pre-miRNA Information
pre-miRNA hsa-mir-367   
Genomic Coordinates chr4: 112647874 - 112647941
Synonyms MIRN367, hsa-mir-367, MIR367
Description Homo sapiens miR-367 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-367-3p
Sequence 44| AAUUGCACUUUAGCAAUGGUGA |65
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN24411246 17 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs535597757 1 dbSNP
rs1013348949 11 dbSNP
rs896333735 12 dbSNP
rs751269136 14 dbSNP
rs1163501507 16 dbSNP
rs757092597 21 dbSNP
Putative Targets

Gene Information
Gene Symbol TNFRSF13C   
Synonyms BAFF-R, BAFFR, BROMIX, CD268, CVID4, prolixin
Description TNF receptor superfamily member 13C
Transcript NM_052945   
Expression
Putative miRNA Targets on TNFRSF13C
3'UTR of TNFRSF13C
(miRNA target sites are highlighted)
>TNFRSF13C|NM_052945|3'UTR
   1 CAGGGAGCCGGCAGGAGGTGGCCCCTGCCCTCCCTCTGGACCCCCAGCCAGGGGCTTGGAAATCAAATTCAGCTCTTCAC
  81 TCCAGCATGCACATGCCCTCTTTCTGGGACCAGGCTAACTCTGCAGAAGCACAGACACTACAGACCACAGCATTCAGCCC
 161 CCATGGAGTTTGGTGTGCTTGCCTTTGGCTTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTG
 241 TTCCTGTGCCTTCAAAAGGCTGGGGCACTATGAGTAAAAGACCGCTTTTAAAATGGGGAAGGCACCATTAAGCCAAAATG
 321 AATCTGAAAAAAGAC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agUGGUAA--CGAUUUCACGUUAa 5'
            ||||||  || ||| || ||| 
Target 5' gcACCATTAAGCCAAAATG-AATc 3'
302 - 324 98.00 -9.39
2
miRNA  3' aguGGUAAC---GAUUUCACGuuaa 5'
             |||| |   :|:: ||||    
Target 5' cccCCATGGAGTTTGGTGTGCttgc 3'
158 - 182 95.00 -7.46
3
miRNA  3' agUGGUAACGAUU-UCACGUUaa 5'
            ||||  |||||   ||||:  
Target 5' ggACCA-GGCTAACTCTGCAGaa 3'
107 - 128 95.00 -10.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
902822 107 ClinVar
341875 113 ClinVar
341874 120 ClinVar
902821 253 ClinVar
COSN1262382 9 COSMIC
COSN8612774 10 COSMIC
COSN5771441 28 COSMIC
COSN30143326 41 COSMIC
COSN30171886 59 COSMIC
COSN31607505 119 COSMIC
COSN28644838 120 COSMIC
COSN31589927 150 COSMIC
COSN29516309 366 COSMIC
COSN25397831 379 COSMIC
COSN23280539 573 COSMIC
COSN8010887 606 COSMIC
COSN21741497 611 COSMIC
COSN22708597 639 COSMIC
COSN8010886 711 COSMIC
COSN27894477 965 COSMIC
COSN22974507 1110 COSMIC
COSN17033911 1310 COSMIC
COSN16094342 1391 COSMIC
COSN21812072 1589 COSMIC
COSN26778217 1659 COSMIC
COSN9166481 1689 COSMIC
COSN26439381 1852 COSMIC
COSN24393924 1876 COSMIC
COSN31785599 2022 COSMIC
COSN30564252 2074 COSMIC
COSN20049580 2102 COSMIC
COSN9166480 2182 COSMIC
COSN22840399 2743 COSMIC
COSN21839881 2787 COSMIC
COSN22126145 3242 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs774676375 1 dbSNP
rs771057173 3 dbSNP
rs749167908 6 dbSNP
rs1192790802 8 dbSNP
rs777377349 9 dbSNP
rs375349302 10 dbSNP
rs1195732609 14 dbSNP
rs1488612535 17 dbSNP
rs1289061207 20 dbSNP
rs1207494540 21 dbSNP
rs1357874647 22 dbSNP
rs1198117976 29 dbSNP
rs1250654981 30 dbSNP
rs370765269 32 dbSNP
rs1480922952 38 dbSNP
rs1265622212 41 dbSNP
rs1197274229 42 dbSNP
rs781250597 44 dbSNP
rs1423098800 48 dbSNP
rs754571946 50 dbSNP
rs535548849 59 dbSNP
rs1035833591 60 dbSNP
rs1476525646 61 dbSNP
rs1169378726 84 dbSNP
rs1355554615 88 dbSNP
rs1479487414 90 dbSNP
rs1428739739 93 dbSNP
rs1182771703 95 dbSNP
rs1483971753 101 dbSNP
rs183879206 104 dbSNP
rs1194955140 108 dbSNP
rs1401936697 110 dbSNP
rs986205392 112 dbSNP
rs550105406 113 dbSNP
rs1338757170 114 dbSNP
rs531935311 116 dbSNP
rs992009490 119 dbSNP
rs7290134 120 dbSNP
rs1254220118 121 dbSNP
rs749392458 123 dbSNP
rs1485210625 129 dbSNP
rs1211358533 134 dbSNP
rs552891065 136 dbSNP
rs539226150 137 dbSNP
rs935247964 139 dbSNP
rs923818104 146 dbSNP
rs1429842304 153 dbSNP
rs1352819475 155 dbSNP
rs1000780087 158 dbSNP
rs1305516019 159 dbSNP
rs1391170822 161 dbSNP
rs527931547 171 dbSNP
rs1435687857 176 dbSNP
rs1017940994 177 dbSNP
rs1051597250 178 dbSNP
rs1006477488 202 dbSNP
rs1289740026 211 dbSNP
rs560666151 213 dbSNP
rs1385209751 230 dbSNP
rs1299040468 240 dbSNP
rs1468468985 240 dbSNP
rs1405664924 243 dbSNP
rs890889697 270 dbSNP
rs922076988 272 dbSNP
rs541132930 283 dbSNP
rs998464123 284 dbSNP
rs528942591 285 dbSNP
rs1252850660 293 dbSNP
rs909237018 294 dbSNP
rs1361924189 297 dbSNP
rs983388574 298 dbSNP
rs1181083803 302 dbSNP
rs1424163317 306 dbSNP
rs1378850336 317 dbSNP
rs1258071210 319 dbSNP
rs1201354189 321 dbSNP
rs9623477 324 dbSNP
rs1268398404 327 dbSNP
rs1419524401 328 dbSNP
rs71311417 337 dbSNP
rs1160077338 342 dbSNP
rs1209997933 345 dbSNP
rs561545671 352 dbSNP
rs950976690 357 dbSNP
rs1293019318 362 dbSNP
rs1035864551 365 dbSNP
rs1441527013 365 dbSNP
rs191236127 371 dbSNP
rs1305615806 375 dbSNP
rs1326469271 376 dbSNP
rs1374336606 376 dbSNP
rs1259469757 378 dbSNP
rs1239013791 379 dbSNP
rs1341412975 380 dbSNP
rs1315223047 382 dbSNP
rs1450941508 383 dbSNP
rs1220144424 386 dbSNP
rs1218670984 387 dbSNP
rs1285781869 387 dbSNP
rs1468586061 388 dbSNP
rs377579299 388 dbSNP
rs1321474676 389 dbSNP
rs1458883233 392 dbSNP
rs1382959184 409 dbSNP
rs1157906806 411 dbSNP
rs1003083134 412 dbSNP
rs1370155995 413 dbSNP
rs1181475366 415 dbSNP
rs1443796034 417 dbSNP
rs1164553498 418 dbSNP
rs1178168120 418 dbSNP
rs1215046337 418 dbSNP
rs1226259457 418 dbSNP
rs1256674490 418 dbSNP
rs1279941148 418 dbSNP
rs1292339725 418 dbSNP
rs1327810627 418 dbSNP
rs1329542565 418 dbSNP
rs1334896506 418 dbSNP
rs1375337525 418 dbSNP
rs1398051115 418 dbSNP
rs1409291831 418 dbSNP
rs1410352808 418 dbSNP
rs1422298453 418 dbSNP
rs1441127521 418 dbSNP
rs1463113155 418 dbSNP
rs1469905132 418 dbSNP
rs750334567 418 dbSNP
rs778645118 418 dbSNP
rs1248192579 419 dbSNP
rs1356035616 419 dbSNP
rs1445607105 422 dbSNP
rs575925640 423 dbSNP
rs1444752500 427 dbSNP
rs1260479409 436 dbSNP
rs557663429 437 dbSNP
rs570361108 438 dbSNP
rs1275771020 439 dbSNP
rs930168646 449 dbSNP
rs1215662320 458 dbSNP
rs897308861 459 dbSNP
rs1039062742 460 dbSNP
rs1294600624 461 dbSNP
rs1012427041 462 dbSNP
rs368947939 464 dbSNP
rs1298591988 466 dbSNP
rs1032017172 467 dbSNP
rs927499526 471 dbSNP
rs868089059 474 dbSNP
rs950006741 479 dbSNP
rs1475808529 480 dbSNP
rs1168404835 482 dbSNP
rs917360928 483 dbSNP
rs999150416 484 dbSNP
rs1375613610 488 dbSNP
rs1317681656 489 dbSNP
rs1416228360 497 dbSNP
rs1315866530 498 dbSNP
rs34574863 500 dbSNP
rs1387451644 501 dbSNP
rs1325320037 506 dbSNP
rs1392724521 508 dbSNP
rs1272379375 511 dbSNP
rs1161604290 512 dbSNP
rs6002544 518 dbSNP
rs144617529 522 dbSNP
rs933199336 523 dbSNP
rs1261364193 531 dbSNP
rs1447605908 544 dbSNP
rs369759435 545 dbSNP
rs1452514762 549 dbSNP
rs1192993112 554 dbSNP
rs1241177051 562 dbSNP
rs979636696 563 dbSNP
rs1198880404 565 dbSNP
rs571045124 570 dbSNP
rs1271677632 577 dbSNP
rs1018118681 578 dbSNP
rs781251559 579 dbSNP
rs142665125 582 dbSNP
rs983419645 586 dbSNP
rs1373619922 587 dbSNP
rs929306521 588 dbSNP
rs1237366984 599 dbSNP
rs1490282605 611 dbSNP
rs1275849160 614 dbSNP
rs1216724058 617 dbSNP
rs556362652 618 dbSNP
rs928918545 621 dbSNP
rs1468143072 626 dbSNP
rs58172291 631 dbSNP
rs1233978028 632 dbSNP
rs993924480 634 dbSNP
rs570750103 638 dbSNP
rs1301189454 639 dbSNP
rs1362789459 644 dbSNP
rs549333417 647 dbSNP
rs1160009096 648 dbSNP
rs1391613535 655 dbSNP
rs1460511481 661 dbSNP
rs941493377 664 dbSNP
rs1309566460 672 dbSNP
rs1408013269 676 dbSNP
rs1418263611 680 dbSNP
rs1172868372 685 dbSNP
rs906130760 691 dbSNP
rs1336781349 692 dbSNP
rs1426656148 692 dbSNP
rs1334218818 694 dbSNP
rs1044648389 703 dbSNP
rs34143647 704 dbSNP
rs1480374284 711 dbSNP
rs950058628 712 dbSNP
rs990298654 716 dbSNP
rs917243615 721 dbSNP
rs9607858 722 dbSNP
rs529288696 723 dbSNP
rs934763977 727 dbSNP
rs1438226147 734 dbSNP
rs527944047 741 dbSNP
rs567081140 742 dbSNP
rs9607857 743 dbSNP
rs537125125 747 dbSNP
rs1272562019 748 dbSNP
rs1420582675 751 dbSNP
rs150043880 759 dbSNP
rs561849007 760 dbSNP
rs543133918 767 dbSNP
rs58264802 768 dbSNP
rs1393546943 773 dbSNP
rs563734043 780 dbSNP
rs1311236446 781 dbSNP
rs1233903795 782 dbSNP
rs900390195 784 dbSNP
rs985330987 785 dbSNP
rs955076642 787 dbSNP
rs1250740064 797 dbSNP
rs1281214987 810 dbSNP
rs1439745064 811 dbSNP
rs941835754 815 dbSNP
rs1254880998 822 dbSNP
rs6002543 824 dbSNP
rs994201058 825 dbSNP
rs1258997607 833 dbSNP
rs1334377554 836 dbSNP
rs12168725 837 dbSNP
rs929331252 838 dbSNP
rs1042766675 843 dbSNP
rs928658124 854 dbSNP
rs1403483684 857 dbSNP
rs1463814112 859 dbSNP
rs1175026614 860 dbSNP
rs1172168027 867 dbSNP
rs1375012927 871 dbSNP
rs1457324921 877 dbSNP
rs1413260426 879 dbSNP
rs11362999 880 dbSNP
rs1277911924 880 dbSNP
rs1315059336 880 dbSNP
rs1359930234 880 dbSNP
rs1381744700 880 dbSNP
rs1415612556 880 dbSNP
rs35868120 880 dbSNP
rs71184848 880 dbSNP
rs1179536067 881 dbSNP
rs1211115513 881 dbSNP
rs1491397939 881 dbSNP
rs571965929 885 dbSNP
rs1232717577 886 dbSNP
rs113062392 888 dbSNP
rs1262961183 889 dbSNP
rs1462783478 892 dbSNP
rs1261508390 900 dbSNP
rs1394850776 901 dbSNP
rs1203042101 904 dbSNP
rs948994434 907 dbSNP
rs1175709668 910 dbSNP
rs1330000414 914 dbSNP
rs916123994 919 dbSNP
rs542037839 922 dbSNP
rs990762381 928 dbSNP
rs1222053296 930 dbSNP
rs1301215181 931 dbSNP
rs1369944531 936 dbSNP
rs779601121 938 dbSNP
rs1284530732 939 dbSNP
rs1234772153 944 dbSNP
rs1302899885 946 dbSNP
rs757697849 947 dbSNP
rs1380048964 948 dbSNP
rs1017068784 949 dbSNP
rs574533350 955 dbSNP
rs1465915377 957 dbSNP
rs1212344267 961 dbSNP
rs1252948696 965 dbSNP
rs1005740551 974 dbSNP
rs1454950866 977 dbSNP
rs1193292101 978 dbSNP
rs1405996310 984 dbSNP
rs556660389 989 dbSNP
rs9607856 992 dbSNP
rs906016682 1002 dbSNP
rs537952634 1003 dbSNP
rs1044700523 1006 dbSNP
rs1014509557 1007 dbSNP
rs1347011837 1010 dbSNP
rs1346517376 1011 dbSNP
rs896030774 1014 dbSNP
rs1053133261 1015 dbSNP
rs934627890 1018 dbSNP
rs1407917085 1019 dbSNP
rs577314502 1022 dbSNP
rs1446824180 1023 dbSNP
rs558952436 1024 dbSNP
rs966428998 1028 dbSNP
rs1183281897 1029 dbSNP
rs1465385257 1033 dbSNP
rs1273032042 1036 dbSNP
rs1030426440 1037 dbSNP
rs1213774845 1050 dbSNP
rs1224508868 1054 dbSNP
rs1316220315 1055 dbSNP
rs534513904 1057 dbSNP
rs911047954 1058 dbSNP
rs1247816403 1059 dbSNP
rs1357100007 1061 dbSNP
rs764665361 1064 dbSNP
rs985383329 1065 dbSNP
rs1435429471 1066 dbSNP
rs1363418621 1067 dbSNP
rs1286557181 1070 dbSNP
rs1352511870 1078 dbSNP
rs955296177 1080 dbSNP
rs559369975 1084 dbSNP
rs1351954785 1085 dbSNP
rs972440242 1087 dbSNP
rs947141573 1094 dbSNP
rs567142069 1098 dbSNP
rs1016712224 1099 dbSNP
rs893933807 1103 dbSNP
rs1230498535 1105 dbSNP
rs371492872 1109 dbSNP
rs5996086 1110 dbSNP
rs1163138219 1113 dbSNP
rs569341019 1114 dbSNP
rs1258311101 1115 dbSNP
rs1023140085 1124 dbSNP
rs1014396582 1126 dbSNP
rs868552711 1131 dbSNP
rs1409090197 1138 dbSNP
rs1169002595 1139 dbSNP
rs549893737 1143 dbSNP
rs907261860 1147 dbSNP
rs1485588621 1153 dbSNP
rs1046146845 1156 dbSNP
rs1224706804 1160 dbSNP
rs1449617005 1165 dbSNP
rs1268889345 1166 dbSNP
rs11412649 1176 dbSNP
rs1333717562 1176 dbSNP
rs1487616802 1176 dbSNP
rs398037241 1176 dbSNP
rs558451412 1176 dbSNP
rs1489791120 1177 dbSNP
rs531259149 1189 dbSNP
rs948743992 1190 dbSNP
rs1475036170 1194 dbSNP
rs1189217760 1198 dbSNP
rs916180240 1202 dbSNP
rs1432686637 1204 dbSNP
rs1054697955 1209 dbSNP
rs62240988 1218 dbSNP
rs936180204 1222 dbSNP
rs527600753 1233 dbSNP
rs1304256442 1239 dbSNP
rs80243871 1240 dbSNP
rs541752296 1241 dbSNP
rs976193638 1242 dbSNP
rs1283644915 1246 dbSNP
rs1462827112 1250 dbSNP
rs1234975269 1264 dbSNP
rs1356431177 1267 dbSNP
rs943455701 1268 dbSNP
rs1209258170 1269 dbSNP
rs889161598 1270 dbSNP
rs1430137547 1271 dbSNP
rs1049558973 1274 dbSNP
rs1017969004 1284 dbSNP
rs933799180 1285 dbSNP
rs1156513171 1294 dbSNP
rs1406567316 1300 dbSNP
rs1457356226 1303 dbSNP
rs1323080897 1307 dbSNP
rs1392926893 1310 dbSNP
rs1440554781 1313 dbSNP
rs1324603811 1314 dbSNP
rs951935018 1319 dbSNP
rs1268106625 1325 dbSNP
rs922543217 1329 dbSNP
rs973046172 1341 dbSNP
rs993251283 1345 dbSNP
rs1481528421 1348 dbSNP
rs1230346004 1354 dbSNP
rs907319316 1359 dbSNP
rs1249259381 1361 dbSNP
rs1045807198 1366 dbSNP
rs1453150890 1370 dbSNP
rs1179195839 1388 dbSNP
rs1362886672 1395 dbSNP
rs1312241857 1403 dbSNP
rs1160762589 1407 dbSNP
rs574624473 1413 dbSNP
rs1461376345 1419 dbSNP
rs1276073771 1421 dbSNP
rs894456375 1426 dbSNP
rs1344102977 1427 dbSNP
rs1390053358 1439 dbSNP
rs1328394168 1447 dbSNP
rs1351347265 1453 dbSNP
rs1283218578 1457 dbSNP
rs1411671160 1462 dbSNP
rs909535334 1467 dbSNP
rs562498746 1468 dbSNP
rs1392317642 1470 dbSNP
rs757172074 1476 dbSNP
rs1243933692 1491 dbSNP
rs1054438069 1496 dbSNP
rs1193887314 1498 dbSNP
rs1249313307 1500 dbSNP
rs1483171497 1501 dbSNP
rs1376065010 1502 dbSNP
rs969803069 1503 dbSNP
rs544703386 1504 dbSNP
rs1474624379 1506 dbSNP
rs1188798277 1507 dbSNP
rs936253516 1518 dbSNP
rs1379781283 1519 dbSNP
rs1461713222 1530 dbSNP
rs1371617475 1537 dbSNP
rs924825031 1541 dbSNP
rs1311331808 1545 dbSNP
rs1022691776 1550 dbSNP
rs1407137376 1557 dbSNP
rs1354875768 1558 dbSNP
rs993014087 1560 dbSNP
rs1041912295 1561 dbSNP
rs1342200416 1562 dbSNP
rs560272352 1576 dbSNP
rs1428505954 1580 dbSNP
rs934145515 1589 dbSNP
rs1420625602 1590 dbSNP
rs1342662283 1593 dbSNP
rs187201501 1603 dbSNP
rs1248211189 1617 dbSNP
rs544482105 1620 dbSNP
rs1277779977 1621 dbSNP
rs999505655 1624 dbSNP
rs923047355 1625 dbSNP
rs751327386 1628 dbSNP
rs975844151 1631 dbSNP
rs943088563 1632 dbSNP
rs910231347 1633 dbSNP
rs1171956096 1636 dbSNP
rs759805007 1642 dbSNP
rs1466556108 1643 dbSNP
rs1022048312 1647 dbSNP
rs77665467 1655 dbSNP
rs112684328 1658 dbSNP
rs1296850839 1662 dbSNP
rs1365601972 1666 dbSNP
rs1230380152 1670 dbSNP
rs1300728586 1672 dbSNP
rs1311267571 1677 dbSNP
rs889213816 1686 dbSNP
rs1263056786 1691 dbSNP
rs1051775904 1693 dbSNP
rs1208623832 1694 dbSNP
rs1240436756 1697 dbSNP
rs79006183 1702 dbSNP
rs1466497231 1703 dbSNP
rs1192152938 1706 dbSNP
rs900992095 1711 dbSNP
rs1433978891 1715 dbSNP
rs12158476 1716 dbSNP
rs1362114424 1719 dbSNP
rs555283091 1724 dbSNP
rs1319765133 1730 dbSNP
rs1013022431 1731 dbSNP
rs1391204298 1738 dbSNP
rs543624723 1741 dbSNP
rs1339014304 1743 dbSNP
rs939933334 1746 dbSNP
rs1219411036 1750 dbSNP
rs764931236 1754 dbSNP
rs1397556728 1757 dbSNP
rs192697635 1758 dbSNP
rs1314559739 1759 dbSNP
rs1227276151 1782 dbSNP
rs1269244351 1791 dbSNP
rs1331857194 1792 dbSNP
rs1033021518 1802 dbSNP
rs576020512 1807 dbSNP
rs948343807 1808 dbSNP
rs373481764 1809 dbSNP
rs992565612 1811 dbSNP
rs1000160835 1813 dbSNP
rs1405494747 1813 dbSNP
rs1160024749 1814 dbSNP
rs1159055054 1816 dbSNP
rs933416340 1820 dbSNP
rs960229346 1820 dbSNP
rs1362023729 1827 dbSNP
rs1436956072 1836 dbSNP
rs1294879555 1838 dbSNP
rs1032255807 1847 dbSNP
rs1370730117 1857 dbSNP
rs1158019556 1859 dbSNP
rs1408626395 1861 dbSNP
rs541487427 1862 dbSNP
rs1244581700 1866 dbSNP
rs1181439769 1867 dbSNP
rs1231975099 1868 dbSNP
rs1289822135 1869 dbSNP
rs1460458154 1877 dbSNP
rs1322656011 1885 dbSNP
rs866597249 1893 dbSNP
rs1249780440 1898 dbSNP
rs550852901 1901 dbSNP
rs1183253851 1911 dbSNP
rs754099397 1913 dbSNP
rs1353415158 1922 dbSNP
rs1179993492 1943 dbSNP
rs901323870 1947 dbSNP
rs1040247006 1948 dbSNP
rs1238767166 1949 dbSNP
rs1368539122 1953 dbSNP
rs1021850613 1958 dbSNP
rs1360703546 1960 dbSNP
rs537560817 1966 dbSNP
rs1308310811 1969 dbSNP
rs150540731 1970 dbSNP
rs551843429 1971 dbSNP
rs527330053 1977 dbSNP
rs1030405931 1978 dbSNP
rs112186516 1985 dbSNP
rs1230594066 1987 dbSNP
rs997552211 1988 dbSNP
rs971935129 1994 dbSNP
rs897869188 2013 dbSNP
rs1202267546 2022 dbSNP
rs971695328 2026 dbSNP
rs1479716301 2029 dbSNP
rs561022513 2048 dbSNP
rs1024157224 2054 dbSNP
rs1236770329 2057 dbSNP
rs1037278714 2060 dbSNP
rs958822424 2062 dbSNP
rs1004020155 2070 dbSNP
rs1000232273 2076 dbSNP
rs1168798678 2079 dbSNP
rs559716193 2080 dbSNP
rs1412213694 2083 dbSNP
rs751026158 2091 dbSNP
rs1332921079 2094 dbSNP
rs9607855 2095 dbSNP
rs111400080 2102 dbSNP
rs1268977737 2104 dbSNP
rs1264717180 2111 dbSNP
rs1229639290 2124 dbSNP
rs915573432 2130 dbSNP
rs1056940896 2134 dbSNP
rs938433914 2135 dbSNP
rs1221661296 2138 dbSNP
rs1346007902 2139 dbSNP
rs1218918380 2154 dbSNP
rs574394923 2172 dbSNP
rs1391596817 2175 dbSNP
rs1444237401 2176 dbSNP
rs1303349250 2179 dbSNP
rs555853426 2180 dbSNP
rs768671084 2184 dbSNP
rs901386617 2187 dbSNP
rs1039876208 2188 dbSNP
rs1344771347 2189 dbSNP
rs1391847499 2194 dbSNP
rs942859845 2196 dbSNP
rs888897315 2197 dbSNP
rs912126746 2207 dbSNP
rs76744864 2209 dbSNP
rs1415700710 2212 dbSNP
rs774949810 2214 dbSNP
rs771637103 2223 dbSNP
rs1388551550 2226 dbSNP
rs986335121 2235 dbSNP
rs953416329 2243 dbSNP
rs1329779477 2252 dbSNP
rs930333935 2258 dbSNP
rs577091469 2260 dbSNP
rs1271003934 2263 dbSNP
rs1222147449 2265 dbSNP
rs918939714 2274 dbSNP
rs1036411322 2278 dbSNP
rs950007875 2287 dbSNP
rs183353138 2292 dbSNP
rs1449699562 2299 dbSNP
rs997437616 2303 dbSNP
rs540720424 2304 dbSNP
rs962450166 2343 dbSNP
rs1478688211 2345 dbSNP
rs958778132 2346 dbSNP
rs1410661457 2358 dbSNP
rs1014985178 2362 dbSNP
rs116572943 2364 dbSNP
rs1388998653 2368 dbSNP
rs1405532091 2371 dbSNP
rs888273545 2374 dbSNP
rs1386594110 2375 dbSNP
rs1367392807 2381 dbSNP
rs1408292522 2383 dbSNP
rs1301016397 2388 dbSNP
rs978823785 2394 dbSNP
rs1423767553 2409 dbSNP
rs1228903844 2414 dbSNP
rs554619120 2415 dbSNP
rs1269970285 2419 dbSNP
rs1048376088 2433 dbSNP
rs1209030147 2434 dbSNP
rs1012836925 2435 dbSNP
rs1290077416 2441 dbSNP
rs1452965008 2442 dbSNP
rs1169357863 2450 dbSNP
rs757492824 2453 dbSNP
rs1472661338 2462 dbSNP
rs1056826620 2465 dbSNP
rs1367239340 2473 dbSNP
rs543313830 2478 dbSNP
rs544106009 2481 dbSNP
rs998553548 2484 dbSNP
rs965696514 2487 dbSNP
rs374182816 2490 dbSNP
rs1018934692 2493 dbSNP
rs575812166 2502 dbSNP
rs1041451429 2503 dbSNP
rs747696533 2506 dbSNP
rs1371184819 2508 dbSNP
rs1048519138 2510 dbSNP
rs994558315 2522 dbSNP
rs897547557 2526 dbSNP
rs1036032373 2527 dbSNP
rs1361380576 2527 dbSNP
rs1220647633 2532 dbSNP
rs949752700 2534 dbSNP
rs1451451836 2544 dbSNP
rs1206697865 2546 dbSNP
rs917209930 2546 dbSNP
rs1253534272 2547 dbSNP
rs1052043806 2553 dbSNP
rs1056104693 2555 dbSNP
rs1370537746 2558 dbSNP
rs1448065040 2565 dbSNP
rs1168160534 2566 dbSNP
rs1371410455 2568 dbSNP
rs1428592287 2568 dbSNP
rs1301157189 2569 dbSNP
rs1401676266 2572 dbSNP
rs1395353209 2574 dbSNP
rs937183270 2575 dbSNP
rs1384662067 2576 dbSNP
rs1225906721 2577 dbSNP
rs1296343028 2578 dbSNP
rs929263040 2584 dbSNP
rs925795327 2586 dbSNP
rs1253708624 2589 dbSNP
rs1257448575 2595 dbSNP
rs1201474865 2597 dbSNP
rs1224232778 2597 dbSNP
rs371270491 2598 dbSNP
rs1245541174 2600 dbSNP
rs1188346622 2602 dbSNP
rs1463776455 2602 dbSNP
rs1347245427 2607 dbSNP
rs1451558744 2608 dbSNP
rs1174274946 2609 dbSNP
rs919277153 2614 dbSNP
rs1466638117 2616 dbSNP
rs1173049516 2626 dbSNP
rs1281308259 2627 dbSNP
rs1408228432 2628 dbSNP
rs1404109834 2631 dbSNP
rs978557017 2636 dbSNP
rs1383533856 2638 dbSNP
rs1298766554 2639 dbSNP
rs967457478 2643 dbSNP
rs1233351691 2644 dbSNP
rs1265484905 2645 dbSNP
rs1464519597 2645 dbSNP
rs1330451446 2649 dbSNP
rs1487083329 2650 dbSNP
rs1407811732 2657 dbSNP
rs1266979976 2660 dbSNP
rs1433787431 2661 dbSNP
rs1201073232 2662 dbSNP
rs1409933404 2666 dbSNP
rs1455547245 2669 dbSNP
rs1158395584 2671 dbSNP
rs1395368306 2673 dbSNP
rs1455178122 2676 dbSNP
rs750201889 2679 dbSNP
rs1366491346 2681 dbSNP
rs1387056100 2684 dbSNP
rs557550104 2685 dbSNP
rs1228296518 2688 dbSNP
rs976813075 2688 dbSNP
rs1432064716 2689 dbSNP
rs1197971539 2692 dbSNP
rs1477886155 2695 dbSNP
rs965743671 2696 dbSNP
rs1219832129 2697 dbSNP
rs973444296 2697 dbSNP
rs1201910564 2702 dbSNP
rs1488926960 2702 dbSNP
rs922408544 2706 dbSNP
rs1472317086 2709 dbSNP
rs1233865885 2714 dbSNP
rs1408629054 2722 dbSNP
rs1184451480 2727 dbSNP
rs1420598368 2728 dbSNP
rs947573924 2745 dbSNP
rs1349157767 2746 dbSNP
rs914737874 2749 dbSNP
rs986220640 2765 dbSNP
rs953636676 2776 dbSNP
rs576282745 2777 dbSNP
rs749691304 2779 dbSNP
rs1376149833 2782 dbSNP
rs1227172501 2787 dbSNP
rs976506510 2793 dbSNP
rs952935528 2801 dbSNP
rs6002542 2811 dbSNP
rs963501217 2815 dbSNP
rs1224942728 2816 dbSNP
rs994258476 2817 dbSNP
rs1482729006 2826 dbSNP
rs1205969812 2834 dbSNP
rs1351344460 2838 dbSNP
rs1281033058 2841 dbSNP
rs571500531 2846 dbSNP
rs897621310 2847 dbSNP
rs1180088500 2848 dbSNP
rs1375623780 2850 dbSNP
rs1445042910 2853 dbSNP
rs1006298225 2854 dbSNP
rs952693136 2859 dbSNP
rs1454114282 2871 dbSNP
rs558281147 2871 dbSNP
rs1428477410 2874 dbSNP
rs1308104869 2876 dbSNP
rs1355814501 2877 dbSNP
rs1446429669 2880 dbSNP
rs1013950679 2881 dbSNP
rs1380295555 2886 dbSNP
rs537882034 2887 dbSNP
rs895453290 2887 dbSNP
rs760804081 2891 dbSNP
rs1174872632 2914 dbSNP
rs1229504264 2915 dbSNP
rs1275170848 2921 dbSNP
rs1414351135 2923 dbSNP
rs1440821462 2926 dbSNP
rs1026822362 2928 dbSNP
rs1055441907 2940 dbSNP
rs1409389805 2948 dbSNP
rs937255496 2949 dbSNP
rs1012723148 2960 dbSNP
rs1185214332 2966 dbSNP
rs867107127 2972 dbSNP
rs1246036005 2975 dbSNP
rs756618708 2976 dbSNP
rs894411320 2978 dbSNP
rs1035584079 2980 dbSNP
rs945854727 2984 dbSNP
rs1175892507 2990 dbSNP
rs1002978347 2991 dbSNP
rs977221976 2992 dbSNP
rs1364980081 2994 dbSNP
rs1436063466 2996 dbSNP
rs902838184 2998 dbSNP
rs1342911449 2999 dbSNP
rs1041895078 3013 dbSNP
rs947158086 3014 dbSNP
rs892851885 3016 dbSNP
rs115847067 3023 dbSNP
rs753300429 3024 dbSNP
rs115102353 3027 dbSNP
rs1193401683 3037 dbSNP
rs767705450 3042 dbSNP
rs1241304599 3060 dbSNP
rs1209549231 3061 dbSNP
rs547843182 3064 dbSNP
rs1157653362 3065 dbSNP
rs1286279801 3065 dbSNP
rs1027192549 3068 dbSNP
rs1401683124 3074 dbSNP
rs1320461344 3081 dbSNP
rs1329577703 3085 dbSNP
rs1436103790 3090 dbSNP
rs972912185 3091 dbSNP
rs530025568 3095 dbSNP
rs1266195311 3097 dbSNP
rs961514200 3097 dbSNP
rs940720260 3099 dbSNP
rs1315273779 3104 dbSNP
rs1247778208 3105 dbSNP
rs1220428934 3107 dbSNP
rs1380150960 3107 dbSNP
rs1301706454 3116 dbSNP
rs1014439801 3119 dbSNP
rs1180605433 3125 dbSNP
rs895538975 3129 dbSNP
rs1470684172 3130 dbSNP
rs144021441 3132 dbSNP
rs985157070 3138 dbSNP
rs1320915346 3143 dbSNP
rs904474129 3147 dbSNP
rs139095059 3148 dbSNP
rs945884171 3156 dbSNP
rs1023697688 3157 dbSNP
rs1335077690 3159 dbSNP
rs532389166 3160 dbSNP
rs1281044232 3180 dbSNP
rs1354059260 3181 dbSNP
rs991341118 3184 dbSNP
rs1292096369 3188 dbSNP
rs958511610 3189 dbSNP
rs1202425393 3193 dbSNP
rs1250506377 3195 dbSNP
rs1438896991 3198 dbSNP
rs1036047768 3199 dbSNP
rs1367035384 3202 dbSNP
rs1472692919 3203 dbSNP
rs1181297632 3207 dbSNP
rs1475816216 3215 dbSNP
rs1164378160 3216 dbSNP
rs1002786410 3227 dbSNP
rs903057692 3228 dbSNP
rs931308174 3233 dbSNP
rs1487826826 3234 dbSNP
rs767929643 3238 dbSNP
rs1292167598 3258 dbSNP
rs1391877577 3261 dbSNP
rs1330840818 3262 dbSNP
rs920209196 3272 dbSNP
rs1244985748 3273 dbSNP
rs1315242572 3286 dbSNP
rs1019954084 3292 dbSNP
rs1225810417 3293 dbSNP
rs1250237973 3295 dbSNP
rs1339507536 3297 dbSNP
rs972941491 3301 dbSNP
rs116853696 3303 dbSNP
rs13053769 3312 dbSNP
rs1442145743 3322 dbSNP
rs1184574288 3323 dbSNP
rs892904372 3326 dbSNP
rs1245421435 3333 dbSNP
rs1025578427 3335 dbSNP
rs992306428 3336 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000291232.3 | 3UTR | AUCUCGGCUCACUGCAAACUCUGCCUCCCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla -0.801 5.0e-4 -0.837 1.8e-4 13 Click to see details
GSE17306 Multiple myeloma 0.356 6.0e-3 0.544 2.7e-5 49 Click to see details
GSE28544 Breast cancer -0.469 1.0e-2 -0.348 4.8e-2 24 Click to see details
GSE38226 Liver fibrosis 0.459 1.8e-2 0.197 2.0e-1 21 Click to see details
GSE32688 Pancreatic cancer -0.362 2.1e-2 -0.434 6.5e-3 32 Click to see details
GSE21849 B cell lymphoma 0.302 5.6e-2 0.339 3.6e-2 29 Click to see details
GSE14794 Lymphoblastoid cells 0.131 1.1e-1 0.159 6.7e-2 90 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.232 1.3e-1 -0.318 6.1e-2 25 Click to see details
GSE21687 Ependynoma primary tumors 0.106 2.0e-1 -0.053 3.4e-1 64 Click to see details
GSE26953 Aortic valvular endothelial cells -0.153 2.4e-1 -0.144 2.5e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.163 2.5e-1 0.107 3.3e-1 20 Click to see details
GSE19350 CNS germ cell tumors -0.059 4.3e-1 -0.140 3.3e-1 12 Click to see details
GSE27834 Pluripotent stem cells -0.011 4.8e-1 -0.153 2.9e-1 16 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.021 4.9e-1 0.200 3.7e-1 5 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.021 4.9e-1 0.200 3.7e-1 5 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
255 hsa-miR-367-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055315 DUSP5 dual specificity phosphatase 5 2 8
MIRT055791 PLEKHA1 pleckstrin homology domain containing A1 2 12
MIRT057114 DDIT4 DNA damage inducible transcript 4 2 4
MIRT059663 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT059926 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT061610 BTG2 BTG anti-proliferation factor 2 2 6
MIRT066478 HMGA2 high mobility group AT-hook 2 2 2
MIRT069388 ZFYVE21 zinc finger FYVE-type containing 21 2 2
MIRT069972 GEMIN2 gem nuclear organelle associated protein 2 2 2
MIRT074764 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT076199 GID4 GID complex subunit 4 homolog 2 6
MIRT077512 UBE2Z ubiquitin conjugating enzyme E2 Z 2 4
MIRT077903 TOB1 transducer of ERBB2, 1 2 6
MIRT082250 MED29 mediator complex subunit 29 2 4
MIRT082434 CIC capicua transcriptional repressor 2 6
MIRT082474 PPP1R37 protein phosphatase 1 regulatory subunit 37 2 2
MIRT082778 ZNF264 zinc finger protein 264 2 2
MIRT084533 BCL2L11 BCL2 like 11 2 8
MIRT085309 UBXN4 UBX domain protein 4 2 8
MIRT086365 SSFA2 sperm specific antigen 2 2 8
MIRT087455 NF2 neurofibromin 2 2 2
MIRT088865 FOXN2 forkhead box N2 2 12
MIRT092185 ITPR1 inositol 1,4,5-trisphosphate receptor type 1 2 6
MIRT092326 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT093533 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096935 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 8
MIRT097026 MAP1B microtubule associated protein 1B 2 4
MIRT099137 MYLIP myosin regulatory light chain interacting protein 2 6
MIRT099905 SOX4 SRY-box 4 2 12
MIRT102289 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT102507 KLHDC10 kelch domain containing 10 2 2
MIRT102891 INSIG1 insulin induced gene 1 2 2
MIRT109188 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT124567 PRRC2B proline rich coiled-coil 2B 2 2
MIRT135568 SPRYD4 SPRY domain containing 4 2 2
MIRT161135 SLC25A36 solute carrier family 25 member 36 2 6
MIRT163995 KIAA1109 KIAA1109 2 4
MIRT164689 RNF4 ring finger protein 4 2 2
MIRT167705 HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 2 8
MIRT178956 USP28 ubiquitin specific peptidase 28 2 2
MIRT185717 ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 2 2
MIRT186264 TCEB3 elongin A 2 2
MIRT186537 TWF1 twinfilin actin binding protein 1 2 4
MIRT186628 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT189373 TXLNA taxilin alpha 2 4
MIRT197013 EIF1 eukaryotic translation initiation factor 1 2 10
MIRT206437 YIPF4 Yip1 domain family member 4 2 2
MIRT211228 FGF2 fibroblast growth factor 2 2 10
MIRT214529 C5ORF24 chromosome 5 open reading frame 24 2 2
MIRT216034 IL6ST interleukin 6 signal transducer 2 10
MIRT218084 TULP4 tubby like protein 4 2 2
MIRT242418 CCDC113 coiled-coil domain containing 113 2 2
MIRT243162 SOX11 SRY-box 11 2 2
MIRT250943 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT253350 ZNF417 zinc finger protein 417 2 2
MIRT271968 ARF1 ADP ribosylation factor 1 2 2
MIRT273214 ZNF695 zinc finger protein 695 2 4
MIRT296114 SLC12A5 solute carrier family 12 member 5 2 2
MIRT301711 TEF TEF, PAR bZIP transcription factor 2 2
MIRT316477 ARID1B AT-rich interaction domain 1B 2 6
MIRT322174 CLN8 CLN8, transmembrane ER and ERGIC protein 2 4
MIRT341538 CNIH1 cornichon family AMPA receptor auxiliary protein 1 2 6
MIRT356062 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT443579 PPIC peptidylprolyl isomerase C 2 2
MIRT448825 FKBP1A FK506 binding protein 1A 2 4
MIRT451494 FOPNL FGFR1OP N-terminal like 2 2
MIRT452694 MDM2 MDM2 proto-oncogene 2 2
MIRT453167 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT454588 SLC33A1 solute carrier family 33 member 1 2 4
MIRT455794 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT456010 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456044 KIAA1586 KIAA1586 2 2
MIRT456763 TMEM239 transmembrane protein 239 2 4
MIRT458068 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT459230 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT459534 MFF mitochondrial fission factor 2 6
MIRT459759 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT460236 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT461104 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462924 ZNRF3 zinc and ring finger 3 2 2
MIRT463476 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463516 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT465503 TOR1B torsin family 1 member B 2 2
MIRT469525 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470079 PTGES2 prostaglandin E synthase 2 2 2
MIRT471581 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT473451 MCOLN2 mucolipin 2 2 8
MIRT475882 H3F3C H3 histone family member 3C 2 10
MIRT475915 H3F3B H3 histone family member 3B 2 8
MIRT476195 GOLGA8A golgin A8 family member A 2 10
MIRT476318 GM2A GM2 ganglioside activator 2 2
MIRT476676 FUT11 fucosyltransferase 11 2 10
MIRT478368 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT479545 CDC5L cell division cycle 5 like 2 2
MIRT481024 BAZ2B bromodomain adjacent to zinc finger domain 2B 2 2
MIRT491009 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT493168 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT494345 CASKIN1 CASK interacting protein 1 2 2
MIRT499087 ZDHHC21 zinc finger DHHC-type containing 21 2 6
MIRT500029 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501298 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 4
MIRT503124 BCL11B B-cell CLL/lymphoma 11B 2 8
MIRT503301 GTF2A1 general transcription factor IIA subunit 1 2 6
MIRT504328 ASGR2 asialoglycoprotein receptor 2 2 6
MIRT504471 EID2B EP300 interacting inhibitor of differentiation 2B 2 2
MIRT504655 RPL9 ribosomal protein L9 2 6
MIRT505331 TMF1 TATA element modulatory factor 1 2 8
MIRT505732 SERTAD3 SERTA domain containing 3 2 4
MIRT505827 RSBN1 round spermatid basic protein 1 2 8
MIRT506004 PURG purine rich element binding protein G 2 8
MIRT506308 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT506806 KLHL15 kelch like family member 15 2 6
MIRT507119 GOLGA8B golgin A8 family member B 2 6
MIRT507353 FAM129A family with sequence similarity 129 member A 2 6
MIRT507591 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT507674 CPEB4 cytoplasmic polyadenylation element binding protein 4 2 4
MIRT507703 CNOT2 CCR4-NOT transcription complex subunit 2 2 8
MIRT508012 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT510439 ZIC5 Zic family member 5 2 6
MIRT510539 XKR7 XK related 7 2 4
MIRT510600 TPPP tubulin polymerization promoting protein 2 6
MIRT511060 NRAS NRAS proto-oncogene, GTPase 2 4
MIRT511855 GOLGA8J golgin A8 family member J 2 6
MIRT511865 GOLGA8I golgin A8 family member I, pseudogene 1 3
MIRT512570 CTDSPL CTD small phosphatase like 2 2
MIRT512708 ZNF134 zinc finger protein 134 2 6
MIRT513177 MOAP1 modulator of apoptosis 1 2 6
MIRT513783 PAWR pro-apoptotic WT1 regulator 2 6
MIRT515099 IRGQ immunity related GTPase Q 2 2
MIRT515481 INCENP inner centromere protein 2 4
MIRT517416 BMP8A bone morphogenetic protein 8a 2 2
MIRT518754 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519780 ZNF354B zinc finger protein 354B 2 4
MIRT519865 ZFP62 ZFP62 zinc finger protein 2 6
MIRT520510 TRAM2 translocation associated membrane protein 2 2 6
MIRT521068 SLC25A32 solute carrier family 25 member 32 2 6
MIRT526912 ZNF772 zinc finger protein 772 2 6
MIRT527134 GULP1 GULP, engulfment adaptor PTB domain containing 1 2 2
MIRT527867 SLC39A14 solute carrier family 39 member 14 2 2
MIRT528404 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT532956 ZNF24 zinc finger protein 24 2 4
MIRT533021 ZFC3H1 zinc finger C3H1-type containing 2 4
MIRT533191 WASL Wiskott-Aldrich syndrome like 2 6
MIRT534191 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534961 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 4
MIRT536396 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT537046 GRAMD4 GRAM domain containing 4 2 2
MIRT537125 GOLGA3 golgin A3 2 4
MIRT537183 GFPT2 glutamine-fructose-6-phosphate transaminase 2 2 4
MIRT537652 ERGIC2 ERGIC and golgi 2 2 4
MIRT538632 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT539231 ANP32E acidic nuclear phosphoprotein 32 family member E 2 6
MIRT540099 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540998 ZNF460 zinc finger protein 460 2 4
MIRT541468 AURKA aurora kinase A 2 2
MIRT542680 SESN3 sestrin 3 2 2
MIRT542757 PRRG4 proline rich and Gla domain 4 2 2
MIRT542863 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT542925 HOXC8 homeobox C8 2 2
MIRT543747 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT544404 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544583 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 4
MIRT544662 MED19 mediator complex subunit 19 2 2
MIRT545251 GTF2E1 general transcription factor IIE subunit 1 2 2
MIRT545261 TRIM36 tripartite motif containing 36 2 4
MIRT545744 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT545999 WDR81 WD repeat domain 81 2 2
MIRT546038 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT547170 PDZD8 PDZ domain containing 8 2 2
MIRT547273 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT547729 KIF5B kinesin family member 5B 2 2
MIRT548127 GATA6 GATA binding protein 6 2 2
MIRT548203 FNIP1 folliculin interacting protein 1 2 2
MIRT548756 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT549641 ZNF75A zinc finger protein 75a 2 2
MIRT549684 ZNF598 zinc finger protein 598 2 2
MIRT550197 MRO maestro 2 2
MIRT550340 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT550536 MYZAP myocardial zonula adherens protein 2 2
MIRT550975 TOR4A torsin family 4 member A 2 2
MIRT551221 CIDEC cell death inducing DFFA like effector c 2 2
MIRT551355 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT551571 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT552277 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552661 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT553081 UCK2 uridine-cytidine kinase 2 2 2
MIRT553753 TBC1D8 TBC1 domain family member 8 2 2
MIRT554030 SPCS3 signal peptidase complex subunit 3 2 2
MIRT554099 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT554155 SLX4 SLX4 structure-specific endonuclease subunit 2 2
MIRT554815 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT555522 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT555597 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT555632 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 4
MIRT555679 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT555827 PAX9 paired box 9 2 2
MIRT555868 PAIP1 poly(A) binding protein interacting protein 1 2 2
MIRT555939 NUP43 nucleoporin 43 2 2
MIRT555994 NFYB nuclear transcription factor Y subunit beta 2 2
MIRT556340 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT556432 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT556585 LHFPL2 LHFPL tetraspan subfamily member 2 2 4
MIRT556801 KIAA1958 KIAA1958 2 2
MIRT558047 EXOC5 exocyst complex component 5 2 2
MIRT558697 CLTA clathrin light chain A 2 2
MIRT559191 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT559639 AKAP10 A-kinase anchoring protein 10 2 2
MIRT559707 AEN apoptosis enhancing nuclease 2 2
MIRT560673 SRFBP1 serum response factor binding protein 1 2 2
MIRT560990 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT562170 HOXA13 homeobox A13 2 2
MIRT562275 GNAQ G protein subunit alpha q 2 2
MIRT563624 ZNF277 zinc finger protein 277 2 2
MIRT563815 FMN1 formin 1 2 2
MIRT564096 TLR3 toll like receptor 3 2 2
MIRT565320 TMEM41A transmembrane protein 41A 2 2
MIRT565986 RNF44 ring finger protein 44 2 2
MIRT566047 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT568236 C11orf24 chromosome 11 open reading frame 24 2 2
MIRT568310 BAK1 BCL2 antagonist/killer 1 2 2
MIRT572376 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT574822 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 2
MIRT609212 PELP1 proline, glutamate and leucine rich protein 1 2 2
MIRT616217 RBM27 RNA binding motif protein 27 2 2
MIRT629087 FASLG Fas ligand 2 2
MIRT632124 FKBP9 FK506 binding protein 9 2 2
MIRT632576 POLQ DNA polymerase theta 2 2
MIRT634799 ENTHD1 ENTH domain containing 1 2 2
MIRT636553 ESRP1 epithelial splicing regulatory protein 1 2 2
MIRT640977 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT653875 SH2B3 SH2B adaptor protein 3 2 2
MIRT655598 OTUD7B OTU deubiquitinase 7B 2 2
MIRT659764 CCDC171 coiled-coil domain containing 171 2 2
MIRT660744 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT681037 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT682305 RBM28 RNA binding motif protein 28 2 2
MIRT682573 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2 2
MIRT686217 ZNF267 zinc finger protein 267 2 2
MIRT687209 PLXNA3 plexin A3 2 2
MIRT690630 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT692419 AGMAT agmatinase 2 2
MIRT694437 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT700725 PNO1 partner of NOB1 homolog 2 2
MIRT701549 NARF nuclear prelamin A recognition factor 2 2
MIRT704379 DAND5 DAN domain BMP antagonist family member 5 2 2
MIRT707935 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT709939 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT711371 MED7 mediator complex subunit 7 2 2
MIRT712327 PER2 period circadian clock 2 2 2
MIRT714515 SHE Src homology 2 domain containing E 2 2
MIRT715520 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT724294 OSMR oncostatin M receptor 2 2
MIRT725358 MUC21 mucin 21, cell surface associated 2 2
MIRT732242 KLF4 Kruppel like factor 4 3 1
MIRT735384 SPAG5 sperm associated antigen 5 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-367 Medpor NULL NULL Microarray osteoblast-like cells line (MG-63) 18408260 2008 up-regulated
miR-367 Activin A NULL 229455 Quantitative real-time PCR Human embryonic stem (hES) cells 19885849 2010 up-regulated
miR-367 Mistletoe lectin-I NULL NULL Microarray colorectal cancer cells CLY cells 20955366 2011 down-regulated
miR-367 Doxorubicin approved 31703 Quantitative real-time PCR heart 22859947 2012 up-regulated
miR-367 Paclitaxel approved 36314 Microarray Ovarian cancer cell lines 24220856 2014 up-regulated
miR-367 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-367 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Siop Treatment Protocol sensitive High Nephroblastoma tissue
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved resistant High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved sensitive High Hepatocellular Carcinoma tissue and cell line (HepG2)
hsa-miR-367-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (SKhep1, HA22T)
hsa-miR-367-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-367-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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