miRTarBase - #MIRT458173


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pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LYRM4   
Synonyms C6orf149, CGI-203, COXPD19, ISD11
Description LYR motif containing 4
Transcript NM_001164841   
Other Transcripts NM_001164840 , NM_020408   
Expression
Putative miRNA Targets on LYRM4
3'UTR of LYRM4
(miRNA target sites are highlighted)		 
>LYRM4|NM_001164841|3'UTR
   1 GGAAACCACCTGACAGACGTTTGCTCTTCCTCACAGAGCTGGTCCACATTGGCCAACTGTATTCAACTGACAAGCTGATC
  81 ATTGAGAATCGAGACATGCCCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCC
 161 ACTCTCTGTTTGAGATGGGGGCTCCCAAAACCAGCTTACAATAGCCTTTTGCGCTGCCTGTCCTGTGGGAGCTGATAAAC
 241 CAAGTCACATTTGCATTCTGTTGCAGGCTTAGTGAAAAAGGACTGCTGTCTTTCCTTGGTTCAAGTGTTAGAATGGAGAG
 321 CTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCACCCCATTCCTACCTTGTAGCTCATGACCATTG
 401 TGTATAGCATTTCTACACTTTGTTTCTTGGTCCTTGGCAATAAAAAGAATGATCTCCCTGAGCCTTTGACCCCAGATAAA
 481 CCCCTCCCAATTAATGCATTTTCATTTCCTACTGATACAAGGCCTGGAGAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCA
 561 ACTCTGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATGGAGTAGGGCAGGGC
 641 TACGGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGTAGGTACACACCCA
 721 GAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACAC
 801 CTGGTGAATGAGAGAGCCCCAGCCTGACCCAAGCCCAGGGCGACTCCCATACCCTGAAGCCTGGGGCATGCTGGGCAGCA
 881 CCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGCACTTCC
 961 CTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGTCATTTTTCTCTATTCTGAAGCTCTCCCACTGTTTTC
1041 AATGTTTAACCAACTGGGGACCCCTGCTCTTTAAGTATATTACAGGTAATAAAGATATTGTTTGTATGCTTTTAAAAAAA
1121 AAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucGGU-CGGUUGAGUGUCACGUcu 5'
            |:| |  :|: |||:|||||  
Target 5' ggCTACGGGGATACACGGTGCAcc 3'
 638 - 661 125.00 -15.40
2 
miRNA  3' ucggUCGGUUGAG---UGUCACGUCu 5'
              ||:: ::||   |:||||| | 
Target 5' ctggAGTTCGTTCAGAATAGTGCTGt 3'
 321 - 346 123.00 -14.70
3 
miRNA  3' ucGGUCGGUUGAGUG----UCACGUCu 5'
            || |  ||:|::|    | ||||| 
Target 5' caCCTGGGAATTTGCTGGAAATGCAGg 3'
 755 - 781 123.00 -11.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
680627 221 ClinVar
680628 224 ClinVar
680629 34415 ClinVar
680636 34431 ClinVar
680631 34432 ClinVar
680632 34468 ClinVar
COSN32075635 26 COSMIC
COSN30685405 69 COSMIC
COSN17080416 80 COSMIC
COSN2166023 752 COSMIC
COSN8798141 797 COSMIC
COSN7886282 932 COSMIC
COSN25961017 976 COSMIC
COSN5631925 1093 COSMIC
COSN195610 1157 COSMIC
COSN24518184 1206 COSMIC
COSN9796802 1346 COSMIC
COSN6323767 1903 COSMIC
COSN397673 2123 COSMIC
COSN15717640 2857 COSMIC
COSN7886279 2940 COSMIC
COSN6323760 3199 COSMIC
COSN28041358 3340 COSMIC
COSN25648573 3501 COSMIC
COSN16452632 3615 COSMIC
COSN26217705 3816 COSMIC
COSN22648589 3893 COSMIC
COSN23289996 3926 COSMIC
COSN2166007 4323 COSMIC
COSN6323756 4364 COSMIC
COSN26364116 4446 COSMIC
COSN4859752 4466 COSMIC
COSN9796789 4669 COSMIC
COSN2166005 5257 COSMIC
COSN30652428 5352 COSMIC
COSN28899441 5424 COSMIC
COSN30630316 5436 COSMIC
COSN19772107 5476 COSMIC
COSN9796783 6312 COSMIC
COSN29922827 7043 COSMIC
COSN32191878 7174 COSMIC
COSN32191877 7317 COSMIC
COSN1334320 8104 COSMIC
COSN22443514 8282 COSMIC
COSN17990455 8618 COSMIC
COSN17988526 8623 COSMIC
COSN17990487 8631 COSMIC
COSN17985021 8637 COSMIC
COSN20343145 8641 COSMIC
COSN17986879 8669 COSMIC
COSN21529849 9122 COSMIC
COSN29035625 9128 COSMIC
COSN14817841 9169 COSMIC
COSN17909247 9201 COSMIC
COSN16234030 9225 COSMIC
COSN17907952 9229 COSMIC
COSN17080547 9237 COSMIC
COSN2165986 9466 COSMIC
COSN9908774 9815 COSMIC
COSN23609209 10282 COSMIC
COSN25746422 10848 COSMIC
COSN26122185 11010 COSMIC
COSN26392341 11153 COSMIC
COSN30238015 11198 COSMIC
COSN25847066 11224 COSMIC
COSN26621855 11558 COSMIC
COSN23345382 11605 COSMIC
COSN16017864 11786 COSMIC
COSN17591107 11859 COSMIC
COSN20971066 12001 COSMIC
COSN7886241 12100 COSMIC
COSN23663337 12307 COSMIC
COSN27108282 12357 COSMIC
COSN20391803 12388 COSMIC
COSN7886238 12543 COSMIC
COSN27729190 12616 COSMIC
COSN4859741 13271 COSMIC
COSN26385180 13466 COSMIC
COSN28905469 13897 COSMIC
COSN2165972 13970 COSMIC
COSN9796741 14542 COSMIC
COSN22484852 14650 COSMIC
COSN7886230 14728 COSMIC
COSN17767440 14760 COSMIC
COSN16551419 15458 COSMIC
COSN6323719 15892 COSMIC
COSN25985737 16401 COSMIC
COSN2165965 16593 COSMIC
COSN20427660 17601 COSMIC
COSN16056874 17669 COSMIC
COSN14655635 18235 COSMIC
COSN21086360 18652 COSMIC
COSN20782019 18684 COSMIC
COSN25868643 19074 COSMIC
COSN9796720 19114 COSMIC
COSN27651614 19171 COSMIC
COSN23797397 19945 COSMIC
COSN9796709 20086 COSMIC
COSN21425182 20248 COSMIC
COSN6323705 20298 COSMIC
COSN4955891 20338 COSMIC
COSN2165952 20601 COSMIC
COSN27908725 20724 COSMIC
COSN21836512 21131 COSMIC
COSN224667 21452 COSMIC
COSN26209407 21854 COSMIC
COSN29282333 22131 COSMIC
COSN26693570 22711 COSMIC
COSN14784098 22772 COSMIC
COSN9312602 23481 COSMIC
COSN6323692 24073 COSMIC
COSN24319325 24385 COSMIC
COSN23720883 24868 COSMIC
COSN29458168 25007 COSMIC
COSN2165928 25505 COSMIC
COSN21577247 26002 COSMIC
COSN18764422 26060 COSMIC
COSN20495420 26079 COSMIC
COSN27290309 26083 COSMIC
COSN27341228 26083 COSMIC
COSN27449513 26083 COSMIC
COSN29519536 26284 COSMIC
COSN27618006 26633 COSMIC
COSN21068304 26741 COSMIC
COSN16932221 26936 COSMIC
COSN20862687 26948 COSMIC
COSN9796674 27139 COSMIC
COSN20306104 27591 COSMIC
COSN26320361 27686 COSMIC
COSN26673018 27884 COSMIC
COSN29979275 27923 COSMIC
COSN17770308 27929 COSMIC
COSN5811078 28009 COSMIC
COSN32191876 28034 COSMIC
COSN5856168 28441 COSMIC
COSN5811077 28454 COSMIC
COSN32191875 28601 COSMIC
COSN26768816 28675 COSMIC
COSN5811075 28764 COSMIC
COSN21619090 28822 COSMIC
COSN32191874 28914 COSMIC
COSN15242411 29322 COSMIC
COSN5811074 29467 COSMIC
COSN5811073 29515 COSMIC
COSN5631877 29946 COSMIC
COSN24797168 30018 COSMIC
COSN24725966 30036 COSMIC
COSN16741603 30086 COSMIC
COSN5811072 30191 COSMIC
COSN9796662 30215 COSMIC
COSN4920157 30325 COSMIC
COSN4920156 30379 COSMIC
COSN7886166 30440 COSMIC
COSN20462567 30442 COSMIC
COSN29410066 30654 COSMIC
COSN20200721 30694 COSMIC
COSN31661731 30761 COSMIC
COSN5811071 30797 COSMIC
COSN9796657 30966 COSMIC
COSN1334301 31663 COSMIC
COSN5811070 31924 COSMIC
COSN27284410 31945 COSMIC
COSN5088929 31949 COSMIC
COSN5088928 31950 COSMIC
COSN5811069 32560 COSMIC
COSN6323667 32982 COSMIC
COSN7886151 33219 COSMIC
COSN24699564 33253 COSMIC
COSN7886150 33306 COSMIC
COSN63054 33453 COSMIC
COSN6591233 33579 COSMIC
COSN17572174 33732 COSMIC
COSN27484709 33870 COSMIC
COSN26846830 34205 COSMIC
COSN29212486 34319 COSMIC
COSN1334298 34641 COSMIC
COSN19693973 34651 COSMIC
COSM7351897 34687 COSMIC
COSM3430740 34710 COSMIC
COSM5568834 34710 COSMIC
COSM8416851 34712 COSMIC
COSM6174365 34716 COSMIC
COSM1487838 34719 COSMIC
COSN26983318 34757 COSMIC
COSN31539999 34761 COSMIC
COSN14232887 34762 COSMIC
COSN5273259 34763 COSMIC
COSN30101497 34782 COSMIC
COSN19728721 34785 COSMIC
COSN31493285 34787 COSMIC
COSN30179438 34788 COSMIC
COSN30490666 34796 COSMIC
COSN31491806 34816 COSMIC
COSN28135399 34838 COSMIC
COSN31569611 34853 COSMIC
COSN26983319 34858 COSMIC
COSN30515477 34913 COSMIC
COSN31516769 34975 COSMIC
COSN5811068 35217 COSMIC
COSN5811067 35279 COSMIC
COSN31484101 35283 COSMIC
COSN1334297 35516 COSMIC
COSN32063262 35572 COSMIC
COSN31570681 35577 COSMIC
COSN9796635 35600 COSMIC
COSN16403939 35615 COSMIC
rs75995699 3557 GWAS
rs466837 6711 GWAS
rs393628 35294 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1325996326 9 dbSNP
rs1313677237 10 dbSNP
rs764800709 14 dbSNP
rs1255246397 16 dbSNP
rs1416904504 17 dbSNP
rs1209531221 18 dbSNP
rs1339469516 19 dbSNP
rs1004995461 20 dbSNP
rs1282422032 26 dbSNP
rs1446560250 33 dbSNP
rs761627372 38 dbSNP
rs1210887209 44 dbSNP
rs1312083814 48 dbSNP
rs1238022533 57 dbSNP
rs1268871814 59 dbSNP
rs1437879527 60 dbSNP
rs1366818040 66 dbSNP
rs886585780 69 dbSNP
rs115753803 71 dbSNP
rs938178133 80 dbSNP
rs1405316294 85 dbSNP
rs1439739869 90 dbSNP
rs905592944 92 dbSNP
rs1361424452 98 dbSNP
rs930883572 107 dbSNP
rs186123998 110 dbSNP
rs1325289161 115 dbSNP
rs1405684430 127 dbSNP
rs900728163 135 dbSNP
rs774667825 144 dbSNP
rs1336487931 149 dbSNP
rs1039262647 153 dbSNP
rs944353387 158 dbSNP
rs1278054207 163 dbSNP
rs930987003 165 dbSNP
rs911571961 172 dbSNP
rs557683186 174 dbSNP
rs1280767531 180 dbSNP
rs918287569 185 dbSNP
rs1201621000 196 dbSNP
rs1053267203 201 dbSNP
rs1242437839 206 dbSNP
rs147002248 211 dbSNP
rs1183682087 213 dbSNP
rs1230852144 218 dbSNP
rs399120 221 dbSNP
rs445204 224 dbSNP
rs142343243 225 dbSNP
rs1467772314 228 dbSNP
rs1176413158 229 dbSNP
rs138253566 245 dbSNP
rs1401637453 254 dbSNP
rs558922964 256 dbSNP
rs953906484 261 dbSNP
rs773773008 266 dbSNP
rs1335422719 267 dbSNP
rs979523391 268 dbSNP
rs960681732 281 dbSNP
rs9504351 289 dbSNP
rs1343780015 293 dbSNP
rs147072741 303 dbSNP
rs1222788715 309 dbSNP
rs1318459523 313 dbSNP
rs950863017 315 dbSNP
rs1028160704 319 dbSNP
rs1270546661 321 dbSNP
rs1436864167 323 dbSNP
rs1013600045 325 dbSNP
rs1270581426 331 dbSNP
rs896705664 334 dbSNP
rs569664553 335 dbSNP
rs776899351 340 dbSNP
rs900698717 342 dbSNP
rs1467598992 347 dbSNP
rs1272922531 358 dbSNP
rs760392615 362 dbSNP
rs1002359926 364 dbSNP
rs1325832603 365 dbSNP
rs548060261 372 dbSNP
rs529872939 373 dbSNP
rs890102520 378 dbSNP
rs1052830816 379 dbSNP
rs1232845329 381 dbSNP
rs1365072325 387 dbSNP
rs934400521 392 dbSNP
rs1276309427 393 dbSNP
rs565553943 395 dbSNP
rs549302607 410 dbSNP
rs1338574679 412 dbSNP
rs1210192972 415 dbSNP
rs140496815 420 dbSNP
rs1043203035 424 dbSNP
rs1305931183 426 dbSNP
rs536095024 427 dbSNP
rs1037077828 429 dbSNP
rs943737716 432 dbSNP
rs912462717 442 dbSNP
rs948504966 443 dbSNP
rs1165815044 448 dbSNP
rs1473351601 448 dbSNP
rs532243548 449 dbSNP
rs932481250 467 dbSNP
rs1424191426 468 dbSNP
rs925075891 482 dbSNP
rs979240896 490 dbSNP
rs1427334111 494 dbSNP
rs915774695 518 dbSNP
rs967166207 526 dbSNP
rs1245211576 531 dbSNP
rs1316195127 535 dbSNP
rs564819848 543 dbSNP
rs992723998 550 dbSNP
rs768964757 559 dbSNP
rs992549654 560 dbSNP
rs1469787423 562 dbSNP
rs1356846990 572 dbSNP
rs927947314 577 dbSNP
rs1250122721 579 dbSNP