miRTarBase - #MIRT453259


—
pre-miRNA Information
pre-miRNA hsa-mir-3689d-1   
Genomic Coordinates chr9: 134849609 - 134849682
Description Homo sapiens miR-3689d-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3689d-2   
Genomic Coordinates chr9: 134850277 - 134850356
Description Homo sapiens miR-3689d-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3689d
Sequence 2| GGGAGGUGUGAUCUCACACUCG |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551722268 8 dbSNP
rs143142996 8 dbSNP
rs1236297052 12 dbSNP
rs573148947 14 dbSNP
rs1210004979 14 dbSNP
rs1217460444 14 dbSNP
rs762590109 18 dbSNP
rs574332265 18 dbSNP
rs1164353021 21 dbSNP
rs963741171 21 dbSNP
rs1177416877 22 dbSNP
rs765777344 22 dbSNP
Putative Targets

Gene Information
Gene Symbol PARP11   
Synonyms ARTD11, C12orf6, MIB006
Description poly(ADP-ribose) polymerase family member 11
Transcript NM_020367   
Expression
Putative miRNA Targets on PARP11
3'UTR of PARP11
(miRNA target sites are highlighted)		 
>PARP11|NM_020367|3'UTR
   1 TTTCACTTCCAAATCTCGGTGGTCAAGGAAGCTTTATTCTTTTTTGCAGGAAGGTTTGCTCTTCAGTCATCTAGCCACTA
  81 AATGTTAATTATCTGATACTTTTGAAACAGATATGAAAAAAAGTGGCCTCCATATAAAAAGACATACTGACTTCAAGGTT
 161 GGTTTTTGTTGTTTTGTTTTTGCCTGTTTCTTGTAGTCTTGTTTGTTAAAAGTTGATATCATTGATGTTTTAACACATAG
 241 GGGTGAAAGATACCATTCAAAATGGAATCAGCTGAGTCTCAACTAATGTGGTCATTGAGATCTTTAAAGTTTACGTGTGT
 321 GTTATCAGGATAAATGATTTTAGTTTAAATAGACTTATTCGTATAAATGTTGAAAAAAAATACAGACATAAATGTGTCCC
 401 TTTAGAGGAATTGATCCTTTGTAAATTGAATTCAGGTAGTAGTATCATCCACCAATCCATCTGTTGCTTTGTTGGTCTTC
 481 TGAAGGGGGGATTTAAAACTCTGAAACAGTCTGAGCACCTTGAGAGAAATCAGAAACAAGACAATTATTTGCAGTGCTGT
 561 CAAACAAGCCAGAAGGAGAAAATCAAGGTAGAATGCCCCACTTTCCAGTTGCCTTAGGATAGCAGGCTGCAGCCTCAGAC
 641 TTGATCCTGTCATTCTCCTCTGTCTCCCACATCTGAATTGATAATTGCTGCAAAATGTCATTAGCCTACACTTCATCCAT
 721 CAGGGCTCTTGGATTCTTACACCACGACTTGCTGTGCAAGGTGTTTATTGCATCTTCAAAGTGAAACTTTAAATTATTAT
 801 TCAAACATTTATTTTCCTTTTGTTTTAAAAAGAGTCCCTACAATGATCACTTCTAAGATTTTTTTTTACCTTCCCCTCTG
 881 CAGCACACACAGCTATTCAACAATGATTTCTAAAATTCATATTTCAAATTTGTATCTCTCCATTTTGAAACATTATAGAA
 961 AGCATGGGATGCTTGAGACAAATCTGGTTTCTCCTTTGAAGTAGCTGTTGACAACCTACTCTCTTGAAAAGTTAGATATA
1041 ATTCTTAATCATGTTTAGTGGAAATTTGTTTACCTGTTCCATCTGTTTTGCTGTTTCATTGTAAGGAAGATGAGAAGTGT
1121 TGGAACAGCTTCCCTCCCCTAAAGGTATTCTAGCAGAGGCGAGACAGCAACTTGGCGGGCATGTTGCATAGGAGTTAAGT
1201 ACCAGATGGGGAATTGCCCATGTGATGGTGAAGAGTCTCTCACATTGATTTTCTTCCTTTTCTCCTCTTCTCTCCTCCTT
1281 CTCTTCTCTCCTCTTTCTCTTCTCTTCTTTCTCTTCTCTTCTGTCTTCCTCTTCCTCTTCTCTTCCTCTCCTCTTCCTCT
1361 TTCTCTCTCTTCCTTTTTCTCTTCCTCTTTCTCTTTCTCTTTCTCTTCTCTTCTCTCTCTCTTCCTTCCTTCTTTCTTTC
1441 CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTCCCTCCCTCCCTCCCTCCTCCCTTTTTCTTTTTCTTT
1521 CTTTTTTTTTGGTTTGGCAGAGTCTTGCTCTGTTGCCCAGGCTGCAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTC
1601 CACCTCCCGGGTTCAAGCAATTCTCTTGCCTCAGCTTCTCCAGTTACTGGGACTACAGGTGCATACCACCATGCCCGGCT
1681 AATTTTTGTATTTTTAGTAGAGGCGGGGTTTTGTCATGTTGGCCAGGCTGATCTCAAACTCCTGACCTCAGGTGATCCGC
1761 CTGCCTCAGCCTTCCAAAGTGCTGAGATTACAGGCATGAGCCGCTGTACCCGGCCTGATTTTCTATGATTCTGCCTTTAA
1841 AAGACAGCACGTATACCAAGCCTTTTTCAGAAAGCTTTTCTCTTAACTCCTTCTAATGCTGAATTTTCTCTCTATTATCC
1921 TCACCCAATTTTGGCTGAGAGTTAGTGTACACAATTTAACTTCTTAGAAAAATTCCAGTGTCTATGCTTATATTGCTCAC
2001 TTGAATCATTTGAATTAGAAAGGGATCTACAAATAATAAAAGCAAAGAGTGCAGACAGATTAGGGATAGTAATTCTTAAA
2081 GTGCCATCTATCCCAGATTTCCGTTATAGACCAGCATATGTGTAATTGTGCAGTGGGAGGTAAGTAGTACCCAGGACATT
2161 GCATGTACAATACTTTGAAACAAAGTGGCAACAAAGATTTCCTGGCTCAGGTATGCACCCCAGCTGCTGGTTTAGATGAA
2241 GTGCTGAGAATATTTAGAAAAAGCGCTTTAAAAAGCATCTAGAGATTATCATGAAAATAATTGGAGACAAAGTCACTAGG
2321 CTGCTTTGTGAGAGGCAGCATACCATGGCTCTAAACCCGTTCACAAAAAACAATGTTAGAGACATTAGGAATTCAGGTTT
2401 TGAAAATCTTTTTTTCGATTTATTTGTAATTTACATACCAAAAAACCACATTAAAATAGTCCTCCCTTCAACATGGCTAT
2481 CTTTTTTCAAGTTTTATATGCATAGCTCTCTCAGCACTTGAATGGAAAAACTGTTACAGCATTTGGGAGTTGTTTTTCTT
2561 TTAGACTTTGCAGATCTTATCTCAAGGTGACTAGGAACCCAGAGCTAAGTATCTGTGAGGCAATCTCTGCGAACGCTGAA
2641 CTTACCTAGTTGGTTTCTATGAAATATGTAGAATGCACTGCAGTAGCCATTGTAAGAAGGTACTATACCGGTTTTTTGGG
2721 GCTTGTTGTTGTTGTTTGGTCTGAGAATGTACTGCCAACCCCTCTTTTATAAGAGAGAACTGATTTTGATACATATTTTA
2801 AAATATGATAGTACAGAGTTAATGGATGTTAAAATTTTATTTCTTTGTTTTGGTAAGTAGATTAAATCGAGAATCATATA
2881 ATCAGTACATTTGAGAATTATATAACCAGTATATAATAATACTGGACACAACCATTTGCCATCTTTTCCTGTTATCATCC
2961 CATAGAGTGGGTGGGGAGAATGAATAGACATAAACCTAGAATAATGATAAATGGTTTTTAAAACTCTATATTGAATACAT
3041 TCCAGCTGATAATGACTTTTCTTTTTCACCTTGGTGATATCAGCCTCAGGGTAAAAAAAAAAGTTTCATAAATCTTTTAG
3121 TTATAAACAGGAAAGTTTTATATTAGTGTGTCATTTCATTTCTAGACTGTTGATGGTGATGATGATAAAGAATTTGGAGC
3201 CAATTTTGATATATGAATGTATTGCTTTTACATGTGATGATTAAAGCTCTCCATTAGCAGTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gcUCACACUCUAGUGUGGAGGg 5'
            | ||  |  || ||||||| 
Target 5' tcACTGCAACCTC-CACCTCCc 3'
 1588 - 1608 147.00 -15.60
2 
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     |: |||:||| 
Target 5' -----------TTTCACTTCCa 3'
 1 - 11 127.00 -11.70
3 
miRNA  3' gcUCACACUCUAGUGUGGAGGg 5'
            :||||   ||::||:||:| 
Target 5' aaGGTGT-TTATTGCATCTTCa 3'
 758 - 778 127.00 -13.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30707148 2 COSMIC
COSN30506928 18 COSMIC
COSN31522058 36 COSMIC
COSN30508702 54 COSMIC
COSN30180254 58 COSMIC
COSN26423607 60 COSMIC
COSN30157158 64 COSMIC
COSN30104930 105 COSMIC
COSN20077577 169 COSMIC
COSN30127444 220 COSMIC
COSN32076348 224 COSMIC
COSN30363420 308 COSMIC
COSN31600354 382 COSMIC
COSN29939244 503 COSMIC
COSN29593813 859 COSMIC
COSN22536181 987 COSMIC
COSN22143505 1007 COSMIC
COSN7369026 1086 COSMIC
COSN1571393 1142 COSMIC
COSN24009346 1208 COSMIC
COSN4729535 1216 COSMIC
COSN16704515 1303 COSMIC
COSN20077680 1437 COSMIC
COSN9558990 1453 COSMIC
COSN16239262 1469 COSMIC
COSN23924151 1482 COSMIC
COSN32087519 1538 COSMIC
COSN24330425 1709 COSMIC
COSN9083428 1781 COSMIC
COSN16839370 1818 COSMIC
COSN5942219 1855 COSMIC
COSN1571392 1893 COSMIC
COSN1571391 1917 COSMIC
COSN22794813 2052 COSMIC
COSN20109083 2566 COSMIC
COSN22807121 2694 COSMIC
COSN20109081 2765 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1020979240 4 dbSNP
rs1045994485 6 dbSNP
rs372013391 8 dbSNP
rs1202881262 14 dbSNP
rs376688161 17 dbSNP
rs372123433 18 dbSNP
rs764323931 23 dbSNP
rs1181394671 25 dbSNP
rs1319070450 29 dbSNP
rs1242651337 31 dbSNP
rs760832367 33 dbSNP
rs1404247760 34 dbSNP
rs1289899667 35 dbSNP
rs1175935375 38 dbSNP
rs530122146 39 dbSNP
rs1470401648 40 dbSNP
rs1314733040 42 dbSNP
rs753294512 42 dbSNP
rs561096087 46 dbSNP
rs759839723 50 dbSNP
rs925784430 54 dbSNP
rs186432451 59 dbSNP
rs1281787574 71 dbSNP
rs1403383213 75 dbSNP
rs1170073838 82 dbSNP
rs1326463181 84 dbSNP
rs1351787318 88 dbSNP
rs1409977527 91 dbSNP
rs145096701 102 dbSNP
rs1343620214 104 dbSNP
rs964584361 105 dbSNP
rs1420737828 108 dbSNP
rs1235360977 111 dbSNP
rs1054648541 113 dbSNP
rs1006603747 114 dbSNP
rs1161813092 115 dbSNP
rs1018790471 116 dbSNP
rs889545559 118 dbSNP
rs3214323 123 dbSNP
rs397818975 123 dbSNP
rs768260458 123 dbSNP
rs1008835736 124 dbSNP
rs950397814 128 dbSNP
rs1182029615 132 dbSNP
rs918490638 133 dbSNP
rs1458829294 134 dbSNP
rs1025988708 144 dbSNP
rs1359705180 145 dbSNP
rs1235769626 153 dbSNP
rs1201652247 154 dbSNP
rs1378515912 155 dbSNP
rs1475326357 159 dbSNP
rs1372069940 161 dbSNP
rs1429804721 162 dbSNP
rs1301940915 163 dbSNP
rs1363207844 166 dbSNP
rs1388374024 168 dbSNP
rs941302635 171 dbSNP
rs994987852 176 dbSNP
rs1325623542 182 dbSNP
rs565225831 186 dbSNP
rs1295636188 196 dbSNP
rs1344640486 199 dbSNP
rs1038529527 203 dbSNP
rs1468859274 208 dbSNP
rs1292018174 216 dbSNP
rs1001674445 219 dbSNP
rs1487554485 237 dbSNP
rs990671597 240 dbSNP
rs183780981 242 dbSNP
rs1046365981 250 dbSNP
rs1446755960 255 dbSNP
rs1279957501 278 dbSNP
rs1241394118 280 dbSNP
rs1374958718 284 dbSNP
rs766444832 287 dbSNP
rs1330755808 290 dbSNP
rs1441809928 293 dbSNP
rs576191476 302 dbSNP
rs1322185398 314 dbSNP
rs564700843 315 dbSNP
rs542331465 324 dbSNP
rs1384211954 325 dbSNP
rs1380287865 333 dbSNP
rs573661609 334 dbSNP
rs1322241805 337 dbSNP
rs891781194 353 dbSNP
rs1053162684 358 dbSNP
rs191518200 360 dbSNP
rs1441087223 368 dbSNP
rs533775103 370 dbSNP
rs578033029 372 dbSNP
rs1020295934 381 dbSNP
rs971398519 381 dbSNP
rs1465638729 383 dbSNP
rs974813183 383 dbSNP
rs1182578146 389 dbSNP
rs763148637 392 dbSNP
rs943184347 394 dbSNP
rs1248358546 403 dbSNP
rs911734966 421 dbSNP
rs1007095167 423 dbSNP
rs1451489564 426 dbSNP
rs1450990319 430 dbSNP
rs558037652 436 dbSNP
rs987762079 438 dbSNP
rs1451731081 441 dbSNP
rs1336285399 444 dbSNP
rs950697416 447 dbSNP
rs538047204 453 dbSNP
rs1398026344 463 dbSNP
rs1050856218 469 dbSNP
rs997840456 470 dbSNP
rs896788840 491 dbSNP
rs1163379574 498 dbSNP
rs1270643693 500 dbSNP
rs1203480075 503 dbSNP
rs1330242180 503 dbSNP
rs1308861301 504 dbSNP
rs1253865033 506 dbSNP
rs749243412 507 dbSNP
rs1036720866 508 dbSNP
rs1235075874 515 dbSNP
rs569038824 530 dbSNP
rs909808026 531 dbSNP
rs1054877735 536 dbSNP
rs1173632529 539 dbSNP
rs1273177034 543 dbSNP
rs780194925 544 dbSNP
rs1303654392 559 dbSNP
rs1372690244 568 dbSNP
rs1408155514 568 dbSNP
rs74703324 570 dbSNP
rs1351702908 576 dbSNP
rs1223465040 582 dbSNP
rs1033405063 583 dbSNP
rs1320691287 599 dbSNP
rs1418319069 600 dbSNP
rs1001955827 604 dbSNP
rs1481768210 609 dbSNP
rs1206740235 612 dbSNP
rs971472118 618 dbSNP
rs71534270 629 dbSNP
rs1434986238 634 dbSNP
rs1189401264 637 dbSNP
rs988833411 643 dbSNP
rs1426930308 646 dbSNP
rs1433612712 648 dbSNP
rs186652380 657 dbSNP
rs1370233390 661 dbSNP
rs1426603888 661 dbSNP
rs1024510601 666 dbSNP
rs1014916644 670 dbSNP
rs892068454 673 dbSNP
rs1053514853 684 dbSNP
rs573042467 693 dbSNP
rs527672838 697 dbSNP
rs116668113 702 dbSNP
rs551626829 710 dbSNP
rs997914173 712 dbSNP
rs1294379414 716 dbSNP
rs896908271 726 dbSNP
rs1015641652 735 dbSNP
rs1274642506 738 dbSNP
rs1490046617 740 dbSNP
rs181099684 740 dbSNP
rs1005252469 744 dbSNP
rs1285080792 745 dbSNP
rs987361672 746 dbSNP
rs76530375 749 dbSNP
rs1388117206 752 dbSNP
rs1054990323 756 dbSNP
rs562970612 759 dbSNP
rs973335999 761 dbSNP
rs781161198 767 dbSNP
rs1280704664 770 dbSNP
rs1033353011 772 dbSNP
rs1437833622 773 dbSNP
rs76536944 781 dbSNP
rs980508130 807 dbSNP
rs1340255211 832 dbSNP
rs142803197 838 dbSNP
rs148495129 843 dbSNP
rs1358097064 845 dbSNP
rs913347799 860 dbSNP
rs1014451776 867 dbSNP
rs936038284 868 dbSNP
rs989213322 868 dbSNP
rs75966484 872 dbSNP
rs147876615 876 dbSNP
rs1245897267 886 dbSNP
rs1466099148 891 dbSNP
rs777189680 892 dbSNP
rs1190741472 900 dbSNP
rs1173324852 903 dbSNP
rs1472496529 904 dbSNP
rs1161484522 921 dbSNP
rs1416090611 929 dbSNP
rs1406390555 932 dbSNP
rs1159087762 940 dbSNP
rs1386889745 942 dbSNP
rs1413457112 947 dbSNP
rs1031900704 958 dbSNP
rs1000408968 962 dbSNP
rs561017256 964 dbSNP
rs1445391245 965 dbSNP
rs1039047217 967 dbSNP
rs1379271154 977 dbSNP
rs80345845 979 dbSNP
rs577672539 997 dbSNP
rs768911034 998 dbSNP
rs1330947845 1006 dbSNP
rs890568262 1007 dbSNP
rs1262303106 1010 dbSNP
rs1442016402 1012 dbSNP
rs1262129663 1014 dbSNP
rs1052021317 1018 dbSNP
rs1188394082 1020 dbSNP
rs747480896 1021 dbSNP
rs1473198512 1032 dbSNP
rs1484358168 1035 dbSNP
rs929126950 1039 dbSNP
rs1236005198 1055 dbSNP
rs1209479932 1056 dbSNP
rs1459139455 1058 dbSNP
rs1308195845 1064 dbSNP
rs1160305055 1066 dbSNP
rs1260115843 1067 dbSNP
rs1335796710 1070 dbSNP
rs763640495 1079 dbSNP
rs1317857943 1081 dbSNP
rs79208366 1085 dbSNP
rs1286348590 1093 dbSNP
rs1015384258 1096 dbSNP
rs1005613155 1097 dbSNP
rs1228961922 1101 dbSNP
rs764170775 1109 dbSNP
rs1342628490 1123 dbSNP
rs926274114 1124 dbSNP
rs980455529 1134 dbSNP
rs970868199 1135 dbSNP
rs1281070357 1136 dbSNP
rs1486020252 1152 dbSNP
rs1230442220 1154 dbSNP
rs917645094 1160 dbSNP
rs1473836513 1161 dbSNP
rs538110371 1171 dbSNP
rs1446871949 1175 dbSNP
rs140596160 1176 dbSNP
rs748840668 1177 dbSNP
rs1173965092 1180 dbSNP
rs1402522553 1197 dbSNP
rs1031810730 1199 dbSNP
rs906467783 1206 dbSNP
rs1046205554 1207 dbSNP
rs1410295655 1210 dbSNP
rs1322875226 1227 dbSNP
rs1463937448 1236 dbSNP
rs11612988 1237 dbSNP
rs968984301 1239 dbSNP
rs1276803004 1244 dbSNP
rs1348813684 1250 dbSNP
rs1017541709 1260 dbSNP
rs147200625 1262 dbSNP
rs1272488660 1265 dbSNP
rs890466026 1268 dbSNP
rs1484086587 1269 dbSNP
rs1425387144 1272 dbSNP
rs1051815848 1280 dbSNP
rs1267350872 1281 dbSNP
rs1053235853 1283 dbSNP
rs993995339 1284 dbSNP
rs897649863 1286 dbSNP
rs1181457063 1288 dbSNP
rs936099452 1289 dbSNP
rs1481097274 1290 dbSNP
rs1017986695 1294 dbSNP
rs575688066 1294 dbSNP
rs1429908012 1295 dbSNP
rs985463837 1296 dbSNP
rs1240044629 1299 dbSNP
rs1196839655 1301 dbSNP
rs1008318726 1306 dbSNP
rs1364202484 1309 dbSNP
rs1274402892 1316 dbSNP
rs189748062 1317 dbSNP
rs1228295320 1323 dbSNP
rs1295752738 1323 dbSNP
rs1344406004 1323 dbSNP
rs1265350875 1325 dbSNP
rs922883802 1328 dbSNP
rs1247396876 1332 dbSNP
rs58675636 1335 dbSNP
rs961591826 1336 dbSNP
rs139643894 1341 dbSNP
rs765782221 1347 dbSNP
rs1186271677 1350 dbSNP
rs1227326422 1351 dbSNP
rs1428567920 1361 dbSNP
rs1163399369 1362 dbSNP
rs983863664 1363 dbSNP
rs533950061 1364 dbSNP
rs1265101275 1365 dbSNP
rs1310804362 1371 dbSNP
rs748542647 1371 dbSNP
rs1444014399 1372 dbSNP
rs1318752299 1373 dbSNP
rs1455506579 1373 dbSNP
rs1399432136 1375 dbSNP
rs149503127 1376 dbSNP
rs908275331 1379 dbSNP
rs1338789345 1380 dbSNP
rs1247608863 1381 dbSNP
rs926553181 1384 dbSNP
rs1328870598 1387 dbSNP
rs144584425 1389 dbSNP
rs771668498 1389 dbSNP
rs1270440579 1390 dbSNP
rs1347857594 1390 dbSNP
rs386375431 1390 dbSNP
rs1163828562 1395 dbSNP
rs1180933626 1395 dbSNP
rs1253394169 1395 dbSNP
rs1425102001 1396 dbSNP
rs1188566011 1399 dbSNP
rs1001858798 1401 dbSNP
rs1471476299 1401 dbSNP
rs1382473034 1402 dbSNP
rs1176828736 1403 dbSNP
rs1439203315 1404 dbSNP
rs200307166 1407 dbSNP
rs11283159 1408 dbSNP
rs1161045536 1408 dbSNP
rs372072975 1408 dbSNP
rs753791259 1408 dbSNP
rs754300764 1408 dbSNP
rs773955924 1408 dbSNP
rs970614287 1408 dbSNP
rs1024869757 1411 dbSNP
rs1009800369 1413 dbSNP
rs1211041950 1413 dbSNP
rs1250457949 1413 dbSNP
rs1253950263 1413 dbSNP
rs1483929745 1413 dbSNP
rs10687780 1417 dbSNP
rs202176088 1417 dbSNP
rs377332040 1417 dbSNP
rs1253735751 1419 dbSNP
rs1432450366 1421 dbSNP
rs892268726 1421 dbSNP
rs1054049422 1423 dbSNP
rs200174142 1423 dbSNP
rs57062061 1423 dbSNP
rs1487799418 1424 dbSNP
rs57860326 1424 dbSNP
rs1441148732 1428 dbSNP
rs868411198 1429 dbSNP
rs57460078 1433 dbSNP
rs949055200 1436 dbSNP
rs866648804 1437 dbSNP
rs1217038245 1438 dbSNP
rs1298711152 1440 dbSNP
rs1234612515 1441 dbSNP
rs1353953922 1441 dbSNP
rs866289418 1441 dbSNP
rs59300625 1442 dbSNP
rs1481819380 1443 dbSNP
rs1233425811 1444 dbSNP
rs1287780365 1444 dbSNP
rs7137256 1445 dbSNP
rs1237287915 1447 dbSNP
rs57172968 1447 dbSNP
rs1375469188 1448 dbSNP
rs1269235597 1449 dbSNP
rs7137255 1449 dbSNP
rs1174513917 1450 dbSNP
rs1388390759 1453 dbSNP
rs1389620032 1453 dbSNP
rs185225123 1453 dbSNP
rs1173129141 1457 dbSNP
rs968928983 1457 dbSNP
rs1365417216 1458 dbSNP
rs1017784283 1461 dbSNP
rs1292728523 1465 dbSNP
rs1420142700 1469 dbSNP
rs759864572 1470 dbSNP
rs201254913 1473 dbSNP
rs776931096 1474 dbSNP
rs1362653499 1475 dbSNP
rs1157037981 1476 dbSNP
rs1219284693 1477 dbSNP
rs1230038252 1477 dbSNP
rs1273120982 1477 dbSNP
rs1319444846 1477 dbSNP
rs1321001631 1477 dbSNP
rs1468795983 1477 dbSNP
rs201143468 1477 dbSNP
rs71061135 1477 dbSNP
rs7308661 1477 dbSNP
rs202091846 1478 dbSNP
rs749183855 1478 dbSNP
rs767675997 1478 dbSNP
rs1419348366 1479 dbSNP
rs1432492313 1479 dbSNP
rs1270203153 1481 dbSNP
rs146383802 1481 dbSNP
rs147407807 1482 dbSNP
rs1201097352 1483 dbSNP
rs1431939692 1484 dbSNP
rs1292026829 1485 dbSNP
rs879370249 1485 dbSNP
rs1218220876 1486 dbSNP
rs1251388851 1486 dbSNP
rs1266036013 1486 dbSNP
rs1463681105 1486 dbSNP
rs1472547109 1486 dbSNP
rs1180590186 1490 dbSNP
rs1221210960 1490 dbSNP
rs1420713731 1491 dbSNP
rs1475832865 1495 dbSNP
rs1158833032 1499 dbSNP
rs1331163628 1502 dbSNP
rs1386909530 1502 dbSNP
rs202053396 1502 dbSNP
rs747954256 1502 dbSNP
rs1445230665 1503 dbSNP
rs775358304 1504 dbSNP
rs1355959568 1506 dbSNP
rs1388056360 1507 dbSNP
rs1227742692 1511 dbSNP
rs1489499903 1516 dbSNP
rs1352591286 1517 dbSNP
rs1207112787 1521 dbSNP
rs1285266901 1523 dbSNP
rs1284365121 1525 dbSNP
rs904617988 1526 dbSNP
rs1182104248 1531 dbSNP
rs1259732865 1531 dbSNP
rs1486245091 1531 dbSNP
rs1292645406 1532 dbSNP
rs1410193655 1537 dbSNP
rs551342241 1550 dbSNP
rs1158760090 1555 dbSNP
rs771212735 1584 dbSNP
rs1352548986 1585 dbSNP
rs1375526596 1588 dbSNP
rs1409079187 1589 dbSNP
rs1306169959 1594 dbSNP
rs1256009389 1596 dbSNP
rs1239562243 1598 dbSNP
rs761459663 1599 dbSNP
rs1344531540 1602 dbSNP
rs1232370835 1608 dbSNP
rs138547609 1609 dbSNP
rs1348760300 1611 dbSNP
rs12424076 1620 dbSNP
rs1250302109 1623 dbSNP
rs1439900963 1630 dbSNP
rs180822067 1632 dbSNP
rs1400568055 1638 dbSNP
rs1246522394 1641 dbSNP
rs1476799484 1642 dbSNP
rs1175143964 1643 dbSNP
rs748796233 1650 dbSNP
rs1167946278 1655 dbSNP
rs1041329171 1662 dbSNP
rs1166615270 1663 dbSNP
rs1398482281 1670 dbSNP
rs1391925837 1674 dbSNP
rs529442847 1676 dbSNP
rs1329144952 1690 dbSNP
rs905043188 1694 dbSNP
rs1296124726 1696 dbSNP
rs1044961955 1697 dbSNP
rs1227833331 1699 dbSNP
rs560715948 1704 dbSNP
rs560000835 1705 dbSNP
rs1021741556 1709 dbSNP
rs540295253 1718 dbSNP
rs532978726 1722 dbSNP
rs564097052 1729 dbSNP
rs926412018 1743 dbSNP
rs935079285 1750 dbSNP
rs1253290381 1751 dbSNP
rs925062795 1752 dbSNP
rs979164229 1759 dbSNP
rs1186078972 1765 dbSNP
rs1374297173 1766 dbSNP
rs1462378410 1767 dbSNP
rs754761526 1779 dbSNP
rs544210410 1782 dbSNP
rs553478324 1786 dbSNP
rs189427708 1802 dbSNP
rs1371942056 1803 dbSNP
rs555630252 1807 dbSNP
rs1009464811 1811 dbSNP
rs1328291179 1812 dbSNP
rs541659500 1825 dbSNP
rs986391029 1832 dbSNP
rs1256494235 1834 dbSNP
rs1284198128 1835 dbSNP
rs1333118812 1845 dbSNP
rs1215890019 1847 dbSNP
rs1274232055 1849 dbSNP
rs375159867 1850 dbSNP
rs955168991 1851 dbSNP
rs1263197753 1853 dbSNP
rs1030313957 1854 dbSNP
rs1415649325 1857 dbSNP
rs1032143616 1859 dbSNP
rs572949722 1861 dbSNP
rs1287398177 1863 dbSNP
rs1481964786 1869 dbSNP
rs1254922801 1881 dbSNP
rs962049890 1887 dbSNP
rs1354067955 1894 dbSNP
rs1235682868 1895 dbSNP
rs553999018 1898 dbSNP
rs1016331288 1912 dbSNP
rs1195712442 1922 dbSNP
rs1219100705 1924 dbSNP
rs1262162154 1928 dbSNP
rs1006311096 1934 dbSNP
rs1049863152 1935 dbSNP
rs1254821844 1936 dbSNP
rs904994041 1940 dbSNP
rs1217844223 1945 dbSNP
rs1410940751 1948 dbSNP
rs1417156744 1950 dbSNP
rs1023925765 1953 dbSNP
rs769333662 1953 dbSNP
rs996838142 1954 dbSNP
rs901146813 1966 dbSNP
rs1041444294 1973 dbSNP
rs1373719869 1982 dbSNP
rs534895061 1984 dbSNP
rs745826050 1987 dbSNP
rs1350219710 1990 dbSNP
rs896420077 1992 dbSNP
rs908820953 1995 dbSNP
rs1390074484 1996 dbSNP
rs567881494 1999 dbSNP
rs1232083915 2005 dbSNP
rs1277499448 2012 dbSNP
rs1349498854 2014 dbSNP
rs1211505916 2015 dbSNP
rs1332142065 2024 dbSNP
rs1251044966 2026 dbSNP
rs142272418 2043 dbSNP
rs903548823 2044 dbSNP
rs1178682905 2050 dbSNP
rs184638533 2051 dbSNP
rs1419830661 2058 dbSNP
rs747252921 2066 dbSNP
rs1436703334 2068 dbSNP
rs1170395666 2069 dbSNP
rs910717098 2072 dbSNP
rs1354412356 2075 dbSNP
rs1460947770 2081 dbSNP
rs986726981 2083 dbSNP
rs557773623 2086 dbSNP
rs1374525543 2092 dbSNP
rs923486906 2095 dbSNP
rs972359124 2102 dbSNP
rs961998300 2103 dbSNP
rs1300894012 2106 dbSNP
rs917553801 2107 dbSNP
rs139000351 2111 dbSNP
rs1189130090 2116 dbSNP
rs11062839 2127 dbSNP
rs1305625267 2128 dbSNP
rs984867492 2132 dbSNP
rs549613450 2133 dbSNP
rs1241908518 2147 dbSNP
rs1198798753 2150 dbSNP
rs1032713524 2155 dbSNP
rs143349246 2157 dbSNP
rs1256132624 2158 dbSNP
rs979241440 2164 dbSNP
rs149180300 2168 dbSNP
rs1356740425 2170 dbSNP
rs1285758535 2181 dbSNP
rs1194297879 2188 dbSNP
rs547193705 2191 dbSNP
rs1340101987 2195 dbSNP
rs1355480091 2201 dbSNP
rs1461289756 2205 dbSNP
rs1323456195 2211 dbSNP
rs1023451702 2216 dbSNP
rs1441184446 2225 dbSNP
rs1269017861 2232 dbSNP
rs1359321706 2233 dbSNP
rs1216247351 2236 dbSNP
rs1310078110 2244 dbSNP
rs1013868246 2252 dbSNP
rs547051507 2253 dbSNP
rs960585532 2257 dbSNP
rs901264783 2264 dbSNP
rs533093887 2265 dbSNP
rs145247853 2268 dbSNP
rs999402188 2275 dbSNP
rs1474506231 2279 dbSNP
rs1331311523 2284 dbSNP
rs1019603134 2285 dbSNP
rs1475181945 2301 dbSNP
rs903519662 2303 dbSNP
rs1420486389 2307 dbSNP
rs544270044 2311 dbSNP
rs1317278264 2344 dbSNP
rs887347106 2345 dbSNP
rs776306112 2348 dbSNP
rs1471601714 2351 dbSNP
rs530476298 2358 dbSNP
rs1049148837 2359 dbSNP
rs1354695054 2363 dbSNP
rs561842246 2367 dbSNP
rs1335302273 2371 dbSNP
rs118014543 2373 dbSNP
rs931576588 2379 dbSNP
rs1445335350 2387 dbSNP
rs1217984022 2389 dbSNP
rs1242810370 2397 dbSNP
rs1186494762 2408 dbSNP
rs1420462793 2409 dbSNP
rs1475759876 2416 dbSNP
rs182025699 2416 dbSNP
rs1860617 2417 dbSNP
rs1374337446 2418 dbSNP
rs1412845297 2420 dbSNP
rs755419874 2426 dbSNP
rs545586573 2428 dbSNP
rs1355821147 2435 dbSNP
rs1441276656 2445 dbSNP
rs1180940264 2446 dbSNP
rs923464432 2448 dbSNP
rs1036581319 2454 dbSNP
rs987823922 2461 dbSNP
rs1347326194 2465 dbSNP
rs940957680 2473 dbSNP
rs909211240 2480 dbSNP
rs1209311593 2483 dbSNP
rs1260289513 2488 dbSNP
rs754347469 2499 dbSNP
rs1452122677 2502 dbSNP
rs766759756 2517 dbSNP
rs984815537 2529 dbSNP
rs377153218 2531 dbSNP
rs1393952126 2537 dbSNP
rs145232231 2537 dbSNP
rs1432373470 2540 dbSNP
rs373298041 2565 dbSNP
rs138698498 2566 dbSNP
rs370120924 2566 dbSNP
rs71061134 2567 dbSNP
rs76847394 2567 dbSNP
rs925211433 2574 dbSNP
rs1409338607 2590 dbSNP
rs1242371369 2592 dbSNP
rs1337367981 2593 dbSNP
rs979316411 2598 dbSNP
rs953294542 2610 dbSNP
rs1370304722 2628 dbSNP
rs1308637642 2631 dbSNP
rs916623482 2632 dbSNP
rs1195745434 2634 dbSNP
rs975946461 2635 dbSNP
rs1333396074 2636 dbSNP
rs371309253 2649 dbSNP
rs1182044658 2652 dbSNP
rs1439988992 2652 dbSNP
rs1252044918 2653 dbSNP
rs965488640 2657 dbSNP
rs1194923125 2659 dbSNP
rs1395167857 2666 dbSNP
rs1475011573 2677 dbSNP
rs550174023 2682 dbSNP
rs1398318452 2689 dbSNP
rs774029649 2694 dbSNP
rs1410368448 2699 dbSNP
rs1405190019 2705 dbSNP
rs960784341 2709 dbSNP
rs1393968773 2710 dbSNP
rs1438987786 2710 dbSNP
rs1004201769 2711 dbSNP
rs887076957 2712 dbSNP
rs1227339420 2724 dbSNP
rs1026959128 2725 dbSNP
rs1341883825 2737 dbSNP
rs76011121 2737 dbSNP
rs1272983869 2743 dbSNP
rs1466811967 2748 dbSNP
rs571008786 2757 dbSNP
rs905461621 2762 dbSNP
rs1267429871 2763 dbSNP
rs1445954849 2768 dbSNP
rs3079895 2769 dbSNP
rs1374672852 2773 dbSNP
rs1198121325 2782 dbSNP
rs1377885267 2789 dbSNP
rs879193903 2794 dbSNP
rs764475687 2806 dbSNP
rs1478313561 2808 dbSNP
rs967961015 2811 dbSNP
rs700481 2814 dbSNP
rs769073474 2819 dbSNP
rs1381771361 2826 dbSNP
rs769446842 2827 dbSNP
rs1328670870 2831 dbSNP
rs1196455816 2843 dbSNP
rs1006483861 2845 dbSNP
rs935110102 2851 dbSNP
rs1265709583 2861 dbSNP
rs889475398 2868 dbSNP
rs745738053 2873 dbSNP
rs997950840 2875 dbSNP
rs1187204933 2889 dbSNP
rs1255132780 2893 dbSNP
rs776778536 2908 dbSNP
rs1167150471 2911 dbSNP
rs537860505 2912 dbSNP
rs1369222281 2919 dbSNP
rs532046029 2921 dbSNP
rs921883307 2924 dbSNP
rs1351782581 2932 dbSNP
rs1453364128 2943 dbSNP
rs975895626 2944 dbSNP
rs1387253131 2945 dbSNP
rs1401131670 2957 dbSNP
rs1036573391 2959 dbSNP
rs1219944196 2971 dbSNP
rs113462095 2974 dbSNP
rs940905963 2986 dbSNP
rs909495712 2987 dbSNP
rs758799 2989 dbSNP
rs948026140 3006 dbSNP
rs916588408 3008 dbSNP
rs1236447761 3021 dbSNP
rs1261956359 3023 dbSNP
rs1341467344 3028 dbSNP
rs1300448115 3029 dbSNP
rs992618696 3030 dbSNP
rs1401392787 3036 dbSNP
rs939486536 3045 dbSNP
rs1278167246 3053 dbSNP
rs189890309 3058 dbSNP
rs1486625105 3062 dbSNP
rs746830260 3069 dbSNP
rs1249566107 3074 dbSNP
rs923751336 3076 dbSNP
rs772523908 3080 dbSNP
rs1180006855 3085 dbSNP
rs1382245374 3091 dbSNP
rs1235033337 3100 dbSNP
rs201709805 3101 dbSNP
rs867762763 3101 dbSNP
rs1173111371 3103 dbSNP
rs1437127783 3103 dbSNP
rs34818389 3103 dbSNP
rs397849999 3103 dbSNP
rs967868140 3106 dbSNP
rs1026909960 3110 dbSNP
rs1373129980 3111 dbSNP
rs184904641 3125 dbSNP
rs985344033 3133 dbSNP
rs969612489 3134 dbSNP
rs953807539 3135 dbSNP
rs1029362354 3141 dbSNP
rs1376965497 3144 dbSNP
rs1023868034 3155 dbSNP
rs1480075135 3166 dbSNP
rs1349886617 3175 dbSNP
rs200958133 3176 dbSNP
rs371527388 3176 dbSNP
rs1195657714 3182 dbSNP
rs1479576732 3184 dbSNP
rs896618843 3211 dbSNP
rs1487421539 3213 dbSNP
rs1241792495 3214 dbSNP
rs536173387 3217 dbSNP
rs896928080 3225 dbSNP
rs778025946 3226 dbSNP
rs1005028618 3232 dbSNP
rs542529768 3232 dbSNP
rs887964612 3234 dbSNP
rs1435410364 3237 dbSNP
rs1177508084 3238 dbSNP
rs1049305092 3242 dbSNP
rs3168623 3251 dbSNP
rs1460833282 3254 dbSNP
rs895131432 3257 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gcucacacucuaguguGGAGGg 5'
                          ||||| 
Target 5' ----------------CCUCCc 3'
 		1 - 6
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_020367 | 3UTR | CUCACUGCAACCUCCACCUCCCGGGUUCAAGCAAUUCUCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_020367 | 3UTR | ACCUCCACCUCCCGGGUUCAAGCAAUUCUCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_020367 | 3UTR | CUCCACCUCCCGGGUUCAAGCAAUUCUCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_020367 | 3UTR | ACCUCCACCUCCCGGGUUCAAGCAAUUCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_020367 | 3UTR | CAACCUCCACCUCCCGGGUUCAAGCAAUUCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_020367 | 3UTR | AACCUCCACCUCCCGGGUUCAAGCAAUUCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000427057.2 | 3UTR | CCUCCCGGGUUCAAGCAAUUCUCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
231 hsa-miR-3689d Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059166 TXNIP thioredoxin interacting protein 2 4
MIRT080699 KIAA1468 KIAA1468 2 2
MIRT218770 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT278059 KHNYN KH and NYN domain containing 2 2
MIRT345933 EIF4A1 eukaryotic translation initiation factor 4A1 2 2
MIRT366238 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT449689 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT451149 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451266 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT451375 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451570 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451585 HIRIP3 HIRA interacting protein 3 2 2
MIRT451614 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451763 ZNF611 zinc finger protein 611 2 6
MIRT452383 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452573 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452735 PTGES3L prostaglandin E synthase 3 like 2 6
MIRT452867 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452975 CABP4 calcium binding protein 4 2 2
MIRT453215 CERS1 ceramide synthase 1 2 2
MIRT453259 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453449 GLG1 golgi glycoprotein 1 2 2
MIRT453479 PITPNM3 PITPNM family member 3 2 2
MIRT453663 CD207 CD207 molecule 2 6
MIRT453724 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453760 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT454181 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454330 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT454338 CDKL1 cyclin dependent kinase like 1 2 2
MIRT454427 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454665 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454825 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT455130 TBC1D25 TBC1 domain family member 25 2 2
MIRT455166 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455416 RXRB retinoid X receptor beta 2 2
MIRT455668 GLO1 glyoxalase I 2 2
MIRT455999 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456446 TMEM81 transmembrane protein 81 2 2
MIRT456642 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT456728 TMEM239 transmembrane protein 239 2 2
MIRT457131 ASPH aspartate beta-hydroxylase 2 2
MIRT457157 MXRA7 matrix remodeling associated 7 2 2
MIRT457358 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457458 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457619 UPK3BL uroplakin 3B like 1 2 2
MIRT457692 ZNF587 zinc finger protein 587 2 2
MIRT457727 SMOX spermine oxidase 2 2
MIRT457788 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457875 THEM6 thioesterase superfamily member 6 2 4
MIRT457909 ZNF212 zinc finger protein 212 2 2
MIRT458395 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT458496 MARVELD2 MARVEL domain containing 2 2 2
MIRT458544 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT458577 TCOF1 treacle ribosome biogenesis factor 1 2 2
MIRT458732 CES2 carboxylesterase 2 2 2
MIRT458814 ZNF843 zinc finger protein 843 2 2
MIRT458931 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459341 ZNF17 zinc finger protein 17 2 2
MIRT459365 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459572 NLGN2 neuroligin 2 2 2
MIRT460015 DTX3L deltex E3 ubiquitin ligase 3L 2 4
MIRT460144 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460653 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460798 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT461058 KCNK6 potassium two pore domain channel subfamily K member 6 2 4
MIRT461458 SLC19A3 solute carrier family 19 member 3 2 2
MIRT461572 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461927 TNFSF14 TNF superfamily member 14 2 2
MIRT461953 C3 complement C3 2 2
MIRT462278 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT462744 EFNB1 ephrin B1 2 2
MIRT463136 ZNF451 zinc finger protein 451 2 4
MIRT463566 ZBTB39 zinc finger and BTB domain containing 39 2 6
MIRT463866 WNT7B Wnt family member 7B 2 2
MIRT464326 UST uronyl 2-sulfotransferase 2 2
MIRT464796 UBE2F ubiquitin conjugating enzyme E2 F (putative) 2 2
MIRT465034 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT466207 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT467007 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467029 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT468001 SKI SKI proto-oncogene 2 2
MIRT468031 SIKE1 suppressor of IKBKE 1 2 6
MIRT468575 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT468834 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT468970 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469450 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470888 PLXND1 plexin D1 2 2
MIRT470953 PKM pyruvate kinase, muscle 2 2
MIRT471828 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472590 NACC1 nucleus accumbens associated 1 2 2
MIRT472805 MTMR12 myotubularin related protein 12 2 2
MIRT472818 MTMR10 myotubularin related protein 10 2 6
MIRT472914 MSN moesin 2 2
MIRT474558 KLHDC3 kelch domain containing 3 2 2
MIRT474716 KIF13A kinesin family member 13A 2 6
MIRT475279 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475300 IFNLR1 interferon lambda receptor 1 2 2
MIRT475759 HDLBP high density lipoprotein binding protein 2 2
MIRT475786 HDGF heparin binding growth factor 2 2
MIRT475933 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476212 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT476238 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 4
MIRT476799 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477988 DNAL1 dynein axonemal light chain 1 2 2
MIRT478317 DDN dendrin 2 2
MIRT479257 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479344 CEP97 centrosomal protein 97 2 2
MIRT479522 CDCA4 cell division cycle associated 4 2 2
MIRT479906 CCDC117 coiled-coil domain containing 117 2 6
MIRT481147 AVL9 AVL9 cell migration associated 2 6
MIRT481735 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482089 ALG8 ALG8, alpha-1,3-glucosyltransferase 2 2
MIRT482389 AEN apoptosis enhancing nuclease 2 2
MIRT483093 TFPI tissue factor pathway inhibitor 2 2
MIRT484246 ANK1 ankyrin 1 2 2
MIRT484342 EPN1 epsin 1 2 4
MIRT489141 C5orf38 chromosome 5 open reading frame 38 2 2
MIRT489163 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489547 SOX11 SRY-box 11 2 4
MIRT489780 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489799 KRT80 keratin 80 2 6
MIRT490535 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT492198 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492283 SHISA6 shisa family member 6 2 4
MIRT501059 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT501094 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503870 CBS cystathionine-beta-synthase 2 2
MIRT507981 BCL2L13 BCL2 like 13 2 4
MIRT508125 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT508205 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508385 SPTBN2 spectrin beta, non-erythrocytic 2 2 4
MIRT510308 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT510462 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512227 ATXN3 ataxin 3 2 8
MIRT512665 STEAP3 STEAP3 metalloreductase 2 2
MIRT514184 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT515053 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515138 ZNF799 zinc finger protein 799 2 4
MIRT515452 ZNF747 zinc finger protein 747 2 2
MIRT515791 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT515905 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT516129 MRPS16 mitochondrial ribosomal protein S16 2 6
MIRT516679 ZNF860 zinc finger protein 860 2 4
MIRT516750 ZNF100 zinc finger protein 100 2 2
MIRT516971 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT517491 NPAP1 nuclear pore associated protein 1 2 2
MIRT517774 PROM2 prominin 2 2 2
MIRT517938 ZNF431 zinc finger protein 431 2 4
MIRT518386 ZNF250 zinc finger protein 250 2 2
MIRT520621 TMEM41B transmembrane protein 41B 2 2
MIRT521028 SLC30A5 solute carrier family 30 member 5 2 2
MIRT521454 RAD51 RAD51 recombinase 2 2
MIRT521564 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT521581 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT522263 NKRF NFKB repressing factor 2 2
MIRT522410 MXI1 MAX interactor 1, dimerization protein 2 2
MIRT522543 MED28 mediator complex subunit 28 2 6
MIRT522915 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT523029 IGF1 insulin like growth factor 1 2 2
MIRT523854 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT524184 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524520 CDK19 cyclin dependent kinase 19 2 2
MIRT524674 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT530257 ZNF620 zinc finger protein 620 2 2
MIRT540691 BMP3 bone morphogenetic protein 3 2 2
MIRT540976 C17orf85 nuclear cap binding subunit 3 2 2
MIRT545505 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT545631 GGCX gamma-glutamyl carboxylase 2 2
MIRT547358 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT550701 MPL MPL proto-oncogene, thrombopoietin receptor 2 4
MIRT550717 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551203 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT553999 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT561081 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT563523 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT564463 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565233 TRAF6 TNF receptor associated factor 6 2 2
MIRT566618 NKAP NFKB activating protein 2 2
MIRT569527 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569639 QPCT glutaminyl-peptide cyclotransferase 2 2
MIRT570253 SSPN sarcospan 2 2
MIRT570570 OTUD7B OTU deubiquitinase 7B 2 2
MIRT570621 MTF2 metal response element binding transcription factor 2 2 2
MIRT571098 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 2
MIRT575196 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575554 Cd99 CD99 antigen 2 2
MIRT575634 Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like 2 2
MIRT608267 NOP14 NOP14 nucleolar protein 2 2
MIRT609314 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT627670 RPL28 ribosomal protein L28 2 2
MIRT631185 TSPAN14 tetraspanin 14 2 2
MIRT631964 YIPF5 Yip1 domain family member 5 2 2
MIRT632885 GINM1 glycoprotein integral membrane 1 2 2
MIRT642618 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT645609 TSPAN6 tetraspanin 6 2 2
MIRT662227 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662329 MYLK3 myosin light chain kinase 3 2 2
MIRT662725 LRRC3C leucine rich repeat containing 3C 2 2
MIRT665520 USP14 ubiquitin specific peptidase 14 2 2
MIRT666634 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT668969 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT670925 DESI1 desumoylating isopeptidase 1 2 2
MIRT673939 ZNF500 zinc finger protein 500 2 2
MIRT674675 PLCE1 phospholipase C epsilon 1 2 2
MIRT675230 MAK male germ cell associated kinase 2 2
MIRT680864 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT681047 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681105 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT683553 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684508 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684812 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT685981 CCDC77 coiled-coil domain containing 77 2 2
MIRT686709 TBC1D19 TBC1 domain family member 19 2 2
MIRT686867 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688908 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT691208 KLHL30 kelch like family member 30 2 2
MIRT692298 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT694380 MTA1 metastasis associated 1 2 2
MIRT696497 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT700686 POLR3D RNA polymerase III subunit D 2 2
MIRT701088 PAPOLG poly(A) polymerase gamma 2 2
MIRT703373 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT706189 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT706648 SMIM19 small integral membrane protein 19 2 2
MIRT709466 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT709699 DMWD DM1 locus, WD repeat containing 2 2
MIRT710693 LYRM4 LYR motif containing 4 2 2
MIRT713457 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT722409 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
MIRT725391 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT725548 DNMT3A DNA methyltransferase 3 alpha 2 2

Error report submission