pre-miRNA Information
pre-miRNA hsa-mir-3123   
Genomic Coordinates chr1: 241132272 - 241132346
Description Homo sapiens miR-3123 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3123
Sequence 49| CAGAGAAUUGUUUAAUC |65
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 1 + 241132323 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1453759221 1 dbSNP
rs968575171 5 dbSNP
rs979407933 9 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MRPS21   
Synonyms MDS016, MRP-S21, RPMS21
Description mitochondrial ribosomal protein S21
Transcript NM_018997   
Other Transcripts NM_031901   
Expression
Putative miRNA Targets on MRPS21
3'UTR of MRPS21
(miRNA target sites are highlighted)
>MRPS21|NM_018997|3'UTR
   1 GGCCTGTGGGTGGGACACCCAGTGCGAAACCCTCATCCAGTTTTCTCTCCATCTCTTTTCTTTGTACAATCCCATTTCCT
  81 ATTACCATTCTCTGCAATAAACTCAAATCACATGTCTGCAAGAAGGCCTCCAAATATAGAAACAATCCCATTAGTCAGCA
 161 GTGGACCCTGTCTTTTATTAAGTGAAAGAAGAAACTGAGTCTGAAAGTACTCTAGGAGTAGAATGGTATTTGCCAGGGAC
 241 TGGAGGAGGGGGCAGTGAGGAGTTATTGTTTAATGGGTACAGAGTTTCAGTTTGGGCAGATGAAAAAGTTCAGGAGACGA
 321 TGGCCTGGCATGGTGGCTCACGCCTGTTATCCCAACACTTTGGGAGGCTGAGGCGGGCGGCTCACTTGAGGCCAGGAGTT
 401 TGAGACCAGCTTGGCCAATGTGGTGAAACCCCATCTCTACTAAAAATACAAAAAAAAATTGGCCGGGCGTGGTGGTGCAC
 481 GCCTGTAATCCCAGATACTTGGGTGGCTGAGGCAGGAGAATTGCTTGAACTGGGGAGGAAGAGGTTGCAGTGAGCCAAGA
 561 TCATGCCACTGCACTCCAACCTGGGCGACAGAGTGAGACTCCATCTCAAAACAAAAAAACGGAGATGGATGATGAATGGT
 641 GATGGCGGTTGCTCAAAAAGTTGAATGTACTTAATGCCACTGAACTATACCCTTAAATGGTCACGATGGTAAATTTTGTG
 721 TTTTACTACAATAAAAACTTTTTTGAAAGTCAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cuaauuUGUUAAGAGAc 5'
                || ||||||| 
Target 5' cctattACCATTCTCTg 3'
78 - 94 147.00 -10.40
2
miRNA  3' cuaauuuguuAAGAGAc 5'
                    |||||| 
Target 5' tcatccagttTTCTCTc 3'
33 - 49 120.00 -6.20
3
miRNA  3' cuaauuuguuAAGAGAC-- 5'
                    ||||:||  
Target 5' tccatctcttTTCTTTGTA 3'
48 - 66 94.00 -5.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN2375006 3 COSMIC
COSN31560069 5 COSMIC
COSN31601963 22 COSMIC
COSN30102354 27 COSMIC
COSN30157384 35 COSMIC
COSN31612910 41 COSMIC
COSN30492907 48 COSMIC
COSN30473099 73 COSMIC
COSN30149696 91 COSMIC
COSN30517060 95 COSMIC
COSN31562363 128 COSMIC
COSN20074134 140 COSMIC
COSN25198214 344 COSMIC
COSN7176991 375 COSMIC
COSN19734186 465 COSMIC
COSN28595354 489 COSMIC
COSN23822994 510 COSMIC
COSN28566071 529 COSMIC
COSN4900747 580 COSMIC
COSN26550558 706 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs782491112 7 dbSNP
rs1480595405 16 dbSNP
rs201037510 17 dbSNP
rs782562020 18 dbSNP
rs782198706 19 dbSNP
rs1207819540 20 dbSNP
rs782406343 22 dbSNP
rs782041205 23 dbSNP
rs1279940848 25 dbSNP
rs202148475 26 dbSNP
rs781965820 27 dbSNP
rs782047661 31 dbSNP
rs587756882 41 dbSNP
rs1223232169 43 dbSNP
rs11294 44 dbSNP
rs1371164584 47 dbSNP
rs373154531 52 dbSNP
rs901264059 54 dbSNP
rs1410254698 56 dbSNP
rs1374605328 60 dbSNP
rs9913 61 dbSNP
rs998266330 65 dbSNP
rs1310801474 81 dbSNP
rs1047360156 88 dbSNP
rs587638233 98 dbSNP
rs1005505910 103 dbSNP
rs1157753324 105 dbSNP
rs1416779586 110 dbSNP
rs1406473630 112 dbSNP
rs1184939649 113 dbSNP
rs1473176714 123 dbSNP
rs1257295867 127 dbSNP
rs1016868529 131 dbSNP
rs1256794032 138 dbSNP
rs8006 140 dbSNP
rs1002290939 142 dbSNP
rs1228956960 149 dbSNP
rs1034679260 150 dbSNP
rs960762367 151 dbSNP
rs781977577 153 dbSNP
rs587770728 157 dbSNP
rs1402545422 165 dbSNP
rs1287891597 170 dbSNP
rs587672803 181 dbSNP
rs1451056053 196 dbSNP
rs370328051 212 dbSNP
rs1020907408 213 dbSNP
rs1159207571 214 dbSNP
rs587774285 216 dbSNP
rs1458230636 220 dbSNP
rs967529150 239 dbSNP
rs1186319606 241 dbSNP
rs587632964 244 dbSNP
rs1425917137 253 dbSNP
rs978863232 257 dbSNP
rs1257176036 261 dbSNP
rs1186128884 263 dbSNP
rs1484990251 267 dbSNP
rs587721234 268 dbSNP
rs1209365503 278 dbSNP
rs1334088692 279 dbSNP
rs1271181765 285 dbSNP
rs1246806692 286 dbSNP
rs1340819413 287 dbSNP
rs1294523372 289 dbSNP
rs1363551373 291 dbSNP
rs1380199732 291 dbSNP
rs1320651394 293 dbSNP
rs1439499646 294 dbSNP
rs1394475639 300 dbSNP
rs1163361596 302 dbSNP
rs942924895 303 dbSNP
rs1369433016 304 dbSNP
rs975846939 305 dbSNP
rs922608101 317 dbSNP
rs1170139546 319 dbSNP
rs71578480 324 dbSNP
rs1426970513 327 dbSNP
rs1250076294 328 dbSNP
rs1189363159 337 dbSNP
rs1468090325 338 dbSNP
rs1251113630 342 dbSNP
rs934108065 343 dbSNP
rs587598567 346 dbSNP
rs764735933 350 dbSNP
rs1250550910 351 dbSNP
rs1224894047 353 dbSNP
rs1343930104 359 dbSNP
rs1297870361 361 dbSNP
rs1439571361 366 dbSNP
rs113162830 369 dbSNP
rs1368125402 371 dbSNP
rs1047135159 373 dbSNP
rs1389068382 374 dbSNP
rs887156522 375 dbSNP
rs185738687 376 dbSNP
rs1460778778 379 dbSNP
rs781991641 380 dbSNP
rs471464 382 dbSNP
rs1169435362 384 dbSNP
rs905139532 387 dbSNP
rs1393379866 391 dbSNP
rs1002110025 406 dbSNP
rs1452118107 411 dbSNP
rs1249715070 417 dbSNP
rs1193926493 424 dbSNP
rs1483895136 441 dbSNP
rs1035138734 448 dbSNP
rs1276111425 450 dbSNP
rs1362178561 450 dbSNP
rs75856844 459 dbSNP
rs80034820 461 dbSNP
rs1306915016 463 dbSNP
rs587612570 465 dbSNP
rs1009614961 466 dbSNP
rs1020666027 467 dbSNP
rs1308970896 468 dbSNP
rs782049115 469 dbSNP
rs1373795752 474 dbSNP
rs368830938 481 dbSNP
rs1033125835 482 dbSNP
rs1478394282 486 dbSNP
rs1363195443 491 dbSNP
rs1179542010 495 dbSNP
rs587669424 498 dbSNP
rs1252313665 500 dbSNP
rs1209803992 510 dbSNP
rs1484493799 514 dbSNP
rs964667674 521 dbSNP
rs975687486 524 dbSNP
rs1280285565 539 dbSNP
rs580060 540 dbSNP
rs934014508 542 dbSNP
rs587622007 543 dbSNP
rs1227122483 545 dbSNP
rs1352794382 548 dbSNP
rs908645613 561 dbSNP
rs941412977 572 dbSNP
rs1289384919 573 dbSNP
rs1414534140 579 dbSNP
rs1038234609 582 dbSNP
rs905025092 587 dbSNP
rs937961372 588 dbSNP
rs1056394083 589 dbSNP
rs896356252 594 dbSNP
rs1412548505 602 dbSNP
rs782726937 605 dbSNP
rs112416648 608 dbSNP
rs1238887209 613 dbSNP
rs1474102513 613 dbSNP
rs587653425 613 dbSNP
rs1009256427 621 dbSNP
rs1446022749 622 dbSNP
rs34092327 624 dbSNP
rs1281526535 635 dbSNP
rs1209989977 640 dbSNP
rs782162683 647 dbSNP
rs190984342 648 dbSNP
rs1269315823 650 dbSNP
rs1233099445 652 dbSNP
rs1354658773 664 dbSNP
rs1286268939 680 dbSNP
rs71622690 681 dbSNP
rs1033178201 697 dbSNP
rs1437350643 699 dbSNP
rs964237672 705 dbSNP
rs1403449524 706 dbSNP
rs587772010 706 dbSNP
rs997390679 715 dbSNP
rs1029918356 729 dbSNP
rs1163555605 738 dbSNP
rs73013129 742 dbSNP
rs1245798898 746 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions Prostate Tissue
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRX1760632. RNA binding protein: AGO2. Condition:AGO-CLIP-22RV1_C ...

- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.).

Article - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al.
- Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_031901 | 3UTR | UCUCUCCAUCUCUUUUCUUUGUACAAUCCCAUUUCCUAUUACCAUUCUCUGCAAUAAACUCAAAUCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_031901 | 3UTR | CCCAUUUCCUAUUACCAUUCUCUGCAAUAAACUCAAAUCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000309092.7 | 3UTR | UACAAUCCCAUUUCCUAUUACCAUUCUCUGCAAUAAACUCAAAUCACAUGUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
113 hsa-miR-3123 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058369 TBCEL tubulin folding cofactor E like 2 4
MIRT059816 EFNA1 ephrin A1 2 2
MIRT066850 TMEM19 transmembrane protein 19 2 2
MIRT071503 CALM1 calmodulin 1 2 6
MIRT073758 NUBP1 nucleotide binding protein 1 2 2
MIRT074324 TNRC6A trinucleotide repeat containing 6A 2 10
MIRT094805 LMNB1 lamin B1 2 2
MIRT099173 MAP3K4 mitogen-activated protein kinase kinase kinase 4 2 2
MIRT099545 ID4 inhibitor of DNA binding 4, HLH protein 2 2
MIRT122643 E2F3 E2F transcription factor 3 2 2
MIRT180918 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 8
MIRT192844 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT224984 BAG4 BCL2 associated athanogene 4 2 2
MIRT246065 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT357085 PRRC1 proline rich coiled-coil 1 2 2
MIRT378170 C5ORF51 chromosome 5 open reading frame 51 2 2
MIRT441636 KDM5A lysine demethylase 5A 2 2
MIRT441802 BCAS1 breast carcinoma amplified sequence 1 2 2
MIRT443019 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443445 SERPINB4 serpin family B member 4 2 2
MIRT443661 SERPINB3 serpin family B member 3 2 2
MIRT443776 STS steroid sulfatase 2 2
MIRT444663 TSPAN14 tetraspanin 14 2 2
MIRT444924 KIAA1522 KIAA1522 2 2
MIRT445378 FOXO1 forkhead box O1 2 2
MIRT447920 PAIP2B poly(A) binding protein interacting protein 2B 2 2
MIRT449202 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT449713 TSPYL1 TSPY like 1 2 2
MIRT450403 TMEM47 transmembrane protein 47 2 2
MIRT450787 PAPOLG poly(A) polymerase gamma 2 2
MIRT451381 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT452507 WDR1 WD repeat domain 1 2 2
MIRT453264 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT454642 FAM83H family with sequence similarity 83 member H 2 2
MIRT455513 C6orf106 chromosome 6 open reading frame 106 2 2
MIRT456709 LDB1 LIM domain binding 1 2 2
MIRT457231 AP3D1 adaptor related protein complex 3 delta 1 subunit 2 2
MIRT459235 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT460553 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT461424 CTSL2 cathepsin V 2 3
MIRT462869 CYP51A1 cytochrome P450 family 51 subfamily A member 1 2 2
MIRT467178 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT469233 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT474125 LIPC lipase C, hepatic type 2 2
MIRT475509 HSP90B1 heat shock protein 90 beta family member 1 2 4
MIRT478134 DHX36 DEAH-box helicase 36 2 2
MIRT481326 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 2 2
MIRT482003 AMOTL2 angiomotin like 2 2 2
MIRT482230 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT483436 RHOXF2B Rhox homeobox family member 2B 2 2
MIRT483824 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT492051 TNFSF9 TNF superfamily member 9 2 2
MIRT494114 DLX6 distal-less homeobox 6 2 2
MIRT498882 ZNF12 zinc finger protein 12 2 10
MIRT499674 NPHP3 nephrocystin 3 2 2
MIRT506932 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT509461 ZNF587 zinc finger protein 587 2 6
MIRT510048 AKR1B10 aldo-keto reductase family 1 member B10 2 4
MIRT514807 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT515217 CRCP CGRP receptor component 2 2
MIRT515486 INCENP inner centromere protein 2 4
MIRT517765 ZNF366 zinc finger protein 366 2 4
MIRT518216 TRMT10B tRNA methyltransferase 10B 2 2
MIRT519602 ZNF805 zinc finger protein 805 2 2
MIRT523570 GGCX gamma-glutamyl carboxylase 2 4
MIRT525795 SOD2 superoxide dismutase 2 2 2
MIRT533055 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT534218 SLC37A3 solute carrier family 37 member 3 2 4
MIRT535633 NR2E1 nuclear receptor subfamily 2 group E member 1 2 2
MIRT535863 MRPL17 mitochondrial ribosomal protein L17 2 2
MIRT536344 LEFTY1 left-right determination factor 1 2 2
MIRT537923 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT543114 SKA2 spindle and kinetochore associated complex subunit 2 2 2
MIRT544717 ZNF529 zinc finger protein 529 2 2
MIRT544847 BASP1 brain abundant membrane attached signal protein 1 2 4
MIRT545536 ARF3 ADP ribosylation factor 3 2 2
MIRT547124 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT548070 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT548446 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 2
MIRT548626 DAZAP1 DAZ associated protein 1 2 4
MIRT550259 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT551940 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552511 ZIK1 zinc finger protein interacting with K protein 1 2 4
MIRT554015 SPIRE1 spire type actin nucleation factor 1 2 2
MIRT556647 KPNA2 karyopherin subunit alpha 2 2 4
MIRT559744 ACOX1 acyl-CoA oxidase 1 2 2
MIRT560393 TMEM254 transmembrane protein 254 2 2
MIRT562234 HMGB2 high mobility group box 2 2 2
MIRT563325 ORC4 origin recognition complex subunit 4 2 2
MIRT563697 RPS26 ribosomal protein S26 2 2
MIRT565066 USP25 ubiquitin specific peptidase 25 2 2
MIRT565349 TMED2 transmembrane p24 trafficking protein 2 2 2
MIRT565624 SLC31A1 solute carrier family 31 member 1 2 2
MIRT566379 PNISR PNN interacting serine and arginine rich protein 2 2
MIRT567575 FEM1C fem-1 homolog C 2 2
MIRT569383 DDX20 DEAD-box helicase 20 2 2
MIRT570037 FAM228A family with sequence similarity 228 member A 2 2
MIRT573269 DCAF10 DDB1 and CUL4 associated factor 10 2 2
MIRT573912 PARP1 poly(ADP-ribose) polymerase 1 2 2
MIRT620034 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT635606 ZWILCH zwilch kinetochore protein 2 2
MIRT644413 FRMD6 FERM domain containing 6 2 2
MIRT652528 TM9SF4 transmembrane 9 superfamily member 4 2 2
MIRT656238 MFSD6 major facilitator superfamily domain containing 6 2 2
MIRT661373 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT662530 PNPLA4 patatin like phospholipase domain containing 4 2 2
MIRT675551 MALL mal, T-cell differentiation protein like 2 2
MIRT693650 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT696348 SLC35D2 solute carrier family 35 member D2 2 2
MIRT705815 AKNA AT-hook transcription factor 2 2
MIRT707632 TARDBP TAR DNA binding protein 2 2
MIRT717902 COPS8 COP9 signalosome subunit 8 2 2
MIRT723626 SOBP sine oculis binding protein homolog 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3123 Doxorubicin 31703 NSC123127 approved sensitive High Triple-Negative Breast Cancer cell line (MDA-MB-231, MDA-MB-468)
hsa-mir-3123 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3123 Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-3123 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3123 Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)

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