miRTarBase - #MIRT451570


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pre-miRNA Information
pre-miRNA hsa-mir-3689d-1   
Genomic Coordinates chr9: 134849609 - 134849682
Description Homo sapiens miR-3689d-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3689d-2   
Genomic Coordinates chr9: 134850277 - 134850356
Description Homo sapiens miR-3689d-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3689d
Sequence 2| GGGAGGUGUGAUCUCACACUCG |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551722268 8 dbSNP
rs143142996 8 dbSNP
rs1236297052 12 dbSNP
rs573148947 14 dbSNP
rs1210004979 14 dbSNP
rs1217460444 14 dbSNP
rs762590109 18 dbSNP
rs574332265 18 dbSNP
rs1164353021 21 dbSNP
rs963741171 21 dbSNP
rs1177416877 22 dbSNP
rs765777344 22 dbSNP
Putative Targets

Gene Information
Gene Symbol CIAPIN1   
Synonyms Anamorsin, DRE2, PRO0915
Description cytokine induced apoptosis inhibitor 1
Transcript NM_020313   
Expression
Putative miRNA Targets on CIAPIN1
3'UTR of CIAPIN1
(miRNA target sites are highlighted)		 
>CIAPIN1|NM_020313|3'UTR
   1 GAGGTTCCTGACATGGGACCCATCTGCTCCTCCAGCCAACTCCTGTCCCTCACATCCCACCATGGTGGCTCCTCCCACCT
  81 CCTCTGGATTTGTTCACTCTGAGATCTGTTTGCAGAGTGGGTGCTTAGCAGACAGAGTGAAGCTGGCTGGGGGGCACAGT
 161 GGTGTGTAGTGCTGCTGTGTATCAAAAGACCAAGGTATTATGGGACCTGGTTTCAGAATGGGATGGGTTTCTTCACCTCA
 241 TGTTAAGAGAAGGGAGTGTGTCCTGAAGAAGCCCTTCTTCTGATGTTAAAATGCTGACCAGAACGCTCTTGAGCCCAGGC
 321 ATCGTTGAGCATTAACACTCTGTGACAGAGCTGCAGACCCCTGCCTTGAGTCTCATCTCAGCAATGCTGCCACCCTCTTG
 401 TCTTTCAGAGTTGTTAGTTTACTCCATTCTTTGTGACACGAGTCAAGTGGCTCACAACCTCCTCAGGGCACCAGAGGACT
 481 CACTCACTGGTTGCTGTGATGATATCCAGTGTCCCTCTGCCCCCTTCCATCCCCAACCACATTTGACTGTAGCATTGCAT
 561 CTGTGTCCTGTTGTCATTTATGTTAACCTTCAGGTATTAAACTTGCTGCATATCTTGACATATCTTGAGATTCTGCATGT
 641 CTTGTAAAGAGAGGGGATGTGCATTTGTGTGTGATGTTGGATAGTCATCCACGCTCAGTTTGGACCATTGGAGGAACTTA
 721 GTGTCACGCACAAATGGGGCTATTCCTACGCTTAGAATAGGGCTTGTCTGCCCACTTTAGAAGAGTCCAGGTTGGTGAGC
 801 ATTTAGAGGGAAGCAGGGCAGAACTCTGAACGACAATACGTCTCTCTGAGCAGAGACCCCTTTGTTCTTGTTATCCACCC
 881 ATATGGACTTGGAATCAATCTTGCCAAATATTTGGAGAGATTGTGTGGATTTAAGAGACCTGGATTTTTATATTTTACCA
 961 GTAAATAAAAGTTTTCATTGATATCTGTCCTTGAAACTTGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gcUCACACUCUAGUGUGGAGGg 5'
            :|||     || ||||||| 
Target 5' atGGTGGCTCCTCCCACCTCCt 3'
 62 - 83 148.00 -17.30
2 
miRNA  3' gcUCA---CACUCUAGUG-UGGAGGg 5'
            |||   ||| | |||| |||||| 
Target 5' cgAGTCAAGTG-GCTCACAACCTCCt 3'
 439 - 463 135.00 -22.90
3 
miRNA  3' gcUCACACUCUA-------GUGUGGAGgg 5'
            ||  ||:|||       : ||||||  
Target 5' tcAGAATGGGATGGGTTTCTTCACCTCat 3'
 213 - 241 128.00 -15.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30154892 26 COSMIC
COSN8601818 96 COSMIC
COSN1188323 181 COSMIC
COSN7261789 192 COSMIC
COSN1701220 663 COSMIC
COSN7261788 755 COSMIC
COSN195187 877 COSMIC
COSN22645470 983 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1453654571 3 dbSNP
rs1351137631 5 dbSNP
rs777129392 11 dbSNP
rs1361047175 16 dbSNP
rs370290851 40 dbSNP
rs747083763 42 dbSNP
rs778018151 43 dbSNP
rs1401354174 45 dbSNP
rs747957183 49 dbSNP
rs756334040 62 dbSNP
rs554370013 68 dbSNP
rs1202037717 73 dbSNP
rs1279048481 74 dbSNP
rs1294174596 79 dbSNP
rs1441497537 97 dbSNP
rs1185254222 102 dbSNP
rs1263551320 104 dbSNP
rs367916874 111 dbSNP
rs1253377640 112 dbSNP
rs536357279 115 dbSNP
rs569188131 117 dbSNP
rs1362607755 118 dbSNP
rs1468024599 121 dbSNP
rs750544408 122 dbSNP
rs1338835934 129 dbSNP
rs536042144 150 dbSNP
rs1310035664 151 dbSNP
rs140102313 152 dbSNP
rs553581852 153 dbSNP
rs1385612356 154 dbSNP
rs547843808 155 dbSNP
rs1160065873 166 dbSNP
rs1275222430 169 dbSNP
rs1346826162 170 dbSNP
rs1455481995 170 dbSNP
rs1410765191 171 dbSNP
rs1165274533 172 dbSNP
rs1475993303 174 dbSNP
rs1235177031 176 dbSNP
rs1208303424 178 dbSNP
rs767691099 181 dbSNP
rs1483160975 196 dbSNP
rs763193245 201 dbSNP
rs774746478 205 dbSNP
rs761906411 208 dbSNP
rs768989883 213 dbSNP
rs1464778629 217 dbSNP
rs1274026415 219 dbSNP
rs146238938 241 dbSNP
rs1429338014 246 dbSNP
rs774122300 257 dbSNP
rs1392886438 260 dbSNP
rs1354511186 268 dbSNP
rs764000279 274 dbSNP
rs1324068491 276 dbSNP
rs1283625869 294 dbSNP
rs1228308785 302 dbSNP
rs1231858299 304 dbSNP
rs1326921894 305 dbSNP
rs571218937 307 dbSNP
rs372263904 314 dbSNP
rs1322547081 315 dbSNP
rs867098526 317 dbSNP
rs1387567761 318 dbSNP
rs1326342720 321 dbSNP
rs141709574 323 dbSNP
rs1411207627 324 dbSNP
rs749689577 329 dbSNP
rs1391112590 331 dbSNP
rs538569544 336 dbSNP
rs1168547443 337 dbSNP
rs1370289599 340 dbSNP
rs1162100671 350 dbSNP
rs1458516572 354 dbSNP
rs1162706431 364 dbSNP
rs56116948 373 dbSNP
rs762679890 382 dbSNP
rs1475476974 384 dbSNP
rs1375277997 385 dbSNP
rs1365611602 396 dbSNP
rs1381324736 397 dbSNP
rs1293059159 401 dbSNP
rs1323117134 414 dbSNP
rs1187290061 418 dbSNP
rs1333358583 421 dbSNP
rs1211050124 426 dbSNP
rs567946716 428 dbSNP
rs188722211 429 dbSNP
rs1185116504 434 dbSNP
rs56150023 439 dbSNP
rs1424607608 440 dbSNP
rs1187382701 442 dbSNP
rs113582457 445 dbSNP
rs1289482571 456 dbSNP
rs1161223355 457 dbSNP
rs560639226 464 dbSNP
rs1389263207 468 dbSNP
rs1452841888 469 dbSNP
rs1286898882 471 dbSNP
rs1380966009 474 dbSNP
rs551543363 476 dbSNP
rs1292143283 478 dbSNP
rs368591924 505 dbSNP
rs373032693 506 dbSNP
rs1269373027 507 dbSNP
rs533378816 519 dbSNP
rs1316809089 522 dbSNP
rs184169089 523 dbSNP
rs1258119526 524 dbSNP
rs544178718 529 dbSNP
rs1438402853 536 dbSNP
rs1255521516 544 dbSNP
rs1473643244 549 dbSNP
rs1182951133 553 dbSNP
rs1347721766 559 dbSNP
rs1418421010 571 dbSNP
rs1322549331 587 dbSNP
rs1410023360 598 dbSNP
rs1466257377 601 dbSNP
rs1371804801 602 dbSNP
rs1311843091 604 dbSNP
rs1373214270 611 dbSNP
rs531533121 614 dbSNP
rs1449350348 621 dbSNP
rs1373318453 629 dbSNP
rs1396263384 637 dbSNP
rs1195859987 638 dbSNP
rs560839275 639 dbSNP
rs1246333938 651 dbSNP
rs1278510262 654 dbSNP
rs369567143 656 dbSNP
rs1484157681 667 dbSNP
rs1206034971 673 dbSNP
rs1182733434 674 dbSNP
rs377423246 680 dbSNP
rs547493888 681 dbSNP
rs1427031910 689 dbSNP
rs1454584571 692 dbSNP
rs1204557415 693 dbSNP
rs1341341069 696 dbSNP
rs1431239686 698 dbSNP
rs1281001281 703 dbSNP
rs1220730355 705 dbSNP
rs1328960513 707 dbSNP
rs148252667 708 dbSNP
rs1353347616 716 dbSNP
rs1365295864 725 dbSNP
rs1440688955 727 dbSNP
rs1274041589 728 dbSNP
rs1368879576 730 dbSNP
rs143160568 731 dbSNP
rs1301690281 734 dbSNP
rs776185885 736 dbSNP
rs770426982 739 dbSNP
rs1272421811 744 dbSNP
rs1436100180 747 dbSNP
rs748696018 749 dbSNP
rs1305586053 750 dbSNP
rs1192835789 761 dbSNP
rs1250842787 778 dbSNP
rs1450948617 779 dbSNP
rs1168094837 783 dbSNP
rs1418323268 783 dbSNP
rs1428588331 787 dbSNP
rs1166289009 790 dbSNP
rs544751685 791 dbSNP
rs1395929871 796 dbSNP
rs1440745130 805 dbSNP
rs1376591081 813 dbSNP
rs1178942619 815 dbSNP
rs1413281643 816 dbSNP
rs1324309615 818 dbSNP
rs1424823251 818 dbSNP
rs1367749197 822 dbSNP
rs1431784063 825 dbSNP
rs779307751 825 dbSNP
rs1159543662 826 dbSNP
rs1337655989 828 dbSNP
rs1473668803 828 dbSNP
rs1249955778 830 dbSNP
rs1230160998 831 dbSNP
rs149539447 831 dbSNP
rs556231118 832 dbSNP
rs1212916367 833 dbSNP
rs550723892 836 dbSNP
rs190531796 839 dbSNP
rs137898439 840 dbSNP
rs1310371875 842 dbSNP
rs1277604678 850 dbSNP
rs1474215562 853 dbSNP
rs1183112453 854 dbSNP
rs1417872292 855 dbSNP
rs1461410813 857 dbSNP
rs565409419 859 dbSNP
rs1391437404 860 dbSNP
rs1401687564 861 dbSNP
rs777268056 873 dbSNP
rs1318066188 876 dbSNP
rs1450394701 882 dbSNP
rs1224149378 883 dbSNP
rs555737739 892 dbSNP
rs534413663 893 dbSNP
rs1291409058 894 dbSNP
rs757875605 903 dbSNP
rs1286145816 906 dbSNP
rs749615599 908 dbSNP
rs1355478620 917 dbSNP
rs867673619 919 dbSNP
rs1444931033 922 dbSNP
rs55703233 923 dbSNP
rs549895246 924 dbSNP
rs1257634654 937 dbSNP
rs1474625032 943 dbSNP
rs1185112564 961 dbSNP
rs1446415694 962 dbSNP
rs1158364672 971 dbSNP
rs1359120130 971 dbSNP
rs1383168356 973 dbSNP
rs79500219 978 dbSNP
rs752631084 984 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     || ||||||| 
Target 5' -------cuccUCCCACCUCCu 3'
 		1 - 15
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_020313 | 3UTR | CUCCCACCUCCUCUGGAUUUGUUCACUCUGAGAUCUGUUUGCAGAGUGGGUGCUUAGCAGACAGAGUGAAGCUGGCUGGGGGGCACAGUGGUGUGUAGUGCUGCUGUGUAUCAAAAGACCAAGGUAUUAUGGGACCUGGUUUCAGAAUGGGAUGGGUUUCUUCACCUCAUGUUAAGAGAAGGGAGUGUGUCCUGAAGAAGCCCUUCUUCUGAUGUUAAAAUGCUGACCAGAACGCUCUUGAGCCCAGGCAUCGUUGAGCAUUAACACUCUGUGACAGAGCUGCAGACCCCUGCCUUGAGUCUCAUCUCAGCAAUGCUGCCACCCUCUUGUCUUUCAGAGUUGUUAGUUUACUCCAUUCUUUGUGACACGAGUCAAGUGGCUCACAACCUCCUCAGGGCACCAGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_020313 | 3UTR | CCUCCCACCUCCUCUGGAUUUGUUCACUCUGAGAUCUGUUUGCAGAGUGGGUGCUUAGCAGACAGAGUGAAGCUGGCUGGGGGGCACAGUGGUGUGUAGUGCUGCUGUGUAUCAAAAGACCAAGGUAUUAUGGGACCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_020313 | 3UTR | UCCUCCCACCUCCUCUGGAUUUGUUCACUCUGAGAUCUGUUUGCAGAGUGGGUGCUUAGCAGACAGAGUGAAGCUGGCUGGGGGGCACAGUGGUGUGUAGUGCUGCUGUGUAUCAAAAGACCAAGGUAUUAUGGGACCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_020313 | 3UTR | CCCACCUCCUCUGGAUUUGUUCACUCUGAGAUCUGUUUGCAGAGUGGGUGCUUAGCAGACAGAGUGAAGCUGGCUGGGGGGCACAGUGGUGUGUAGUGCUGCUGUGUAUCAAAAGACCAAGGUAUUAUGGGACCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_020313 | 3UTR | UCCUCCCACCUCCUCUGGAUUUGUUCACUCUGAGAUCUGUUUGCAGAGUGGGUGCUUAGCAGACAGAGUGAAGCUGGCUGGGGGGCACAGUGGUGUGUAGUGCUGCUGUGUAUCAAAAGACCAAGGUAUUAUGGGACCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_020313 | 3UTR | CUCCUCCCACCUCCUCUGGAUUUGUUCACUCUGAGAUCUGUUUGCAGAGUGGGUGCUUAGCAGACAGAGUGAAGCUGGCUGGGGGGCACAGUGGUGUGUAGUGCUGCUGUGUAUCAAAAGACCAAGGUAUUAUGGGACCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000565961.1 | 3UTR | CUCCUCCCACCUCCUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
231 hsa-miR-3689d Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059166 TXNIP thioredoxin interacting protein 2 4
MIRT080699 KIAA1468 KIAA1468 2 2
MIRT218770 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT278059 KHNYN KH and NYN domain containing 2 2
MIRT345933 EIF4A1 eukaryotic translation initiation factor 4A1 2 2
MIRT366238 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT449689 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT451149 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451266 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT451375 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451570 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451585 HIRIP3 HIRA interacting protein 3 2 2
MIRT451614 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451763 ZNF611 zinc finger protein 611 2 6
MIRT452383 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452573 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452735 PTGES3L prostaglandin E synthase 3 like 2 6
MIRT452867 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452975 CABP4 calcium binding protein 4 2 2
MIRT453215 CERS1 ceramide synthase 1 2 2
MIRT453259 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453449 GLG1 golgi glycoprotein 1 2 2
MIRT453479 PITPNM3 PITPNM family member 3 2 2
MIRT453663 CD207 CD207 molecule 2 6
MIRT453724 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453760 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT454181 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454330 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT454338 CDKL1 cyclin dependent kinase like 1 2 2
MIRT454427 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454665 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454825 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT455130 TBC1D25 TBC1 domain family member 25 2 2
MIRT455166 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455416 RXRB retinoid X receptor beta 2 2
MIRT455668 GLO1 glyoxalase I 2 2
MIRT455999 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456446 TMEM81 transmembrane protein 81 2 2
MIRT456642 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT456728 TMEM239 transmembrane protein 239 2 2
MIRT457131 ASPH aspartate beta-hydroxylase 2 2
MIRT457157 MXRA7 matrix remodeling associated 7 2 2
MIRT457358 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457458 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457619 UPK3BL uroplakin 3B like 1 2 2
MIRT457692 ZNF587 zinc finger protein 587 2 2
MIRT457727 SMOX spermine oxidase 2 2
MIRT457788 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457875 THEM6 thioesterase superfamily member 6 2 4
MIRT457909 ZNF212 zinc finger protein 212 2 2
MIRT458395 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT458496 MARVELD2 MARVEL domain containing 2 2 2
MIRT458544 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT458577 TCOF1 treacle ribosome biogenesis factor 1 2 2
MIRT458732 CES2 carboxylesterase 2 2 2
MIRT458814 ZNF843 zinc finger protein 843 2 2
MIRT458931 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459341 ZNF17 zinc finger protein 17 2 2
MIRT459365 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459572 NLGN2 neuroligin 2 2 2
MIRT460015 DTX3L deltex E3 ubiquitin ligase 3L 2 4
MIRT460144 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460653 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460798 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT461058 KCNK6 potassium two pore domain channel subfamily K member 6 2 4
MIRT461458 SLC19A3 solute carrier family 19 member 3 2 2
MIRT461572 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461927 TNFSF14 TNF superfamily member 14 2 2
MIRT461953 C3 complement C3 2 2
MIRT462278 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT462744 EFNB1 ephrin B1 2 2
MIRT463136 ZNF451 zinc finger protein 451 2 4
MIRT463566 ZBTB39 zinc finger and BTB domain containing 39 2 6
MIRT463866 WNT7B Wnt family member 7B 2 2
MIRT464326 UST uronyl 2-sulfotransferase 2 2
MIRT464796 UBE2F ubiquitin conjugating enzyme E2 F (putative) 2 2
MIRT465034 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT466207 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT467007 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467029 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT468001 SKI SKI proto-oncogene 2 2
MIRT468031 SIKE1 suppressor of IKBKE 1 2 6
MIRT468575 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT468834 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT468970 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469450 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470888 PLXND1 plexin D1 2 2
MIRT470953 PKM pyruvate kinase, muscle 2 2
MIRT471828 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472590 NACC1 nucleus accumbens associated 1 2 2
MIRT472805 MTMR12 myotubularin related protein 12 2 2
MIRT472818 MTMR10 myotubularin related protein 10 2 6
MIRT472914 MSN moesin 2 2
MIRT474558 KLHDC3 kelch domain containing 3 2 2
MIRT474716 KIF13A kinesin family member 13A 2 6
MIRT475279 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475300 IFNLR1 interferon lambda receptor 1 2 2
MIRT475759 HDLBP high density lipoprotein binding protein 2 2
MIRT475786 HDGF heparin binding growth factor 2 2
MIRT475933 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476212 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT476238 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 4
MIRT476799 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477988 DNAL1 dynein axonemal light chain 1 2 2
MIRT478317 DDN dendrin 2 2
MIRT479257 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479344 CEP97 centrosomal protein 97 2 2
MIRT479522 CDCA4 cell division cycle associated 4 2 2
MIRT479906 CCDC117 coiled-coil domain containing 117 2 6
MIRT481147 AVL9 AVL9 cell migration associated 2 6
MIRT481735 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482089 ALG8 ALG8, alpha-1,3-glucosyltransferase 2 2
MIRT482389 AEN apoptosis enhancing nuclease 2 2
MIRT483093 TFPI tissue factor pathway inhibitor 2 2
MIRT484246 ANK1 ankyrin 1 2 2
MIRT484342 EPN1 epsin 1 2 4
MIRT489141 C5orf38 chromosome 5 open reading frame 38 2 2
MIRT489163 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489547 SOX11 SRY-box 11 2 4
MIRT489780 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489799 KRT80 keratin 80 2 6
MIRT490535 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT492198 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492283 SHISA6 shisa family member 6 2 4
MIRT501059 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT501094 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503870 CBS cystathionine-beta-synthase 2 2
MIRT507981 BCL2L13 BCL2 like 13 2 4
MIRT508125 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT508205 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508385 SPTBN2 spectrin beta, non-erythrocytic 2 2 4
MIRT510308 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT510462 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512227 ATXN3 ataxin 3 2 8
MIRT512665 STEAP3 STEAP3 metalloreductase 2 2
MIRT514184 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT515053 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515138 ZNF799 zinc finger protein 799 2 4
MIRT515452 ZNF747 zinc finger protein 747 2 2
MIRT515791 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT515905 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT516129 MRPS16 mitochondrial ribosomal protein S16 2 6
MIRT516679 ZNF860 zinc finger protein 860 2 4
MIRT516750 ZNF100 zinc finger protein 100 2 2
MIRT516971 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT517491 NPAP1 nuclear pore associated protein 1 2 2
MIRT517774 PROM2 prominin 2 2 2
MIRT517938 ZNF431 zinc finger protein 431 2 4
MIRT518386 ZNF250 zinc finger protein 250 2 2
MIRT520621 TMEM41B transmembrane protein 41B 2 2
MIRT521028 SLC30A5 solute carrier family 30 member 5 2 2
MIRT521454 RAD51 RAD51 recombinase 2 2
MIRT521564 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT521581 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT522263 NKRF NFKB repressing factor 2 2
MIRT522410 MXI1 MAX interactor 1, dimerization protein 2 2
MIRT522543 MED28 mediator complex subunit 28 2 6
MIRT522915 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT523029 IGF1 insulin like growth factor 1 2 2
MIRT523854 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT524184 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524520 CDK19 cyclin dependent kinase 19 2 2
MIRT524674 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT530257 ZNF620 zinc finger protein 620 2 2
MIRT540691 BMP3 bone morphogenetic protein 3 2 2
MIRT540976 C17orf85 nuclear cap binding subunit 3 2 2
MIRT545505 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT545631 GGCX gamma-glutamyl carboxylase 2 2
MIRT547358 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT550701 MPL MPL proto-oncogene, thrombopoietin receptor 2 4
MIRT550717 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551203 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT553999 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT561081 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT563523 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT564463 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565233 TRAF6 TNF receptor associated factor 6 2 2
MIRT566618 NKAP NFKB activating protein 2 2
MIRT569527 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569639 QPCT glutaminyl-peptide cyclotransferase 2 2
MIRT570253 SSPN sarcospan 2 2
MIRT570570 OTUD7B OTU deubiquitinase 7B 2 2
MIRT570621 MTF2 metal response element binding transcription factor 2 2 2
MIRT571098 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 2
MIRT575196 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575554 Cd99 CD99 antigen 2 2
MIRT575634 Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like 2 2
MIRT608267 NOP14 NOP14 nucleolar protein 2 2
MIRT609314 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT627670 RPL28 ribosomal protein L28 2 2
MIRT631185 TSPAN14 tetraspanin 14 2 2
MIRT631964 YIPF5 Yip1 domain family member 5 2 2
MIRT632885 GINM1 glycoprotein integral membrane 1 2 2
MIRT642618 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT645609 TSPAN6 tetraspanin 6 2 2
MIRT662227 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662329 MYLK3 myosin light chain kinase 3 2 2
MIRT662725 LRRC3C leucine rich repeat containing 3C 2 2
MIRT665520 USP14 ubiquitin specific peptidase 14 2 2
MIRT666634 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT668969 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT670925 DESI1 desumoylating isopeptidase 1 2 2
MIRT673939 ZNF500 zinc finger protein 500 2 2
MIRT674675 PLCE1 phospholipase C epsilon 1 2 2
MIRT675230 MAK male germ cell associated kinase 2 2
MIRT680864 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT681047 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681105 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT683553 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684508 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684812 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT685981 CCDC77 coiled-coil domain containing 77 2 2
MIRT686709 TBC1D19 TBC1 domain family member 19 2 2
MIRT686867 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688908 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT691208 KLHL30 kelch like family member 30 2 2
MIRT692298 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT694380 MTA1 metastasis associated 1 2 2
MIRT696497 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT700686 POLR3D RNA polymerase III subunit D 2 2
MIRT701088 PAPOLG poly(A) polymerase gamma 2 2
MIRT703373 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT706189 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT706648 SMIM19 small integral membrane protein 19 2 2
MIRT709466 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT709699 DMWD DM1 locus, WD repeat containing 2 2
MIRT710693 LYRM4 LYR motif containing 4 2 2
MIRT713457 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT722409 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
MIRT725391 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT725548 DNMT3A DNA methyltransferase 3 alpha 2 2

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