs573688410 1150 dbSNP
rs1320815778 1154 dbSNP
rs1044329636 1156 dbSNP
rs8092621 1169 dbSNP
rs540314556 1176 dbSNP
rs537071999 1181 dbSNP
rs1292083136 1182 dbSNP
rs1390486124 1183 dbSNP
rs1352834669 1184 dbSNP
rs932407774 1194 dbSNP
rs1342037042 1195 dbSNP
rs1277049724 1197 dbSNP
rs898297764 1210 dbSNP
rs1322181447 1219 dbSNP
rs1223688750 1221 dbSNP
rs186048444 1222 dbSNP
rs1488032407 1228 dbSNP
rs1217119900 1229 dbSNP
rs1265583618 1233 dbSNP
rs1487444235 1237 dbSNP
rs939891800 1237 dbSNP
rs551244078 1238 dbSNP
rs534638698 1242 dbSNP
rs1163281125 1252 dbSNP
rs1368466552 1253 dbSNP
rs992109322 1255 dbSNP
rs753445886 1266 dbSNP
rs528472964 1272 dbSNP
rs1397749584 1273 dbSNP
rs1296975293 1291 dbSNP
rs1379244076 1297 dbSNP
rs962151186 1306 dbSNP
rs1310447584 1313 dbSNP
rs1321099376 1314 dbSNP
rs574877784 1317 dbSNP
rs1162495153 1323 dbSNP
rs1287936871 1323 dbSNP
rs554947796 1328 dbSNP
rs1216183770 1333 dbSNP
rs1238328763 1335 dbSNP
rs1016099751 1336 dbSNP
rs926613134 1338 dbSNP
rs980824093 1339 dbSNP
rs1440876986 1341 dbSNP
rs984648253 1343 dbSNP
rs968556300 1347 dbSNP
rs1378863850 1349 dbSNP
rs1473429647 1352 dbSNP
rs143255842 1361 dbSNP
rs755688355 1362 dbSNP
rs1449553900 1375 dbSNP
rs956929319 1382 dbSNP
rs1300592415 1388 dbSNP
rs1381899687 1393 dbSNP
rs1417244784 1413 dbSNP
rs1447431680 1420 dbSNP
rs1019154813 1423 dbSNP
rs1311109933 1431 dbSNP
rs1351218505 1437 dbSNP
rs530105731 1438 dbSNP
rs1279566392 1444 dbSNP
rs1314219520 1445 dbSNP
rs890754754 1448 dbSNP
rs373230699 1454 dbSNP
rs1458570820 1456 dbSNP
rs1181030425 1457 dbSNP
rs1031134180 1459 dbSNP
rs1439469488 1460 dbSNP
rs1192196103 1461 dbSNP
rs149213369 1462 dbSNP
rs1415825212 1466 dbSNP
rs1173292232 1470 dbSNP
rs999286724 1483 dbSNP
rs1465733112 1485 dbSNP
rs1027956810 1493 dbSNP
rs1441186929 1495 dbSNP
rs1275230614 1496 dbSNP
rs1043932145 1500 dbSNP
rs1269174913 1512 dbSNP
rs1217716022 1527 dbSNP
rs1012493791 1529 dbSNP
rs79890317 1536 dbSNP
rs1256703713 1537 dbSNP
rs1457722922 1540 dbSNP
rs1334577484 1545 dbSNP
rs1222685712 1554 dbSNP
rs1248851049 1556 dbSNP
rs898218992 1564 dbSNP
rs1056478284 1566 dbSNP
rs1189076577 1574 dbSNP
rs1303481184 1576 dbSNP
rs1477857848 1577 dbSNP
rs1038149737 1582 dbSNP
rs1367039714 1585 dbSNP
rs183232006 1596 dbSNP
rs1037482647 1597 dbSNP
rs559263654 1599 dbSNP
rs545713641 1604 dbSNP
rs941471804 1611 dbSNP
rs886984628 1617 dbSNP
rs1434084378 1624 dbSNP
rs1282880853 1626 dbSNP
rs146649781 1627 dbSNP
rs1158236966 1632 dbSNP
rs75659514 1633 dbSNP
rs953277706 1636 dbSNP
rs1292700281 1638 dbSNP
rs1450202679 1647 dbSNP
rs926587600 1655 dbSNP
rs1221377331 1660 dbSNP
rs921891923 1661 dbSNP
rs1488418987 1664 dbSNP
rs1379351430 1668 dbSNP
rs766169047 1672 dbSNP
rs144392780 1675 dbSNP
rs763003011 1682 dbSNP
rs1163743956 1686 dbSNP
rs999654604 1697 dbSNP
rs1403380648 1702 dbSNP
rs1302323513 1707 dbSNP
rs988284956 1707 dbSNP
rs967854043 1708 dbSNP
rs1022455771 1710 dbSNP
rs1190042057 1726 dbSNP
rs1465068506 1727 dbSNP
rs573626378 1730 dbSNP
rs556996101 1739 dbSNP
rs1012462704 1740 dbSNP
rs1325907359 1746 dbSNP
rs1056694803 1753 dbSNP
rs1354930456 1757 dbSNP
rs957054958 1763 dbSNP
rs912071804 1769 dbSNP
rs543188124 1772 dbSNP
rs987652678 1786 dbSNP
rs953646937 1788 dbSNP
rs1353919010 1789 dbSNP
rs1349130842 1794 dbSNP
rs1218319101 1802 dbSNP
rs1029221701 1814 dbSNP
rs1037046684 1819 dbSNP
rs79089280 1822 dbSNP
rs1239073179 1824 dbSNP
rs1471772612 1827 dbSNP
rs1258246724 1842 dbSNP
rs996902670 1843 dbSNP
rs1234635658 1844 dbSNP
rs58003808 1845 dbSNP
rs1017091842 1849 dbSNP
rs191317433 1851 dbSNP
rs765130582 1856 dbSNP
rs909993128 1858 dbSNP
rs1048878286 1860 dbSNP
rs1310698733 1865 dbSNP
rs1379542151 1869 dbSNP
rs1437544784 1871 dbSNP
rs1366271021 1877 dbSNP
rs1258571884 1898 dbSNP
rs1003967981 1900 dbSNP
rs1319620558 1901 dbSNP
rs1380355026 1908 dbSNP
rs1200464200 1911 dbSNP
rs886907987 1914 dbSNP
rs1182887977 1916 dbSNP
rs761724164 1918 dbSNP
rs534556704 1923 dbSNP
rs975949233 1931 dbSNP
rs966002834 1935 dbSNP
rs185989058 1937 dbSNP
rs1003401143 1939 dbSNP
rs905098600 1942 dbSNP
rs977810365 1943 dbSNP
rs968202686 1944 dbSNP
rs1045039474 1950 dbSNP
rs1469395133 1952 dbSNP
rs534958658 1953 dbSNP
rs915250361 1965 dbSNP
rs1052916530 1979 dbSNP
rs180751777 1987 dbSNP
rs1392649449 1989 dbSNP
rs574706203 2003 dbSNP
rs4520933 2004 dbSNP
rs953573517 2008 dbSNP
rs922178504 2009 dbSNP
rs1334764373 2022 dbSNP
rs973719669 2029 dbSNP
rs1276299100 2035 dbSNP
rs959486513 2036 dbSNP
rs962652564 2039 dbSNP
rs1192879558 2045 dbSNP
rs1016607628 2049 dbSNP
rs1258615612 2051 dbSNP
rs1459042064 2055 dbSNP
rs188337443 2057 dbSNP
rs1249589199 2064 dbSNP
rs533911889 2064 dbSNP
rs1258720387 2066 dbSNP
rs897432923 2086 dbSNP
rs951092820 2090 dbSNP
rs1403004098 2092 dbSNP
rs1464549806 2096 dbSNP
rs139655910 2097 dbSNP
rs1391881564 2099 dbSNP
rs1436138822 2101 dbSNP
rs1388927196 2115 dbSNP
rs772450692 2121 dbSNP
rs1278267414 2127 dbSNP
rs766376491 2138 dbSNP
rs905067664 2144 dbSNP
rs565632251 2147 dbSNP
rs1222311920 2152 dbSNP
rs1010830307 2156 dbSNP
rs932756671 2163 dbSNP
rs117081940 2164 dbSNP
rs1040234444 2168 dbSNP
rs1250733248 2168 dbSNP
rs1211480067 2176 dbSNP
rs1266972405 2177 dbSNP
rs1490249587 2182 dbSNP
rs1341980462 2193 dbSNP
rs1425901176 2194 dbSNP
rs944601482 2204 dbSNP
rs1052466412 2209 dbSNP
rs1395377762 2210 dbSNP
rs1459755322 2210 dbSNP
rs935355939 2214 dbSNP
rs890529546 2215 dbSNP
rs1298216617 2217 dbSNP
rs1341809159 2226 dbSNP
rs571624763 2234 dbSNP
rs946333669 2241 dbSNP
rs1294760893 2244 dbSNP
rs1051832669 2246 dbSNP
rs1309289145 2250 dbSNP
rs1429874084 2255 dbSNP
rs1246634239 2257 dbSNP
rs1037387774 2258 dbSNP
rs373641819 2259 dbSNP
rs1358938261 2283 dbSNP
rs990547615 2300 dbSNP
rs1265668703 2301 dbSNP
rs959125593 2308 dbSNP
rs1035175274 2310 dbSNP
rs1257407281 2314 dbSNP
rs982327229 2319 dbSNP
rs1165737449 2330 dbSNP
rs932150298 2335 dbSNP
rs1473580028 2336 dbSNP
rs1385025285 2337 dbSNP
rs922106654 2340 dbSNP
rs974029865 2342 dbSNP
rs1420743456 2351 dbSNP
rs961927914 2354 dbSNP
rs942310315 2366 dbSNP
rs551810502 2375 dbSNP
rs528759279 2376 dbSNP
rs1256075087 2377 dbSNP
rs1287789764 2381 dbSNP
rs1379757125 2382 dbSNP
rs888423722 2390 dbSNP
rs1312897411 2393 dbSNP
rs1381731302 2397 dbSNP
rs1483394277 2407 dbSNP
rs1288411488 2412 dbSNP
rs1272391642 2415 dbSNP
rs1028292467 2416 dbSNP
rs1256694333 2419 dbSNP
rs1358818675 2424 dbSNP
rs996873219 2424 dbSNP
rs951060064 2427 dbSNP
rs771232403 2430 dbSNP
rs1040606173 2437 dbSNP
rs1180919259 2437 dbSNP
rs944588011 2437 dbSNP
rs749683719 2449 dbSNP
rs75733844 2456 dbSNP
rs1042270339 2468 dbSNP
rs186295469 2491 dbSNP
rs969175407 2497 dbSNP
rs182092226 2498 dbSNP
rs1281074541 2500 dbSNP
rs1371402557 2503 dbSNP
rs76468101 2509 dbSNP
rs773333059 2510 dbSNP
rs1313992321 2513 dbSNP
rs1406730655 2521 dbSNP
rs1263004735 2525 dbSNP
rs893708263 2528 dbSNP
rs151093347 2531 dbSNP
rs113112635 2535 dbSNP
rs1461216780 2537 dbSNP
rs1370536136 2539 dbSNP
rs1416174691 2541 dbSNP
rs1425515347 2541 dbSNP
rs62096264 2543 dbSNP
rs61200710 2544 dbSNP
rs1428430344 2545 dbSNP
rs754190623 2546 dbSNP
rs759131205 2546 dbSNP
rs1466105821 2547 dbSNP
rs950285393 2547 dbSNP
rs1448476328 2548 dbSNP
rs574849137 2548 dbSNP
rs762813217 2548 dbSNP
rs761573259 2550 dbSNP
rs772341971 2550 dbSNP
rs879694281 2550 dbSNP
rs1232368091 2552 dbSNP
rs917477027 2553 dbSNP
rs775299103 2554 dbSNP
rs775729166 2554 dbSNP
rs1453517663 2558 dbSNP
rs1290905824 2560 dbSNP
rs1480379645 2562 dbSNP
rs1332339268 2563 dbSNP
rs868120836 2564 dbSNP
rs867671760 2566 dbSNP
rs1054825930 2567 dbSNP
rs879091811 2568 dbSNP
rs78577910 2570 dbSNP
rs1246868977 2571 dbSNP
rs8087731 2572 dbSNP
rs796718544 2573 dbSNP
rs11152315 2574 dbSNP
rs1165226499 2574 dbSNP
rs1169542877 2574 dbSNP
rs1196599656 2574 dbSNP
rs1267584764 2574 dbSNP
rs1290627068 2574 dbSNP
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rs1486628684 5862 dbSNP
rs1159639592 5866 dbSNP
rs1260432132 5880 dbSNP
rs537900307 5882 dbSNP
rs1019657555 5893 dbSNP
rs761193983 5911 dbSNP
rs868232611 5912 dbSNP
rs1327632648 5923 dbSNP
rs1346798314 5928 dbSNP
rs889936884 5934 dbSNP
rs986575005 5937 dbSNP
rs954807436 5944 dbSNP
rs1049020096 5947 dbSNP
rs1311546475 5948 dbSNP
rs926212342 5953 dbSNP
rs995703723 5956 dbSNP
rs897402996 5963 dbSNP
rs1290559585 5964 dbSNP
rs1037323608 5966 dbSNP
rs1291654244 5967 dbSNP
rs568989688 5970 dbSNP
rs1259801573 5972 dbSNP
rs1489525378 5973 dbSNP
rs1259339142 5974 dbSNP
rs1157795548 5976 dbSNP
rs1437404103 5979 dbSNP
rs1483253898 5983 dbSNP
rs1212441269 5984 dbSNP
rs1255260598 5991 dbSNP
rs1396472657 5991 dbSNP
rs1485291562 5992 dbSNP
rs1182861070 5994 dbSNP
rs895477834 5995 dbSNP
rs1056853027 5996 dbSNP
rs1158568606 5996 dbSNP
rs1171819087 5996 dbSNP
rs1374963482 5996 dbSNP
rs1417096804 5996 dbSNP
rs1420788791 5996 dbSNP
rs386387915 5996 dbSNP
rs56397865 5996 dbSNP
rs778767287 5996 dbSNP
rs879230604 5996 dbSNP
rs988228533 5998 dbSNP
rs1267108289 5999 dbSNP
rs1312434888 6002 dbSNP
rs1236108586 6007 dbSNP
rs183297864 6013 dbSNP
rs1346610943 6014 dbSNP
rs927089041 6018 dbSNP
rs573275589 6024 dbSNP
rs978991510 6030 dbSNP
rs1031523836 6032 dbSNP
rs1479512893 6036 dbSNP
rs532122629 6037 dbSNP
rs1267849703 6041 dbSNP
rs1455720135 6045 dbSNP
rs1172077178 6047 dbSNP
rs1215203403 6049 dbSNP
rs1394548194 6051 dbSNP
rs1351635809 6058 dbSNP
rs1430503237 6062 dbSNP
rs566504540 6064 dbSNP
rs747961513 6069 dbSNP
rs1173086795 6077 dbSNP
rs1235316284 6078 dbSNP
rs1369974235 6083 dbSNP
rs1000100540 6089 dbSNP
rs546577087 6092 dbSNP
rs11664681 6096 dbSNP
rs1473173281 6100 dbSNP
rs763905504 6101 dbSNP
rs530005111 6105 dbSNP
rs1022628709 6107 dbSNP
rs988692723 6114 dbSNP
rs1214678018 6115 dbSNP
rs560880475 6118 dbSNP
rs965317203 6124 dbSNP
rs1305667614 6126 dbSNP
rs1288251859 6128 dbSNP
rs1020047520 6135 dbSNP
rs755194792 6137 dbSNP
rs1469693951 6142 dbSNP
rs895485040 6143 dbSNP
rs1376762554 6148 dbSNP
rs56255109 6158 dbSNP
rs1450125970 6166 dbSNP
rs1245121735 6172 dbSNP
rs1188385678 6176 dbSNP
rs1417521166 6180 dbSNP
rs1428410280 6187 dbSNP
rs954257177 6193 dbSNP
rs1027103543 6194 dbSNP
rs1460207979 6196 dbSNP
rs72998417 6212 dbSNP
rs897985517 6219 dbSNP
rs1431070422 6223 dbSNP
rs1037855220 6229 dbSNP
rs1359334793 6238 dbSNP
rs1213904429 6239 dbSNP
rs1293847761 6242 dbSNP
rs780288649 6258 dbSNP
rs1211627183 6263 dbSNP
rs1197256099 6269 dbSNP
rs1272731797 6274 dbSNP
rs563394657 6275 dbSNP
rs1465495775 6279 dbSNP
rs141760515 6284 dbSNP
rs549635296 6293 dbSNP
rs910827294 6301 dbSNP
rs189844229 6302 dbSNP
rs1057185132 6307 dbSNP
rs937053560 6308 dbSNP
rs1420689683 6314 dbSNP
rs1474402548 6316 dbSNP
rs905602689 6334 dbSNP
rs765764665 6337 dbSNP
rs1413208528 6357 dbSNP
rs1042827272 6361 dbSNP
rs777389138 6368 dbSNP
rs1211852555 6381 dbSNP
rs1344639614 6382 dbSNP
rs1319943006 6403 dbSNP
rs1342867143 6414 dbSNP
rs947183726 6426 dbSNP
rs536966629 6427 dbSNP
rs988197697 6433 dbSNP
rs1307884694 6439 dbSNP
rs1294701523 6443 dbSNP
rs956806563 6445 dbSNP
rs754202638 6447 dbSNP
rs558303401 6451 dbSNP
rs1282440934 6452 dbSNP
rs540520854 6459 dbSNP
rs912508380 6471 dbSNP
rs575084461 6472 dbSNP
rs1211711447 6478 dbSNP
rs764418657 6490 dbSNP
rs554829172 6494 dbSNP
rs538463047 6503 dbSNP
rs1187950405 6505 dbSNP
rs968656993 6525 dbSNP
rs1471367146 6526 dbSNP
rs148323240 6527 dbSNP
rs974159670 6531 dbSNP
rs1399566847 6532 dbSNP
rs1173694268 6565 dbSNP
rs868100685 6567 dbSNP
rs961508571 6570 dbSNP
rs1376789164 6578 dbSNP
rs959945480 6586 dbSNP
rs1312263203 6604 dbSNP
rs1336068453 6614 dbSNP
rs9963722 6616 dbSNP
rs538786178 6617 dbSNP
rs1463805770 6619 dbSNP
rs1235350398 6621 dbSNP
rs1282554538 6625 dbSNP
rs1013786755 6629 dbSNP
rs1210720362 6635 dbSNP
rs896720110 6639 dbSNP
rs897616406 6646 dbSNP
rs1180138780 6649 dbSNP
rs1232717623 6649 dbSNP
rs557560165 6649 dbSNP
rs9966069 6650 dbSNP
rs1259679187 6658 dbSNP
rs905531251 6665 dbSNP
rs889295249 6670 dbSNP
rs185484246 6682 dbSNP
rs1320403515 6689 dbSNP
rs567575482 6690 dbSNP
rs368059332 6694 dbSNP
rs1397150516 6701 dbSNP
rs1051095444 6703 dbSNP
rs181884551 6706 dbSNP
rs1335018788 6715 dbSNP
rs191155446 6717 dbSNP
rs74779528 6721 dbSNP
rs1339755578 6722 dbSNP
rs1305913966 6723 dbSNP
rs1368789152 6724 dbSNP
rs1233703432 6726 dbSNP
rs1257264752 6728 dbSNP
rs117301234 6730 dbSNP
rs1052460330 6731 dbSNP
rs762490861 6733 dbSNP
rs1469236583 6734 dbSNP
rs1243377557 6735 dbSNP
rs1338213277 6740 dbSNP
rs1049666729 6742 dbSNP
rs932608107 6748 dbSNP
rs1397650004 6752 dbSNP
rs532640311 6753 dbSNP
rs919935625 6754 dbSNP
rs1464492628 6772 dbSNP
rs1395428452 6780 dbSNP
rs1461769959 6783 dbSNP
rs1328121391 6786 dbSNP
rs925393321 6788 dbSNP
rs979521105 6795 dbSNP
rs974129201 6797 dbSNP
rs1296352899 6799 dbSNP
rs968932357 6803 dbSNP
rs1225860128 6804 dbSNP
rs961436918 6811 dbSNP
rs991801979 6821 dbSNP
rs1366805113 6823 dbSNP
rs960007011 6829 dbSNP
rs1466834213 6834 dbSNP
rs1208939191 6840 dbSNP
rs908658442 6844 dbSNP
rs992322245 6846 dbSNP
rs144265767 6849 dbSNP
rs1034308914 6850 dbSNP
rs1475386511 6852 dbSNP
rs1002468355 6857 dbSNP
rs1415452876 6865 dbSNP
rs970100162 6866 dbSNP
rs1289730236 6868 dbSNP
rs1021265041 6874 dbSNP
rs1387159754 6876 dbSNP
rs772915062 6879 dbSNP
rs1469673211 6888 dbSNP
rs961694707 6891 dbSNP
rs769765920 6900 dbSNP
rs1356633328 6903 dbSNP
rs142858315 6906 dbSNP
rs575004228 6911 dbSNP
rs561602975 6917 dbSNP
rs1334675722 6920 dbSNP
rs1005989187 6921 dbSNP
rs1353564786 6924 dbSNP
rs1260947077 6927 dbSNP
rs1352161069 6933 dbSNP
rs1202876617 6938 dbSNP
rs1261904714 6942 dbSNP
rs1485942335 6952 dbSNP
rs1052839360 6955 dbSNP
rs1255124972 6956 dbSNP
rs987595115 6960 dbSNP
rs1008437160 6961 dbSNP
rs890966967 6964 dbSNP
rs187566875 6968 dbSNP
rs1451662719 6973 dbSNP
rs1239288139 6974 dbSNP
rs1050077217 6978 dbSNP
rs1375745168 6981 dbSNP
rs932601867 6995 dbSNP
rs919862897 7000 dbSNP
rs1355142905 7007 dbSNP
rs1306672839 7009 dbSNP
rs1444965530 7010 dbSNP
rs1307198817 7013 dbSNP
rs1052427884 7020 dbSNP
rs748074790 7021 dbSNP
rs138187760 7026 dbSNP
rs940039121 7032 dbSNP
rs1405368071 7035 dbSNP
rs1312661552 7040 dbSNP
rs781017884 7041 dbSNP
rs544954072 7042 dbSNP
rs1482783438 7044 dbSNP
rs1177595405 7045 dbSNP
rs1252452138 7048 dbSNP
rs1417551206 7055 dbSNP
rs879827348 7059 dbSNP
rs915710734 7067 dbSNP
rs926824851 7081 dbSNP
rs981408549 7083 dbSNP
rs145644970 7085 dbSNP
rs968254047 7087 dbSNP
rs1359115744 7095 dbSNP
rs768297669 7099 dbSNP
rs746813307 7100 dbSNP
rs781425105 7101 dbSNP
rs559200395 7104 dbSNP
rs1253397533 7108 dbSNP
rs1371719118 7109 dbSNP
rs1444111531 7127 dbSNP
rs1011192987 7149 dbSNP
rs928519863 7156 dbSNP
rs955708776 7158 dbSNP
rs780192012 7159 dbSNP
rs1352366703 7162 dbSNP
rs1283371073 7163 dbSNP
rs1007988376 7164 dbSNP
rs1252837263 7165 dbSNP
rs1479541615 7166 dbSNP
rs1198167564 7167 dbSNP
rs1373644532 7170 dbSNP
rs1275875626 7174 dbSNP
rs538697654 7182 dbSNP
rs1015898441 7186 dbSNP
rs1028137418 7187 dbSNP
rs572911068 7190 dbSNP
rs755304938 7194 dbSNP
rs997114898 7196 dbSNP
rs898409804 7198 dbSNP
rs1429626753 7205 dbSNP
rs953182404 7206 dbSNP
rs1359993719 7213 dbSNP
rs1038337202 7223 dbSNP
rs1382894770 7233 dbSNP
rs939967097 7236 dbSNP
rs1330226419 7244 dbSNP
rs1436889040 7248 dbSNP
rs887114264 7254 dbSNP
rs1291281835 7255 dbSNP
rs57520734 7257 dbSNP
rs1215025783 7264 dbSNP
rs1297638957 7265 dbSNP
rs1315790900 7269 dbSNP
rs1217809636 7270 dbSNP
rs75478650 7289 dbSNP
rs1469965980 7293 dbSNP
rs1031220084 7295 dbSNP
rs1246190496 7296 dbSNP
rs1486243268 7299 dbSNP
rs567186791 7300 dbSNP
rs903842058 7301 dbSNP
rs980953963 7305 dbSNP
rs77601539 7309 dbSNP
rs895263150 7310 dbSNP
rs1321187774 7334 dbSNP
rs1260501763 7340 dbSNP
rs1430858599 7340 dbSNP
rs754254232 7341 dbSNP
rs988360507 7347 dbSNP
rs1348218398 7358 dbSNP
rs1279740619 7360 dbSNP
rs1218963914 7367 dbSNP
rs181526029 7368 dbSNP
rs938487508 7369 dbSNP
rs1289437080 7377 dbSNP
rs1317555826 7379 dbSNP
rs955674510 7382 dbSNP
rs571060472 7384 dbSNP
rs1488233481 7385 dbSNP
rs986893824 7397 dbSNP
rs940642519 7401 dbSNP
rs1161049486 7402 dbSNP
rs1401146824 7416 dbSNP
rs1339928075 7418 dbSNP
rs1296486768 7421 dbSNP
rs1416832140 7422 dbSNP
rs1359922471 7423 dbSNP
rs1175653595 7425 dbSNP
rs1412487755 7426 dbSNP
rs761676212 7429 dbSNP
rs955137580 7430 dbSNP
rs1477490052 7436 dbSNP
rs1260384308 7437 dbSNP
rs1298793958 7438 dbSNP
rs1401779739 7439 dbSNP
rs1455184791 7440 dbSNP
rs1028526941 7447 dbSNP
rs1236482376 7450 dbSNP
rs1207598719 7454 dbSNP
rs1440981953 7455 dbSNP
rs1275630571 7457 dbSNP
rs1219768389 7458 dbSNP
rs996681303 7459 dbSNP
rs1276895749 7461 dbSNP
rs1283773021 7463 dbSNP
rs1374304663 7464 dbSNP
rs1178634826 7465 dbSNP
rs1187255154 7465 dbSNP
rs1212138816 7465 dbSNP
rs1233856129 7465 dbSNP
rs1283121062 7465 dbSNP
rs1283970496 7465 dbSNP
rs1305782127 7465 dbSNP
rs1348003389 7465 dbSNP
rs1353092576 7465 dbSNP
rs1377887470 7465 dbSNP
rs1382606519 7465 dbSNP
rs1418567722 7465 dbSNP
rs1440998305 7465 dbSNP
rs1470305320 7465 dbSNP
rs34966668 7465 dbSNP
rs953241165 7465 dbSNP
rs1200452264 7468 dbSNP
rs1274132910 7469 dbSNP
rs1439935243 7470 dbSNP
rs1200067514 7471 dbSNP
rs1236014584 7473 dbSNP
rs1438490669 7483 dbSNP
rs1193693516 7484 dbSNP
rs1135529 7499 dbSNP
rs898336287 7501 dbSNP
rs1028708273 7503 dbSNP
rs1016829690 7507 dbSNP
rs11660288 7510 dbSNP
rs1004145773 7514 dbSNP
rs538208168 7515 dbSNP
rs887084483 7521 dbSNP
rs1446179678 7525 dbSNP
rs1356052244 7529 dbSNP
rs1056451227 7532 dbSNP
rs939378223 7534 dbSNP
rs1441967419 7536 dbSNP
rs966170642 7538 dbSNP
rs905272903 7545 dbSNP
rs1233087960 7546 dbSNP
rs1271292815 7554 dbSNP
rs764690933 7555 dbSNP
rs1423828094 7559 dbSNP
rs1257879819 7561 dbSNP
rs946851847 7573 dbSNP
rs1457019440 7574 dbSNP
rs1031202123 7582 dbSNP
rs1179749547 7611 dbSNP
rs1470990805 7612 dbSNP
rs1242652549 7614 dbSNP
rs1478788313 7616 dbSNP
rs999760046 7617 dbSNP
rs12607054 7625 dbSNP
rs1422742215 7648 dbSNP
rs1462149074 7657 dbSNP
rs551168020 7664 dbSNP
rs1167387046 7669 dbSNP
rs1388588097 7670 dbSNP
rs904144507 7673 dbSNP
rs79690519 7685 dbSNP
rs1328686260 7689 dbSNP
rs1012213548 7696 dbSNP
rs1398742448 7704 dbSNP
rs988327172 7714 dbSNP
rs566977461 7716 dbSNP
rs546552766 7719 dbSNP
rs935565718 7720 dbSNP
rs1335995355 7723 dbSNP
rs1056527884 7737 dbSNP
rs190276667 7739 dbSNP
rs986477591 7740 dbSNP
rs955256727 7747 dbSNP
rs530088494 7750 dbSNP
rs1489227402 7754 dbSNP
rs779733233 7757 dbSNP
rs975170833 7757 dbSNP
rs1475414568 7758 dbSNP
rs1189832852 7760 dbSNP
rs940611451 7766 dbSNP
rs1322403474 7775 dbSNP
rs909166130 7786 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000312828.3 | 3UTR | UCAAGAAUAUUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
133 hsa-miR-4680-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT378771 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT393867 ZDHHC21 zinc finger DHHC-type containing 21 2 4
MIRT446684 C2CD2 C2 calcium dependent domain containing 2 2 2
MIRT447600 MRPL3 mitochondrial ribosomal protein L3 2 2
MIRT450708 RNF152 ring finger protein 152 2 2
MIRT450784 PAPOLG poly(A) polymerase gamma 2 2
MIRT454623 COL23A1 collagen type XXIII alpha 1 chain 2 8
MIRT461620 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT462695 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT475530 HOXA3 homeobox A3 2 8
MIRT475739 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT489676 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT490610 SLC47A1 solute carrier family 47 member 1 2 2
MIRT493628 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT496152 RPS15A ribosomal protein S15a 2 2
MIRT499232 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT501496 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT507163 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT512389 MTRNR2L1 MT-RNR2-like 1 2 4
MIRT514626 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT517474 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT525332 CNGB1 cyclic nucleotide gated channel beta 1 2 2
MIRT526685 BAK1 BCL2 antagonist/killer 1 2 2
MIRT527317 CCR2 C-C motif chemokine receptor 2 2 2
MIRT527608 EYS eyes shut homolog (Drosophila) 2 2
MIRT528794 RAB32 RAB32, member RAS oncogene family 2 2
MIRT531048 TIPARP TCDD inducible poly(ADP-ribose) polymerase 2 2
MIRT532254 TBPL2 TATA-box binding protein like 2 2 2
MIRT533801 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT535887 MLEC malectin 2 2
MIRT540704 PDPK1 3-phosphoinositide dependent protein kinase 1 2 4
MIRT544645 PHF8 PHD finger protein 8 2 4
MIRT545760 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT555310 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 2
MIRT555877 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 4
MIRT559507 ARID5B AT-rich interaction domain 5B 2 2
MIRT560448 SLC30A7 solute carrier family 30 member 7 2 2
MIRT561262 ZIK1 zinc finger protein interacting with K protein 1 2 2
MIRT561795 PAWR pro-apoptotic WT1 regulator 2 2
MIRT567007 KLHL15 kelch like family member 15 2 2
MIRT569298 SURF6 surfeit 6 2 2
MIRT570606 MTRNR2L11 MT-RNR2-like 11 2 2
MIRT572888 ADCY2 adenylate cyclase 2 2 2
MIRT573119 ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 2 2
MIRT608332 ZNF670 zinc finger protein 670 2 6
MIRT614942 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT615324 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT618441 ZNF800 zinc finger protein 800 2 2
MIRT620110 HARBI1 harbinger transposase derived 1 2 2
MIRT626008 ZNF517 zinc finger protein 517 2 2
MIRT626626 SLC30A6 solute carrier family 30 member 6 2 2
MIRT627842 POU3F1 POU class 3 homeobox 1 2 2
MIRT628386 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT629305 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT629864 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630444 IDE insulin degrading enzyme 2 2
MIRT631854 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT633173 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633477 ZNF724P zinc finger protein 724 2 2
MIRT634395 PLSCR1 phospholipid scramblase 1 2 2
MIRT635538 TRIM72 tripartite motif containing 72 2 2
MIRT635821 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT636169 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT636797 CYB5D1 cytochrome b5 domain containing 1 2 2
MIRT637952 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT645136 HES2 hes family bHLH transcription factor 2 2 2
MIRT645667 ADK adenosine kinase 2 2
MIRT646148 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT647004 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT648187 C2orf68 chromosome 2 open reading frame 68 2 2
MIRT650090 TERF2 telomeric repeat binding factor 2 2 2
MIRT650329 RTN2 reticulon 2 2 2
MIRT654224 RNF165 ring finger protein 165 2 2
MIRT654545 RAB1A RAB1A, member RAS oncogene family 2 2
MIRT656457 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT656828 KLF8 Kruppel like factor 8 2 2
MIRT657112 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT657930 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT659375 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT659833 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT662108 LACTB lactamase beta 2 4
MIRT662789 TBC1D25 TBC1 domain family member 25 2 2
MIRT669501 ARL3 ADP ribosylation factor like GTPase 3 2 2
MIRT669759 ZNF101 zinc finger protein 101 2 4
MIRT669800 GAN gigaxonin 2 2
MIRT670050 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT670299 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670388 EMP2 epithelial membrane protein 2 2 2
MIRT672862 C22orf29 retrotransposon Gag like 10 2 2
MIRT672890 FXN frataxin 2 2
MIRT673210 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT674001 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT674163 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674502 TIRAP TIR domain containing adaptor protein 2 2
MIRT675470 NUBPL nucleotide binding protein like 2 2
MIRT675671 TMOD2 tropomodulin 2 2 2
MIRT676006 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676074 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676386 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676764 SNX2 sorting nexin 2 2 2
MIRT676896 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT676978 ZNF708 zinc finger protein 708 2 2
MIRT677236 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677369 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT677464 PDLIM3 PDZ and LIM domain 3 2 2
MIRT678081 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678093 ATCAY ATCAY, caytaxin 2 2
MIRT678324 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678417 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678521 ZNF347 zinc finger protein 347 2 2
MIRT678700 TRIP11 thyroid hormone receptor interactor 11 2 2
MIRT678829 PDE6A phosphodiesterase 6A 2 2
MIRT679991 RUNDC1 RUN domain containing 1 2 2
MIRT680751 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT681249 ZNF383 zinc finger protein 383 2 2
MIRT681422 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT681948 SLC19A3 solute carrier family 19 member 3 2 2
MIRT689278 C5AR2 complement component 5a receptor 2 2 2
MIRT690389 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT691845 OSCAR osteoclast associated, immunoglobulin-like receptor 2 2
MIRT693863 IYD iodotyrosine deiodinase 2 2
MIRT696002 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT701930 MLLT1 MLLT1, super elongation complex subunit 2 2
MIRT702341 KLHL7 kelch like family member 7 2 2
MIRT703557 FKBP14 FK506 binding protein 14 2 2
MIRT705033 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT706341 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT709671 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT711212 EFHB EF-hand domain family member B 2 2
MIRT718342 PURA purine rich element binding protein A 2 2
MIRT722755 SIRPB2 signal regulatory protein beta 2 2 2
MIRT723535 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 2
MIRT724498 BFAR bifunctional apoptosis regulator 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4680-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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