miRTarBase - #MIRT457088


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pre-miRNA Information
pre-miRNA hsa-mir-1247   
Genomic Coordinates chr14: 101560287 - 101560422
Synonyms MIRN1247, hsa-mir-1247, MIR1247
Description Homo sapiens miR-1247 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-1247-3p
Sequence 74| CCCCGGGAACGUCGAGACUGGAGC |97
Evidence Not_experimental
Experiments
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs765946490 1 dbSNP
rs1167774642 3 dbSNP
rs369874810 4 dbSNP
rs1295169065 5 dbSNP
rs1368557653 7 dbSNP
rs375254504 10 dbSNP
rs1049152389 16 dbSNP
rs774601647 21 dbSNP
rs1317190334 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol XPNPEP3   
Synonyms APP3, ICP55, NPHPL1
Description X-prolyl aminopeptidase 3
Transcript NM_022098   
Expression
Putative miRNA Targets on XPNPEP3
3'UTR of XPNPEP3
(miRNA target sites are highlighted)		 
>XPNPEP3|NM_022098|3'UTR
   1 CCTTCACTGCGGCCCACATGCACCTCAGGTTCAAAATGGGTGTCTTCTGGCAGCCCTGCACGTGTGCTTTCTGAGTGTCT
  81 CTGTGTGTGCATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGTGTGGGGGGTTTT
 161 TTGTTTTAAGTAGTTAGAAGTCTGGGAAAATGAATTTTTGAATAGTATGTTACTGCAGCTTTGGTAACATTAATTCTATA
 241 GAATTAATGATCAGAGCAAGTTTAATTTTTAAACATAAAGGTCTTGGTTACACATGTCCATGCATTCCAGTTAACACATT
 321 TAAACATATAGAAAATTCACTTCTTCTTTCAAGTCCTTCCCTTTCTATACTTTTGCTGAGATCAACCCAATATCATAAGA
 401 AGTTTGTGTGATGCCTGTATTTTTAGCTAATTACCAAGGTCTCTGCCTATGCAAAAATTCATCTTTCGGTGATTGTGGGC
 481 GGCCAATACATACCTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATATGAGCCCTCAGGG
 561 GCACTGGTGTCCTGCAGTCTTACTAGTCAGCCACAGTCCAGGTTCCAGCAACACTAGCTACCTACCAAACAAAACACTTC
 641 TGAGCTTTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATGGAAGAGAAAGA
 721 AAATTATATATGTATATACTAAAGATCCAGACATCAGGGCTGGGCACAGCGGTTCCGCCTGTAATCCCAGCACTTTGGGA
 801 GGTCCAGGCAGGTGGATCTCTTGAGACCAGGAGGTCAAGACCAGCCTGGCCAACGTGGTGAAACACTGTCTCTACTAAAA
 881 ATACAAAAATGAGCTGGGTGTGATGATACATGCCTGTAATCCTGGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAA
 961 CCTGGGAGGTGGAGGTTGCAGTGAGCTGAGCTCATGCGACTGCACTCCAGCCTGGGTGACTGAGCAAGACTCTGCCTCAA
1041 AAAAACAAATAAATAAATAAAATCCTGACATCCTGCCATCTTTTCTCTTCAATTTAAAGTTGATTTCTTAATGATGACTT
1121 CAAAAATTAATAAAAAGAAAAGAAAAAAATGATTTCTGGCCGGGCGTGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGG
1201 AGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATTGAGACCTCCTGGCTAACACGGTGAAACCCCGTCTTTACTAAAAAT
1281 ACAAAAAAAATTAGCTGGGCGTGGTGGCGGATGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGA
1361 ACCCAGAAGGCAGAGCTTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCA
1441 AAAAAAAAAAAAAAAAAGAAAAAAAAAAGAAAGATTTCTTTCGCAGATATCCCTGCTCCCTCTATAGATTCTTAATGCAC
1521 TGACCCTCACAGGTTACCCTTTTAGCTGTTGTGCTGCGCAGGAGCAGATCCTCTACTTACGTACCCTGTCAGAGTCACAG
1601 TAGTAGCGCCCAGTTTTCAGAGAAGTACCCCTGTTATCATTCTGTGATTTCCTCTAGTGCTAATAGAAACAAAATATGGA
1681 ATCTACCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGGGAGTGCAGTGGTAAAGAGTCA
1761 TACTTCTTTTTTTTTTTTTTTTTTGGAGACAGAGTCTCGCTCTGTCGCCTGGGCTGGATGGAGTGCAGTGGCGTAATCTC
1841 AGCTCACTACAACCTCCACCACCTGGGTTCAGGCAATTCTCCTGCCTCAGCCTCCCAAGTAACTGGGACTACAGGTGCAC
1921 GCTGCCATGCCCAGCTAATTTTTTGTATTTTAGTAGAGACAGGGTTTCACCCTGTTGCCCAGGCCGGTCTCAAACTCCTG
2001 AGCTCCGGCAATCCGCCCACCTCAGCCTCCCAAAGTGCTAGGATTACAGGCATGAGCCACTGCGCCCGGTGTAAGAGTCA
2081 TATTTTTTTAAACACAAACATTGGATACAATTATACAGCAACTCAGTTTGCAAGATGAACAGGGCTAGATTACCACAGAT
2161 AGCTTATTTAGGAGCGTCTGTGATAGAGGGAAGCTTTAAGAACCAGTGTGTTCACCTCCTTTAAACCTGGATATGAGGTC
2241 AAGATGTATAAAACATGCCAATTGTTAGAACACAAATTTGAGGGTTTCTTAAAAAAACAATTTGTATTAGGGAAGCACAA
2321 GCTAGGGGATTAACAATCTCTGTAATGCTGGAAGTTTGCCTATCTTATCAGGGAAACCCAGGGTACAGAGTGAAAAGCAG
2401 ACAGGCAGTGACTTCCTCAAGAGACAGATAATGTGAAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGG
2481 AATGCCTGGCTTTGCGCACCTTATCTAAGCAGCTCTCAGAATGGAGGCTGCACAGCTGGAGTCTCCATCCCCCATACCCA
2561 CCTTCCCACCTCCCTCCAATTTCTCAATCCAGAGCTTTTTAAAAAAAGGGGAGGGAAATAACTCCACAGCTCTGGCTGCT
2641 CACTTCCCAGGCTCTGTGCCCCCAACAGCCCTTTCCTTGGATTGTGTTTCCTTTGTTCATTTGTAATCCAGGAATAAGGA
2721 ATTTCCTTTTCTTCTTGTATCATTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACACTGTCACCGG
2801 GGCTGGTGTGCAATAGCGAGACCTCAGCTCCCTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCC
2881 CGAATAGCTAGGAATACAGGCGCCTGCCACCACACCCGGCTATTTTTTTGTATTTTAAATAGAGACGAGGTTTCACTGTG
2961 TTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGATCTGCCCGCCTCGGCCTCCCTAAGTGCTGCGATTACAGACGTGAG
3041 CCACCGCACCTCCTGTATCATTTTCTATGGTCTAAACTTTTCTAGCTAAAAGCCTAGGTAGCTTGTATGTATAGCAGCAT
3121 ACTTGGACATGAAACACACTTCTGGTTAGATTCCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAG
3201 AATTCTTCTGGTGATTTTCAGTCCCTGACCCAGGTATATTGTCCTTTGAGTCCCAGATTAACTAACTATAGCAGCTAAGC
3281 ATTTGAATCAGACTTCTCATAGCAATGTTATGGGCTGTCTGATATATTCAGGATTTGTTGAGCAGATAAGCTGTGTGTGA
3361 TCTTACTCATTCTCAGCCATGCCGCAGACATACCCATTTCCCTTTAGTAATTTTTTAATACAGAGAATGCTATTAACTGT
3441 TACTGGATATCAAATAATTTTATTTTTCTAATAGTATTTTCCAAATATTTCTTAAAATTCTTAAAATTTAGGTTAAAGTT
3521 TGCTGGTCTCTTACATTTAATAAAGCTGGGACTTGAAGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTT
3601 CTAAGGGTAAAAAGTGAATAAGATAAATTCAGAGTTTTAAGGTAAAGGCTTTATATTAGCTTTTTTTTTTTTTAAAGGTT
3681 TTTTGTGGGGTTTTTTTGTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGAT
3761 CTTGGCTCACTGCAACCTCCATCTCCCGGGTTCAGGCAATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCG
3841 CGTGCCACCATGCCCGGCTAGTTTATTGTATTTTTAGTAGAGATGGGGTTTTACTGTGTTAGCCAGGATGGTCTCAATCT
3921 CCTGACCTCATAATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCAGCCTTTTTAA
4001 AGTTTTTAATTGACATATAATTGTACGTATTTACAGGGTAAATAATGATGTTTTGATACATATATAATGATCAGATCAGA
4081 ACAATTAGCATATCCATCACATTGAACATTTATCATTTATTTGTGTTGAGCCTTTAGTTCTTTTTTTTTTTTGAGATAGA
4161 GTCTCACTCTGTCACCCAGGCTGGAGTACAGTGGTGTGATCTTGGCTCACTGCAACCTCCACCCACCGGCTTCAACCAAT
4241 TCTCCTGCCTCAGCCTCCCTAGTAACTGGGATTACAGGCACCTGCCACCACACCCAATTTTTGTATTTTTAGTAGAGACG
4321 GGGTTTCACCATCTTGGCCAGGCCAGGCTGGTCTTGATCTCCTGACCTTGTGATCCACCCACCTCAGCTTCCCAAACTGC
4401 TGGGATTACAGGCATGAGCCACGGCCCCCAGCCAGAGACAGTCTTGCTTTGTCGCCAGGCTGGAGTGTAGTGGCGCCATC
4481 TTGGCTCACTGCAACCTCCAACTCCCTGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCAC
4561 GCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTTGATCTCC
4641 TGACCTCGTGATCTGCCCACTTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCCAGCCGAGCCTTTA
4721 GTTCTAAGTATAATAAATAATATATATACCAGGCATTCCTATTAAAAATCTTAACTTAAAAAAAATTACTCAAATGTTAC
4801 TACTGGAATTTTTCTCCCTGAATTGAAGATACATGGTTAGATCATTAACAATACCACCTAAATGAAGGAAACATATCTGG
4881 ATATCCAGTGTCACATACTTTTATGTATTTATTTCAGGAATTACTATTTTGTCACCATAATTAGGAAACAGACTGTGTTC
4961 TTTATTTGAAACACAACAGTATAAATACTATAGTAAAGTTGGGTGCAGTGGATCACAGCTATAATCCCAGCACTTTGGGA
5041 GACCAAGGAGGGATGGTCACTTGAGCCCAGGAGTTTGAGACCAGCCTAGGCAACATAGAGAGACCTTGTCTCAACAAAAA
5121 AATTTAAAGTTAGCCAGGTGTGGTGGTTTGCACCTATAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCGCTTGAG
5201 CTTAGGAGGTCAAGGCTGCAGTGAGCCATGATTGTGCCACTTCACCCTGGGCAACAGAGAAAGACCCTGTCTCAATAAAA
5281 AAGAAGAGAAAAACTGGAGTGAGAACTCTCCTCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAA
5361 CTTAAAGTACTGTGTGTGCATCTTCCTTCAAAACCTTGCTTTTTTCTCCGTTTTTGTAAGGTGAGAAAGGGAAAAACCTT
5441 CACCGTAGAAATACTGTCTTGAGATTAAGATACAAATAAAACATGTTAAACCTCCATCTAAAGACATTGCAACTTATTAA
5521 AACAGAAAAATGTACCTTTGTTATGTCTTTCCAAATATCCACACCCACACCCTGTTCAGCTTTGTTAATAATACAGAGAT
5601 CAGAAATGTGAAGCACAAATGCTGCTTCTCCCCCTCCTGTTCCCATGTCAGAGATGGAGAAGAAAGCACAGTGAGCTGTT
5681 CACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATAACTTCTGCCAATAAAACAGAATTTGAGTTAG
5761 AACCTATCTGCTGTCCCTCAACTAGTGTCTGATAGCTGAGAATGTAATTCGTTTGTGTGTCTATTAGAAAATTAGGCAGG
5841 CACCACAGACAGTAGCAACATAAAGGAACCTGCTTAGAAGAGGTTTTTATGGTGTGATTGTGTTTTTTTTTTTTTAATTT
5921 TTGTTTCCTGAAGTAGAATCCATAGCTCAAAACAAGTTTTAAGCCTGAGAAAATATAATTTGAGGTGTTTTTTATGCTCC
6001 TAATGAAAAGATGAATGAATGCATCATTAAACCTTAACAGTAGAGCAGAATTTCACTGTTACAAACCACATGGGTTCTCC
6081 TGGTTGTGCTGCTGTTCTCTACCTGTGTGTCACTGAGTTTGAGCATCATTATTGTTTGAATCAGAGGACCCACTGGAATC
6161 AAGGCTTCTTGGAATTGCGCAAGAATCTGAGAAAACTTCAATCTTTACCAGCATTTCTTAATGCTTTCCATGACTTTTGT
6241 GCAATTATATAAGTTCAGTTTAGACAAAATGCTGTTACTTTTTAAGGCATTACTAATAACTGAAAATAGTTACGTCATTG
6321 CCCATCAAGGGAAAAGCACTTGTAACTGTCATTTAAAAAAAATAAAACTATAAAACAATATAGAAAAAAAAAAAAAAAAA
6401 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cgAGGUCAGAGCUGCAAGGGCCCc 5'
            | ||  ||| |:  ||||||| 
Target 5' acTGCAACCTCCAT-CTCCCGGGt 3'
 3769 - 3791 153.00 -20.10
2 
miRNA  3' cgaggUCAGAG-CUGCAAG-GGCCCc 5'
               ||||||  ||  || ||||| 
Target 5' gacggAGTCTCACACTGTCACCGGGg 3'
 2777 - 2802 131.00 -23.90
3 
miRNA  3' cgAGGUC-A-GAGCUGCAAGGGCCCc 5'
            ||::| | ||| || ||||| || 
Target 5' gcTCTGGCTGCTC-AC-TTCCCAGGc 3'
 2629 - 2652 128.00 -20.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
900010 3 ClinVar
900011 38 ClinVar
341679 86 ClinVar
341680 115 ClinVar
900012 151 ClinVar
901171 391 ClinVar
341681 420 ClinVar
341682 468 ClinVar
341683 532 ClinVar
341684 636 ClinVar
341685 638 ClinVar
341686 701 ClinVar
341687 810 ClinVar
901723 870 ClinVar
341688 878 ClinVar
901724 996 ClinVar
341689 1047 ClinVar
901725 1077 ClinVar
341690 1162 ClinVar
901726 1163 ClinVar
341691 1206 ClinVar
341692 1222 ClinVar
341693 1242 ClinVar
341694 1247 ClinVar
341695 1250 ClinVar
341696 1266 ClinVar
902631 1302 ClinVar
902632 1377 ClinVar
902633 1395 ClinVar
341697 1428 ClinVar
902634 1440 ClinVar
341698 1450 ClinVar
341699 1453 ClinVar
341700 1459 ClinVar
900077 1471 ClinVar
900078 1532 ClinVar
900079 1558 ClinVar
341701 1607 ClinVar
341702 1697 ClinVar
341703 1763 ClinVar
341704 1764 ClinVar
341705 1799 ClinVar
341706 1803 ClinVar
900080 1831 ClinVar
341707 1877 ClinVar
901239 1965 ClinVar
901240 1997 ClinVar
341708 2012 ClinVar
341709 2043 ClinVar
901241 2176 ClinVar
901242 2313 ClinVar
901243 2407 ClinVar
341710 2537 ClinVar
341711 2612 ClinVar
341712 2628 ClinVar
341713 2630 ClinVar
341714 2631 ClinVar
901784 2650 ClinVar
341715 2743 ClinVar
341716 2758 ClinVar
341717 2763 ClinVar
341718 2769 ClinVar
341719 2780 ClinVar
341720 2861 ClinVar
341721 2882 ClinVar
341722 2882 ClinVar
341723 2923 ClinVar
341724 2959 ClinVar
341725 2979 ClinVar
341726 3004 ClinVar
341727 3047 ClinVar
900142 3113 ClinVar
341728 3138 ClinVar
900143 3195 ClinVar
341729 3239 ClinVar
341730 3299 ClinVar
341731 3309 ClinVar
341732 3352 ClinVar
341733 3367 ClinVar
341734 3412 ClinVar
901303 3543 ClinVar
901304 3619 ClinVar
341735 3661 ClinVar
341736 3661 ClinVar
341737 3691 ClinVar
901305 3699 ClinVar
901306 3707 ClinVar
901307 3757 ClinVar
341738 3841 ClinVar
341739 3956 ClinVar
901851 3974 ClinVar
341740 4141 ClinVar
901852 4159 ClinVar
901853 4167 ClinVar
901854 4199 ClinVar
341741 4217 ClinVar
341742 4228 ClinVar
341743 4261 ClinVar
341744 4363 ClinVar
902761 4531 ClinVar
341745 4562 ClinVar
341746 4587 ClinVar
341747 4589 ClinVar
341748 4615 ClinVar
902762 4646 ClinVar
341749 4703 ClinVar
900199 4790 ClinVar
341750 4991 ClinVar
341751 5097 ClinVar
900200 5107 ClinVar
900201 5163 ClinVar
900202 5295 ClinVar
341752 5328 ClinVar
341753 5411 ClinVar
901364 5446 ClinVar
341754 5509 ClinVar
901365 5548 ClinVar
341755 5632 ClinVar
901366 5642 ClinVar
341756 5644 ClinVar
341757 5650 ClinVar
901367 5657 ClinVar
901909 5730 ClinVar
341758 5743 ClinVar
341759 5903 ClinVar
341760 5903 ClinVar
901910 6056 ClinVar
901911 6106 ClinVar
341761 6165 ClinVar
341762 6179 ClinVar
901912 6180 ClinVar
341763 6202 ClinVar
COSM1034507 1 COSMIC
COSN30461501 2 COSMIC
COSN26433714 12 COSMIC
COSN5771366 48 COSMIC
COSN31593118 52 COSMIC
COSN30506939 117 COSMIC
COSN30161243 119 COSMIC
COSN30109487 133 COSMIC
COSN30188596 151 COSMIC
COSN30100760 152 COSMIC
COSN24510047 153 COSMIC
COSN28881740 157 COSMIC
COSN23687728 178 COSMIC
COSN1262247 179 COSMIC
COSN21181162 201 COSMIC
COSN23753283 1051 COSMIC
COSN27327722 1081 COSMIC
COSN32061617 1458 COSMIC
COSN9166309 1621 COSMIC
COSN18766456 1785 COSMIC
COSN22594332 2236 COSMIC
COSN26628823 2252 COSMIC
COSN6563019 2365 COSMIC
COSN14460626 2379 COSMIC
COSN1899396 2434 COSMIC
COSN23237776 2630 COSMIC
COSN23975121 2776 COSMIC
COSN29501081 3046 COSMIC
COSN25571999 3241 COSMIC
COSN23161453 3429 COSMIC
COSN26197775 3501 COSMIC
COSN17236282 3699 COSMIC
COSN29751074 3889 COSMIC
COSN25458447 4167 COSMIC
COSN1899397 5412 COSMIC
COSN25024557 5747 COSMIC
COSN27449193 5916 COSMIC
COSN26168198 6157 COSMIC
COSN9166310 6332 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs149716028 3 dbSNP
rs373500631 10 dbSNP
rs766593581 11 dbSNP
rs752109776 18 dbSNP
rs1403028692 22 dbSNP
rs1284149542 24 dbSNP
rs1416613915 27 dbSNP
rs755399912 28 dbSNP
rs1241734420 30 dbSNP
rs796220255 39 dbSNP
rs777363571 40 dbSNP
rs1260726149 41 dbSNP
rs1352602898 50 dbSNP
rs1211173923 52 dbSNP
rs534092637 62 dbSNP
rs1486085948 63 dbSNP
rs1262361345 71 dbSNP
rs1219290699 76 dbSNP
rs887907600 84 dbSNP
rs147042984 85 dbSNP
rs886057509 86 dbSNP
rs1001984329 88 dbSNP
rs1177972688 92 dbSNP
rs576504217 97 dbSNP
rs1006404107 99 dbSNP
rs1375663344 108 dbSNP
rs886057510 115 dbSNP
rs1465501455 122 dbSNP
rs1016835525 136 dbSNP
rs138316056 151 dbSNP
rs1439412385 151 dbSNP
rs1394431157 152 dbSNP
rs997505988 153 dbSNP
rs1030774858 157 dbSNP
rs6002204 158 dbSNP
rs1169327166 162 dbSNP
rs993628689 182 dbSNP
rs891036810 197 dbSNP
rs1428827408 201 dbSNP
rs1390839427 202 dbSNP
rs779051968 202 dbSNP
rs1189388525 204 dbSNP
rs748398905 208 dbSNP
rs1376448073 215 dbSNP
rs1252424845 225 dbSNP
rs999217653 230 dbSNP
rs1337053407 231 dbSNP
rs954969919 239 dbSNP
rs555872800 242 dbSNP
rs987861616 259 dbSNP
rs1227049521 276 dbSNP
rs1308431060 295 dbSNP
rs1017627055 301 dbSNP
rs1232701854 304 dbSNP
rs1303895083 310 dbSNP
rs574328573 312 dbSNP
rs1327192576 321 dbSNP
rs1442396734 322 dbSNP
rs965156475 330 dbSNP
rs1462231549 339 dbSNP
rs781617642 340 dbSNP
rs768334700 341 dbSNP
rs187655131 347 dbSNP
rs1252384948 352 dbSNP
rs1173749185 359 dbSNP
rs926035693 368 dbSNP
rs936451181 371 dbSNP
rs1395545640 372 dbSNP
rs987993321 374 dbSNP
rs970240914 382 dbSNP
rs142395135 391 dbSNP
rs1481104631 393 dbSNP
rs1253331949 397 dbSNP
rs371744775 398 dbSNP
rs941566365 410 dbSNP
rs1347627205 415 dbSNP
rs1304723771 418 dbSNP
rs749468351 420 dbSNP
rs1468653895 440 dbSNP
rs904889987 449 dbSNP
rs1192519265 450 dbSNP
rs1265036406 453 dbSNP
rs1333466052 457 dbSNP
rs1305736792 467 dbSNP
rs12169203 468 dbSNP
rs1171112431 469 dbSNP
rs1310705602 470 dbSNP
rs1037372380 482 dbSNP
rs909479429 487 dbSNP
rs777846267 494 dbSNP
rs1375905253 497 dbSNP
rs545632953 504 dbSNP
rs1468580844 509 dbSNP
rs146566620 517 dbSNP
rs993597472 526 dbSNP
rs942150716 527 dbSNP
rs1039239391 531 dbSNP
rs564294482 532 dbSNP
rs1252843884 535 dbSNP
rs1209012973 537 dbSNP
rs890689018 552 dbSNP
rs1485540928 554 dbSNP
rs1281572835 557 dbSNP
rs1213602663 561 dbSNP
rs374276754 568 dbSNP
rs1260672326 573 dbSNP
rs933433040 575 dbSNP
rs1239061896 579 dbSNP
rs1337036395 582 dbSNP
rs1051767259 583 dbSNP
rs902471362 586 dbSNP
rs1355823172 587 dbSNP
rs148233991 596 dbSNP
rs190791491 598 dbSNP
rs1384109244 599 dbSNP
rs1000608241 601 dbSNP
rs1031521174 607 dbSNP
rs183171758 618 dbSNP
rs886057511 636 dbSNP
rs886057512 638 dbSNP
rs1414354190 639 dbSNP
rs747043660 652 dbSNP
rs563019823 656 dbSNP
rs866385677 662 dbSNP
rs530031874 663 dbSNP
rs1258624895 668 dbSNP
rs1190448903 669 dbSNP
rs1023255110 697 dbSNP
rs576978422 701 dbSNP
rs1206302611 702 dbSNP
rs1352214548 710 dbSNP
rs1270772604 711 dbSNP
rs1386551225 711 dbSNP
rs1232280588 714 dbSNP
rs548574099 716 dbSNP
rs1294779968 719 dbSNP
rs981560705 731 dbSNP
rs1035455524 733 dbSNP
rs1318873856 734 dbSNP
rs772249372 737 dbSNP
rs1217276745 739 dbSNP
rs567008673 745 dbSNP
rs1256894413 749 dbSNP
rs1461004842 760 dbSNP
rs1418793483 767 dbSNP
rs3200561 769 dbSNP
rs1165240773 771 dbSNP
rs775853068 772 dbSNP
rs1372937526 777 dbSNP
rs534532859 778 dbSNP
rs1244596822 781 dbSNP
rs3180259 785 dbSNP
rs57486044 810 dbSNP
rs3200563 811 dbSNP
rs1176874116 813 dbSNP
rs1136921 830 dbSNP
rs926533871 838 dbSNP
rs1264992001 839 dbSNP
rs974898815 843 dbSNP
rs1192807040 855 dbSNP
rs1338499496 856 dbSNP
rs1270589619 859 dbSNP
rs868644704 861 dbSNP
rs3180260 862 dbSNP
rs3180261 863 dbSNP
rs1423058661 866 dbSNP
rs1406005540 869 dbSNP
rs1136923 875 dbSNP
rs5995966 878 dbSNP
rs3200567 879 dbSNP
rs1141887 880 dbSNP
rs1325171250 887 dbSNP
rs933505390 888 dbSNP
rs1136924 890 dbSNP
rs777002535 894 dbSNP
rs1325772969 897 dbSNP
rs1408475484 901 dbSNP
rs1136925 909 dbSNP
rs920331788 911 dbSNP
rs1419227547 923 dbSNP
rs902609542 926 dbSNP
rs1136926 929 dbSNP
rs1451753347 935 dbSNP
rs1457535006 945 dbSNP
rs935317074 948 dbSNP
rs187903266 950 dbSNP
rs1053743652 970 dbSNP
rs1342716395 971 dbSNP
rs1454322313 978 dbSNP
rs929080814 986 dbSNP
rs1436911096 994 dbSNP
rs893048313 998 dbSNP
rs1011488544 999 dbSNP
rs1047881470 1004 dbSNP
rs890664982 1008 dbSNP
rs761413766 1011 dbSNP
rs574502323 1013 dbSNP
rs555836046 1015 dbSNP
rs1278085941 1022 dbSNP
rs1379320224 1027 dbSNP
rs1229522340 1034 dbSNP
rs1287375326 1036 dbSNP
rs1320761363 1041 dbSNP
rs1440141949 1042 dbSNP
rs541372877 1047 dbSNP
rs886057513 1047 dbSNP
rs1287940021 1051 dbSNP
rs574513942 1051 dbSNP
rs1487170501 1066 dbSNP
rs542021429 1070 dbSNP
rs1374086899 1076 dbSNP
rs150795967 1077 dbSNP
rs553731483 1091 dbSNP
rs1035826478 1100 dbSNP
rs1000171765 1104 dbSNP
rs1258123952 1111 dbSNP
rs1174920155 1127 dbSNP
rs1473205831 1132 dbSNP
rs950468376 1140 dbSNP
rs1004536198 1143 dbSNP
rs192071814 1143 dbSNP
rs764840110 1162 dbSNP
rs1411643653 1163 dbSNP
rs956091925 1166 dbSNP
rs1313835935 1167 dbSNP
rs1282104111 1169 dbSNP
rs1222081060 1170 dbSNP
rs1010366268 1174 dbSNP
rs546133316 1178 dbSNP
rs1372716048 1196 dbSNP
rs750125087 1197 dbSNP
rs1411982041 1199 dbSNP
rs1423483353 1203 dbSNP
rs138106052 1204 dbSNP
rs886057514 1206 dbSNP
rs1237708491 1207 dbSNP
rs926529730 1215 dbSNP
rs576301411 1216 dbSNP
rs543684422 1217 dbSNP
rs1293483098 1222 dbSNP
rs886057515 1222 dbSNP
rs1474050866 1230 dbSNP
rs1256399522 1234 dbSNP
rs562801862 1236 dbSNP
rs530216030 1237 dbSNP
rs935451533 1239 dbSNP
rs577143989 1242 dbSNP
rs886057516 1247 dbSNP
rs886057517 1250 dbSNP
rs929049167 1254 dbSNP
rs1215624688 1255 dbSNP
rs775572383 1256 dbSNP
rs548264406 1266 dbSNP
rs1396903816 1267 dbSNP
rs1381809791 1271 dbSNP
rs1287614298 1274 dbSNP
rs1430697835 1283 dbSNP
rs1345251163 1286 dbSNP
rs1321915628 1290 dbSNP
rs1444076088 1291 dbSNP
rs1416628188 1296 dbSNP
rs911634869 1301 dbSNP
rs185173339 1302 dbSNP
rs1039624331 1311 dbSNP
rs1185826372 1312 dbSNP
rs1482949439 1314 dbSNP
rs1179545002 1318 dbSNP
rs527721743 1324 dbSNP
rs3179547 1330 dbSNP
rs1000475141 1332 dbSNP
rs3179548 1334 dbSNP
rs1426255948 1338 dbSNP
rs1416686468 1342 dbSNP
rs905801263 1343 dbSNP
rs1003099112 1345 dbSNP
rs1293946437 1349 dbSNP
rs1214375593 1351 dbSNP
rs1056991638 1357 dbSNP
rs1438010457 1358 dbSNP
rs1393172807 1363 dbSNP
rs1004672178 1366 dbSNP
rs1016023516 1368 dbSNP
rs3179549 1373 dbSNP
rs188093993 1376 dbSNP
rs891838286 1377 dbSNP
rs1010242991 1385 dbSNP
rs1024368379 1386 dbSNP
rs995869895 1391 dbSNP
rs1191681729 1393 dbSNP
rs570854426 1395 dbSNP
rs1003362878 1396 dbSNP
rs1033954006 1397 dbSNP
rs959278950 1398 dbSNP
rs1204189037 1400 dbSNP
rs1343337444 1402 dbSNP
rs3179550 1406 dbSNP
rs1029634365 1407 dbSNP
rs1232827809 1409 dbSNP
rs867957545 1412 dbSNP
rs955012659 1416 dbSNP
rs988037079 1417 dbSNP
rs1388033334 1427 dbSNP
rs886057518 1428 dbSNP
rs1297252880 1435 dbSNP
rs1430099994 1436 dbSNP
rs368191630 1438 dbSNP
rs1171675180 1439 dbSNP
rs1217444904 1439 dbSNP
rs1176899716 1440 dbSNP
rs1209325070 1440 dbSNP
rs1248620014 1440 dbSNP
rs1277264699 1440 dbSNP
rs1305832579 1440 dbSNP
rs1347731061 1440 dbSNP
rs1395642400 1440 dbSNP
rs1483584321 1440 dbSNP
rs573345765 1440 dbSNP
rs765028727 1440 dbSNP
rs897284135 1440 dbSNP
rs924151650 1440 dbSNP
rs956872720 1440 dbSNP
rs1277798313 1441 dbSNP
rs113845149 1444 dbSNP
rs1352061680 1446 dbSNP
rs1310800062 1447 dbSNP
rs1402746187 1448 dbSNP
rs531776246 1448 dbSNP
rs989491612 1449 dbSNP
rs886057519 1450 dbSNP
rs1240029228 1451 dbSNP
rs553717950 1453 dbSNP
rs568016718 1454 dbSNP
rs1473070372 1455 dbSNP
rs535557822 1455 dbSNP
rs1479199137 1456 dbSNP
rs973326477 1456 dbSNP
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rs1491230222 1458 dbSNP
rs200350143 1458 dbSNP
rs1057362748 1459 dbSNP
rs1291067939 1459 dbSNP
rs886057520 1459 dbSNP
rs927187172 1459 dbSNP
rs938644431 1459 dbSNP
rs1232395924 1462 dbSNP
rs1027536981 1464 dbSNP
rs1336087509 1466 dbSNP
rs886232020 1466 dbSNP
rs1425076530 1467 dbSNP
rs1466540964 1470 dbSNP
rs530322352 1471 dbSNP
rs1397435911 1474 dbSNP
rs1319914066 1477 dbSNP
rs1457862219 1478 dbSNP
rs1174096930 1479 dbSNP
rs1163068681 1480 dbSNP
rs983097563 1481 dbSNP
rs911617285 1482 dbSNP
rs898933163 1483 dbSNP
rs1445820478 1484 dbSNP
rs1208737837 1493 dbSNP
rs996226017 1496 dbSNP
rs944485288 1499 dbSNP
rs542633699 1500 dbSNP
rs1270872627 1506 dbSNP
rs974921682 1514 dbSNP
rs1028693376 1517 dbSNP
rs922134920 1520 dbSNP
rs1285787045 1523 dbSNP
rs890700293 1524 dbSNP
rs560850527 1525 dbSNP
rs1434008942 1527 dbSNP
rs145932052 1532 dbSNP
rs1390996054 1546 dbSNP
rs1054673055 1558 dbSNP
rs892069501 1559 dbSNP
rs1165326628 1565 dbSNP
rs1474635318 1568 dbSNP
rs1390041552 1581 dbSNP
rs1022320923 1582 dbSNP
rs1260114678 1585 dbSNP
rs1316115997 1599 dbSNP
rs1195498550 1602 dbSNP
rs1290848817 1606 dbSNP
rs144878138 1607 dbSNP
rs879168498 1608 dbSNP
rs754959534 1609 dbSNP
rs1046174166 1624 dbSNP
rs1301401038 1631 dbSNP
rs565654299 1633 dbSNP
rs1478448797 1634 dbSNP
rs1196418850 1636 dbSNP
rs928024773 1638 dbSNP
rs1408564759 1650 dbSNP
rs1464628237 1651 dbSNP
rs1163539199 1656 dbSNP
rs531447682 1658 dbSNP
rs907266065 1671 dbSNP
rs1392423047 1687 dbSNP
rs539487685 1696 dbSNP
rs886057521 1697 dbSNP
rs894946908 1708 dbSNP
rs1179292893 1709 dbSNP
rs879568905 1730 dbSNP
rs1482603055 1731 dbSNP
rs1252319416 1736 dbSNP
rs1340856829 1744 dbSNP
rs1345579400 1747 dbSNP
rs1277841279 1748 dbSNP
rs192733770 1753 dbSNP
rs576413692 1755 dbSNP
rs886057522 1763 dbSNP
rs1345881706 1764 dbSNP
rs886057523 1766 dbSNP
rs1037562543 1767 dbSNP
rs1175990788 1767 dbSNP
rs1491407298 1767 dbSNP
rs369394760 1767 dbSNP
rs371229000 1767 dbSNP
rs531996586 1767 dbSNP
rs563211677 1767 dbSNP
rs1491454262 1768 dbSNP
rs1401815352 1769 dbSNP
rs994633579 1770 dbSNP
rs1276205529 1773 dbSNP
rs1338603943 1784 dbSNP
rs139928 1785 dbSNP
rs1472086199 1785 dbSNP
rs1427156413 1786 dbSNP
rs62237043 1787 dbSNP
rs1284787459 1791 dbSNP
rs1358758825 1794 dbSNP
rs1484577226 1798 dbSNP
rs886057524 1799 dbSNP
rs1210820182 1800 dbSNP
rs1443047427 1803 dbSNP
rs886057525 1803 dbSNP
rs1280886894 1805 dbSNP
rs371949732 1807 dbSNP
rs1289225684 1808 dbSNP
rs1291542430 1814 dbSNP
rs1488803169 1820 dbSNP
rs1230556817 1823 dbSNP
rs767417354 1824 dbSNP
rs1302771265 1828 dbSNP
rs1449453738 1829 dbSNP
rs950650459 1831 dbSNP
rs983124957 1833 dbSNP
rs543596948 1834 dbSNP
rs1187641307 1837 dbSNP
rs200835214 1838 dbSNP
rs1369629462 1845 dbSNP
rs890095197 1850 dbSNP
rs1471617353 1852 dbSNP
rs965822916 1855 dbSNP
rs1412856787 1860 dbSNP
rs1182354182 1861 dbSNP
rs974934180 1862 dbSNP
rs1240318779 1867 dbSNP
rs921711526 1874 dbSNP
rs555560884 1877 dbSNP
rs990328447 1883 dbSNP
rs1268992040 1888 dbSNP
rs892746004 1889 dbSNP
rs1421275066 1893 dbSNP
rs553283756 1901 dbSNP
rs747991486 1907 dbSNP
rs1312518484 1916 dbSNP
rs1229270164 1919 dbSNP
rs574807458 1921 dbSNP
rs1022451280 1922 dbSNP
rs1045729219 1938 dbSNP
rs1433698966 1939 dbSNP
rs528130695 1948 dbSNP
rs1388822429 1956 dbSNP
rs184334715 1965 dbSNP
rs1459594918 1969 dbSNP
rs1348964819 1976 dbSNP
rs1165168904 1983 dbSNP
rs560411781 1986 dbSNP
rs980837871 1987 dbSNP
rs1342305137 1988 dbSNP
rs1035521302 1997 dbSNP
rs188197558 1998 dbSNP
rs1056244279 2002 dbSNP
rs545832220 2007 dbSNP
rs960710015 2008 dbSNP
rs564396179 2012 dbSNP
rs1354937712 2015 dbSNP
rs549873624 2018 dbSNP
rs531884406 2021 dbSNP
rs1323943163 2041 dbSNP
rs779260997 2042 dbSNP
rs886057526 2043 dbSNP
rs1242756477 2044 dbSNP
rs1228367659 2051 dbSNP
rs550077241 2053 dbSNP
rs1299116139 2055 dbSNP
rs1175037244 2063 dbSNP
rs568653371 2064 dbSNP
rs1293766592 2065 dbSNP
rs886342250 2068 dbSNP
rs180994655 2069 dbSNP
rs1167850145 2070 dbSNP
rs1018605982 2075 dbSNP
rs1430386180 2080 dbSNP
rs1391968092 2081 dbSNP
rs966066316 2096 dbSNP
rs1440176362 2097 dbSNP
rs1182661271 2099 dbSNP
rs931816567 2100 dbSNP
rs1250130763 2110 dbSNP
rs995873305 2111 dbSNP
rs1204927055 2117 dbSNP
rs1050154359 2121 dbSNP
rs1028717187 2123 dbSNP
rs911651071 2131 dbSNP
rs1156632304 2138 dbSNP
rs746166619 2146 dbSNP
rs184879323 2149 dbSNP
rs1311167246 2156 dbSNP
rs1301532967 2160 dbSNP
rs1388191156 2161 dbSNP
rs1348371289 2163 dbSNP
rs1307126416 2168 dbSNP
rs547446523 2177 dbSNP
rs1372255450 2179 dbSNP
rs990297337 2179 dbSNP
rs1466519758 2187 dbSNP
rs1170754227 2189 dbSNP
rs774533007 2195 dbSNP
rs139822577 2199 dbSNP
rs573224246 2215 dbSNP
rs572348485 2217 dbSNP
rs878875609 2226 dbSNP
rs1377182854 2231 dbSNP
rs1177034706 2237 dbSNP
rs1435082480 2244 dbSNP
rs539399304 2249 dbSNP
rs1181829429 2265 dbSNP
rs913441450 2269 dbSNP
rs967647866 2282 dbSNP
rs1199310213 2285 dbSNP
rs1482624869 2298 dbSNP
rs982065883 2299 dbSNP
rs1256124996 2301 dbSNP
rs1043956962 2303 dbSNP
rs1326588833 2306 dbSNP
rs905323778 2309 dbSNP
rs1228715747 2312 dbSNP
rs143228060 2317 dbSNP
rs1035086610 2319 dbSNP
rs961098448 2321 dbSNP
rs771976752 2322 dbSNP
rs1402851026 2323 dbSNP
rs1303460934 2328 dbSNP
rs1004202984 2331 dbSNP
rs1158784807 2337 dbSNP
rs569939536 2342 dbSNP
rs537360896 2355 dbSNP
rs1473122073 2361 dbSNP
rs1055814141 2363 dbSNP
rs1423688395 2365 dbSNP
rs919998138 2368 dbSNP
rs376646029 2373 dbSNP
rs1234667492 2399 dbSNP
rs1463169141 2403 dbSNP
rs1048881302 2405 dbSNP
rs189640184 2407 dbSNP
rs775651940 2408 dbSNP
rs1282164297 2417 dbSNP
rs973284128 2435 dbSNP
rs1342345295 2446 dbSNP
rs1004728649 2452 dbSNP
rs920522410 2453 dbSNP
rs1238196041 2456 dbSNP
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rs1040656921 2466 dbSNP
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rs1386635582 2483 dbSNP
rs1305445823 2495 dbSNP
rs953217080 2497 dbSNP
rs1387441050 2506 dbSNP
rs1161780629 2507 dbSNP
rs1457723884 2515 dbSNP
rs1369492901 2517 dbSNP
rs901770690 2518 dbSNP
rs986395040 2522 dbSNP
rs996230696 2524 dbSNP
rs1447124503 2528 dbSNP
rs1246935526 2536 dbSNP
rs747423050 2537 dbSNP
rs1465943321 2542 dbSNP
rs957104291 2548 dbSNP
rs1208962325 2549 dbSNP
rs535637957 2550 dbSNP
rs1267144465 2554 dbSNP
rs913528567 2556 dbSNP
rs1296901723 2560 dbSNP
rs1435942198 2573 dbSNP
rs946391679 2587 dbSNP
rs1321844885 2590 dbSNP
rs1386548765 2601 dbSNP
rs34721391 2601 dbSNP
rs1391985510 2602 dbSNP
rs1433530652 2608 dbSNP
rs1178213784 2609 dbSNP
rs144498602 2612 dbSNP
rs967910178 2616 dbSNP
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rs981653100 2619 dbSNP
rs928853651 2624 dbSNP
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rs886057527 2628 dbSNP
rs2899341 2630 dbSNP
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rs777162032 2637 dbSNP
rs991431890 2645 dbSNP
rs1004260425 2647 dbSNP
rs554227485 2650 dbSNP
rs1229160106 2652 dbSNP
rs962674836 2655 dbSNP
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rs1331926309 2666 dbSNP
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rs1047104082 2676 dbSNP
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rs953450154 2683 dbSNP
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rs1040234426 2710 dbSNP
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rs1303778056 2714 dbSNP
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rs1422499432 2729 dbSNP
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rs1350330079 2762 dbSNP
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rs181614337 2763 dbSNP
rs1357948226 2764 dbSNP
rs886057531 2769 dbSNP
rs1007161068 2776 dbSNP
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rs886057532 2780 dbSNP
rs1472139489 2781 dbSNP
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rs1461876416 2800 dbSNP
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rs979112771 2993 dbSNP
rs926321173 2997 dbSNP
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rs8142521 3004 dbSNP
rs549259891 3008 dbSNP
rs908606460 3009 dbSNP
rs1287804601 3022 dbSNP
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rs12168140 3138 dbSNP
rs902914013 3140 dbSNP
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rs894611845 3169 dbSNP
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rs1177509336 3183 dbSNP
rs1033448236 3187 dbSNP
rs1013043091 3195 dbSNP
rs1383610090 3196 dbSNP
rs1027171352 3198 dbSNP
rs1420167946 3212 dbSNP
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rs1310559114 3260 dbSNP
rs920050016 3263 dbSNP
rs931510031 3265 dbSNP
rs1471052179 3269 dbSNP
rs574254225 3270 dbSNP
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rs1449564300 3288 dbSNP
rs886057537 3299 dbSNP
rs911329885 3306 dbSNP
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rs1443444809 3315 dbSNP
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rs76142829 3318 dbSNP
rs76875277 3319 dbSNP
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rs1056846616 3384 dbSNP
rs894248454 3385 dbSNP
rs1363224725 3391 dbSNP
rs1000724304 3393 dbSNP
rs1033828017 3395 dbSNP
rs181358509 3402 dbSNP
rs115221268 3412 dbSNP
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rs888694566 3432 dbSNP
rs1024683827 3436 dbSNP
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rs961032254 3457 dbSNP
rs972942914 3472 dbSNP
rs1004453068 3475 dbSNP
rs548708662 3482 dbSNP
rs1016265412 3485 dbSNP
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rs1293880552 3521 dbSNP
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rs1340208806 3544 dbSNP
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rs1328445372 3567 dbSNP
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rs1177191976 3583 dbSNP
rs954137875 3587 dbSNP
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rs577259956 3601 dbSNP
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rs914448506 3624 dbSNP
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rs1404671369 3650 dbSNP
rs1270958913 3661 dbSNP
rs1361685062 3661 dbSNP
rs886057539 3661 dbSNP
rs913196041 3661 dbSNP
rs886057538 3674 dbSNP
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rs1332932045 3675 dbSNP
rs1341651228 3676 dbSNP
rs1333825498 3677 dbSNP
rs1381370275 3677 dbSNP
rs78044566 3678 dbSNP
rs1275149780 3679 dbSNP
rs1042261766 3681 dbSNP
rs1346584944 3685 dbSNP
rs1285726196 3687 dbSNP
rs199786983 3687 dbSNP
rs1261369909 3690 dbSNP
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rs150218150 3691 dbSNP
rs200737218 3691 dbSNP
rs1175354323 3692 dbSNP
rs1322872361 3693 dbSNP
rs1199559941 3697 dbSNP
rs1470092866 3697 dbSNP
rs1275361954 3698 dbSNP
rs1233390125 3699 dbSNP
rs376352212 3699 dbSNP
rs377240194 3699 dbSNP
rs1436498611 3700 dbSNP
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rs1181557276 3702 dbSNP
rs1001092998 3703 dbSNP
rs1054999309 3703 dbSNP
rs534631377 3704 dbSNP
rs1013301069 3705 dbSNP
rs1197859212 3709 dbSNP
rs1231379840 3714 dbSNP
rs1428054456 3715 dbSNP
rs1280706495 3719 dbSNP
rs1443740561 3722 dbSNP
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rs1024735675 3727 dbSNP
rs1452847192 3730 dbSNP
rs1393881505 3731 dbSNP
rs1156600597 3738 dbSNP
rs1399908577 3742 dbSNP
rs1408947439 3749 dbSNP
rs1323987804 3756 dbSNP
rs924527994 3757 dbSNP
rs1403070512 3758 dbSNP
rs1183099963 3770 dbSNP
rs1461892567 3773 dbSNP
rs896799094 3776 dbSNP
rs993855218 3777 dbSNP
rs549275357 3788 dbSNP
rs1057216125 3789 dbSNP
rs1285543343 3798 dbSNP
rs1027633075 3800 dbSNP
rs186696431 3806 dbSNP
rs1452729997 3812 dbSNP
rs768773093 3823 dbSNP
rs1318200004 3825 dbSNP
rs1429762583 3838 dbSNP
rs1271947280 3840 dbSNP
rs886057540 3841 dbSNP
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rs1291087840 3846 dbSNP
rs753804308 3847 dbSNP
rs1445379696 3850 dbSNP
rs1018484808 3856 dbSNP
rs1490937793 3857 dbSNP
rs1485736002 3861 dbSNP
rs1243004583 3867 dbSNP
rs1218418264 3881 dbSNP
rs1489983087 3885 dbSNP
rs888578843 3890 dbSNP
rs965931397 3908 dbSNP
rs1004791052 3911 dbSNP
rs1361058489 3916 dbSNP
rs571092545 3950 dbSNP
rs138848856 3956 dbSNP
rs913336885 3959 dbSNP
rs1037261895 3974 dbSNP
rs901435485 3975 dbSNP
rs998183140 3983 dbSNP
rs748722567 3986 dbSNP
rs978760236 3991 dbSNP
rs1194708229 3994 dbSNP
rs1367586407 4003 dbSNP
rs1168449751 4019 dbSNP
rs1028766382 4022 dbSNP
rs1370791821 4024 dbSNP
rs1428097077 4025 dbSNP
rs1474893649 4027 dbSNP
rs954108536 4028 dbSNP
rs563049726 4038 dbSNP
rs1022397291 4043 dbSNP
rs1223936209 4048 dbSNP
rs1490690979 4055 dbSNP
rs1422499912 4057 dbSNP
rs1249070928 4060 dbSNP
rs1203215975 4061 dbSNP
rs553266845 4064 dbSNP
rs977678374 4065 dbSNP
rs770079471 4070 dbSNP
rs1344686258 4075 dbSNP
rs1055453185 4085 dbSNP
rs924525428 4091 dbSNP
rs1401715928 4096 dbSNP
rs773642448 4098 dbSNP
rs557826877 4104 dbSNP
rs960260083 4110 dbSNP
rs1296455287 4116 dbSNP
rs949210587 4126 dbSNP
rs992502575 4129 dbSNP
rs915609818 4131 dbSNP
rs543502816 4132 dbSNP
rs1324731033 4135 dbSNP
rs1429085982 4141 dbSNP
rs546404938 4141 dbSNP
rs747430264 4141 dbSNP
rs886057541 4141 dbSNP
rs1176112412 4147 dbSNP
rs1227035536 4153 dbSNP
rs74567372 4153 dbSNP
rs1284992958 4154 dbSNP
rs1252673594 4156 dbSNP
rs1362126400 4157 dbSNP
rs1244245399 4159 dbSNP
rs1291419529 4167 dbSNP
rs993822638 4170 dbSNP
rs1225116653 4171 dbSNP
rs1488915111 4185 dbSNP
rs1026687370 4187 dbSNP
rs1306270514 4188 dbSNP
rs888693742 4199 dbSNP
rs1374196893 4202 dbSNP
rs983794259 4207 dbSNP
rs1333592113 4210 dbSNP
rs1450658967 4215 dbSNP
rs189664696 4217 dbSNP
rs940173686 4223 dbSNP
rs182343178 4225 dbSNP
rs574241355 4228 dbSNP
rs901405940 4229 dbSNP
rs1018951005 4232 dbSNP
rs1244591421 4240 dbSNP
rs934276700 4243 dbSNP
rs1419134036 4248 dbSNP
rs965494165 4250 dbSNP
rs1049751015 4252 dbSNP
rs886057542 4261 dbSNP
rs762467508 4264 dbSNP
rs1380638632 4266 dbSNP
rs1010916041 4280 dbSNP
rs1156722623 4282 dbSNP
rs1258811315 4282 dbSNP
rs1382960976 4285 dbSNP
rs976911981 4287 dbSNP
rs1381720394 4291 dbSNP
rs1022366364 4298 dbSNP
rs1334845291 4307 dbSNP
rs1385284451 4313 dbSNP
rs1311470105 4316 dbSNP
rs186064795 4320 dbSNP
rs1382291105 4321 dbSNP
rs1314826799 4330 dbSNP
rs1337715618 4341 dbSNP
rs1398121683 4345 dbSNP
rs902612358 4348 dbSNP
rs998688424 4349 dbSNP
rs925936177 4355 dbSNP
rs1031959103 4362 dbSNP
rs9623286 4363 dbSNP
rs916505695 4368 dbSNP
rs1189240616 4376 dbSNP
rs1259472442 4377 dbSNP
rs578217583 4384 dbSNP
rs1187339140 4395 dbSNP
rs1260718972 4396 dbSNP
rs1205534083 4411 dbSNP
rs1200537768 4415 dbSNP
rs542505534 4422 dbSNP
rs1486773803 4423 dbSNP
rs773919668 4424 dbSNP
rs1459727877 4433 dbSNP
rs993119035 4433 dbSNP
rs1022838526 4434 dbSNP
rs1315965514 4436 dbSNP
rs969671504 4447 dbSNP
rs759099949 4454 dbSNP
rs983763193 4455 dbSNP
rs1295214846 4457 dbSNP
rs1383143776 4462 dbSNP
rs1362995759 4471 dbSNP
rs929752587 4472 dbSNP
rs1423423927 4474 dbSNP
rs909622512 4475 dbSNP
rs939789070 4476 dbSNP
rs545660516 4477 dbSNP
rs1474199942 4485 dbSNP
rs1372158823 4486 dbSNP
rs1193614345 4491 dbSNP
rs1048622439 4495 dbSNP
rs11557845 4518 dbSNP
rs190920816 4531 dbSNP
rs1363166056 4533 dbSNP
rs1221718855 4536 dbSNP
rs934184463 4545 dbSNP
rs1292534960 4551 dbSNP
rs1049967469 4561 dbSNP
rs9611438 4562 dbSNP
rs1251028599 4563 dbSNP
rs1228614184 4567 dbSNP
rs901462050 4571 dbSNP
rs946672860 4576 dbSNP
rs9619920 4587 dbSNP
rs778774318 4589 dbSNP
rs902580143 4591 dbSNP
rs1378187884 4600 dbSNP
rs1346732402 4602 dbSNP
rs1393497052 4604 dbSNP
rs1324872442 4607 dbSNP
rs560735914 4615 dbSNP
rs1035116153 4621 dbSNP
rs1335699834 4624 dbSNP
rs1234555977 4631 dbSNP
rs1168177097 4638 dbSNP
rs183511610 4646 dbSNP
rs1014059742 4649 dbSNP
rs1320772256 4651 dbSNP
rs1248392333 4652 dbSNP
rs1201079993 4654 dbSNP
rs1022807551 4663 dbSNP
rs969975865 4672 dbSNP
rs1000249714 4690 dbSNP
rs1250049282 4694 dbSNP
rs983733765 4700 dbSNP
rs188458090 4702 dbSNP
rs5758133 4703 dbSNP
rs1223286696 4706 dbSNP
rs916490398 4712 dbSNP
rs972860690 4713 dbSNP
rs1439353210 4731 dbSNP
rs1193875290 4738 dbSNP
rs1249502050 4744 dbSNP
rs1433728596 4746 dbSNP
rs1328970658 4770 dbSNP
rs546466102 4775 dbSNP
rs970669075 4778 dbSNP
rs1403440356 4779 dbSNP
rs1201455929 4791 dbSNP
rs981940749 4801 dbSNP
rs1431600344 4808 dbSNP
rs571254885 4815 dbSNP
rs1468649256 4818 dbSNP
rs1232327603 4819 dbSNP
rs532166381 4821 dbSNP
rs1479488112 4829 dbSNP
rs1176062305 4832 dbSNP
rs1459206581 4834 dbSNP
rs1241546909 4844 dbSNP
rs1203429531 4850 dbSNP
rs955706573 4852 dbSNP
rs1443394745 4853 dbSNP
rs1281320780 4856 dbSNP
rs1222514477 4858 dbSNP
rs5751010 4859 dbSNP
rs1350625720 4865 dbSNP
rs554851983 4873 dbSNP
rs1241696132 4878 dbSNP
rs985640681 4885 dbSNP
rs911466023 4888 dbSNP
rs946977469 4889 dbSNP
rs1043736140 4893 dbSNP
rs923900948 4898 dbSNP
rs1453065500 4899 dbSNP
rs550366125 4903 dbSNP
rs1400003424 4907 dbSNP
rs1406147598 4917 dbSNP
rs570107699 4927 dbSNP
rs1159268277 4933 dbSNP
rs909646807 4940 dbSNP
rs1383585292 4946 dbSNP
rs942367491 4949 dbSNP
rs1056927116 4952 dbSNP
rs537166229 4953 dbSNP
rs1014028769 4964 dbSNP
rs543551986 4974 dbSNP
rs1278218369 4983 dbSNP
rs146033951 4991 dbSNP
rs1218163164 4994 dbSNP
rs905785614 4996 dbSNP
rs1224735808 5000 dbSNP
rs1356699693 5007 dbSNP
rs1041958619 5015 dbSNP
rs1228491483 5018 dbSNP
rs1380931572 5019 dbSNP
rs903330033 5024 dbSNP
rs138505458 5025 dbSNP
rs1016860973 5042 dbSNP
rs1300005854 5051 dbSNP
rs1488670928 5055 dbSNP
rs959074106 5059 dbSNP
rs961295024 5063 dbSNP
rs1266677107 5066 dbSNP
rs993867282 5067 dbSNP
rs1406098753 5071 dbSNP
rs1029799494 5072 dbSNP
rs1475328247 5074 dbSNP
rs535066046 5074 dbSNP
rs985611041 5081 dbSNP
rs981992986 5083 dbSNP
rs1490010053 5085 dbSNP
rs1290349201 5090 dbSNP
rs911434810 5096 dbSNP
rs886057543 5097 dbSNP
rs1270519776 5103 dbSNP
rs1198807029 5107 dbSNP
rs984388780 5109 dbSNP
rs1402981656 5115 dbSNP
rs1292954629 5116 dbSNP
rs543735401 5116 dbSNP
rs1458524602 5123 dbSNP
rs1430561955 5133 dbSNP
rs942481850 5140 dbSNP
rs968213539 5141 dbSNP
rs1409731604 5144 dbSNP
rs1424728954 5150 dbSNP
rs1425683614 5153 dbSNP
rs1039430069 5154 dbSNP
rs1268817296 5157 dbSNP
rs922235722 5184 dbSNP
rs780300489 5191 dbSNP
rs924233973 5194 dbSNP
rs553696963 5195 dbSNP
rs903467054 5199 dbSNP
rs936172351 5206 dbSNP
rs1221474062 5222 dbSNP
rs1055068860 5227 dbSNP
rs1301972666 5229 dbSNP
rs894559353 5233 dbSNP
rs1387391504 5235 dbSNP
rs755046161 5239 dbSNP
rs1296549629 5252 dbSNP
rs1446276178 5259 dbSNP
rs11557846 5262 dbSNP
rs1401313969 5263 dbSNP
rs578253119 5272 dbSNP
rs1333720370 5273 dbSNP
rs1468624744 5276 dbSNP
rs1429194849 5281 dbSNP
rs1177477592 5283 dbSNP
rs1435445633 5298 dbSNP
rs1363409508 5302 dbSNP
rs1013379114 5308 dbSNP
rs1405110487 5308 dbSNP
rs1056495454 5309 dbSNP
rs1239678997 5310 dbSNP
rs766156429 5318 dbSNP
rs1460733761 5321 dbSNP
rs545570385 5326 dbSNP
rs948178860 5327 dbSNP
rs141571227 5328 dbSNP
rs1315091268 5330 dbSNP
rs193181659 5336 dbSNP
rs1005345161 5337 dbSNP
rs747133827 5343 dbSNP
rs1358670049 5348 dbSNP
rs1333697767 5362 dbSNP
rs1038670685 5372 dbSNP
rs542341558 5373 dbSNP
rs1217197092 5378 dbSNP
rs1242826955 5380 dbSNP
rs1467968145 5381 dbSNP
rs1343962651 5384 dbSNP
rs1486882484 5407 dbSNP
rs1185069753 5409 dbSNP
rs561065540 5410 dbSNP
rs886057544 5411 dbSNP
rs1165891642 5417 dbSNP
rs1439842562 5424 dbSNP
rs1381742092 5433 dbSNP
rs1289114665 5437 dbSNP
rs528070926 5439 dbSNP
rs114897404 5440 dbSNP
rs377574021 5445 dbSNP
rs150740494 5446 dbSNP
rs1484821735 5450 dbSNP
rs955108919 5458 dbSNP
rs1260134010 5463 dbSNP
rs1215980636 5469 dbSNP
rs963918085 5477 dbSNP
rs1006608647 5482 dbSNP
rs1018036784 5485 dbSNP
rs968184232 5496 dbSNP
rs1428030673 5499 dbSNP
rs886057545 5509 dbSNP
rs979636158 5510 dbSNP
rs1031657359 5513 dbSNP
rs1360479613 5518 dbSNP
rs1298159847 5524 dbSNP
rs1419747096 5526 dbSNP
rs182919606 5528 dbSNP
rs957000568 5529 dbSNP
rs187319928 5541 dbSNP
rs922371648 5543 dbSNP
rs933637545 5545 dbSNP
rs191415641 5548 dbSNP
rs1260923120 5558 dbSNP
rs948064256 5568 dbSNP
rs1194366462 5569 dbSNP
rs1438224028 5583 dbSNP
rs924883263 5590 dbSNP
rs1220368488 5602 dbSNP
rs1381741486 5606 dbSNP
rs1224328822 5611 dbSNP
rs529930352 5615 dbSNP
rs1054719240 5616 dbSNP
rs980784705 5628 dbSNP
rs894602544 5630 dbSNP
rs948881116 5631 dbSNP
rs886057546 5632 dbSNP
rs909320068 5634 dbSNP
rs1045825045 5635 dbSNP
rs1314989015 5636 dbSNP
rs1385793992 5638 dbSNP
rs139106585 5640 dbSNP
rs530025506 5642 dbSNP
rs115817476 5644 dbSNP
rs886057547 5650 dbSNP
rs1241732200 5651 dbSNP
rs1171128499 5652 dbSNP
rs1444379083 5656 dbSNP
rs1266756880 5658 dbSNP
rs1451145552 5674 dbSNP
rs993488172 5692 dbSNP
rs749637366 5693 dbSNP
rs1026357053 5694 dbSNP
rs781709583 5697 dbSNP
rs534978912 5701 dbSNP
rs553403809 5702 dbSNP
rs897047689 5703 dbSNP
rs1320611510 5707 dbSNP
rs1157759521 5708 dbSNP
rs1016864241 5710 dbSNP
rs964194724 5713 dbSNP
rs929950430 5717 dbSNP
rs1470774653 5730 dbSNP
rs1324982179 5733 dbSNP
rs1334270367 5734 dbSNP
rs1399109072 5737 dbSNP
rs1331773252 5738 dbSNP
rs771253606 5743 dbSNP
rs571938833 5744 dbSNP
rs1006577980 5745 dbSNP
rs1442669732 5755 dbSNP
rs1281015847 5763 dbSNP
rs1478327176 5763 dbSNP
rs1378232053 5764 dbSNP
rs1201101605 5767 dbSNP
rs1371123878 5776 dbSNP
rs1456567627 5778 dbSNP
rs1018006071 5782 dbSNP
rs1287859203 5794 dbSNP
rs1029352092 5801 dbSNP
rs1277095284 5807 dbSNP
rs903632704 5811 dbSNP
rs774044043 5812 dbSNP
rs1296669030 5814 dbSNP
rs1346367694 5816 dbSNP
rs1276047742 5820 dbSNP
rs1031207424 5827 dbSNP
rs539354670 5842 dbSNP
rs759264208 5849 dbSNP
rs1448685355 5852 dbSNP
rs557668426 5854 dbSNP
rs977056528 5870 dbSNP
rs1414907400 5886 dbSNP
rs17002244 5890 dbSNP
rs924234503 5896 dbSNP
rs1174381715 5901 dbSNP
rs1491272162 5903 dbSNP
rs61410755 5903 dbSNP
rs76218458 5903 dbSNP
rs886057548 5903 dbSNP
rs916184566 5903 dbSNP
rs935690552 5903 dbSNP
rs948848385 5903 dbSNP
rs1491266341 5904 dbSNP
rs80229420 5904 dbSNP
rs1213784047 5905 dbSNP
rs1025184203 5906 dbSNP
rs1205675677 5908 dbSNP
rs1241813453 5915 dbSNP
rs575725433 5916 dbSNP
rs1234908066 5917 dbSNP
rs980752373 5921 dbSNP
rs1177105000 5924 dbSNP
rs1429448943 5928 dbSNP
rs1481129876 5929 dbSNP
rs1342195404 5950 dbSNP
rs112952258 5964 dbSNP
rs942152793 5968 dbSNP
rs974312572 5969 dbSNP
rs1159361477 5970 dbSNP
rs1421684607 5977 dbSNP
rs879112604 5985 dbSNP
rs771646974 5994 dbSNP
rs554357484 6000 dbSNP
rs1050997893 6001 dbSNP
rs1352518214 6003 dbSNP
rs572902747 6017 dbSNP
rs746377621 6018 dbSNP
rs1192063121 6021 dbSNP
rs1488266174 6024 dbSNP
rs891058674 6042 dbSNP
rs1346299977 6048 dbSNP
rs1225430228 6049 dbSNP
rs1319542238 6054 dbSNP
rs73412774 6056 dbSNP
rs955212830 6063 dbSNP
rs1344605949 6070 dbSNP
rs998529327 6071 dbSNP
rs1276098171 6073 dbSNP
rs1039410146 6074 dbSNP
rs1399281368 6076 dbSNP
rs1341060362 6081 dbSNP
rs1215343074 6095 dbSNP
rs183787483 6106 dbSNP
rs1436410092 6108 dbSNP
rs189310756 6110 dbSNP
rs1348327548 6120 dbSNP
rs957239435 6121 dbSNP
rs1490967792 6122 dbSNP
rs1406191137 6125 dbSNP
rs1000654462 6126 dbSNP
rs1168985404 6131 dbSNP
rs1477745900 6141 dbSNP
rs1031176500 6144 dbSNP
rs886057549 6165 dbSNP
rs1220875221 6171 dbSNP
rs193116004 6179 dbSNP
rs149909864 6180 dbSNP
rs1169266687 6181 dbSNP
rs1417194285 6183 dbSNP
rs529842024 6195 dbSNP
rs1025153309 6199 dbSNP
rs9917 6202 dbSNP
rs1318506055 6205 dbSNP
rs561181644 6207 dbSNP
rs528615246 6209 dbSNP
rs1365516833 6212 dbSNP
rs1402970694 6214 dbSNP
rs1293044551 6226 dbSNP
rs546979058 6232 dbSNP
rs1301404762 6235 dbSNP
rs753768301 6238 dbSNP
rs775934164 6240 dbSNP
rs1431812641 6243 dbSNP
rs1272140102 6249 dbSNP
rs761655941 6250 dbSNP
rs1039066895 6256 dbSNP
rs1173519785 6263 dbSNP
rs899759597 6270 dbSNP
rs1423809000 6296 dbSNP
rs11557844 6297 dbSNP
rs996681710 6300 dbSNP
rs765009303 6301 dbSNP
rs951215171 6303 dbSNP
rs1236050527 6306 dbSNP
rs1292901415 6312 dbSNP
rs986659624 6314 dbSNP
rs763175539 6315 dbSNP
rs912463625 6341 dbSNP
rs1320431886 6343 dbSNP
rs1207879627 6347 dbSNP
rs1311534603 6349 dbSNP
rs1219946087 6355 dbSNP
rs1300602906 6355 dbSNP
rs942631539 6356 dbSNP
rs1307403139 6379 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cgaggucagagcugcaAGGGCCCc 5'
                          ||||||| 
Target 5' --------------ucUCCCGGGu 3'
 		1 - 10
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions Prostate Tissue
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRX1760638. RNA binding protein: AGO2. Condition:AGO-CLIP-PC3-miR148 ...

- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.).

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cgAGGUCAGAGCUGCAAGGGCCCc 5'
            | ||  ||| |:  ||||||| 
Target 5' acUGCAACCUCCAU-CUCCCGGGu 3'
 		10 - 32
Article - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al.
- Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000357137.4 | 3UTR | UCUCCCGGGUUCAGGCAAUUCUUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
228 hsa-miR-1247-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT107246 PTGES2 prostaglandin E synthase 2 2 2
MIRT118004 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 6
MIRT345983 BIRC5 baculoviral IAP repeat containing 5 2 4
MIRT369967 ZNF264 zinc finger protein 264 2 2
MIRT451350 ZNF573 zinc finger protein 573 2 4
MIRT451367 UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI 2 2
MIRT451450 ZNF556 zinc finger protein 556 2 4
MIRT451766 ZNF611 zinc finger protein 611 2 6
MIRT452065 ZNF585B zinc finger protein 585B 2 8
MIRT452346 TG thyroglobulin 2 2
MIRT452519 TFDP2 transcription factor Dp-2 2 6
MIRT452631 FAM162A family with sequence similarity 162 member A 2 2
MIRT452896 PSD4 pleckstrin and Sec7 domain containing 4 2 4
MIRT453263 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453567 RDH13 retinol dehydrogenase 13 2 2
MIRT453911 GABRR2 gamma-aminobutyric acid type A receptor rho2 subunit 2 4
MIRT454576 NT5DC3 5'-nucleotidase domain containing 3 2 2
MIRT454859 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455094 NMNAT1 nicotinamide nucleotide adenylyltransferase 1 2 2
MIRT455790 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT455932 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT456213 LIX1L limb and CNS expressed 1 like 2 4
MIRT456238 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 6
MIRT456279 HRNR hornerin 2 2
MIRT456665 TIFA TRAF interacting protein with forkhead associated domain 2 2
MIRT457088 XPNPEP3 X-prolyl aminopeptidase 3 2 2
MIRT457322 DUSP19 dual specificity phosphatase 19 2 2
MIRT457695 ZNF587 zinc finger protein 587 2 4
MIRT458160 LYRM4 LYR motif containing 4 2 6
MIRT458465 SNX22 sorting nexin 22 2 8
MIRT458504 MARVELD2 MARVEL domain containing 2 2 2
MIRT458514 GSG2 histone H3 associated protein kinase 2 10
MIRT458645 SGPP2 sphingosine-1-phosphate phosphatase 2 2 2
MIRT458823 ZNF843 zinc finger protein 843 2 4
MIRT459156 NARF nuclear prelamin A recognition factor 2 2
MIRT459182 HSPA6 heat shock protein family A (Hsp70) member 6 2 4
MIRT459374 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459552 BTD biotinidase 2 2
MIRT459756 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT459860 SVOP SV2 related protein 2 8
MIRT460020 DTX3L deltex E3 ubiquitin ligase 3L 2 6
MIRT460233 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT460275 SLC26A2 solute carrier family 26 member 2 2 2
MIRT460461 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460540 TM4SF5 transmembrane 4 L six family member 5 2 2
MIRT460551 IFNAR1 interferon alpha and beta receptor subunit 1 2 6
MIRT460978 STK17B serine/threonine kinase 17b 2 2
MIRT461421 CTSL2 cathepsin V 1 2
MIRT461960 C3 complement C3 2 4
MIRT462529 DHODH dihydroorotate dehydrogenase (quinone) 2 6
MIRT462864 CYP51A1 cytochrome P450 family 51 subfamily A member 1 2 2
MIRT462917 ZNRF3 zinc and ring finger 3 2 2
MIRT463022 ZNF70 zinc finger protein 70 2 2
MIRT463074 ZNF639 zinc finger protein 639 2 2
MIRT463130 ZNF451 zinc finger protein 451 2 4
MIRT463627 YY1 YY1 transcription factor 2 2
MIRT467015 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467127 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT468526 SERTAD2 SERTA domain containing 2 2 4
MIRT468584 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT469540 RBBP8 RB binding protein 8, endonuclease 2 2
MIRT469876 PURB purine rich element binding protein B 2 4
MIRT471577 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT472110 NME2 NME/NM23 nucleoside diphosphate kinase 2 2 2
MIRT472127 NME1-NME2 NME1-NME2 readthrough 2 2
MIRT472423 NCKAP1 NCK associated protein 1 2 2
MIRT472829 MTMR10 myotubularin related protein 10 2 4
MIRT473022 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT473408 MDM4 MDM4, p53 regulator 2 2
MIRT474122 LIPC lipase C, hepatic type 2 2
MIRT474927 KCTD20 potassium channel tetramerization domain containing 20 2 2
MIRT476807 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT478006 DNAL1 dynein axonemal light chain 1 2 2
MIRT479200 CLCN5 chloride voltage-gated channel 5 2 6
MIRT479671 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT479917 CCDC117 coiled-coil domain containing 117 2 6
MIRT479977 CARD10 caspase recruitment domain family member 10 2 2
MIRT480731 BPTF bromodomain PHD finger transcription factor 2 6
MIRT481100 B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 2 2
MIRT481160 AVL9 AVL9 cell migration associated 2 6
MIRT481393 ATG12 autophagy related 12 2 2
MIRT481433 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT482083 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT484667 HOXD3 homeobox D3 2 4
MIRT485940 ECSIT ECSIT signalling integrator 2 4
MIRT485950 BRSK1 BR serine/threonine kinase 1 2 2
MIRT487600 NKD2 naked cuticle homolog 2 2 4
MIRT487666 HPCAL1 hippocalcin like 1 2 4
MIRT489966 GNB2 G protein subunit beta 2 2 2
MIRT490332 ANK1 ankyrin 1 2 4
MIRT491314 LRFN1 leucine rich repeat and fibronectin type III domain containing 1 2 2
MIRT493193 MINK1 misshapen like kinase 1 2 4
MIRT493300 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT493816 FSCN1 fascin actin-bundling protein 1 2 2
MIRT496977 RPS6KA2 ribosomal protein S6 kinase A2 2 2
MIRT512229 ATXN3 ataxin 3 2 6
MIRT515141 ZNF799 zinc finger protein 799 2 4
MIRT516647 SMC5 structural maintenance of chromosomes 5 2 2
MIRT517952 TRIM59 tripartite motif containing 59 2 2
MIRT520971 SPPL2A signal peptide peptidase like 2A 2 4
MIRT521569 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT522918 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT532713 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT540809 SLC35F5 solute carrier family 35 member F5 2 2
MIRT550734 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551293 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 4
MIRT559740 ACOX1 acyl-CoA oxidase 1 2 2
MIRT564410 EMILIN2 elastin microfibril interfacer 2 2 2
MIRT565240 TRAF6 TNF receptor associated factor 6 2 2
MIRT568911 ATP6V1B1 ATPase H+ transporting V1 subunit B1 2 2
MIRT575232 Fut1 fucosyltransferase 1 2 2
MIRT576224 Srsf1 serine/arginine-rich splicing factor 1 2 2
MIRT607724 LIMS1 LIM zinc finger domain containing 1 2 2
MIRT608090 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT613920 POU3F1 POU class 3 homeobox 1 2 2
MIRT618520 SELPLG selectin P ligand 2 2
MIRT624703 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT624770 AKR1D1 aldo-keto reductase family 1 member D1 2 2
MIRT625720 SPI1 Spi-1 proto-oncogene 2 2
MIRT629975 MRPL36 mitochondrial ribosomal protein L36 2 2
MIRT631356 ZFP82 ZFP82 zinc finger protein 2 2
MIRT631426 CDNF cerebral dopamine neurotrophic factor 2 2
MIRT631665 NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 2 2
MIRT631735 SF3B1 splicing factor 3b subunit 1 2 2
MIRT632334 TCEANC2 transcription elongation factor A N-terminal and central domain containing 2 2 2
MIRT632419 SLC30A5 solute carrier family 30 member 5 2 2
MIRT632531 PSMB2 proteasome subunit beta 2 2 2
MIRT633264 LDLR low density lipoprotein receptor 2 2
MIRT634327 SLC43A2 solute carrier family 43 member 2 2 2
MIRT634753 CRCP CGRP receptor component 2 2
MIRT635412 KIAA1614 KIAA1614 2 2
MIRT636281 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT636291 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT640265 FANCA Fanconi anemia complementation group A 2 2
MIRT641738 TXNL1 thioredoxin like 1 2 2
MIRT643276 ZNF566 zinc finger protein 566 2 2
MIRT643528 ERAP2 endoplasmic reticulum aminopeptidase 2 2 2
MIRT643555 C11orf70 chromosome 11 open reading frame 70 2 2
MIRT647027 NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 2 2
MIRT647298 RBM43 RNA binding motif protein 43 2 2
MIRT648124 SEMA3E semaphorin 3E 2 4
MIRT648611 TPCN2 two pore segment channel 2 2 2
MIRT648717 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT649425 CDC14B cell division cycle 14B 2 2
MIRT650029 DSG3 desmoglein 3 2 2
MIRT650281 TAS2R5 taste 2 receptor member 5 2 2
MIRT650529 CCDC77 coiled-coil domain containing 77 2 2
MIRT654240 RNF115 ring finger protein 115 2 2
MIRT657032 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT658408 FAM212B family with sequence similarity 212 member B 2 2
MIRT659442 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT661080 FFAR2 free fatty acid receptor 2 2 2
MIRT661529 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT661876 PDLIM5 PDZ and LIM domain 5 2 2
MIRT662100 ZNF419 zinc finger protein 419 2 2
MIRT662136 ZC3H8 zinc finger CCCH-type containing 8 2 2
MIRT663638 HM13 histocompatibility minor 13 2 2
MIRT663703 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663847 TRIM72 tripartite motif containing 72 2 2
MIRT664769 MESDC2 mesoderm development LRP chaperone 2 2
MIRT665481 VSTM4 V-set and transmembrane domain containing 4 2 2
MIRT666533 RNF157 ring finger protein 157 2 2
MIRT668107 GK5 glycerol kinase 5 (putative) 2 2
MIRT668984 CKAP4 cytoskeleton associated protein 4 2 4
MIRT669742 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT671010 MOB4 MOB family member 4, phocein 2 2
MIRT671583 SPIRE2 spire type actin nucleation factor 2 2 2
MIRT673261 INO80 INO80 complex subunit 2 2
MIRT673533 ADRBK2 G protein-coupled receptor kinase 3 2 2
MIRT674714 FAM73A mitoguardin 1 2 2
MIRT675205 ZNF554 zinc finger protein 554 2 2
MIRT676488 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT676705 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT676851 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT676855 RAB3B RAB3B, member RAS oncogene family 2 2
MIRT676915 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT677000 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT677188 PDE12 phosphodiesterase 12 2 2
MIRT677473 SLC7A11 solute carrier family 7 member 11 2 2
MIRT677562 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT677779 FKTN fukutin 2 2
MIRT677896 DCP1A decapping mRNA 1A 2 2
MIRT677996 GATC glutamyl-tRNA amidotransferase subunit C 2 2
MIRT678239 HMGB1 high mobility group box 1 2 4
MIRT678313 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 2
MIRT678437 PDE4C phosphodiesterase 4C 2 2
MIRT678480 RNF222 ring finger protein 222 2 2
MIRT678591 ZNF91 zinc finger protein 91 2 2
MIRT678863 SLC7A14 solute carrier family 7 member 14 2 2
MIRT679241 LRP10 LDL receptor related protein 10 2 2
MIRT679388 WDR92 WD repeat domain 92 2 2
MIRT679501 ZNF106 zinc finger protein 106 2 2
MIRT679581 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT679827 TMEM106B transmembrane protein 106B 2 2
MIRT679842 GPR75 G protein-coupled receptor 75 2 2
MIRT679860 ZFP30 ZFP30 zinc finger protein 2 2
MIRT680733 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT680922 STX2 syntaxin 2 2 2
MIRT680953 CEP104 centrosomal protein 104 2 2
MIRT681053 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681967 TFCP2 transcription factor CP2 2 2
MIRT682010 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT682061 B4GALT7 beta-1,4-galactosyltransferase 7 2 4
MIRT682070 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT683356 SCARF1 scavenger receptor class F member 1 2 2
MIRT683699 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT684268 PRPF4 pre-mRNA processing factor 4 2 2
MIRT685500 MED16 mediator complex subunit 16 2 2
MIRT686876 SLC25A32 solute carrier family 25 member 32 2 2
MIRT690869 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691139 HJURP Holliday junction recognition protein 2 2
MIRT691195 NIF3L1 NGG1 interacting factor 3 like 1 2 2
MIRT691780 SLC24A4 solute carrier family 24 member 4 2 2
MIRT692901 MPL MPL proto-oncogene, thrombopoietin receptor 2 2
MIRT694551 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT695421 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT695956 FANCM Fanconi anemia complementation group M 2 2
MIRT696615 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT700682 PPAP2B phospholipid phosphatase 3 2 2
MIRT701215 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT702196 LRRC58 leucine rich repeat containing 58 2 2
MIRT702837 HOOK3 hook microtubule tethering protein 3 2 2
MIRT703652 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT705679 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706650 SMIM19 small integral membrane protein 19 2 2
MIRT711087 NEUROD2 neuronal differentiation 2 2 2
MIRT724961 PTK6 protein tyrosine kinase 6 2 2
MIRT735597 BCL6 B-cell CLL/lymphoma 6 1 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-1247 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-1247 Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780CIS)
hsa-mir-1247 Sorafenib 216239 NSC747971 approved sensitive High Hepatocellular Carcinoma tissue
hsa-mir-1247 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-mir-1247 Androstenedione 6128 NSC9563 resistant cell line (MCF-7)
hsa-mir-1247 Androstenedione+Anastrozole resistant cell line (MCF-7)
hsa-mir-1247 Androstenedione+Letrozole resistant cell line (MCF-7)
hsa-mir-1247 Fluorouracil 3385 NSC19893 approved resistant cell line (OE19)
hsa-mir-1247 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-mir-1247 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-1247-3p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (SW1990)
hsa-miR-1247-3p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (PC-9)
hsa-miR-1247-3p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer cell line (PC-9)
hsa-miR-1247-3p Yuanhuadine 6440572 resistant High Non-Small Cell Lung Cancer cell line (PC-9)
hsa-miR-1247-3p Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-1247-3p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-1247-3p Oxaliplatin 6857599 NSC266046 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-miR-1247-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-1247-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-1247-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-1247-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-1247-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-1247-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (100 ng/ml)
hsa-miR-1247-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-1247-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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