miRTarBase - #MIRT453844


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pre-miRNA Information
pre-miRNA hsa-mir-3179-1   
Genomic Coordinates chr16: 14901508 - 14901591
Description Homo sapiens miR-3179-1 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-3179-2   
Genomic Coordinates chr16: 16300159 - 16300242
Description Homo sapiens miR-3179-2 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-3179-3   
Genomic Coordinates chr16: 18411894 - 18411977
Description Homo sapiens miR-3179-3 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-3179-4   
Genomic Coordinates chr16: 18494493 - 18494576
Description Homo sapiens miR-3179-4 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-3179
Sequence 52| AGAAGGGGUGAAAUUUAAACGU |73
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1351100204 1 dbSNP
rs1398613616 4 dbSNP
rs1340262765 20 dbSNP
rs1229893475 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SDK1   
Synonyms -
Description sidekick cell adhesion molecule 1
Transcript NM_152744   
Other Transcripts NM_001079653   
Expression
Putative miRNA Targets on SDK1
3'UTR of SDK1
(miRNA target sites are highlighted)		 
>SDK1|NM_152744|3'UTR
   1 GCAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTCCAATA
  81 ACTGAGCTGAAGTTTTTGTTTAAAAAGAAAAAAATCTGATAAGTGATGATTTTACCTACTTGTGGACACTAGATTTCAAT
 161 TAGGAAGGTTTTTTTAAACGGCTTTTTGTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTTCTTTTCTTTTTAAGAGA
 241 AGGTGTATTTCACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCC
 321 GTCTTCAAGACCAACTAGGAAGGGTCAAGCGGGGAGAGGGAGTGGAGGGTCAGGTGAGATCTCAGAGCTGCCCCGGCCGG
 401 CCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGCAGGACATCCTCGGCGGCTCCT
 481 GGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTGAAATGTTCTCACTT
 561 GGCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATGCTAAGGTGTGGCTCAGCCGTCACTG
 641 TCTGTGTCACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGAGA
 721 GGGAAGCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACA
 801 CGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAAATCTT
 881 TTTATCTTTTTTTAAACTATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAATTGTTCAGCT
 961 TTGTACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCC
1041 TCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTGGCTTCTGCTGGCTGCTCGCAGCAGCCACCGCTTCTCCACCACTGG
1121 CGCTGCTGCTGCCCCCTCTCCCAGTCCGAGGCCAGCTTTTAGCCTTAACAGGTTTTTTGGAAATGTTTCTTTTTTTTATT
1201 TAAAATTGTCATTGTTTGGTTTAAATTTTTCAGCTAGATGAAAAGAGTATGAACTACTTTGGAAAACTTAACAGCTCAGA
1281 GATGGCCATGCCTCCAGCCCCTCACGTCATCTTTGCAACAGACGACTGGGCTGCCATGGTCCACCCCTCAGCCCGGGTCC
1361 CGGGTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTCCCTGTAAGTGCCCCCTCACCAGC
1441 AGCAGCGTGACACACACAAGACTCAAGACCACCCTGTCAGTGCCCCCCAGTGCACGGCAAACGGGCAGGTGCCGTTCCCC
1521 CAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACATGCAGAA
1601 AGTGTGGCCCCTGCTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATTGCCTGGATTCTGTGCTGTC
1681 AGCGTTGCTGAGTATGGCCCCAGGAGACCAAGGAGAGTTTTGTATAGGCTGGAAAACCCCTTTTCAGTCTTTCCAAAATT
1761 AGAGGGTATGGCAAGTTTCCTTTTTTCTCTCCTCCCTTCCTTCCCCTCCTTCCTTTCCTTTACCCCTCCTTTCCTTCCTT
1841 CCTCCCTTCCTCTCTTCTTTCCTCCCTCCCTCCCTCCTTCCCTCCCTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCT
1921 TCTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCTTCTTCCTTTTCTCCTCCTTTTTCTGAGTGGAGGGGGAAATATTC
2001 TAAACCAAAAATCCTAGATGCTCTGCCCAAAGCCACTTCTGCATGAGAATCGCAACCCACAGTTCCCCGGATGAGACTCA
2081 CCACAGTGGACAGTGCCACCTCCTTCCCCTCGGCCCCGGAGAGGGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGGA
2161 ATTTCTTGGAAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGATGACTGCTCTCTGCAGCC
2241 ATGAGGATGTGGCTTTACATGCCAGGGAGAGTGTTGAGACGTCTTAGGTTGAGGATGAGCAGATTCGAGATATGTTTGTT
2321 GCTCTCGGGTTTTCGATACAACATCATGACACTTCTGTTTCAAGCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAAC
2401 CTTGATCTGTACGGAGCGGCCTGTCCGAGGCTACGCCGGCCTCCTGGCTGCTGCTGGACTGTGCTTAGGACAGCGCCCAT
2481 GCCTCGGAGGGACTCTGTCCCATGAGAACCACCTGTGCAAAGGAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCTCC
2561 CAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGGGAAGGAAAAGAAAATCACAGCCTAGGAA
2641 GATGGAGGTTGGATTTTAATCTCGGTTTTAAAAAGAGGACAAACAAAATGTCTCTAAGCCAGGCTAGATGGAATGTGCTC
2721 CCGCTCTCTCCTGCCGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCCCCACCCACCCCC
2801 AACGTGGCTCATTTCAGATTGCTTCGGCCCCACCCTGCAAGGATGTGGTCACGGAGTGGCCAGGAGGCTCCGTCTGAGCC
2881 ACAGGGATGGGTGTGCAGAGCTCCCTCCTCCTGGGGTGCCAGGGCAGAGATTCCAGGCAGGTGAGCCCAGAGAGAGCTGC
2961 CAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAATCGGTCCAGCCCAAGCCCCTCTCCCCAGCCTCGC
3041 CTTCAGCCTCTCTCCCAGCCTGCTTTTATAAGGCGCACTTCACTCAATGCTGTAGCCAAAAAACGAGGGGCCCCAGGGAG
3121 AGGGGACCCAGATGGCCACACACGGAACGCGCCTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCC
3201 GTGTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTAGCATGGTTTTTATTTCTTACGCAT
3281 TCTTGGCACACAGTGTAGCTATCCTCCTGACGAGCAACCCGTCTGCGTACCTAAGTGTGGCTCCCCGTGGGTCAGCGTCC
3361 TGGTAGCATGGATCCAGTCTGAAAGGTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCCT
3441 TCCCGCGTCACCTTCTGGTTTAGGGAGCCGTCAGGTCCCTAAACGTTCCCTACAACTTTTTCTGAAATTGTGCAGAAAAA
3521 CAGATCTCATTAAAAGAAAAAAAGAAACAACTTGTAGGAAGACAGAGAGGTGCTATGGGTACAATTTTTAATAAAAACAT
3601 TATTTTGTTCCTTAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugcaaauuuAAAGUGGGGAAGa 5'
                   |||| ||||||| 
Target 5' ctgcctgtcTTTC-CCCCTTCc 3'
 677 - 697 152.00 -14.00
2 
miRNA  3' ugcAAAUUUAAAGUGGGGAAGa 5'
             |||   | || :|||||| 
Target 5' cctTTTTTCTCTCCTCCCTTCc 3'
 1779 - 1800 139.00 -10.70
3 
miRNA  3' ugcAAAUUUA--AAGUGGGGAAGa 5'
             |||   |  ||| :|||||| 
Target 5' tccTTTCCTTCCTTCCTCCCTTCc 3'
 1827 - 1850 137.00 -11.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30718468 9 COSMIC
COSN28836687 13 COSMIC
COSN19036356 14 COSMIC
COSN23567867 14 COSMIC
COSN28874932 28 COSMIC
COSN16653469 32 COSMIC
COSN23100829 115 COSMIC
COSN28861955 176 COSMIC
COSN15661710 180 COSMIC
COSN17266973 322 COSMIC
COSN9989560 345 COSMIC
COSN8302128 405 COSMIC
COSN32057064 672 COSMIC
COSN2223796 714 COSMIC
COSN25744001 737 COSMIC
COSN21324591 795 COSMIC
COSN21306105 818 COSMIC
COSN19584440 1044 COSMIC
COSN20779543 1044 COSMIC
COSN32056154 1122 COSMIC
COSN23639818 1123 COSMIC
COSN20103700 1198 COSMIC
COSN4869691 1210 COSMIC
COSN16472805 1361 COSMIC
COSN19560780 1363 COSMIC
COSN6882336 1367 COSMIC
COSN28197963 1377 COSMIC
COSN8801549 1497 COSMIC
COSN26390486 1504 COSMIC
COSN20497900 1514 COSMIC
COSN4965605 1515 COSMIC
COSN6882339 1538 COSMIC
COSN6882340 1539 COSMIC
COSN27189544 1604 COSMIC
COSN26874516 1680 COSMIC
COSN8022776 1682 COSMIC
COSN24955399 1858 COSMIC
COSN20854644 1877 COSMIC
COSN8022782 2015 COSMIC
COSN28373987 2136 COSMIC
COSN23179111 2174 COSMIC
COSN2223803 2208 COSMIC
COSN21584976 2234 COSMIC
COSN8022785 2281 COSMIC
COSN27106944 2438 COSMIC
COSN19369889 2439 COSMIC
COSN20147630 2675 COSMIC
COSN8302132 2758 COSMIC
COSN14719502 2949 COSMIC
COSN14724217 2951 COSMIC
COSN1349700 2979 COSMIC
COSN27921100 3002 COSMIC
COSN4965606 3076 COSMIC
COSN30528836 3118 COSMIC
COSN30651322 3121 COSMIC
COSN24403507 3130 COSMIC
COSN22573850 3145 COSMIC
COSN30122727 3149 COSMIC
COSN30122962 3150 COSMIC
COSN14289570 3151 COSMIC
COSN14289571 3152 COSMIC
COSN30520473 3159 COSMIC
COSN14289572 3165 COSMIC
COSN30116233 3173 COSMIC
COSN30471577 3181 COSMIC
COSN31504504 3185 COSMIC
COSN30498668 3186 COSMIC
COSN30134940 3194 COSMIC
COSN6882346 3201 COSMIC
COSN30492504 3226 COSMIC
COSN32074093 3251 COSMIC
COSN24395440 3278 COSMIC
COSN31505216 3278 COSMIC
COSN14289580 3294 COSMIC
COSN30494915 3298 COSMIC
COSN519384 3307 COSMIC
COSN28807426 3312 COSMIC
COSN26994086 3322 COSMIC
COSN30101554 3327 COSMIC
COSN14289585 3328 COSMIC
COSN30138593 3330 COSMIC
COSN28705863 3347 COSMIC
COSN32060733 3348 COSMIC
COSN30486067 3350 COSMIC
COSN6882347 3351 COSMIC
COSN18722876 3358 COSMIC
COSN30500599 3365 COSMIC
COSN29961592 3391 COSMIC
COSN30510426 3405 COSMIC
COSN31508826 3415 COSMIC
COSN27410852 3416 COSMIC
COSN14289591 3425 COSMIC
COSN26994089 3434 COSMIC
COSN30169742 3435 COSMIC
COSN14289592 3439 COSMIC
COSN30488182 3445 COSMIC
COSN31482345 3456 COSMIC
COSN8022794 3471 COSMIC
COSN14289595 3486 COSMIC
COSN18732236 3492 COSMIC
COSN31602059 3497 COSMIC
COSN30533615 3549 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs755133856 3 dbSNP
rs1044093309 4 dbSNP
rs1220626217 5 dbSNP
rs1221486022 8 dbSNP
rs778983680 9 dbSNP
rs958681025 10 dbSNP
rs752731597 11 dbSNP
rs1228574718 12 dbSNP
rs1204855088 14 dbSNP
rs1446994523 19 dbSNP
rs1260284950 20 dbSNP
rs1430855439 23 dbSNP
rs1484038210 28 dbSNP
rs376835207 29 dbSNP
rs1390319284 30 dbSNP
rs1473004329 32 dbSNP
rs757222277 33 dbSNP
rs1161296908 36 dbSNP
rs994801320 37 dbSNP
rs1027530134 40 dbSNP
rs1288021446 41 dbSNP
rs886247448 45 dbSNP
rs570962273 46 dbSNP
rs781163650 47 dbSNP
rs977062755 48 dbSNP
rs1321140583 50 dbSNP
rs1330671795 52 dbSNP
rs539916528 53 dbSNP
rs546816386 54 dbSNP
rs1015616242 66 dbSNP
rs1476831862 66 dbSNP
rs1174005679 69 dbSNP
rs965514363 73 dbSNP
rs566511295 74 dbSNP
rs1040581709 79 dbSNP
rs1398742570 84 dbSNP
rs977154899 85 dbSNP
rs1364380840 98 dbSNP
rs900665615 107 dbSNP
rs1449559153 108 dbSNP
rs932114562 108 dbSNP
rs867350840 111 dbSNP
rs1049309654 115 dbSNP
rs1308142076 119 dbSNP
rs888001075 120 dbSNP
rs1004857369 124 dbSNP
rs574780695 126 dbSNP
rs954192069 127 dbSNP
rs978971217 129 dbSNP
rs1276863027 131 dbSNP
rs1003360294 136 dbSNP
rs1263201806 139 dbSNP
rs1034223403 141 dbSNP
rs958788025 144 dbSNP
rs989955780 149 dbSNP
rs185553117 152 dbSNP
rs568776145 164 dbSNP
rs1256005047 165 dbSNP
rs1364127241 169 dbSNP
rs1459032978 169 dbSNP
rs537757613 178 dbSNP
rs926211737 181 dbSNP
rs934787266 182 dbSNP
rs1350678661 188 dbSNP
rs967271606 190 dbSNP
rs1428189942 196 dbSNP
rs557886843 197 dbSNP
rs1389986856 198 dbSNP
rs376671188 209 dbSNP
rs1169739131 210 dbSNP
rs751137121 215 dbSNP
rs977116549 218 dbSNP
rs1190125317 219 dbSNP
rs916987333 219 dbSNP
rs1488560666 225 dbSNP
rs1248083218 230 dbSNP
rs1202647383 232 dbSNP
rs912206921 245 dbSNP
rs1275130201 246 dbSNP
rs1449681846 247 dbSNP
rs965196876 248 dbSNP
rs562973867 250 dbSNP
rs1368458123 252 dbSNP
rs920989922 260 dbSNP
rs1408263347 264 dbSNP
rs577802735 265 dbSNP
rs1429566942 266 dbSNP
rs1309033183 271 dbSNP
rs540307846 272 dbSNP
rs1376424292 273 dbSNP
rs930322699 278 dbSNP
rs146283959 286 dbSNP
rs756786745 287 dbSNP
rs1426712129 288 dbSNP
rs189964491 291 dbSNP
rs1004654564 299 dbSNP
rs76357785 305 dbSNP
rs1299284046 306 dbSNP
rs866119582 315 dbSNP
rs1207046075 320 dbSNP
rs1482184680 321 dbSNP
rs573804403 321 dbSNP
rs940933108 322 dbSNP
rs1210773297 327 dbSNP
rs139390239 329 dbSNP
rs907193337 330 dbSNP
rs1350105042 336 dbSNP
rs901244334 337 dbSNP
rs998245193 338 dbSNP
rs1393490834 339 dbSNP
rs1002835326 343 dbSNP
rs1056288750 344 dbSNP
rs1467031584 351 dbSNP
rs1028830118 352 dbSNP
rs894538309 353 dbSNP
rs1183595469 355 dbSNP
rs954049253 357 dbSNP
rs1421798056 359 dbSNP
rs1255249025 362 dbSNP
rs1200911566 368 dbSNP
rs1325713553 369 dbSNP
rs1265012084 372 dbSNP
rs1011440016 373 dbSNP
rs978771344 374 dbSNP
rs1241495838 375 dbSNP
rs1339036028 376 dbSNP
rs967324083 386 dbSNP
rs998769157 388 dbSNP
rs780626097 392 dbSNP
rs749802289 395 dbSNP
rs562479726 396 dbSNP
rs1218327039 399 dbSNP
rs1367616065 400 dbSNP
rs1456082004 400 dbSNP
rs1188002090 402 dbSNP
rs1464475644 406 dbSNP
rs531186789 406 dbSNP
rs917460902 412 dbSNP
rs1207071533 415 dbSNP
rs1265162162 417 dbSNP
rs1354526627 417 dbSNP
rs1245987965 418 dbSNP
rs1320161088 422 dbSNP
rs564690220 430 dbSNP
rs971981645 432 dbSNP
rs1264812623 435 dbSNP
rs1353920474 436 dbSNP
rs1211416994 438 dbSNP
rs533394322 439 dbSNP
rs1269048369 440 dbSNP
rs547047765 445 dbSNP
rs927046403 452 dbSNP
rs533314286 453 dbSNP
rs1388133778 455 dbSNP
rs1477207993 458 dbSNP
rs1191124848 459 dbSNP
rs779191335 472 dbSNP
rs542080003 474 dbSNP
rs907795033 480 dbSNP
rs940645733 482 dbSNP
rs1171676510 485 dbSNP
rs1490930376 488 dbSNP
rs1272958112 492 dbSNP
rs369085539 497 dbSNP
rs1228233509 498 dbSNP
rs1343503141 500 dbSNP
rs1272495326 504 dbSNP
rs1230421067 508 dbSNP
rs1368415171 520 dbSNP
rs1040275213 521 dbSNP
rs984952847 524 dbSNP
rs1406424493 526 dbSNP
rs909377171 533 dbSNP
rs566597698 545 dbSNP
rs940984132 552 dbSNP
rs748511162 558 dbSNP
rs1170811835 563 dbSNP
rs1477070945 566 dbSNP
rs182225745 568 dbSNP
rs1200340337 569 dbSNP
rs1399612032 574 dbSNP
rs996431962 583 dbSNP
rs1049808012 584 dbSNP
rs1438812509 587 dbSNP
rs1275695218 590 dbSNP
rs548925667 592 dbSNP
rs938693785 593 dbSNP
rs187424878 596 dbSNP
rs1224909649 601 dbSNP
rs191004107 602 dbSNP
rs1311832783 607 dbSNP
rs1338620793 613 dbSNP
rs755954355 622 dbSNP
rs1000179955 635 dbSNP
rs1246975500 639 dbSNP
rs1011663044 647 dbSNP
rs1042949801 650 dbSNP
rs1033052695 662 dbSNP
rs772279708 663 dbSNP
rs1168452393 678 dbSNP
rs1481497236 680 dbSNP
rs1410012648 682 dbSNP
rs1352767622 685 dbSNP
rs998667034 689 dbSNP
rs1019964194 692 dbSNP
rs965300448 693 dbSNP
rs1234993786 697 dbSNP
rs1185986166 699 dbSNP
rs1442366102 704 dbSNP
rs1010460934 711 dbSNP
rs144123466 712 dbSNP
rs571399233 713 dbSNP
rs771137823 714 dbSNP
rs1422572009 727 dbSNP
rs533721123 730 dbSNP
rs951837176 734 dbSNP
rs984412718 738 dbSNP
rs1375188464 748 dbSNP
rs1282223297 752 dbSNP
rs1447109554 759 dbSNP
rs907513791 761 dbSNP
rs776844231 762 dbSNP
rs753118046 766 dbSNP
rs1015256155 767 dbSNP
rs75528200 770 dbSNP
rs139548387 771 dbSNP
rs928906166 778 dbSNP
rs1302319615 783 dbSNP
rs1244280144 787 dbSNP
rs765200053 793 dbSNP
rs1397681660 794 dbSNP
rs542749631 795 dbSNP
rs371495069 796 dbSNP
rs1318355708 798 dbSNP
rs556194422 802 dbSNP
rs1227517256 808 dbSNP
rs73671409 810 dbSNP
rs1054553866 811 dbSNP
rs1237705772 815 dbSNP
rs947330899 816 dbSNP
rs1044701 819 dbSNP
rs903240856 822 dbSNP
rs1431670949 835 dbSNP
rs1347179542 838 dbSNP
rs1209063031 839 dbSNP
rs150010824 840 dbSNP
rs1386295857 842 dbSNP
rs1253721671 844 dbSNP
rs1024545196 849 dbSNP
rs972078052 853 dbSNP
rs1388937080 854 dbSNP
rs1186584911 864 dbSNP
rs1206085055 868 dbSNP
rs1486593655 873 dbSNP
rs1244597828 874 dbSNP
rs763751467 879 dbSNP
rs1244302911 885 dbSNP
rs1490440724 886 dbSNP
rs1293699203 887 dbSNP
rs1226009264 896 dbSNP
rs1341376374 897 dbSNP
rs1215227337 898 dbSNP
rs1040864542 904 dbSNP
rs751230211 905 dbSNP
rs533698938 909 dbSNP
rs372707911 912 dbSNP
rs1404605128 914 dbSNP
rs756839877 919 dbSNP
rs878982216 920 dbSNP
rs1175670512 922 dbSNP
rs370660022 927 dbSNP
rs1034964731 930 dbSNP
rs767069436 935 dbSNP
rs1337248523 941 dbSNP
rs1429740507 941 dbSNP
rs1422482632 946 dbSNP
rs888113931 952 dbSNP
rs1480567205 959 dbSNP
rs952220942 960 dbSNP
rs1202757275 967 dbSNP
rs1015308596 972 dbSNP
rs961128390 976 dbSNP
rs1206591863 977 dbSNP
rs984465047 983 dbSNP
rs1309294936 989 dbSNP
rs972672701 991 dbSNP
rs1223058920 997 dbSNP
rs749909910 1000 dbSNP
rs961661634 1007 dbSNP
rs1218249454 1010 dbSNP
rs1285491031 1012 dbSNP
rs746085081 1013 dbSNP
rs1408361139 1016 dbSNP
rs1373104757 1018 dbSNP
rs976183579 1020 dbSNP
rs1035857166 1027 dbSNP
rs923195514 1033 dbSNP
rs1175094521 1034 dbSNP
rs540437158 1038 dbSNP
rs1430960687 1043 dbSNP
rs560322167 1044 dbSNP
rs1472125814 1046 dbSNP
rs184047334 1048 dbSNP
rs1197356027 1053 dbSNP
rs936493850 1054 dbSNP
rs1178833926 1055 dbSNP
rs377289216 1057 dbSNP
rs891912118 1058 dbSNP
rs1234928297 1059 dbSNP
rs916131577 1069 dbSNP
rs549112035 1073 dbSNP
rs568896685 1074 dbSNP
rs564011529 1088 dbSNP
rs924712268 1091 dbSNP
rs1393577014 1093 dbSNP
rs907443831 1094 dbSNP
rs1377617870 1102 dbSNP
rs1336717152 1103 dbSNP
rs1481421168 1105 dbSNP
rs531636420 1105 dbSNP
rs934748975 1106 dbSNP
rs188976158 1113 dbSNP
rs901003279 1121 dbSNP
rs1364105753 1122 dbSNP
rs1034608877 1132 dbSNP
rs1161008658 1132 dbSNP
rs1423082555 1133 dbSNP
rs887922616 1135 dbSNP
rs1006359613 1136 dbSNP
rs1014615424 1141 dbSNP
rs932434616 1145 dbSNP
rs961793729 1148 dbSNP
rs975772452 1149 dbSNP
rs1030447678 1151 dbSNP
rs1463982591 1157 dbSNP
rs953084431 1161 dbSNP
rs986414969 1172 dbSNP
rs925211223 1173 dbSNP
rs374176248 1178 dbSNP
rs1005191700 1184 dbSNP
rs34165065 1185 dbSNP
rs754678052 1186 dbSNP
rs913314392 1186 dbSNP
rs1384309231 1190 dbSNP
rs35404818 1190 dbSNP
rs398003467 1190 dbSNP
rs534104034 1192 dbSNP
rs1045822829 1199 dbSNP
rs907159047 1202 dbSNP
rs748555035 1205 dbSNP
rs1013060905 1210 dbSNP
rs547571092 1212 dbSNP
rs968941632 1213 dbSNP
rs1446376386 1215 dbSNP
rs567516930 1216 dbSNP
rs978785993 1226 dbSNP
rs536341748 1229 dbSNP
rs888058664 1232 dbSNP
rs956357791 1234 dbSNP
rs548884616 1238 dbSNP
rs1207167158 1239 dbSNP
rs1015086048 1241 dbSNP
rs1291540184 1250 dbSNP
rs932512956 1256 dbSNP
rs145232227 1261 dbSNP
rs528898373 1271 dbSNP
rs997643809 1272 dbSNP
rs1296137893 1276 dbSNP
rs1245412245 1282 dbSNP
rs747300619 1283 dbSNP
rs1226024771 1284 dbSNP
rs1326557895 1289 dbSNP
rs1297217095 1295 dbSNP
rs953139377 1300 dbSNP
rs909825330 1301 dbSNP
rs1303550169 1303 dbSNP
rs1007241518 1306 dbSNP
rs547685410 1307 dbSNP
rs941275229 1317 dbSNP
rs1032240466 1323 dbSNP
rs566886120 1324 dbSNP
rs538227367 1325 dbSNP
rs896824031 1329 dbSNP
rs1003587307 1330 dbSNP
rs1479579726 1332 dbSNP
rs1056230613 1334 dbSNP
rs1223664995 1337 dbSNP
rs1490955645 1346 dbSNP
rs1162431362 1347 dbSNP
rs1367259405 1355 dbSNP
rs1424880443 1356 dbSNP
rs1271480357 1360 dbSNP
rs913703042 1361 dbSNP
rs144603189 1362 dbSNP
rs376837314 1363 dbSNP
rs1230543027 1364 dbSNP
rs539626754 1365 dbSNP
rs1013116236 1367 dbSNP
rs1406509698 1370 dbSNP
rs928748564 1377 dbSNP
rs147964409 1378 dbSNP
rs374214333 1393 dbSNP
rs909465620 1395 dbSNP
rs942320686 1398 dbSNP
rs1032301252 1402 dbSNP
rs1468348194 1402 dbSNP
rs141851338 1403 dbSNP
rs1481597123 1407 dbSNP
rs1231562097 1410 dbSNP
rs1181638723 1412 dbSNP
rs977127152 1413 dbSNP
rs922726686 1414 dbSNP
rs897952012 1418 dbSNP
rs1201227363 1419 dbSNP
rs1322267398 1420 dbSNP
rs954109064 1422 dbSNP
rs997714577 1424 dbSNP
rs1278742509 1428 dbSNP
rs776901490 1430 dbSNP
rs1051924096 1431 dbSNP
rs909717439 1433 dbSNP
rs941158912 1437 dbSNP
rs888892894 1438 dbSNP
rs772792585 1442 dbSNP
rs1032043139 1447 dbSNP
rs560310091 1448 dbSNP
rs918473631 1450 dbSNP
rs1406168891 1458 dbSNP
rs573931062 1465 dbSNP
rs1009447364 1466 dbSNP
rs1056517828 1467 dbSNP
rs59729650 1469 dbSNP
rs894925818 1473 dbSNP
rs1182341250 1474 dbSNP
rs1460444646 1475 dbSNP
rs1020901972 1481 dbSNP
rs562615192 1483 dbSNP
rs970937178 1484 dbSNP
rs865806256 1485 dbSNP
rs1044621714 1489 dbSNP
rs531850132 1496 dbSNP
rs904693130 1498 dbSNP
rs762428800 1503 dbSNP
rs1358111318 1504 dbSNP
rs958859080 1512 dbSNP
rs745912088 1513 dbSNP
rs769723222 1515 dbSNP
rs942040848 1518 dbSNP
rs878985063 1519 dbSNP
rs1036552714 1520 dbSNP
rs1401627492 1523 dbSNP
rs998220390 1530 dbSNP
rs1162177237 1546 dbSNP
rs919532204 1550 dbSNP
rs551447625 1551 dbSNP
rs933473808 1557 dbSNP
rs1484643346 1560 dbSNP
rs1241122897 1562 dbSNP
rs1051975185 1564 dbSNP
rs888853806 1567 dbSNP
rs1207162743 1568 dbSNP
rs565287040 1569 dbSNP
rs1289331496 1572 dbSNP
rs1221581196 1574 dbSNP
rs117412862 1577 dbSNP
rs1230071219 1582 dbSNP
rs1360015264 1608 dbSNP
rs1269776705 1609 dbSNP
rs1431787771 1610 dbSNP
rs972956708 1614 dbSNP
rs918537024 1619 dbSNP
rs1166057884 1620 dbSNP
rs1366723313 1620 dbSNP
rs1426173999 1632 dbSNP
rs1418211147 1634 dbSNP
rs547758031 1637 dbSNP
rs1476199101 1645 dbSNP
rs1266404947 1647 dbSNP
rs1198419404 1654 dbSNP
rs991872007 1667 dbSNP
rs1293829665 1672 dbSNP
rs868803039 1676 dbSNP
rs866174592 1677 dbSNP
rs77952272 1679 dbSNP
rs947661459 1683 dbSNP
rs1021277168 1685 dbSNP
rs1404682361 1685 dbSNP
rs906474907 1688 dbSNP
rs1295764605 1693 dbSNP
rs536476403 1695 dbSNP
rs1353358286 1701 dbSNP
rs1423793493 1703 dbSNP
rs1033552745 1709 dbSNP
rs959206984 1714 dbSNP
rs991495893 1716 dbSNP
rs1408953655 1718 dbSNP
rs1454049443 1721 dbSNP
rs768505308 1725 dbSNP
rs892075042 1729 dbSNP
rs998843038 1731 dbSNP
rs1334409170 1733 dbSNP
rs1489418363 1734 dbSNP
rs1241394124 1738 dbSNP
rs1029876037 1740 dbSNP
rs1016323698 1748 dbSNP
rs1006817405 1763 dbSNP
rs963320721 1764 dbSNP
rs972069229 1766 dbSNP
rs1324639490 1768 dbSNP
rs1303884001 1771 dbSNP
rs962752149 1772 dbSNP
rs972623171 1779 dbSNP
rs1025892768 1781 dbSNP
rs1448323202 1784 dbSNP
rs774130696 1787 dbSNP
rs550020444 1792 dbSNP
rs992486016 1798 dbSNP
rs1197977435 1801 dbSNP
rs1248120662 1803 dbSNP
rs570851947 1805 dbSNP
rs369769645 1810 dbSNP
rs767122401 1812 dbSNP
rs1459104383 1814 dbSNP
rs1182029632 1821 dbSNP
rs538734945 1823 dbSNP
rs979068078 1824 dbSNP
rs1461933441 1825 dbSNP
rs988135022 1826 dbSNP
rs1476719942 1829 dbSNP
rs1316750736 1831 dbSNP
rs1308277494 1845 dbSNP
rs1242990510 1851 dbSNP
rs1379855572 1853 dbSNP
rs1335510329 1854 dbSNP
rs1452803777 1857 dbSNP
rs1403895575 1859 dbSNP
rs1177967959 1861 dbSNP
rs1286795222 1861 dbSNP
rs1452752972 1861 dbSNP
rs925047505 1861 dbSNP
rs935061904 1863 dbSNP
rs1291968400 1867 dbSNP
rs910680477 1867 dbSNP
rs943535500 1869 dbSNP
rs1424514286 1871 dbSNP
rs1470578351 1871 dbSNP
rs1258505017 1873 dbSNP
rs1053503061 1875 dbSNP
rs893589197 1879 dbSNP
rs1219353147 1885 dbSNP
rs192254914 1886 dbSNP
rs934141839 1890 dbSNP
rs1394735029 1891 dbSNP
rs1393507517 1894 dbSNP
rs13230455 1895 dbSNP
rs13247423 1902 dbSNP
rs1051796882 1903 dbSNP
rs760251319 1904 dbSNP
rs906434620 1905 dbSNP
rs1403408663 1911 dbSNP
rs1381330600 1918 dbSNP
rs765748824 1919 dbSNP
rs151091785 1923 dbSNP
rs1422591835 1928 dbSNP
rs1364857888 1932 dbSNP
rs1324424427 1935 dbSNP
rs1487685054 1935 dbSNP
rs1034017158 1940 dbSNP
rs534212466 1941 dbSNP
rs1006871461 1945 dbSNP
rs554071760 1946 dbSNP
rs1249575150 1947 dbSNP
rs1038322891 1948 dbSNP
rs894960086 1950 dbSNP
rs1428154042 1952 dbSNP
rs1005356628 1953 dbSNP
rs1264240523 1959 dbSNP
rs1196293075 1962 dbSNP
rs1341127177 1963 dbSNP
rs1489972473 1967 dbSNP
rs1196171001 1971 dbSNP
rs1266477154 1976 dbSNP
rs1016292143 1982 dbSNP
rs963456647 1995 dbSNP
rs1201199538 1998 dbSNP
rs972463579 1999 dbSNP
rs1326657043 2000 dbSNP
rs1026277963 2006 dbSNP
rs759244101 2007 dbSNP
rs1279746382 2009 dbSNP
rs1402850463 2019 dbSNP
rs1344661946 2020 dbSNP
rs1303647497 2021 dbSNP
rs1388453587 2023 dbSNP
rs1392898009 2024 dbSNP
rs59185934 2026 dbSNP
rs1461604744 2029 dbSNP
rs987715701 2034 dbSNP
rs1173151078 2044 dbSNP
rs910807447 2046 dbSNP
rs1479630575 2049 dbSNP
rs556389007 2053 dbSNP
rs1464030810 2057 dbSNP
rs989670225 2060 dbSNP
rs542778702 2068 dbSNP
rs1023574973 2069 dbSNP
rs563108076 2070 dbSNP
rs1318065396 2076 dbSNP
rs1259536564 2078 dbSNP
rs576415011 2080 dbSNP
rs6954717 2081 dbSNP
rs924931635 2084 dbSNP
rs906160451 2085 dbSNP
rs1305209952 2086 dbSNP
rs1438414870 2090 dbSNP
rs1333901459 2091 dbSNP
rs1328146610 2095 dbSNP
rs956361528 2096 dbSNP
rs988305074 2097 dbSNP
rs939034679 2099 dbSNP
rs1399480427 2100 dbSNP
rs1468432416 2103 dbSNP
rs1293276830 2106 dbSNP
rs78787571 2113 dbSNP
rs1479234493 2115 dbSNP
rs141017875 2118 dbSNP
rs1051189388 2119 dbSNP
rs527716740 2120 dbSNP
rs911505000 2124 dbSNP
rs781597501 2125 dbSNP
rs1264619416 2127 dbSNP
rs112011450 2128 dbSNP
rs1038375618 2129 dbSNP
rs1224206378 2131 dbSNP
rs1005325753 2132 dbSNP
rs111460358 2136 dbSNP
rs375992822 2137 dbSNP
rs1240822433 2141 dbSNP
rs1377652191 2143 dbSNP
rs1263307671 2150 dbSNP
rs1430779626 2154 dbSNP
rs1450629828 2155 dbSNP
rs1405587173 2157 dbSNP
rs993556165 2158 dbSNP
rs763876482 2159 dbSNP
rs1194581206 2160 dbSNP
rs1335165784 2177 dbSNP
rs1026832628 2179 dbSNP
rs954703558 2180 dbSNP
rs1158430205 2181 dbSNP
rs1440862965 2186 dbSNP
rs896542847 2192 dbSNP
rs1181208729 2193 dbSNP
rs1443522783 2195 dbSNP
rs554012305 2198 dbSNP
rs749317254 2202 dbSNP
rs1017851752 2203 dbSNP
rs1283296988 2204 dbSNP
rs1023460349 2206 dbSNP
rs1366440102 2210 dbSNP
rs964997551 2215 dbSNP
rs1378567608 2217 dbSNP
rs530030919 2229 dbSNP
rs540859605 2231 dbSNP
rs867856690 2232 dbSNP
rs569835084 2234 dbSNP
rs532105217 2239 dbSNP
rs552289474 2242 dbSNP
rs565517622 2243 dbSNP
rs200748844 2246 dbSNP
rs1311965167 2248 dbSNP
rs573384076 2249 dbSNP
rs1380222362 2252 dbSNP
rs1423400917 2260 dbSNP
rs1247917966 2265 dbSNP
rs1413922128 2274 dbSNP
rs1183169364 2275 dbSNP
rs1315542089 2278 dbSNP
rs1241214393 2281 dbSNP
rs1032228747 2285 dbSNP
rs1489178620 2288 dbSNP
rs1289448613 2297 dbSNP
rs138436809 2308 dbSNP
rs1213262552 2311 dbSNP
rs1261948948 2314 dbSNP
rs1230157267 2319 dbSNP
rs977846111 2320 dbSNP
rs1485920720 2325 dbSNP
rs141563144 2327 dbSNP
rs768453152 2328 dbSNP
rs774167835 2329 dbSNP
rs1460212633 2335 dbSNP
rs868369577 2336 dbSNP
rs1386317389 2338 dbSNP
rs1436390974 2340 dbSNP
rs145243120 2341 dbSNP
rs1038251336 2344 dbSNP
rs1407755802 2347 dbSNP
rs1157230246 2353 dbSNP
rs986965072 2356 dbSNP
rs1365571226 2368 dbSNP
rs911389675 2369 dbSNP
rs942831607 2376 dbSNP
rs572441268 2377 dbSNP
rs920158968 2378 dbSNP
rs1248454506 2385 dbSNP
rs1454578377 2386 dbSNP
rs1436200611 2387 dbSNP
rs1257610150 2388 dbSNP
rs1320362324 2397 dbSNP
rs576619232 2397 dbSNP
rs1337113371 2400 dbSNP
rs184406629 2401 dbSNP
rs559035341 2404 dbSNP
rs929982785 2405 dbSNP
rs1375938198 2412 dbSNP
rs994418170 2413 dbSNP
rs1439337609 2414 dbSNP
rs1308734258 2415 dbSNP
rs572590510 2418 dbSNP
rs890558688 2419 dbSNP
rs541400092 2421 dbSNP
rs949439283 2423 dbSNP
rs1427151374 2424 dbSNP
rs561275095 2427 dbSNP
rs760178732 2428 dbSNP
rs905036298 2435 dbSNP
rs529967418 2436 dbSNP
rs1459245089 2437 dbSNP
rs1011125256 2438 dbSNP
rs1244080243 2439 dbSNP
rs1022572921 2441 dbSNP
rs543745860 2442 dbSNP
rs966877085 2443 dbSNP
rs978695456 2452 dbSNP
rs1448438657 2455 dbSNP
rs927719240 2457 dbSNP
rs960779257 2458 dbSNP
rs990535727 2468 dbSNP
rs916205559 2471 dbSNP
rs1403405960 2472 dbSNP
rs563328488 2473 dbSNP
rs532371372 2475 dbSNP
rs985847511 2476 dbSNP
rs1470902684 2479 dbSNP
rs552109785 2480 dbSNP
rs546060065 2486 dbSNP
rs187207536 2487 dbSNP
rs750692051 2491 dbSNP
rs1353663282 2496 dbSNP
rs920193454 2498 dbSNP
rs930230041 2500 dbSNP
rs983221879 2505 dbSNP
rs1258151902 2513 dbSNP
rs1214165921 2515 dbSNP
rs1353616321 2523 dbSNP
rs1287416631 2527 dbSNP
rs929806467 2534 dbSNP
rs1379968610 2536 dbSNP
rs1311516970 2559 dbSNP
rs1396255362 2563 dbSNP
rs1051408259 2567 dbSNP
rs1380998001 2569 dbSNP
rs191627569 2572 dbSNP
rs1361051550 2573 dbSNP
rs1373587801 2574 dbSNP
rs142673632 2580 dbSNP
rs1366803448 2582 dbSNP
rs1039140540 2585 dbSNP
rs1280767918 2588 dbSNP
rs144095438 2591 dbSNP
rs1424606009 2594 dbSNP
rs184873630 2595 dbSNP
rs1191921430 2602 dbSNP
rs1264464338 2603 dbSNP
rs1219470686 2607 dbSNP
rs1264312238 2612 dbSNP
rs1307222878 2614 dbSNP
rs936513383 2632 dbSNP
rs1253521223 2635 dbSNP
rs1053613989 2638 dbSNP
rs148670479 2639 dbSNP
rs1022543627 2643 dbSNP
rs556852695 2644 dbSNP
rs3801065 2649 dbSNP
rs1340931666 2651 dbSNP
rs1266800478 2653 dbSNP
rs1035633867 2662 dbSNP
rs574038304 2664 dbSNP
rs990504622 2666 dbSNP
rs1199975086 2670 dbSNP
rs1458515165 2670 dbSNP
rs1418725583 2675 dbSNP
rs1023352878 2678 dbSNP
rs962339065 2682 dbSNP
rs1424788460 2685 dbSNP
rs1408191984 2691 dbSNP
rs973732519 2696 dbSNP
rs1267347367 2705 dbSNP
rs1209880457 2708 dbSNP
rs1249207917 2722 dbSNP
rs1489203278 2722 dbSNP
rs539192381 2723 dbSNP
rs1279843930 2724 dbSNP
rs576047250 2724 dbSNP
rs1423576868 2726 dbSNP
rs1221534814 2727 dbSNP
rs1330421809 2728 dbSNP
rs929917202 2731 dbSNP
rs374003452 2733 dbSNP
rs141238849 2736 dbSNP
rs10237400 2737 dbSNP
rs150649766 2740 dbSNP
rs949385415 2747 dbSNP
rs189334212 2751 dbSNP
rs3823688 2752 dbSNP
rs936733903 2755 dbSNP
rs3823687 2757 dbSNP
rs577078624 2758 dbSNP
rs913738923 2764 dbSNP
rs945171304 2766 dbSNP
rs1259640753 2774 dbSNP
rs1043790428 2777 dbSNP
rs1490843923 2782 dbSNP
rs890346881 2784 dbSNP
rs1275333840 2787 dbSNP
rs1235329783 2789 dbSNP
rs545943280 2791 dbSNP
rs902759537 2795 dbSNP
rs559126164 2800 dbSNP
rs1038660872 2803 dbSNP
rs1000143848 2804 dbSNP
rs1413072988 2813 dbSNP
rs1401980974 2817 dbSNP
rs1474365392 2818 dbSNP
rs898952378 2820 dbSNP
rs114363675 2822 dbSNP
rs543465650 2826 dbSNP
rs1012396638 2827 dbSNP
rs1023321688 2831 dbSNP
rs547924363 2834 dbSNP
rs1441563083 2835 dbSNP
rs561335279 2838 dbSNP
rs117619548 2839 dbSNP
rs1351407522 2844 dbSNP
rs1316981109 2847 dbSNP
rs550324503 2853 dbSNP
rs555559519 2854 dbSNP
rs538971451 2855 dbSNP
rs951081866 2863 dbSNP
rs71527480 2865 dbSNP
rs140793242 2871 dbSNP
rs566321981 2872 dbSNP
rs942499148 2873 dbSNP
rs975269435 2875 dbSNP
rs1312635420 2881 dbSNP
rs573865228 2882 dbSNP
rs10237536 2885 dbSNP
rs1229138467 2892 dbSNP
rs946820147 2893 dbSNP
rs1472251396 2894 dbSNP
rs574863427 2895 dbSNP
rs923912050 2897 dbSNP
rs945245822 2904 dbSNP
rs1445370722 2906 dbSNP
rs537417872 2907 dbSNP
rs1217285537 2908 dbSNP
rs1354416065 2917 dbSNP
rs1052013306 2923 dbSNP
rs180828523 2936 dbSNP
rs562912609 2938 dbSNP
rs544504107 2941 dbSNP
rs201052629 2948 dbSNP
rs386709559 2948 dbSNP
rs577022514 2948 dbSNP
rs1562541 2949 dbSNP
rs113223220 2950 dbSNP
rs1562540 2951 dbSNP
rs1401155707 2955 dbSNP
rs896764163 2956 dbSNP
rs1012365474 2960 dbSNP
rs1363067350 2965 dbSNP
rs572737970 2966 dbSNP
rs1321004020 2969 dbSNP
rs898837567 2970 dbSNP
rs994876546 2971 dbSNP
rs1444842587 2974 dbSNP
rs541504785 2977 dbSNP
rs886171567 2978 dbSNP
rs1489229083 2982 dbSNP
rs898675637 2985 dbSNP
rs748017123 2986 dbSNP
rs1451135201 2989 dbSNP
rs771858133 2990 dbSNP
rs1390000401 2991 dbSNP
rs1235377769 2995 dbSNP
rs1025411305 2998 dbSNP
rs1277944566 2999 dbSNP
rs1004414682 3001 dbSNP
rs1025140476 3002 dbSNP
rs1292338053 3003 dbSNP
rs561414833 3007 dbSNP
rs1349994243 3008 dbSNP
rs3801062 3009 dbSNP
rs1448964681 3010 dbSNP
rs563931675 3015 dbSNP
rs746296063 3016 dbSNP
rs1478708928 3019 dbSNP
rs1422920467 3020 dbSNP
rs1190583603 3021 dbSNP
rs770466314 3024 dbSNP
rs1247382390 3026 dbSNP
rs776246987 3032 dbSNP
rs963997722 3034 dbSNP
rs1225532079 3039 dbSNP
rs1975585 3040 dbSNP
rs1309656554 3042 dbSNP
rs914376581 3045 dbSNP
rs987353575 3046 dbSNP
rs1201746757 3048 dbSNP
rs1244695871 3049 dbSNP
rs968556471 3051 dbSNP
rs1443987630 3055 dbSNP
rs1375666363 3057 dbSNP
rs1562539 3058 dbSNP
rs974638177 3060 dbSNP
rs1463297922 3062 dbSNP
rs1357223154 3063 dbSNP
rs924077013 3064 dbSNP
rs935310068 3069 dbSNP
rs1056506702 3071 dbSNP
rs147873423 3075 dbSNP
rs920482120 3076 dbSNP
rs1437953845 3081 dbSNP
rs376052869 3088 dbSNP
rs1179529058 3092 dbSNP
rs1481785271 3093 dbSNP
rs1562538 3094 dbSNP
rs1209926968 3098 dbSNP
rs1428031172 3098 dbSNP
rs1469714705 3099 dbSNP
rs568525298 3102 dbSNP
rs537151801 3105 dbSNP
rs59676101 3106 dbSNP
rs886224751 3107 dbSNP
rs949837203 3108 dbSNP
rs1392789290 3109 dbSNP
rs1376594403 3111 dbSNP
rs35546130 3116 dbSNP
rs1045471871 3122 dbSNP
rs1448530579 3123 dbSNP
rs1377169519 3124 dbSNP
rs1156796461 3125 dbSNP
rs995703140 3128 dbSNP
rs373542973 3130 dbSNP
rs539702263 3139 dbSNP
rs375922370 3141 dbSNP
rs1019312063 3144 dbSNP
rs762347764 3145 dbSNP
rs572820239 3149 dbSNP
rs530619633 3150 dbSNP
rs541592651 3151 dbSNP
rs1352267493 3152 dbSNP
rs968524105 3158 dbSNP
rs1194998480 3159 dbSNP
rs866819664 3161 dbSNP
rs1018949310 3163 dbSNP
rs1439158922 3165 dbSNP
rs117603586 3166 dbSNP
rs1357165416 3171 dbSNP
rs1296194187 3174 dbSNP
rs1399336067 3175 dbSNP
rs12631 3179 dbSNP
rs974530462 3181 dbSNP
rs1455457392 3182 dbSNP
rs920551562 3184 dbSNP
rs1164389615 3187 dbSNP
rs1475702310 3188 dbSNP
rs10227734 3190 dbSNP
rs373409660 3194 dbSNP
rs907537475 3195 dbSNP
rs10268227 3200 dbSNP
rs1467065606 3201 dbSNP
rs1264450809 3202 dbSNP
rs10227750 3205 dbSNP
rs1394846081 3210 dbSNP
rs1336601356 3211 dbSNP
rs778897732 3214 dbSNP
rs139825086 3223 dbSNP
rs1341029822 3225 dbSNP
rs369914567 3232 dbSNP
rs374155842 3234 dbSNP
rs1388676686 3240 dbSNP
rs745712322 3247 dbSNP
rs372114739 3254 dbSNP
rs748150150 3255 dbSNP
rs1168948857 3257 dbSNP
rs1047268521 3260 dbSNP
rs1322500390 3268 dbSNP
rs528804196 3269 dbSNP
rs185661557 3277 dbSNP
rs761378574 3278 dbSNP
rs772505422 3280 dbSNP
rs777592784 3283 dbSNP
rs562800320 3287 dbSNP
rs1181171414 3288 dbSNP
rs1415537916 3289 dbSNP
rs1424081715 3290 dbSNP
rs1157878786 3291 dbSNP
rs754151443 3292 dbSNP
rs1463022473 3293 dbSNP
rs902518770 3295 dbSNP
rs759781074 3296 dbSNP
rs899468604 3300 dbSNP
rs765407709 3302 dbSNP
rs752821351 3303 dbSNP
rs531023498 3305 dbSNP
rs746750629 3307 dbSNP
rs750383539 3309 dbSNP
rs117105678 3312 dbSNP
rs766646375 3313 dbSNP
rs749052375 3316 dbSNP
rs189213134 3321 dbSNP
rs778688730 3322 dbSNP
rs368466978 3327 dbSNP
rs371828378 3328 dbSNP
rs1206099197 3333 dbSNP
rs907757880 3334 dbSNP
rs1298530831 3337 dbSNP
rs1238743431 3338 dbSNP
rs771298542 3341 dbSNP
rs558177463 3342 dbSNP
rs777016774 3344 dbSNP
rs11981816 3345 dbSNP
rs1182586697 3346 dbSNP
rs8514 3347 dbSNP
rs571722827 3348 dbSNP
rs763022016 3352 dbSNP
rs868123459 3354 dbSNP
rs764250866 3356 dbSNP
rs373299996 3357 dbSNP
rs781601950 3358 dbSNP
rs766279261 3359 dbSNP
rs753736482 3360 dbSNP
rs754808728 3361 dbSNP
rs376387324 3363 dbSNP
rs757938767 3367 dbSNP
rs1279938052 3368 dbSNP
rs777373486 3369 dbSNP
rs746466416 3373 dbSNP
rs1043045061 3374 dbSNP
rs1483806677 3377 dbSNP
rs753827356 3380 dbSNP
rs200671729 3382 dbSNP
rs1187716562 3385 dbSNP
rs145663031 3386 dbSNP
rs770151276 3387 dbSNP
rs775776359 3388 dbSNP
rs1428027054 3390 dbSNP
rs377678649 3393 dbSNP
rs371121242 3397 dbSNP
rs774529611 3398 dbSNP
rs1302775843 3401 dbSNP
rs1486659307 3403 dbSNP
rs372949290 3405 dbSNP
rs753830573 3407 dbSNP
rs754902996 3408 dbSNP
rs1361826699 3409 dbSNP
rs752393429 3411 dbSNP
rs758106647 3413 dbSNP
rs904193942 3419 dbSNP
rs1355231015 3421 dbSNP
rs998742625 3421 dbSNP
rs145391389 3424 dbSNP
rs757796270 3425 dbSNP
rs1400836511 3426 dbSNP
rs1027707757 3434 dbSNP
rs1014071371 3435 dbSNP
rs1024997340 3438 dbSNP
rs1472302713 3440 dbSNP
rs969484404 3445 dbSNP
rs1004698976 3446 dbSNP
rs1002153300 3447 dbSNP
rs149201276 3448 dbSNP
rs116582998 3451 dbSNP
rs1286523342 3457 dbSNP
rs1208301365 3458 dbSNP
rs926942067 3459 dbSNP
rs117110774 3466 dbSNP
rs908814235 3470 dbSNP
rs1339063865 3471 dbSNP
rs965564096 3475 dbSNP
rs914297134 3476 dbSNP
rs976954964 3483 dbSNP
rs1346456305 3484 dbSNP
rs921013736 3485 dbSNP
rs143331393 3486 dbSNP
rs1189605880 3491 dbSNP
rs112222370 3492 dbSNP
rs542583964 3494 dbSNP
rs925613333 3496 dbSNP
rs1167197234 3497 dbSNP
rs934338614 3500 dbSNP
rs1475749548 3502 dbSNP
rs944957086 3505 dbSNP
rs562291127 3508 dbSNP
rs895750110 3510 dbSNP
rs75925559 3524 dbSNP
rs551173939 3527 dbSNP
rs181585044 3534 dbSNP
rs756646847 3535 dbSNP
rs1002208675 3537 dbSNP
rs1272566335 3537 dbSNP
rs887852684 3537 dbSNP
rs1335818862 3540 dbSNP
rs1371246899 3541 dbSNP
rs1327526013 3542 dbSNP
rs1380342038 3552 dbSNP
rs1353720954 3561 dbSNP
rs1170958207 3562 dbSNP
rs1454211897 3564 dbSNP
rs1423027348 3566 dbSNP
rs766704392 3572 dbSNP
rs1312995209 3580 dbSNP
rs151182323 3591 dbSNP
rs1236240400 3592 dbSNP
rs1253825437 3593 dbSNP
rs1262043276 3593 dbSNP
rs1195742518 3598 dbSNP
rs952716602 3599 dbSNP
rs1456672784 3600 dbSNP
rs1004653561 3603 dbSNP
rs1205743206 3608 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ugcaaauuuaaaguGGGGAAGa 5'
                        ||||||| 
Target 5' --------------CCCCUUCc 3'
 		1 - 8
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000404826.2 | 3UTR | CCCCUUCCUUCUCACCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
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133 hsa-miR-3179 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT102087 GIGYF1 GRB10 interacting GYF protein 1 2 4
MIRT110061 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 2 6
MIRT112198 BTG2 BTG anti-proliferation factor 2 2 2
MIRT117668 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT146657 MINK1 misshapen like kinase 1 2 2
MIRT175505 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT180535 TXNIP thioredoxin interacting protein 2 2
MIRT190624 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT190650 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT366902 NONO non-POU domain containing octamer binding 2 2
MIRT443554 ZFP3 ZFP3 zinc finger protein 2 2
MIRT445953 MLLT11 MLLT11, transcription factor 7 cofactor 2 2
MIRT446042 HMCN1 hemicentin 1 2 2
MIRT447968 MSH6 mutS homolog 6 2 2
MIRT448634 ONECUT1 one cut homeobox 1 2 2
MIRT449316 MRO maestro 2 2
MIRT451380 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451547 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451807 CDCA3 cell division cycle associated 3 2 4
MIRT451916 ILK integrin linked kinase 2 2
MIRT451938 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT452189 KIAA1456 KIAA1456 2 2
MIRT452498 HMGXB3 HMG-box containing 3 2 2
MIRT452548 ZNF467 zinc finger protein 467 2 2
MIRT453844 SDK1 sidekick cell adhesion molecule 1 2 2
MIRT454515 ZFYVE27 zinc finger FYVE-type containing 27 2 2
MIRT455363 KDM5C lysine demethylase 5C 2 2
MIRT455455 EPB41L4B erythrocyte membrane protein band 4.1 like 4B 2 2
MIRT455628 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 10
MIRT455639 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 10
MIRT455690 GLO1 glyoxalase I 2 2
MIRT456300 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT456784 MTHFSD methenyltetrahydrofolate synthetase domain containing 2 2
MIRT456819 PIGP phosphatidylinositol glycan anchor biosynthesis class P 2 2
MIRT457566 ZNF34 zinc finger protein 34 2 2
MIRT457604 IDS iduronate 2-sulfatase 2 2
MIRT458236 NXPH3 neurexophilin 3 2 2
MIRT458313 TNFAIP8L3 TNF alpha induced protein 8 like 3 2 2
MIRT458350 NOC2L NOC2 like nucleolar associated transcriptional repressor 2 2
MIRT458670 GPR35 G protein-coupled receptor 35 2 2
MIRT459675 VPS37C VPS37C, ESCRT-I subunit 2 2
MIRT461126 RAB36 RAB36, member RAS oncogene family 2 2
MIRT461918 NECAB3 N-terminal EF-hand calcium binding protein 3 2 2
MIRT462301 PPM1H protein phosphatase, Mg2+/Mn2+ dependent 1H 2 2
MIRT463520 ZBTB7B zinc finger and BTB domain containing 7B 2 2
MIRT464378 URM1 ubiquitin related modifier 1 2 2
MIRT464614 UBE4B ubiquitination factor E4B 2 2
MIRT464711 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 2
MIRT465520 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT465974 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 2
MIRT466058 TMEM189 transmembrane protein 189 2 2
MIRT466548 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT466647 TAGLN2 transgelin 2 2 2
MIRT467357 SP2 Sp2 transcription factor 2 2
MIRT468744 SDC2 syndecan 2 2 2
MIRT470244 PRRC2A proline rich coiled-coil 2A 2 2
MIRT471426 PDIA6 protein disulfide isomerase family A member 6 2 2
MIRT471732 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT472190 NHP2L1 small nuclear ribonucleoprotein 13 2 2
MIRT472450 NAV2 neuron navigator 2 2 6
MIRT474563 KLHDC3 kelch domain containing 3 2 2
MIRT474936 KCTD15 potassium channel tetramerization domain containing 15 2 2
MIRT475165 IP6K1 inositol hexakisphosphate kinase 1 2 2
MIRT475399 ICMT isoprenylcysteine carboxyl methyltransferase 2 4
MIRT475426 ICK intestinal cell kinase 2 2
MIRT477090 FAM168A family with sequence similarity 168 member A 2 2
MIRT478458 DAB2 DAB2, clathrin adaptor protein 2 2
MIRT478953 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT480096 CALR calreticulin 2 2
MIRT481924 ANKRD33B ankyrin repeat domain 33B 2 2
MIRT483217 APOA1 apolipoprotein A1 2 6
MIRT483882 TGIF1 TGFB induced factor homeobox 1 2 2
MIRT483923 SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 2 2
MIRT483942 LENG8 leukocyte receptor cluster member 8 2 4
MIRT484209 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT484512 SYT7 synaptotagmin 7 2 2
MIRT484709 RNF11 ring finger protein 11 2 2
MIRT485356 MYO1C myosin IC 2 4
MIRT485615 FOSL1 FOS like 1, AP-1 transcription factor subunit 2 4
MIRT486584 ZNF619 zinc finger protein 619 2 2
MIRT487013 C2orf82 chromosome 2 open reading frame 82 2 2
MIRT487621 C20orf96 chromosome 20 open reading frame 96 2 2
MIRT487801 GPR20 G protein-coupled receptor 20 2 4
MIRT488134 GPR107 G protein-coupled receptor 107 2 2
MIRT488773 FXYD1 FXYD domain containing ion transport regulator 1 2 2
MIRT488854 UBTF upstream binding transcription factor, RNA polymerase I 2 2
MIRT489783 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT490102 FN3K fructosamine 3 kinase 2 2
MIRT490389 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT490434 MYL9 myosin light chain 9 2 2
MIRT490451 GLUD1 glutamate dehydrogenase 1 2 2
MIRT490880 OSBP oxysterol binding protein 2 2
MIRT491037 ALPK3 alpha kinase 3 2 2
MIRT491250 HCN2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 2 2
MIRT491748 SEMA3F semaphorin 3F 2 2
MIRT492235 SLC48A1 solute carrier family 48 member 1 2 2
MIRT492490 RAPGEF1 Rap guanine nucleotide exchange factor 1 2 2
MIRT492505 RANBP10 RAN binding protein 10 2 4
MIRT492773 PDGFB platelet derived growth factor subunit B 2 2
MIRT492922 NFAT5 nuclear factor of activated T-cells 5 2 2
MIRT493459 ITFG3 family with sequence similarity 234 member A 2 2
MIRT493654 HDLBP high density lipoprotein binding protein 2 2
MIRT494011 DUSP9 dual specificity phosphatase 9 2 2
MIRT499412 PLCG2 phospholipase C gamma 2 2 4
MIRT499552 C15orf43 telomere repeat binding bouquet formation protein 2 2 2
MIRT501836 NCOA2 nuclear receptor coactivator 2 2 2
MIRT501950 MAT2A methionine adenosyltransferase 2A 2 10
MIRT504066 KCTD12 potassium channel tetramerization domain containing 12 2 4
MIRT504509 PPP1R9B protein phosphatase 1 regulatory subunit 9B 2 2
MIRT508466 HOXB6 homeobox B6 2 4
MIRT512373 CPM carboxypeptidase M 2 2
MIRT513578 EVX1 even-skipped homeobox 1 2 2
MIRT517763 ZNF366 zinc finger protein 366 2 4
MIRT519773 ZNF354B zinc finger protein 354B 2 8
MIRT523568 GGCX gamma-glutamyl carboxylase 2 4
MIRT532802 CLDN11 claudin 11 2 2
MIRT544299 TSPYL1 TSPY like 1 2 2
MIRT544862 MYH2 myosin heavy chain 2 2 4
MIRT556731 KLHL15 kelch like family member 15 2 4
MIRT564347 AKR1B10 aldo-keto reductase family 1 member B10 2 2
MIRT568924 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT569012 CXorf36 chromosome X open reading frame 36 2 2
MIRT569256 FAM129B family with sequence similarity 129 member B 2 2
MIRT569591 PRELP proline and arginine rich end leucine rich repeat protein 2 2
MIRT569779 SAMD14 sterile alpha motif domain containing 14 2 2
MIRT570034 FAM228A family with sequence similarity 228 member A 2 2
MIRT573803 FRMPD4 FERM and PDZ domain containing 4 2 2
MIRT574190 ZNF264 zinc finger protein 264 2 2
MIRT576153 Hmox1 heme oxygenase 1 2 2
MIRT611311 CA8 carbonic anhydrase 8 2 4
MIRT673429 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT674976 SH3BP2 SH3 domain binding protein 2 2 2
MIRT692712 MEAF6 MYST/Esa1 associated factor 6 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3179 Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-3179 Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3179 Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-3179 Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-3179 Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-3179 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3179 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-3179 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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