pre-miRNA Information
pre-miRNA hsa-mir-3689d-1   
Genomic Coordinates chr9: 134849609 - 134849682
Description Homo sapiens miR-3689d-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3689d-2   
Genomic Coordinates chr9: 134850277 - 134850356
Description Homo sapiens miR-3689d-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3689d
Sequence 2| GGGAGGUGUGAUCUCACACUCG |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551722268 8 dbSNP
rs143142996 8 dbSNP
rs1236297052 12 dbSNP
rs573148947 14 dbSNP
rs1210004979 14 dbSNP
rs1217460444 14 dbSNP
rs762590109 18 dbSNP
rs574332265 18 dbSNP
rs1164353021 21 dbSNP
rs963741171 21 dbSNP
rs1177416877 22 dbSNP
rs765777344 22 dbSNP
Putative Targets

Gene Information
Gene Symbol UNC119B   
Synonyms POC7B
Description unc-119 lipid binding chaperone B
Transcript NM_001080533   
Expression
Putative miRNA Targets on UNC119B
3'UTR of UNC119B
(miRNA target sites are highlighted)
>UNC119B|NM_001080533|3'UTR
   1 GTGCTGCAAGAGTAGATAGGGGAGGTGCTTTGCCGCGGCCACAAGATCCTGGCACACGGAGATGATCGAAGCTGCAGTTT
  81 GTCAACACACATCTGGAACCTGGCCCCAGGAAGCCAAGGCTGGGGTGGCAGTTTCCTGCGCGCCAAAGGAGCTGCCAAAC
 161 AGTGCTGTGTTTTCTTCCCCAGTATTTTTTCTTCCCTTTTTTTCCTGCCCCGTAGGTTGCAGAGGTACTATAGTAAAGTA
 241 AAAGGTTAGGATAAGGGTCCTGGAATCCAGATAAAAAAGTTTATTTTCCGTAGTTCTGGCTGCCTGTTGGTTGTCTTGAC
 321 GACCAGGCATAGCTGTGCCTGGTGAGAAGGCTCTGGCCAGGCCCACCAGCAGGTCAGCAGCTCTTAAGGTTCCTGGGTGC
 401 TGTGGGAAGCTGAAAGGTAGGCCTCTTCCAGGTAGCTCCTCCTCTCACCTCCGGCATTGCCATCAGCGCAGTCTGCCCTC
 481 GGTCTGTGTGAAGTCTTAAACCAACTGGAAGACACTTGAAAGGGTGGGGAGGGAGGGAGGTGCCAAGAGTGGAGGCACCA
 561 AGGAATGGGTGATGCTGCCAAGCTGAAGGGTCTGCTTTGTGGAGAGGCTGCTGCTCTGTCTGACTTCCAGGGTCTCAGCC
 641 AGCCCTCCTGGGAATAGACCAAGTTTTCAGCCTGGCAGTGCCTTCTGTTCCCATTTTGGAGGACAGACAAGCTTGCTCCA
 721 CATCTCCTGGCTCCTCCCTTCTGAGTCTCATGAAATAGAATGAGTCAGCTCTGCTCATGGAACAGTAGTATCTCTTGAGG
 801 CCAGAGCAGGTCTTGTATTTTGTTTTTTTATTTCCAGACTTCTTTCGGGGAGGTTTTATAAAATGACAGTGGTGTTCCCA
 881 GCATATGTGATATGTGGTTAGACTTCTGATAGTATCAGCTTCCAGGGGCTAATCTGGCTTATGTTGGGAGGATATGCTTA
 961 CGAATCAGCAGCAGCTTTCTAAAGGAGAGATTTGACTTTTCTCTGCACTGCACAGCCTGGAGGATTGGCTTTTGATGGGG
1041 ATTTGCCTCCGAAGCTCTTTGTACATTTCTTGTTTAGGAGGGTTTTCCTATCTACCTTTCTACTGAAGTAGTTTCTGGAA
1121 CTTTCCTGGTGGATCAGAGTTACGTAATGCAGTCTGAGCCTTCAGACTGCTAGTTAGAATTGTTTTAGGTGTTCAGAAAG
1201 GGCAAAATAGGCTGATGTGGCCTGTCAGAGTGATGTGTTCTCAAAAAAGTTCACTTGCACATCTGTGGGCTGCTTTTGTC
1281 CTCAGACCCTTAGTGGACAGACTCCACAAACCCTCTGATGAGACGATTGATGTGGCCAGGGTCCAGTTAGCATCAGTAGA
1361 AGGATGTCACTAGGAAAGGCCCAGGTATCTGGTAAGTGACTGTGAGGTGTCACAGTACCTGTGACAGGAGAGTGTCCTGA
1441 TGTGCTTGGGAGAAAGGCCGTATGGGGGCCAGGGATGGAAGAGACAGTGTGTGGCCACAGAAATTCCTGTCCATCCACCA
1521 CCAGTGCTGCTCCCTGTGTGGGCTTTAGGGCGAGTGGCCCCGAACCTTGGCCCAGTGCTTTGTCCCAGGCCAGAGTCTTG
1601 GCAATGCCACATGCTGGCAGCTTTCTCACTGAGAAGGTCCTAGCTTACCCCTGTGTGCTGGCCTTGGATTCAGCCCCGAG
1681 AGAGGGGAGAGACCATTCCTCCTGTGGAGTGGGTTCCTTATCACCAGACCGGCCACTCTCAGAACTGGCGTCCACTGTAA
1761 ATCCAGGTGCCTTACGTGTGGCTCTGTCCCTTATGCTGCAGGGGAAAGCTGCATTGCCATTGTTCCCACCTCCTCACTGG
1841 CAGAAAGATGCCAGGGCTGTTAGCACTGTCTCCTCACCTTCTGTTTCTCATTGTGGCTCCTCAAATGGGATTTGCATGTT
1921 CCTGTCAAGCGTAACAACAATCCCTTCTCTCTTTGACAGAGGCCCAGGTGGGACAGTTTCTACTATTTGATATTTGAGTA
2001 TTATCTGGGATGTGGTTCTGGAGCTGCCCAGAGCTGTGCTTAGTAGAGTGTGTCTTGGAAACATGCCCCTGGGCACACTG
2081 TATCTGCTACATTAGTGGGCTATCTCTTATCTGCAGTGTTCGCTTTTGCTAGAAAGAGGATGTGGAGGAAGGAGGAGGTG
2161 GGCAATCTGGCTTGAGTTGTGCTGTATCCTCTTCCTTGTTAGCTTGCCTTAGTCTCACTGGAGACCATTTGCGGATAGTG
2241 CTTGGTCCATGCCCAGCAGGACAGGGCTTTGCTGCTTCTGAAAGTCTGGTGTTCTGTATCTGGGGCTGTGGGTTCCTGTG
2321 TCTAGCTGCTCAGGAAATCTTGAGAAGCATTCCACTCTGGGGTGTAAACCAGTATGAGTTTGAAATTCAAGCGTTTGTAC
2401 CTGAGTTGGGGAGAGAATTGCAAGGCATACTTTCTCTGAAAGTAACAGAACCATTCAGGCTGCCATGTTATTAAGGAATC
2481 TGAACTGTTGATAGCAGTTACCTTGTGGGTGATACAATGGGAGGCGGCAAAAAAACTACCTGCATAGGAGACCCTGCCCT
2561 TTGTCAAGAGCTGGGAGCACATTTCATCAGAGTAGCAGGCCCACCTGGTGCCAGAGGGCCTGCCCCTCCTGCTTCTGTTC
2641 CTTTGCCTTGCAGTCTCCTGGAGAGAGCCTCTCTTTTCCTGTACAGCCTTTGGGCCAAAATGCCCTTCTAGCTTCTCCAA
2721 AGAAGATCCGAGTTTATTTCATTCTATGTTTTAAGAGGTAAAAGGACATAACAAGTGAAAGAAGTTTTGGGCTAAAGTAG
2801 GCTATGTCTCCTTATGTATTACTCAATACTGTTTTGCAGAGAAAACATTTTTCAAGCATGTGCTTCCTGAAGACACCTCA
2881 GTCTTTGGGCCATTTGATTTCCAATACATAGGGTGGAAGAATGTGATTTTGGGGCTGACCATAAACTGGAAATTTGTGAA
2961 ATGGCAGTGATTGGGCAATCTTCAGTTTATTTTTTCAGTTGAAGTGGAACTCATTTCTGGAATGGATTTAATAGGCTGTG
3041 TCTAATGTACAAACTGGGTGAGTCCTGCCTTAGTGTGTCCTGCCCCACCGGTACGCTTCCAGGATACTCTTTTCCCCTCT
3121 GTAAAGTCACTTTCTTCTGATGGCCAGTGTCACTATGATGTCAGTGAGGTCTGGGGATGAGGACAGTGTGTCCTGAAATT
3201 CACAGGACTGACTCCTCACCCCAGTGCACGAGGATTCCTGTGGCATCAGGTGCTGCTGTACCTGGTGTAGGAGCCTAATC
3281 ATTGAACCATTGTGTTACTCACATTCCATGTCACAGAACATATCAGCCTCAAGAAGGATTTGGTGGAGGTGGATTTACCA
3361 CTGGTTTTACAAAGGACCGTGTAAAGTCATTGAAGTTGTGAAAGTCTATTTTTTTTCCTGTAAATCTATTTTTTACAGAA
3441 TATAAGAAACATCAATGACCTGATCTGTCCTTCCTCCTCCTTCCCGCTTCCCCCAAAATCACATTCCAGTTTTTATTGTC
3521 TTTGTGTCCAAAGTAAACTAGGTGACTTATTTGTATAAAATGTTATTTTGCCACATGAGACAGTAATAAAAGAAAGATTT
3601 TCACAGTAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gcUCACACU--CUAGUGUGGAGGg 5'
            | ||  |  | || ||||||| 
Target 5' gcATTGCCATTGTTCCCACCTCCt 3'
1811 - 1834 150.00 -13.00
2
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     || ||||||| 
Target 5' gtagctcctccTCTCACCTCCg 3'
432 - 453 147.00 -12.60
3
miRNA  3' gcucacacucuaGUGUGGAGGg 5'
                      ||||:|||| 
Target 5' acaagcttgctcCACATCTCCt 3'
707 - 728 134.00 -14.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN18736967 17 COSMIC
COSN7313428 34 COSMIC
COSN31507309 36 COSMIC
COSN31582055 48 COSMIC
COSN31612316 54 COSMIC
COSN30149701 58 COSMIC
COSN30711517 77 COSMIC
COSN31557960 175 COSMIC
COSN31526294 182 COSMIC
COSN26720505 371 COSMIC
COSN31881880 374 COSMIC
COSN16114360 714 COSMIC
COSN17078374 1089 COSMIC
COSN10099404 1266 COSMIC
COSN31530192 1747 COSMIC
COSN31596361 1877 COSMIC
COSN1560051 2011 COSMIC
COSN7313430 2457 COSMIC
COSN15979247 2527 COSMIC
COSN5932672 2890 COSMIC
COSN20110220 3114 COSMIC
COSN30540491 3205 COSMIC
COSN8698048 3216 COSMIC
COSN28184091 3218 COSMIC
COSN31482089 3231 COSMIC
COSN28185898 3343 COSMIC
COSN26107386 3605 COSMIC
rs3752531 17 GWAS
rs78686363 149 GWAS
rs2066938 2781 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1055130792 6 dbSNP
rs776491799 7 dbSNP
rs747915739 9 dbSNP
rs769596633 10 dbSNP
rs773044089 11 dbSNP
rs779329040 14 dbSNP
rs3752531 17 dbSNP
rs1446146295 18 dbSNP
rs773717575 22 dbSNP
rs1011750206 25 dbSNP
rs1246407546 26 dbSNP
rs946285712 27 dbSNP
rs1021782546 28 dbSNP
rs1189534400 29 dbSNP
rs761257123 31 dbSNP
rs1352322195 32 dbSNP
rs764439356 35 dbSNP
rs373333532 36 dbSNP
rs1423903007 37 dbSNP
rs565266042 38 dbSNP
rs1178218322 39 dbSNP
rs1215081784 40 dbSNP
rs890786169 41 dbSNP
rs1270090644 42 dbSNP
rs1434099131 44 dbSNP
rs1254409155 46 dbSNP
rs1450398138 48 dbSNP
rs376819686 49 dbSNP
rs765555274 50 dbSNP
rs1289754803 55 dbSNP
rs960714159 58 dbSNP
rs1302248709 63 dbSNP
rs376031980 68 dbSNP
rs1345384568 69 dbSNP
rs764998621 104 dbSNP
rs1305778585 108 dbSNP
rs899680501 114 dbSNP
rs1330478764 120 dbSNP
rs1318838311 126 dbSNP
rs550343511 135 dbSNP
rs1382431674 137 dbSNP
rs1026367284 139 dbSNP
rs780316049 140 dbSNP
rs1397612427 141 dbSNP
rs1054564832 142 dbSNP
rs984706062 143 dbSNP
rs1453226645 147 dbSNP
rs78686363 149 dbSNP
rs1248489074 151 dbSNP
rs982692889 152 dbSNP
rs867607087 156 dbSNP
rs1216313404 158 dbSNP
rs974543861 159 dbSNP
rs923397278 168 dbSNP
rs696335 170 dbSNP
rs1344332916 174 dbSNP
rs971353805 178 dbSNP
rs1053131859 180 dbSNP
rs143118055 181 dbSNP
rs891782779 181 dbSNP
rs1297408664 182 dbSNP
rs1415138049 183 dbSNP
rs1393494729 186 dbSNP
rs879079391 194 dbSNP
rs777036303 196 dbSNP
rs530139778 210 dbSNP
rs550257165 211 dbSNP
rs906095971 212 dbSNP
rs563762346 213 dbSNP
rs1371812590 216 dbSNP
rs1193428374 229 dbSNP
rs112437383 231 dbSNP
rs552581349 237 dbSNP
rs990359047 243 dbSNP
rs565867894 245 dbSNP
rs1273877967 251 dbSNP
rs1026021450 257 dbSNP
rs1337416887 258 dbSNP
rs950347814 260 dbSNP
rs946337735 265 dbSNP
rs1006168777 267 dbSNP
rs1233699958 269 dbSNP
rs1041919527 273 dbSNP
rs1324716124 274 dbSNP
rs890797437 280 dbSNP
rs1446908597 284 dbSNP
rs149912870 290 dbSNP
rs372430072 291 dbSNP
rs569954315 292 dbSNP
rs1407668877 301 dbSNP
rs974604285 307 dbSNP
rs1338541601 316 dbSNP
rs923062108 317 dbSNP
rs553579635 321 dbSNP
rs989299683 322 dbSNP
rs1335462626 325 dbSNP
rs913264593 331 dbSNP
rs1213127029 336 dbSNP
rs1251270269 338 dbSNP
rs995645113 343 dbSNP
rs947403752 356 dbSNP
rs536841564 358 dbSNP
rs1336835132 365 dbSNP
rs773002223 367 dbSNP
rs556688340 369 dbSNP
rs1057336005 376 dbSNP
rs971401229 381 dbSNP
rs1439406318 385 dbSNP
rs762803964 386 dbSNP
rs1375434701 389 dbSNP
rs1461433706 393 dbSNP
rs1325992259 415 dbSNP
rs1462485298 424 dbSNP
rs895972142 426 dbSNP
rs1397302927 428 dbSNP
rs981494656 429 dbSNP
rs1405095743 430 dbSNP
rs576508675 439 dbSNP
rs1179110558 445 dbSNP
rs958859161 448 dbSNP
rs374599118 453 dbSNP
rs552900037 454 dbSNP
rs1469797568 458 dbSNP
rs1271148369 467 dbSNP
rs192048514 468 dbSNP
rs183373729 469 dbSNP
rs964630571 470 dbSNP
rs573388192 481 dbSNP
rs696336 482 dbSNP
rs1232641918 484 dbSNP
rs1442428073 485 dbSNP
rs561331989 495 dbSNP
rs377665659 502 dbSNP
rs954682580 506 dbSNP
rs1436224804 514 dbSNP
rs988633587 515 dbSNP
rs1161715514 521 dbSNP
rs913338308 524 dbSNP
rs868605802 525 dbSNP
rs559032940 527 dbSNP
rs978740813 527 dbSNP
rs575017064 532 dbSNP
rs1238465025 533 dbSNP
rs886943232 533 dbSNP
rs1004019909 535 dbSNP
rs1486153020 538 dbSNP
rs1046250332 541 dbSNP
rs760806828 562 dbSNP
rs927291383 568 dbSNP
rs1280549751 573 dbSNP
rs1414958619 585 dbSNP
rs1345046737 586 dbSNP
rs1299829525 588 dbSNP
rs1458372166 596 dbSNP
rs1219215656 611 dbSNP
rs937649995 616 dbSNP
rs1291040206 622 dbSNP
rs1158711136 629 dbSNP
rs1383773746 631 dbSNP
rs544027803 638 dbSNP
rs1436663138 654 dbSNP
rs575130212 655 dbSNP
rs917456123 656 dbSNP
rs1376063327 660 dbSNP
rs1175435658 664 dbSNP
rs1398642463 666 dbSNP
rs371451646 669 dbSNP
rs188386615 674 dbSNP
rs144940361 691 dbSNP
rs1011665786 697 dbSNP
rs752356557 704 dbSNP
rs552617415 709 dbSNP
rs1291374998 710 dbSNP
rs1254951064 714 dbSNP
rs886190933 718 dbSNP
rs1005939588 719 dbSNP
rs559655091 727 dbSNP
rs1321662705 731 dbSNP
rs1298302980 733 dbSNP
rs1217193977 734 dbSNP
rs1340213417 737 dbSNP
rs1294283820 738 dbSNP
rs912713464 741 dbSNP
rs1037405514 748 dbSNP
rs191278145 749 dbSNP
rs1202441680 750 dbSNP
rs996132078 757 dbSNP
rs114690281 759 dbSNP
rs1356229767 764 dbSNP
rs76903321 767 dbSNP
rs1010488244 769 dbSNP
rs1020041735 771 dbSNP
rs1477376503 777 dbSNP
rs1418394302 779 dbSNP
rs1189772233 781 dbSNP
rs968809480 787 dbSNP
rs754277092 789 dbSNP
rs1485562909 795 dbSNP
rs1177296231 797 dbSNP
rs978814445 804 dbSNP
rs1034338929 808 dbSNP
rs1481292986 810 dbSNP
rs958946490 811 dbSNP
rs1209285242 822 dbSNP
rs1247405362 823 dbSNP
rs1254587998 823 dbSNP
rs920947518 823 dbSNP
rs1338960705 825 dbSNP
rs992812590 831 dbSNP
rs760358056 837 dbSNP
rs182422380 847 dbSNP
rs1468245966 848 dbSNP
rs879540452 853 dbSNP
rs879613785 867 dbSNP
rs930202350 869 dbSNP
rs1173989308 873 dbSNP
rs1166868642 882 dbSNP
rs1456153006 884 dbSNP
rs1375770114 887 dbSNP
rs982955689 888 dbSNP
rs910042902 896 dbSNP
rs1367538983 898 dbSNP
rs536877010 903 dbSNP
rs1420495876 912 dbSNP
rs1310920809 920 dbSNP
rs941797839 928 dbSNP
rs939732788 932 dbSNP
rs1037437090 934 dbSNP
rs765529607 935 dbSNP
rs1254136167 936 dbSNP
rs906355164 938 dbSNP
rs1354617479 939 dbSNP
rs1265090368 940 dbSNP
rs931659446 942 dbSNP
rs1391947852 944 dbSNP
rs1306347302 952 dbSNP
rs1002133046 955 dbSNP
rs146637109 962 dbSNP
rs1055411033 963 dbSNP
rs1235632027 969 dbSNP
rs1325377657 992 dbSNP
rs1051396027 994 dbSNP
rs1158914304 997 dbSNP
rs548041144 997 dbSNP
rs1378067691 1004 dbSNP
rs1021570663 1010 dbSNP
rs1454298090 1016 dbSNP
rs1396225408 1026 dbSNP
rs890375549 1029 dbSNP
rs1450393079 1046 dbSNP
rs967460683 1051 dbSNP
rs570230813 1057 dbSNP
rs1277275387 1058 dbSNP
rs1020111655 1066 dbSNP
rs539119983 1070 dbSNP
rs1019776405 1072 dbSNP
rs1481227613 1078 dbSNP
rs965895434 1088 dbSNP
rs80091642 1091 dbSNP
rs1028969254 1095 dbSNP
rs1034407541 1100 dbSNP
rs758854634 1103 dbSNP
rs952979511 1104 dbSNP
rs983811751 1111 dbSNP
rs1395307916 1118 dbSNP
rs566420526 1125 dbSNP
rs1318774321 1136 dbSNP
rs1401578385 1140 dbSNP
rs1358261312 1144 dbSNP
rs958796663 1145 dbSNP
rs535093535 1159 dbSNP
rs1434803815 1160 dbSNP
rs1396431155 1161 dbSNP
rs1170284748 1197 dbSNP
rs186657913 1203 dbSNP
rs1477355630 1206 dbSNP
rs1377519533 1214 dbSNP
rs1194371922 1218 dbSNP
rs879776777 1227 dbSNP
rs1478973494 1236 dbSNP
rs1453485358 1238 dbSNP
rs867835420 1241 dbSNP
rs1486111748 1242 dbSNP
rs1280883516 1243 dbSNP
rs1374627767 1243 dbSNP
rs1462398556 1249 dbSNP
rs1297563574 1251 dbSNP
rs1344263908 1261 dbSNP
rs555287337 1262 dbSNP
rs1394354305 1264 dbSNP
rs752084222 1279 dbSNP
rs1338065155 1294 dbSNP
rs1277328128 1296 dbSNP
rs981822754 1302 dbSNP
rs755433288 1308 dbSNP
rs910075699 1312 dbSNP
rs1331661696 1316 dbSNP
rs927820458 1318 dbSNP
rs535708488 1325 dbSNP
rs549271164 1326 dbSNP
rs779412535 1327 dbSNP
rs1421997765 1330 dbSNP
rs937817371 1337 dbSNP
rs1326730567 1340 dbSNP
rs975555477 1345 dbSNP
rs191257822 1349 dbSNP
rs577435214 1352 dbSNP
rs1239393459 1353 dbSNP
rs1185544775 1361 dbSNP
rs931714916 1367 dbSNP
rs1275163968 1372 dbSNP
rs1300220341 1380 dbSNP
rs1308466623 1388 dbSNP
rs1273637513 1390 dbSNP
rs764099126 1392 dbSNP
rs546240383 1393 dbSNP
rs893745764 1401 dbSNP
rs946619283 1406 dbSNP
rs1043080767 1408 dbSNP
rs1380915365 1415 dbSNP
rs1250128968 1428 dbSNP
rs1282006028 1429 dbSNP
rs1359152277 1434 dbSNP
rs1446658595 1436 dbSNP
rs903185957 1440 dbSNP
rs1019617972 1441 dbSNP
rs998904141 1441 dbSNP
rs1398694694 1443 dbSNP
rs1051899488 1444 dbSNP
rs997452707 1445 dbSNP
rs890124631 1446 dbSNP
rs755177777 1460 dbSNP
rs781409500 1461 dbSNP
rs1180565098 1471 dbSNP
rs1456419827 1484 dbSNP
rs1237439477 1485 dbSNP
rs1214108781 1486 dbSNP
rs1323219710 1486 dbSNP
rs1287462488 1487 dbSNP
rs1227438930 1490 dbSNP
rs1350910662 1494 dbSNP
rs1263525798 1498 dbSNP
rs953115960 1501 dbSNP
rs1375359505 1507 dbSNP
rs1041602196 1510 dbSNP
rs1428914477 1512 dbSNP
rs559584006 1514 dbSNP
rs747856456 1519 dbSNP
rs904418364 1519 dbSNP
rs1321977607 1528 dbSNP
rs796494995 1535 dbSNP
rs696337 1546 dbSNP
rs529720472 1552 dbSNP
rs183421410 1553 dbSNP
rs1393871811 1559 dbSNP
rs1014335429 1562 dbSNP
rs769992662 1563 dbSNP
rs1015275370 1567 dbSNP
rs1024767196 1571 dbSNP
rs1322819406 1579 dbSNP
rs1447250612 1582 dbSNP
rs951395801 1583 dbSNP
rs1004497152 1585 dbSNP
rs1237343946 1589 dbSNP
rs376960404 1594 dbSNP
rs1352252571 1603 dbSNP
rs1017210240 1605 dbSNP
rs962916369 1608 dbSNP
rs1370337657 1610 dbSNP
rs1273487603 1619 dbSNP
rs1382002009 1625 dbSNP
rs975586479 1626 dbSNP
rs981873755 1636 dbSNP
rs1293957013 1638 dbSNP
rs1361422407 1645 dbSNP
rs1300197449 1652 dbSNP
rs61229807 1660 dbSNP
rs937764719 1661 dbSNP
rs953288512 1663 dbSNP
rs1434877504 1669 dbSNP
rs188705633 1678 dbSNP
rs1190428232 1680 dbSNP
rs911574399 1694 dbSNP
rs945726741 1695 dbSNP
rs1041338682 1703 dbSNP
rs1211376218 1712 dbSNP
rs925877842 1717 dbSNP
rs1487750074 1725 dbSNP
rs1042253414 1726 dbSNP
rs770688954 1730 dbSNP
rs934639394 1731 dbSNP
rs1299760156 1733 dbSNP
rs1041148040 1735 dbSNP
rs147528763 1739 dbSNP
rs1341592717 1742 dbSNP
rs7134219 1743 dbSNP
rs1486029552 1750 dbSNP
rs1056068887 1751 dbSNP
rs1280471372 1764 dbSNP
rs1398435762 1766 dbSNP
rs894307601 1771 dbSNP
rs774310734 1776 dbSNP
rs76659878 1777 dbSNP
rs996937900 1779 dbSNP
rs696338 1795 dbSNP
rs1425581354 1799 dbSNP
rs1466073330 1799 dbSNP
rs1191213297 1800 dbSNP
rs112701930 1801 dbSNP
rs1256377322 1811 dbSNP
rs1183122246 1818 dbSNP
rs1481949399 1819 dbSNP
rs1254895635 1824 dbSNP
rs1005808617 1826 dbSNP
rs1015828547 1827 dbSNP
rs1016910984 1828 dbSNP
rs1217138674 1830 dbSNP
rs193181694 1832 dbSNP
rs1317540791 1834 dbSNP
rs1313634806 1837 dbSNP
rs1459943873 1838 dbSNP
rs962988214 1839 dbSNP
rs775003560 1847 dbSNP
rs1003237251 1856 dbSNP
rs1034675925 1857 dbSNP
rs1453383807 1860 dbSNP
rs145117768 1872 dbSNP
rs569068929 1874 dbSNP
rs1377687975 1882 dbSNP
rs1464868261 1888 dbSNP
rs1368702666 1891 dbSNP
rs530901916 1892 dbSNP
rs535458131 1895 dbSNP
rs1354199198 1900 dbSNP
rs1178677939 1902 dbSNP
rs1458630976 1903 dbSNP
rs11065225 1905 dbSNP
rs568784990 1906 dbSNP
rs977998247 1912 dbSNP
rs911661410 1917 dbSNP
rs537711314 1921 dbSNP
rs1247334100 1923 dbSNP
rs967064145 1931 dbSNP
rs557599515 1932 dbSNP
rs56338110 1940 dbSNP
rs138940358 1941 dbSNP
rs763454839 1943 dbSNP
rs922619417 1949 dbSNP
rs1211421266 1950 dbSNP
rs141509775 1951 dbSNP
rs766848997 1954 dbSNP
rs150438359 1956 dbSNP
rs1456099106 1969 dbSNP
rs932734812 1976 dbSNP
rs1049794977 1981 dbSNP
rs915759636 1991 dbSNP
rs1256710849 1992 dbSNP
rs1474216196 1998 dbSNP
rs138209088 2005 dbSNP
rs1408863319 2007 dbSNP
rs1437746842 2010 dbSNP
rs1418684392 2011 dbSNP
rs755534650 2025 dbSNP
rs1037187594 2027 dbSNP
rs149574580 2029 dbSNP
rs1291254757 2030 dbSNP
rs1045950816 2033 dbSNP
rs897437297 2034 dbSNP
rs1397211053 2038 dbSNP
rs374372019 2054 dbSNP
rs940078521 2060 dbSNP
rs781138012 2064 dbSNP
rs867188484 2069 dbSNP
rs959038184 2076 dbSNP
rs80114141 2079 dbSNP
rs1389582414 2083 dbSNP
rs185250595 2084 dbSNP
rs1421132902 2089 dbSNP
rs997534692 2090 dbSNP
rs1028585569 2091 dbSNP
rs1022022118 2092 dbSNP
rs891346529 2094 dbSNP
rs1008395742 2096 dbSNP
rs1021047353 2097 dbSNP
rs1201499035 2101 dbSNP
rs967136337 2103 dbSNP
rs367948507 2111 dbSNP
rs923772901 2122 dbSNP
rs564028736 2123 dbSNP
rs147232207 2124 dbSNP
rs536726605 2132 dbSNP
rs1489379776 2140 dbSNP
rs767661922 2158 dbSNP
rs1233480530 2159 dbSNP
rs965968396 2161 dbSNP
rs1480358468 2165 dbSNP
rs977139960 2166 dbSNP
rs1032664202 2172 dbSNP
rs975989994 2175 dbSNP
rs546452841 2178 dbSNP
rs1344711429 2183 dbSNP
rs1278595075 2191 dbSNP
rs1401519243 2200 dbSNP
rs1397116260 2211 dbSNP
rs922595738 2213 dbSNP
rs957022571 2215 dbSNP
rs1414497516 2219 dbSNP
rs1403562614 2233 dbSNP
rs991534183 2234 dbSNP
rs1464982799 2238 dbSNP
rs915849081 2239 dbSNP
rs1429081461 2241 dbSNP
rs1194799174 2250 dbSNP
rs1478940697 2251 dbSNP
rs1393691358 2252 dbSNP
rs1192579235 2256 dbSNP
rs1055059 2258 dbSNP
rs1258342380 2265 dbSNP
rs1198717415 2267 dbSNP
rs981330700 2278 dbSNP
rs138935444 2282 dbSNP
rs1354547825 2287 dbSNP
rs1440827734 2294 dbSNP
rs548983767 2303 dbSNP
rs1328753942 2305 dbSNP
rs1315705624 2306 dbSNP
rs568821825 2308 dbSNP
rs1269170373 2309 dbSNP
rs1448133566 2316 dbSNP
rs898550718 2317 dbSNP
rs932685293 2319 dbSNP
rs1372691935 2322 dbSNP
rs1405936123 2326 dbSNP
rs941404899 2331 dbSNP
rs34280477 2334 dbSNP
rs1037244743 2337 dbSNP
rs1441234637 2340 dbSNP
rs1417642184 2346 dbSNP
rs537832980 2362 dbSNP
rs1342645097 2386 dbSNP
rs1216202527 2389 dbSNP
rs756312717 2393 dbSNP
rs551344728 2394 dbSNP
rs1202512916 2402 dbSNP
rs1238662672 2418 dbSNP
rs902672588 2420 dbSNP
rs1456232006 2425 dbSNP
rs894823548 2427 dbSNP
rs1255018007 2435 dbSNP
rs770776830 2442 dbSNP
rs1357987326 2443 dbSNP
rs1281953057 2448 dbSNP
rs1011887946 2458 dbSNP
rs1469042944 2459 dbSNP
rs998591646 2460 dbSNP
rs1382709223 2470 dbSNP
rs1332552389 2471 dbSNP
rs778663039 2505 dbSNP
rs1449645614 2511 dbSNP
rs1353179943 2512 dbSNP
rs1328576545 2516 dbSNP
rs142855063 2518 dbSNP
rs540059883 2526 dbSNP
rs147410044 2527 dbSNP
rs59385917 2529 dbSNP
rs1476596279 2535 dbSNP
rs1023045617 2541 dbSNP
rs971378958 2547 dbSNP
rs981746704 2551 dbSNP
rs1380851947 2553 dbSNP
rs573311775 2559 dbSNP
rs908402706 2564 dbSNP
rs1180508945 2566 dbSNP
rs1437737242 2578 dbSNP
rs939847150 2584 dbSNP
rs1221974622 2589 dbSNP
rs1452990955 2594 dbSNP
rs1419405641 2599 dbSNP
rs1408762519 2604 dbSNP
rs965866187 2606 dbSNP
rs1221097697 2612 dbSNP
rs1167876172 2617 dbSNP
rs1243012270 2623 dbSNP
rs1310795391 2623 dbSNP
rs190104967 2626 dbSNP
rs535534508 2629 dbSNP
rs973877251 2638 dbSNP
rs555352322 2643 dbSNP
rs555348338 2646 dbSNP
rs575273750 2650 dbSNP
rs932692140 2657 dbSNP
rs1301457232 2665 dbSNP
rs1028880072 2674 dbSNP
rs1329074651 2680 dbSNP
rs1049788411 2699 dbSNP
rs1398909977 2701 dbSNP
rs912553837 2703 dbSNP
rs944328571 2704 dbSNP
rs1042608357 2711 dbSNP
rs1191569043 2719 dbSNP
rs1266501905 2720 dbSNP
rs1478847393 2720 dbSNP
rs1198308994 2721 dbSNP
rs1488400241 2725 dbSNP
rs985500110 2727 dbSNP
rs1270610843 2729 dbSNP
rs909883658 2730 dbSNP
rs111300193 2731 dbSNP
rs1001006806 2745 dbSNP
rs1216766101 2747 dbSNP
rs1275074478 2759 dbSNP
rs972781077 2768 dbSNP
rs564065680 2769 dbSNP
rs918763613 2773 dbSNP
rs1053843983 2775 dbSNP
rs771925476 2777 dbSNP
rs2066938 2781 dbSNP
rs1449010162 2783 dbSNP
rs1057132299 2785 dbSNP
rs1301486686 2791 dbSNP
rs1341331593 2797 dbSNP
rs1300136942 2805 dbSNP
rs895429307 2807 dbSNP
rs372192283 2809 dbSNP
rs540438111 2811 dbSNP
rs1427002497 2813 dbSNP
rs903495061 2816 dbSNP
rs1175404840 2821 dbSNP
rs999232192 2827 dbSNP
rs1190729207 2832 dbSNP
rs1184273023 2836 dbSNP
rs560061031 2842 dbSNP
rs538861980 2848 dbSNP
rs1211514100 2849 dbSNP
rs971456640 2852 dbSNP
rs866450269 2859 dbSNP
rs1318886750 2861 dbSNP
rs1015537080 2868 dbSNP
rs1380737632 2876 dbSNP
rs1361430830 2879 dbSNP
rs1303475695 2880 dbSNP
rs1402137980 2887 dbSNP
rs984700910 2894 dbSNP
rs1335867128 2903 dbSNP
rs1465893799 2911 dbSNP
rs1425333804 2913 dbSNP
rs1167966557 2914 dbSNP
rs1427545586 2922 dbSNP
rs768023736 2940 dbSNP
rs1183069025 2941 dbSNP
rs139701993 2964 dbSNP
rs919748695 2965 dbSNP
rs972833352 2968 dbSNP
rs2239757 2971 dbSNP
rs761546337 2975 dbSNP
rs939420546 2979 dbSNP
rs1225581429 2999 dbSNP
rs992362237 3004 dbSNP
rs1313569928 3010 dbSNP
rs1356085079 3026 dbSNP
rs1316127572 3030 dbSNP
rs1380509553 3038 dbSNP
rs1218162082 3039 dbSNP
rs1335929304 3048 dbSNP
rs1447421852 3053 dbSNP
rs985932118 3056 dbSNP
rs562568916 3060 dbSNP
rs79516342 3065 dbSNP
rs948338144 3075 dbSNP
rs1461211736 3087 dbSNP
rs944051244 3090 dbSNP
rs1283948850 3091 dbSNP
rs1487521981 3092 dbSNP
rs142613584 3095 dbSNP
rs565711298 3096 dbSNP
rs1367298092 3120 dbSNP
rs753040876 3123 dbSNP
rs544375610 3130 dbSNP
rs1042346940 3134 dbSNP
rs150548997 3138 dbSNP
rs1266201386 3139 dbSNP
rs1364756082 3145 dbSNP
rs774790193 3147 dbSNP
rs1050313365 3148 dbSNP
rs888915942 3153 dbSNP
rs1314451534 3165 dbSNP
rs1157172963 3175 dbSNP
rs539719216 3187 dbSNP
rs1337433686 3196 dbSNP
rs936891662 3204 dbSNP
rs1304645524 3208 dbSNP
rs1274148785 3209 dbSNP
rs1368485232 3210 dbSNP
rs1053918992 3211 dbSNP
rs1055070 3214 dbSNP
rs962718777 3215 dbSNP
rs1386154824 3222 dbSNP
rs768019190 3225 dbSNP
rs1158690595 3226 dbSNP
rs1044550720 3230 dbSNP
rs753121187 3231 dbSNP
rs1180125795 3240 dbSNP
rs1418797081 3244 dbSNP
rs566913366 3251 dbSNP
rs1266474970 3262 dbSNP
rs1328697468 3271 dbSNP
rs1352133581 3282 dbSNP
rs756256924 3283 dbSNP
rs746623626 3286 dbSNP
rs1217385848 3290 dbSNP
rs992618397 3302 dbSNP
rs1258818525 3303 dbSNP
rs1332228313 3312 dbSNP
rs1238231961 3321 dbSNP
rs1015232798 3324 dbSNP
rs536036417 3325 dbSNP
rs1337632161 3326 dbSNP
rs961316820 3353 dbSNP
rs1402760600 3360 dbSNP
rs1344431560 3364 dbSNP
rs1239965236 3378 dbSNP
rs995422908 3379 dbSNP
rs1401237330 3380 dbSNP
rs1026846284 3384 dbSNP
rs1387783627 3385 dbSNP
rs1157407106 3391 dbSNP
rs1453658488 3401 dbSNP
rs1268392962 3409 dbSNP
rs1378627630 3409 dbSNP
rs138947126 3409 dbSNP
rs979665991 3409 dbSNP
rs954001919 3417 dbSNP
rs985284292 3418 dbSNP
rs1236941248 3423 dbSNP
rs1259722530 3428 dbSNP
rs139491437 3429 dbSNP
rs1052086762 3436 dbSNP
rs1199275862 3441 dbSNP
rs2071708 3443 dbSNP
rs978071928 3445 dbSNP
rs1278362324 3451 dbSNP
rs1229152390 3453 dbSNP
rs1324234071 3454 dbSNP
rs537880908 3456 dbSNP
rs1407431536 3460 dbSNP
rs1339136073 3469 dbSNP
rs933094744 3473 dbSNP
rs1429019675 3477 dbSNP
rs1171724034 3478 dbSNP
rs1476499027 3484 dbSNP
rs557696124 3486 dbSNP
rs888974638 3487 dbSNP
rs34453952 3488 dbSNP
rs1244833270 3491 dbSNP
rs1237173122 3497 dbSNP
rs1460758658 3509 dbSNP
rs936947668 3512 dbSNP
rs1037527175 3516 dbSNP
rs1175244156 3521 dbSNP
rs1395488888 3522 dbSNP
rs1433968400 3528 dbSNP
rs1337010274 3532 dbSNP
rs1269113676 3534 dbSNP
rs1170761195 3537 dbSNP
rs990124844 3538 dbSNP
rs577889496 3548 dbSNP
rs993412615 3551 dbSNP
rs1025678155 3552 dbSNP
rs960951972 3569 dbSNP
rs1013688514 3571 dbSNP
rs1024110292 3573 dbSNP
rs1328345109 3575 dbSNP
rs1445242996 3588 dbSNP
rs764074770 3592 dbSNP
rs969430528 3593 dbSNP
rs754114552 3595 dbSNP
rs1238605281 3597 dbSNP
rs1304577489 3603 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     || ||||||| 
Target 5' ----------uUCCCACCUCCu 3'
1 - 12
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000344651.4 | 3UTR | UUCCCACCUCCUCACUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
231 hsa-miR-3689d Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059166 TXNIP thioredoxin interacting protein 2 4
MIRT080699 KIAA1468 KIAA1468 2 2
MIRT218770 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT278059 KHNYN KH and NYN domain containing 2 2
MIRT345933 EIF4A1 eukaryotic translation initiation factor 4A1 2 2
MIRT366238 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT449689 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT451149 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451266 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT451375 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451570 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451585 HIRIP3 HIRA interacting protein 3 2 2
MIRT451614 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451763 ZNF611 zinc finger protein 611 2 6
MIRT452383 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452573 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452735 PTGES3L prostaglandin E synthase 3 like 2 6
MIRT452867 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452975 CABP4 calcium binding protein 4 2 2
MIRT453215 CERS1 ceramide synthase 1 2 2
MIRT453259 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453449 GLG1 golgi glycoprotein 1 2 2
MIRT453479 PITPNM3 PITPNM family member 3 2 2
MIRT453663 CD207 CD207 molecule 2 6
MIRT453724 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453760 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT454181 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454330 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT454338 CDKL1 cyclin dependent kinase like 1 2 2
MIRT454427 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454665 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454825 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT455130 TBC1D25 TBC1 domain family member 25 2 2
MIRT455166 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455416 RXRB retinoid X receptor beta 2 2
MIRT455668 GLO1 glyoxalase I 2 2
MIRT455999 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456446 TMEM81 transmembrane protein 81 2 2
MIRT456642 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT456728 TMEM239 transmembrane protein 239 2 2
MIRT457131 ASPH aspartate beta-hydroxylase 2 2
MIRT457157 MXRA7 matrix remodeling associated 7 2 2
MIRT457358 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457458 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457619 UPK3BL uroplakin 3B like 1 2 2
MIRT457692 ZNF587 zinc finger protein 587 2 2
MIRT457727 SMOX spermine oxidase 2 2
MIRT457788 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457875 THEM6 thioesterase superfamily member 6 2 4
MIRT457909 ZNF212 zinc finger protein 212 2 2
MIRT458395 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT458496 MARVELD2 MARVEL domain containing 2 2 2
MIRT458544 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT458577 TCOF1 treacle ribosome biogenesis factor 1 2 2
MIRT458732 CES2 carboxylesterase 2 2 2
MIRT458814 ZNF843 zinc finger protein 843 2 2
MIRT458931 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459341 ZNF17 zinc finger protein 17 2 2
MIRT459365 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459572 NLGN2 neuroligin 2 2 2
MIRT460015 DTX3L deltex E3 ubiquitin ligase 3L 2 4
MIRT460144 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460653 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460798 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT461058 KCNK6 potassium two pore domain channel subfamily K member 6 2 4
MIRT461458 SLC19A3 solute carrier family 19 member 3 2 2
MIRT461572 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461927 TNFSF14 TNF superfamily member 14 2 2
MIRT461953 C3 complement C3 2 2
MIRT462278 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT462744 EFNB1 ephrin B1 2 2
MIRT463136 ZNF451 zinc finger protein 451 2 4
MIRT463566 ZBTB39 zinc finger and BTB domain containing 39 2 6
MIRT463866 WNT7B Wnt family member 7B 2 2
MIRT464326 UST uronyl 2-sulfotransferase 2 2
MIRT464796 UBE2F ubiquitin conjugating enzyme E2 F (putative) 2 2
MIRT465034 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT466207 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT467007 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467029 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT468001 SKI SKI proto-oncogene 2 2
MIRT468031 SIKE1 suppressor of IKBKE 1 2 6
MIRT468575 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT468834 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT468970 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469450 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470888 PLXND1 plexin D1 2 2
MIRT470953 PKM pyruvate kinase, muscle 2 2
MIRT471828 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472590 NACC1 nucleus accumbens associated 1 2 2
MIRT472805 MTMR12 myotubularin related protein 12 2 2
MIRT472818 MTMR10 myotubularin related protein 10 2 6
MIRT472914 MSN moesin 2 2
MIRT474558 KLHDC3 kelch domain containing 3 2 2
MIRT474716 KIF13A kinesin family member 13A 2 6
MIRT475279 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475300 IFNLR1 interferon lambda receptor 1 2 2
MIRT475759 HDLBP high density lipoprotein binding protein 2 2
MIRT475786 HDGF heparin binding growth factor 2 2
MIRT475933 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476212 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT476238 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 4
MIRT476799 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477988 DNAL1 dynein axonemal light chain 1 2 2
MIRT478317 DDN dendrin 2 2
MIRT479257 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479344 CEP97 centrosomal protein 97 2 2
MIRT479522 CDCA4 cell division cycle associated 4 2 2
MIRT479906 CCDC117 coiled-coil domain containing 117 2 6
MIRT481147 AVL9 AVL9 cell migration associated 2 6
MIRT481735 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482089 ALG8 ALG8, alpha-1,3-glucosyltransferase 2 2
MIRT482389 AEN apoptosis enhancing nuclease 2 2
MIRT483093 TFPI tissue factor pathway inhibitor 2 2
MIRT484246 ANK1 ankyrin 1 2 2
MIRT484342 EPN1 epsin 1 2 4
MIRT489141 C5orf38 chromosome 5 open reading frame 38 2 2
MIRT489163 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489547 SOX11 SRY-box 11 2 4
MIRT489780 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489799 KRT80 keratin 80 2 6
MIRT490535 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT492198 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492283 SHISA6 shisa family member 6 2 4
MIRT501059 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT501094 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503870 CBS cystathionine-beta-synthase 2 2
MIRT507981 BCL2L13 BCL2 like 13 2 4
MIRT508125 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT508205 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508385 SPTBN2 spectrin beta, non-erythrocytic 2 2 4
MIRT510308 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT510462 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512227 ATXN3 ataxin 3 2 8
MIRT512665 STEAP3 STEAP3 metalloreductase 2 2
MIRT514184 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT515053 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515138 ZNF799 zinc finger protein 799 2 4
MIRT515452 ZNF747 zinc finger protein 747 2 2
MIRT515791 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT515905 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT516129 MRPS16 mitochondrial ribosomal protein S16 2 6
MIRT516679 ZNF860 zinc finger protein 860 2 4
MIRT516750 ZNF100 zinc finger protein 100 2 2
MIRT516971 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT517491 NPAP1 nuclear pore associated protein 1 2 2
MIRT517774 PROM2 prominin 2 2 2
MIRT517938 ZNF431 zinc finger protein 431 2 4
MIRT518386 ZNF250 zinc finger protein 250 2 2
MIRT520621 TMEM41B transmembrane protein 41B 2 2
MIRT521028 SLC30A5 solute carrier family 30 member 5 2 2
MIRT521454 RAD51 RAD51 recombinase 2 2
MIRT521564 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT521581 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT522263 NKRF NFKB repressing factor 2 2
MIRT522410 MXI1 MAX interactor 1, dimerization protein 2 2
MIRT522543 MED28 mediator complex subunit 28 2 6
MIRT522915 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT523029 IGF1 insulin like growth factor 1 2 2
MIRT523854 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT524184 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524520 CDK19 cyclin dependent kinase 19 2 2
MIRT524674 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT530257 ZNF620 zinc finger protein 620 2 2
MIRT540691 BMP3 bone morphogenetic protein 3 2 2
MIRT540976 C17orf85 nuclear cap binding subunit 3 2 2
MIRT545505 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT545631 GGCX gamma-glutamyl carboxylase 2 2
MIRT547358 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT550701 MPL MPL proto-oncogene, thrombopoietin receptor 2 4
MIRT550717 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551203 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT553999 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT561081 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT563523 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT564463 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565233 TRAF6 TNF receptor associated factor 6 2 2
MIRT566618 NKAP NFKB activating protein 2 2
MIRT569527 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569639 QPCT glutaminyl-peptide cyclotransferase 2 2
MIRT570253 SSPN sarcospan 2 2
MIRT570570 OTUD7B OTU deubiquitinase 7B 2 2
MIRT570621 MTF2 metal response element binding transcription factor 2 2 2
MIRT571098 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 2
MIRT575196 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575554 Cd99 CD99 antigen 2 2
MIRT575634 Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like 2 2
MIRT608267 NOP14 NOP14 nucleolar protein 2 2
MIRT609314 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT627670 RPL28 ribosomal protein L28 2 2
MIRT631185 TSPAN14 tetraspanin 14 2 2
MIRT631964 YIPF5 Yip1 domain family member 5 2 2
MIRT632885 GINM1 glycoprotein integral membrane 1 2 2
MIRT642618 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT645609 TSPAN6 tetraspanin 6 2 2
MIRT662227 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662329 MYLK3 myosin light chain kinase 3 2 2
MIRT662725 LRRC3C leucine rich repeat containing 3C 2 2
MIRT665520 USP14 ubiquitin specific peptidase 14 2 2
MIRT666634 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT668969 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT670925 DESI1 desumoylating isopeptidase 1 2 2
MIRT673939 ZNF500 zinc finger protein 500 2 2
MIRT674675 PLCE1 phospholipase C epsilon 1 2 2
MIRT675230 MAK male germ cell associated kinase 2 2
MIRT680864 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT681047 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681105 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT683553 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684508 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684812 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT685981 CCDC77 coiled-coil domain containing 77 2 2
MIRT686709 TBC1D19 TBC1 domain family member 19 2 2
MIRT686867 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688908 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT691208 KLHL30 kelch like family member 30 2 2
MIRT692298 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT694380 MTA1 metastasis associated 1 2 2
MIRT696497 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT700686 POLR3D RNA polymerase III subunit D 2 2
MIRT701088 PAPOLG poly(A) polymerase gamma 2 2
MIRT703373 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT706189 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT706648 SMIM19 small integral membrane protein 19 2 2
MIRT709466 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT709699 DMWD DM1 locus, WD repeat containing 2 2
MIRT710693 LYRM4 LYR motif containing 4 2 2
MIRT713457 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT722409 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
MIRT725391 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT725548 DNMT3A DNA methyltransferase 3 alpha 2 2

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