miRTarBase - #MIRT458931


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pre-miRNA Information
pre-miRNA hsa-mir-3689d-1   
Genomic Coordinates chr9: 134849609 - 134849682
Description Homo sapiens miR-3689d-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3689d-2   
Genomic Coordinates chr9: 134850277 - 134850356
Description Homo sapiens miR-3689d-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3689d
Sequence 2| GGGAGGUGUGAUCUCACACUCG |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551722268 8 dbSNP
rs143142996 8 dbSNP
rs1236297052 12 dbSNP
rs573148947 14 dbSNP
rs1210004979 14 dbSNP
rs1217460444 14 dbSNP
rs762590109 18 dbSNP
rs574332265 18 dbSNP
rs1164353021 21 dbSNP
rs963741171 21 dbSNP
rs1177416877 22 dbSNP
rs765777344 22 dbSNP
Putative Targets

Gene Information
Gene Symbol SAMD4B   
Synonyms SMGB, Smaug2
Description sterile alpha motif domain containing 4B
Transcript NM_018028   
Expression
Putative miRNA Targets on SAMD4B
3'UTR of SAMD4B
(miRNA target sites are highlighted)		 
>SAMD4B|NM_018028|3'UTR
   1 CGGGACCCACAGCCCAGCGCACCCATAGGCTCCCTGGGCGGCGGGCGGGGGCCAACCCCCAACGGGCTTCTCCGCGACAG
  81 CGAGAGGGTGGGCTGGCTCAGCTATATATTCTAATATTTTTCTACTCTCTTACCCTCTTAACTTTTGTTTAACATTGGCA
 161 CATGCCTTGCTCACTCCCAGGCCCGTCGAGGGATCTCTGCTGAGGCCCGGGGAGTTGGGGGCAGCCAGGATAAAGGGGGC
 241 AGGGACTGGCCAGACTGCCTGCCTCTCTCCTTTCCTTCCTCATCCCCACCTGGTCCCATCCCACCCCTGCCTCCTCCAGA
 321 CCGCTGACCACCTGCCTCTCCCCAAGGGAGCAGACTCCCCAGAGACAAACTGACCACTACCTTGTGGAGCCTGCTCAGAA
 401 ACATTTGACATTTGGGGTGACGCGCAGGGCAGAGAACCTGCCCTCCAGAATGTTATTGAGAGGAGCTGGGGAGAAGGAAG
 481 GGGAGCAAGGAGAGGAAGCTCTCTCTCCTCTCCCTGCTTCCCCTTCACCATTCCCCACATTCTGCAAGGACAGGAGCCAC
 561 CTTCCTCTCTCTCACCTCCCCTGGCCCTGTTCACCAGAGGTTCTCTATGATTAATTTCTTAGGCCTATTTAAGATACATA
 641 TTTATATAGTTCTTAACGGTTTTTCTCTGATCATTTCCTCTCATTTTTAGAATCCCCAGGTCTCTCTCAGCCAAGACAGT
 721 GGCAGGGAGAGCCTGAACTTTATGAGGGGAGAGGGCAGAGCCCCCTCCTCCAGACCCTCAAGCTCTAACCCATTTTCCTC
 801 CAGCCCTGGCTACCCGGATGAAGAGGTTGGAGGTGGGCAGCCAGGGTAGCCAGTGAGGTCAGGAAGTCTGTTGCCTTAAC
 881 GTCCCCTTCCCCACGAACACACACCCTTCTCCGCTCCCAGGTCTGGTTGGTGAGACTTGGGAGTCAGGAATAAGGGAAAG
 961 GGGATTGTTTGGTTTTTGGGTTTTTCCCTAAGCCCCTCCCTTTTCTTTCAGCCTTTTTCCTTCCCCCATTATGTCATGAC
1041 CTCACTTAAGTGGAACACTATATCATAACCCAGAGATTCGTCCCAGCCCCAGAGTCCGACAGACTGTCTGGTCCCTATTC
1121 CTAATGAGGGGTTGTGTTGGGGCCCAGGTGGAGGGAGGGGATTTGGGGGTTCAGACTGCGGGGAAGCCAGGGTCTCCCTC
1201 TTCAACGCCCTCCTCCCCCTCAACCCACCTTCCCAACTGGGACATTCTCAAGCTTTTCACACCGAAAAGGAAAAAAAATG
1281 TTATTTTTAGATACATTTTATGAATAACTTTTGTTATGAATATGGCTGGTAACCATTGTGTATGTTATTAAAGATACAAA
1361 ATGTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     || ||||||| 
Target 5' accttcctctcTCTCACCTCCc 3'
 559 - 580 147.00 -16.40
2 
miRNA  3' gcucacacucUAGUGUGGAGGg 5'
                    | | |||||:| 
Target 5' cctccccctcAACCCACCTTCc 3'
 1212 - 1233 128.00 -12.90
3 
miRNA  3' gcUCACAC-UCUAGUGUGGAGGg 5'
            || | | ||| | | ||||| 
Target 5' ggAGAGGGCAGAGC-CCCCTCCt 3'
 748 - 769 123.00 -17.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30500069 3 COSMIC
COSN26993730 10 COSMIC
COSN28847781 30 COSMIC
COSN30478894 33 COSMIC
COSN30642955 40 COSMIC
COSN28749651 42 COSMIC
COSN26993729 43 COSMIC
COSN31532844 64 COSMIC
COSN26993731 75 COSMIC
COSN31498356 77 COSMIC
COSN30457585 83 COSMIC
COSN31486328 85 COSMIC
COSN30756192 143 COSMIC
COSN30126737 159 COSMIC
COSN32070642 188 COSMIC
COSN32070643 199 COSMIC
COSN28877437 243 COSMIC
COSN5802194 425 COSMIC
COSN31540156 579 COSMIC
COSN31606657 619 COSMIC
COSN1215481 854 COSMIC
COSN32056009 1181 COSMIC
COSN7126722 1183 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs372726169 2 dbSNP
rs751065965 3 dbSNP
rs770545995 4 dbSNP
rs1369569357 6 dbSNP
rs1359791731 11 dbSNP
rs376021198 18 dbSNP
rs571961567 19 dbSNP
rs752206859 20 dbSNP
rs762425347 23 dbSNP
rs767425225 26 dbSNP
rs750887873 32 dbSNP
rs1162507256 36 dbSNP
rs750581276 37 dbSNP
rs113782061 40 dbSNP
rs766562882 41 dbSNP
rs370612551 43 dbSNP
rs555706421 44 dbSNP
rs1180146361 47 dbSNP
rs371533253 48 dbSNP
rs1320344150 49 dbSNP
rs1252827328 50 dbSNP
rs758394266 53 dbSNP
rs1457773481 61 dbSNP
rs1320111513 62 dbSNP
rs893080045 63 dbSNP
rs757609205 64 dbSNP
rs942855390 65 dbSNP
rs1229200198 70 dbSNP
rs1010540546 74 dbSNP
rs1020187996 75 dbSNP
rs974198909 76 dbSNP
rs547795715 82 dbSNP
rs971827942 83 dbSNP
rs1308102610 89 dbSNP
rs1443972972 90 dbSNP
rs750311470 97 dbSNP
rs919714003 105 dbSNP
rs1322672925 111 dbSNP
rs1405698153 114 dbSNP
rs1415879102 117 dbSNP
rs1034881219 125 dbSNP
rs1472215789 126 dbSNP
rs1447936856 133 dbSNP
rs573930366 134 dbSNP
rs746827981 135 dbSNP
rs770726763 136 dbSNP
rs761233629 137 dbSNP
rs776249741 142 dbSNP
rs1222781483 144 dbSNP
rs1352504884 146 dbSNP
rs745557579 147 dbSNP
rs769514346 148 dbSNP
rs775145675 154 dbSNP
rs1434556119 155 dbSNP
rs1186763304 156 dbSNP
rs1243625976 158 dbSNP
rs1446252068 159 dbSNP
rs762550050 161 dbSNP
rs1379970779 166 dbSNP
rs930239128 170 dbSNP
rs1160435667 177 dbSNP
rs1224917131 181 dbSNP
rs544631775 182 dbSNP
rs1413931788 184 dbSNP
rs562963578 185 dbSNP
rs755849651 186 dbSNP
rs944406673 188 dbSNP
rs533512209 189 dbSNP
rs900257381 193 dbSNP
rs1334875447 208 dbSNP
rs754088929 209 dbSNP
rs1280864515 210 dbSNP
rs1342286158 219 dbSNP
rs1199346463 220 dbSNP
rs905082074 221 dbSNP
rs1000655322 222 dbSNP
rs1054303217 223 dbSNP
rs1196586298 225 dbSNP
rs1237336857 229 dbSNP
rs755229356 231 dbSNP
rs1184278350 232 dbSNP
rs1405790219 232 dbSNP
rs545572591 236 dbSNP
rs1376092760 237 dbSNP
rs1032132492 238 dbSNP
rs560678482 239 dbSNP
rs1409021595 241 dbSNP
rs766106869 242 dbSNP
rs1331190868 245 dbSNP
rs1397677266 247 dbSNP
rs1277279484 248 dbSNP
rs1393447962 251 dbSNP
rs1330506004 254 dbSNP
rs1010054130 258 dbSNP
rs1042067335 262 dbSNP
rs753403273 264 dbSNP
rs1365846585 268 dbSNP
rs1290503219 274 dbSNP
rs1003293221 282 dbSNP
rs1358727573 288 dbSNP
rs1005007540 304 dbSNP
rs1161713225 308 dbSNP
rs1436867107 310 dbSNP
rs955415821 312 dbSNP
rs1409811251 313 dbSNP
rs527953350 320 dbSNP
rs760702766 321 dbSNP
rs964287083 323 dbSNP
rs974274170 324 dbSNP
rs1360843637 328 dbSNP
rs1014995717 331 dbSNP
rs1483206165 332 dbSNP
rs1254954328 335 dbSNP
rs920081002 337 dbSNP
rs1445460242 338 dbSNP
rs1302082278 342 dbSNP
rs1373843971 344 dbSNP
rs1034273537 354 dbSNP
rs958800329 358 dbSNP
rs1394263934 360 dbSNP
rs1349318293 361 dbSNP
rs1378315420 362 dbSNP
rs929740774 375 dbSNP
rs549432690 377 dbSNP
rs1416654253 385 dbSNP
rs1368950272 387 dbSNP
rs192191869 392 dbSNP
rs566173270 408 dbSNP
rs917627814 412 dbSNP
rs77539404 422 dbSNP
rs1208402484 423 dbSNP
rs147919375 424 dbSNP
rs912816280 425 dbSNP
rs1188055174 434 dbSNP
rs1486334796 447 dbSNP
rs1248973555 449 dbSNP
rs753220231 453 dbSNP
rs549405797 454 dbSNP
rs183135492 457 dbSNP
rs1472274630 461 dbSNP
rs1252908180 471 dbSNP
rs1191854835 472 dbSNP
rs1053579760 477 dbSNP
rs1321075574 478 dbSNP
rs976173931 480 dbSNP
rs892280092 487 dbSNP
rs921571641 488 dbSNP
rs1348768561 494 dbSNP
rs931624154 495 dbSNP
rs1412662899 500 dbSNP
rs1410711503 502 dbSNP
rs1398848423 503 dbSNP
rs1009790457 508 dbSNP
rs1175320392 514 dbSNP
rs758967208 517 dbSNP
rs1369564374 519 dbSNP
rs1054230945 528 dbSNP
rs778235797 531 dbSNP
rs891166482 552 dbSNP
rs945905723 565 dbSNP
rs1041517603 570 dbSNP
rs1252174708 576 dbSNP
rs867850219 580 dbSNP
rs1436521261 584 dbSNP
rs1488000593 585 dbSNP
rs1273564457 597 dbSNP
rs1215555489 599 dbSNP
rs1276127322 608 dbSNP
rs1364940639 611 dbSNP
rs907116660 611 dbSNP
rs1002769535 613 dbSNP
rs1055732701 619 dbSNP
rs1391991116 628 dbSNP
rs1328310630 635 dbSNP
rs1456163343 640 dbSNP
rs1388491453 649 dbSNP
rs894506910 651 dbSNP
rs1470137142 656 dbSNP
rs995446525 657 dbSNP
rs1008271110 658 dbSNP
rs951464192 659 dbSNP
rs1207763380 663 dbSNP
rs1272673409 668 dbSNP
rs1195242297 670 dbSNP
rs1018280838 672 dbSNP
rs747446880 678 dbSNP
rs964319977 683 dbSNP
rs1353009718 684 dbSNP
rs79187519 690 dbSNP
rs76996310 691 dbSNP
rs995742915 703 dbSNP
rs1232863793 712 dbSNP
rs1331881719 721 dbSNP
rs538347174 724 dbSNP
rs960728150 729 dbSNP
rs1019759265 736 dbSNP
rs1433292150 739 dbSNP
rs1322214779 747 dbSNP
rs966029875 749 dbSNP
rs1027628052 752 dbSNP
rs1248494449 763 dbSNP
rs1477118273 765 dbSNP
rs187814571 768 dbSNP
rs951592725 769 dbSNP
rs975691246 770 dbSNP
rs921497665 772 dbSNP
rs796431803 776 dbSNP
rs36270 779 dbSNP
rs917674689 786 dbSNP
rs1451026411 787 dbSNP
rs1448632462 791 dbSNP
rs970879564 799 dbSNP
rs1166515781 804 dbSNP
rs980438180 813 dbSNP
rs945776359 816 dbSNP
rs1041959222 817 dbSNP
rs938497784 822 dbSNP
rs1271130180 826 dbSNP
rs558744482 828 dbSNP
rs754029238 835 dbSNP
rs1325164032 838 dbSNP
rs536477280 841 dbSNP
rs1347608173 844 dbSNP
rs1407563074 847 dbSNP
rs1053648131 850 dbSNP
rs913774530 852 dbSNP
rs1323997559 854 dbSNP
rs1435201912 858 dbSNP
rs945232785 861 dbSNP
rs1175190084 871 dbSNP
rs1427420677 874 dbSNP
rs554553583 881 dbSNP
rs1168262894 882 dbSNP
rs891244762 895 dbSNP
rs576329003 896 dbSNP
rs1295894683 897 dbSNP
rs1339180235 906 dbSNP
rs1168512465 907 dbSNP
rs370477282 913 dbSNP
rs1292355396 914 dbSNP
rs1274207411 915 dbSNP
rs1216641837 917 dbSNP
rs1449874645 922 dbSNP
rs1284063260 952 dbSNP
rs1020106973 955 dbSNP
rs901364997 964 dbSNP
rs1314149057 966 dbSNP
rs997014639 972 dbSNP
rs1231040585 974 dbSNP
rs1353515257 978 dbSNP
rs1039753558 989 dbSNP
rs1411386253 995 dbSNP
rs1248525443 1013 dbSNP
rs141754139 1020 dbSNP
rs1162647001 1029 dbSNP
rs770006585 1046 dbSNP
rs1475490539 1049 dbSNP
rs1420161467 1057 dbSNP
rs1389288758 1061 dbSNP
rs1472399027 1063 dbSNP
rs1473043055 1071 dbSNP
rs1027243978 1080 dbSNP
rs1233626946 1081 dbSNP
rs1207080927 1090 dbSNP
rs1450303002 1092 dbSNP
rs190334079 1099 dbSNP
rs1337560559 1104 dbSNP
rs763944908 1106 dbSNP
rs1226001095 1110 dbSNP
rs545535649 1112 dbSNP
rs1347968603 1114 dbSNP
rs1443903165 1114 dbSNP
rs967545243 1121 dbSNP
rs1461943088 1124 dbSNP
rs1396537215 1137 dbSNP
rs1159303496 1153 dbSNP
rs1004421555 1154 dbSNP
rs977224301 1156 dbSNP
rs1025554080 1160 dbSNP
rs1456712493 1161 dbSNP
rs970480007 1163 dbSNP
rs560640005 1166 dbSNP
rs1477144404 1169 dbSNP
rs1246538730 1170 dbSNP
rs926349953 1180 dbSNP
rs572523932 1181 dbSNP
rs182893669 1193 dbSNP
rs375917637 1207 dbSNP
rs1315877311 1208 dbSNP
rs1284345362 1215 dbSNP
rs915832491 1217 dbSNP
rs913859714 1218 dbSNP
rs1354546045 1219 dbSNP
rs945278995 1220 dbSNP
rs1268827465 1225 dbSNP
rs1429933838 1227 dbSNP
rs1048397430 1229 dbSNP
rs775644806 1237 dbSNP
rs911697207 1241 dbSNP
rs1394659826 1250 dbSNP
rs763111585 1260 dbSNP
rs1174657281 1264 dbSNP
rs1442730699 1265 dbSNP
rs1189372481 1270 dbSNP
rs1486463598 1271 dbSNP
rs939998479 1271 dbSNP
rs561413612 1272 dbSNP
rs1217251745 1277 dbSNP
rs899886033 1278 dbSNP
rs375170574 1280 dbSNP
rs901245980 1295 dbSNP
rs1413522771 1296 dbSNP
rs1455239369 1306 dbSNP
rs997026085 1309 dbSNP
rs1157507621 1310 dbSNP
rs1384874505 1318 dbSNP
rs772202618 1321 dbSNP
rs751509287 1323 dbSNP
rs916546600 1331 dbSNP
rs1290739507 1338 dbSNP
rs532076426 1354 dbSNP
rs1445826160 1355 dbSNP
rs1375081073 1358 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     || ||||||| 
Target 5' accuuccucucUCUCACCUCCc 3'
 		3 - 24
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000314471.6 | 3UTR | CCACCUUCCUCUCUCUCACCUCCCCUGGCCCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
231 hsa-miR-3689d Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059166 TXNIP thioredoxin interacting protein 2 4
MIRT080699 KIAA1468 KIAA1468 2 2
MIRT218770 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT278059 KHNYN KH and NYN domain containing 2 2
MIRT345933 EIF4A1 eukaryotic translation initiation factor 4A1 2 2
MIRT366238 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT449689 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT451149 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451266 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT451375 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451570 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451585 HIRIP3 HIRA interacting protein 3 2 2
MIRT451614 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451763 ZNF611 zinc finger protein 611 2 6
MIRT452383 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452573 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452735 PTGES3L prostaglandin E synthase 3 like 2 6
MIRT452867 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452975 CABP4 calcium binding protein 4 2 2
MIRT453215 CERS1 ceramide synthase 1 2 2
MIRT453259 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453449 GLG1 golgi glycoprotein 1 2 2
MIRT453479 PITPNM3 PITPNM family member 3 2 2
MIRT453663 CD207 CD207 molecule 2 6
MIRT453724 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453760 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT454181 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454330 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT454338 CDKL1 cyclin dependent kinase like 1 2 2
MIRT454427 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454665 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454825 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT455130 TBC1D25 TBC1 domain family member 25 2 2
MIRT455166 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455416 RXRB retinoid X receptor beta 2 2
MIRT455668 GLO1 glyoxalase I 2 2
MIRT455999 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456446 TMEM81 transmembrane protein 81 2 2
MIRT456642 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT456728 TMEM239 transmembrane protein 239 2 2
MIRT457131 ASPH aspartate beta-hydroxylase 2 2
MIRT457157 MXRA7 matrix remodeling associated 7 2 2
MIRT457358 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457458 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457619 UPK3BL uroplakin 3B like 1 2 2
MIRT457692 ZNF587 zinc finger protein 587 2 2
MIRT457727 SMOX spermine oxidase 2 2
MIRT457788 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457875 THEM6 thioesterase superfamily member 6 2 4
MIRT457909 ZNF212 zinc finger protein 212 2 2
MIRT458395 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT458496 MARVELD2 MARVEL domain containing 2 2 2
MIRT458544 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT458577 TCOF1 treacle ribosome biogenesis factor 1 2 2
MIRT458732 CES2 carboxylesterase 2 2 2
MIRT458814 ZNF843 zinc finger protein 843 2 2
MIRT458931 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459341 ZNF17 zinc finger protein 17 2 2
MIRT459365 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459572 NLGN2 neuroligin 2 2 2
MIRT460015 DTX3L deltex E3 ubiquitin ligase 3L 2 4
MIRT460144 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460653 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460798 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT461058 KCNK6 potassium two pore domain channel subfamily K member 6 2 4
MIRT461458 SLC19A3 solute carrier family 19 member 3 2 2
MIRT461572 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461927 TNFSF14 TNF superfamily member 14 2 2
MIRT461953 C3 complement C3 2 2
MIRT462278 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT462744 EFNB1 ephrin B1 2 2
MIRT463136 ZNF451 zinc finger protein 451 2 4
MIRT463566 ZBTB39 zinc finger and BTB domain containing 39 2 6
MIRT463866 WNT7B Wnt family member 7B 2 2
MIRT464326 UST uronyl 2-sulfotransferase 2 2
MIRT464796 UBE2F ubiquitin conjugating enzyme E2 F (putative) 2 2
MIRT465034 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT466207 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT467007 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467029 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT468001 SKI SKI proto-oncogene 2 2
MIRT468031 SIKE1 suppressor of IKBKE 1 2 6
MIRT468575 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT468834 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT468970 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469450 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470888 PLXND1 plexin D1 2 2
MIRT470953 PKM pyruvate kinase, muscle 2 2
MIRT471828 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472590 NACC1 nucleus accumbens associated 1 2 2
MIRT472805 MTMR12 myotubularin related protein 12 2 2
MIRT472818 MTMR10 myotubularin related protein 10 2 6
MIRT472914 MSN moesin 2 2
MIRT474558 KLHDC3 kelch domain containing 3 2 2
MIRT474716 KIF13A kinesin family member 13A 2 6
MIRT475279 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475300 IFNLR1 interferon lambda receptor 1 2 2
MIRT475759 HDLBP high density lipoprotein binding protein 2 2
MIRT475786 HDGF heparin binding growth factor 2 2
MIRT475933 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476212 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT476238 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 4
MIRT476799 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477988 DNAL1 dynein axonemal light chain 1 2 2
MIRT478317 DDN dendrin 2 2
MIRT479257 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479344 CEP97 centrosomal protein 97 2 2
MIRT479522 CDCA4 cell division cycle associated 4 2 2
MIRT479906 CCDC117 coiled-coil domain containing 117 2 6
MIRT481147 AVL9 AVL9 cell migration associated 2 6
MIRT481735 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482089 ALG8 ALG8, alpha-1,3-glucosyltransferase 2 2
MIRT482389 AEN apoptosis enhancing nuclease 2 2
MIRT483093 TFPI tissue factor pathway inhibitor 2 2
MIRT484246 ANK1 ankyrin 1 2 2
MIRT484342 EPN1 epsin 1 2 4
MIRT489141 C5orf38 chromosome 5 open reading frame 38 2 2
MIRT489163 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489547 SOX11 SRY-box 11 2 4
MIRT489780 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489799 KRT80 keratin 80 2 6
MIRT490535 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT492198 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492283 SHISA6 shisa family member 6 2 4
MIRT501059 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT501094 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503870 CBS cystathionine-beta-synthase 2 2
MIRT507981 BCL2L13 BCL2 like 13 2 4
MIRT508125 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT508205 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508385 SPTBN2 spectrin beta, non-erythrocytic 2 2 4
MIRT510308 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT510462 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512227 ATXN3 ataxin 3 2 8
MIRT512665 STEAP3 STEAP3 metalloreductase 2 2
MIRT514184 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT515053 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515138 ZNF799 zinc finger protein 799 2 4
MIRT515452 ZNF747 zinc finger protein 747 2 2
MIRT515791 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT515905 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT516129 MRPS16 mitochondrial ribosomal protein S16 2 6
MIRT516679 ZNF860 zinc finger protein 860 2 4
MIRT516750 ZNF100 zinc finger protein 100 2 2
MIRT516971 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT517491 NPAP1 nuclear pore associated protein 1 2 2
MIRT517774 PROM2 prominin 2 2 2
MIRT517938 ZNF431 zinc finger protein 431 2 4
MIRT518386 ZNF250 zinc finger protein 250 2 2
MIRT520621 TMEM41B transmembrane protein 41B 2 2
MIRT521028 SLC30A5 solute carrier family 30 member 5 2 2
MIRT521454 RAD51 RAD51 recombinase 2 2
MIRT521564 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT521581 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT522263 NKRF NFKB repressing factor 2 2
MIRT522410 MXI1 MAX interactor 1, dimerization protein 2 2
MIRT522543 MED28 mediator complex subunit 28 2 6
MIRT522915 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT523029 IGF1 insulin like growth factor 1 2 2
MIRT523854 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT524184 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524520 CDK19 cyclin dependent kinase 19 2 2
MIRT524674 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT530257 ZNF620 zinc finger protein 620 2 2
MIRT540691 BMP3 bone morphogenetic protein 3 2 2
MIRT540976 C17orf85 nuclear cap binding subunit 3 2 2
MIRT545505 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT545631 GGCX gamma-glutamyl carboxylase 2 2
MIRT547358 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT550701 MPL MPL proto-oncogene, thrombopoietin receptor 2 4
MIRT550717 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551203 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT553999 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT561081 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT563523 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT564463 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565233 TRAF6 TNF receptor associated factor 6 2 2
MIRT566618 NKAP NFKB activating protein 2 2
MIRT569527 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569639 QPCT glutaminyl-peptide cyclotransferase 2 2
MIRT570253 SSPN sarcospan 2 2
MIRT570570 OTUD7B OTU deubiquitinase 7B 2 2
MIRT570621 MTF2 metal response element binding transcription factor 2 2 2
MIRT571098 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 2
MIRT575196 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575554 Cd99 CD99 antigen 2 2
MIRT575634 Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like 2 2
MIRT608267 NOP14 NOP14 nucleolar protein 2 2
MIRT609314 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT627670 RPL28 ribosomal protein L28 2 2
MIRT631185 TSPAN14 tetraspanin 14 2 2
MIRT631964 YIPF5 Yip1 domain family member 5 2 2
MIRT632885 GINM1 glycoprotein integral membrane 1 2 2
MIRT642618 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT645609 TSPAN6 tetraspanin 6 2 2
MIRT662227 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662329 MYLK3 myosin light chain kinase 3 2 2
MIRT662725 LRRC3C leucine rich repeat containing 3C 2 2
MIRT665520 USP14 ubiquitin specific peptidase 14 2 2
MIRT666634 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT668969 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT670925 DESI1 desumoylating isopeptidase 1 2 2
MIRT673939 ZNF500 zinc finger protein 500 2 2
MIRT674675 PLCE1 phospholipase C epsilon 1 2 2
MIRT675230 MAK male germ cell associated kinase 2 2
MIRT680864 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT681047 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681105 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT683553 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684508 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684812 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT685981 CCDC77 coiled-coil domain containing 77 2 2
MIRT686709 TBC1D19 TBC1 domain family member 19 2 2
MIRT686867 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688908 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT691208 KLHL30 kelch like family member 30 2 2
MIRT692298 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT694380 MTA1 metastasis associated 1 2 2
MIRT696497 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT700686 POLR3D RNA polymerase III subunit D 2 2
MIRT701088 PAPOLG poly(A) polymerase gamma 2 2
MIRT703373 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT706189 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT706648 SMIM19 small integral membrane protein 19 2 2
MIRT709466 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT709699 DMWD DM1 locus, WD repeat containing 2 2
MIRT710693 LYRM4 LYR motif containing 4 2 2
MIRT713457 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT722409 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
MIRT725391 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT725548 DNMT3A DNA methyltransferase 3 alpha 2 2

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