pre-miRNA Information
pre-miRNA hsa-mir-3123   
Genomic Coordinates chr1: 241132272 - 241132346
Description Homo sapiens miR-3123 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3123
Sequence 49| CAGAGAAUUGUUUAAUC |65
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 1 + 241132323 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1453759221 1 dbSNP
rs968575171 5 dbSNP
rs979407933 9 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol IFNAR1   
Synonyms AVP, IFN-alpha-REC, IFNAR, IFNBR, IFRC
Description interferon alpha and beta receptor subunit 1
Transcript NM_000629   
Expression
Putative miRNA Targets on IFNAR1
3'UTR of IFNAR1
(miRNA target sites are highlighted)
>IFNAR1|NM_000629|3'UTR
   1 CCAGAAATGAACTGTGTCAAGTATAAGGTTTTTCAGCAGGAGTTACACTGGGAGCCTGAGGTCCTCACCTTCCTCTCAGT
  81 AACTACAGAGAGGACGTTTCCCTGTTTAGGGAAAGAAAAAACATCTTCAGATCATAGGTCCTAAAAATACGGGCAAGCTC
 161 TTAACTATTTAAAAATGAAATTACAGGCCCGGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCA
 241 GGCAGATCATGAGGTCAAGAGATCGAGACCAGCCTGGCCAACGTGGTGAAACCCCATCTCTACTAAAAATACAAAAATTA
 321 GCCGGGTGTGGTGGCGCGCGCCTGTTGTCTTAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAAAACAGGAGGTGG
 401 AGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGTGACAGCGTGAGACTCTTTAAAAAAAGAAATTAAAAG
 481 AGTTGAGACAAACGTTTCCTACATTCTTTTCCATGTGTAAAATCATGAAAAAGCCTGTCACCGGACTTGCATTGGATGAG
 561 ATGAGTCAGACCAAAACAGTGGCCACCCGTCTTCCTCCTGTGAGCCTAAGTGCAGCCGTGCTAGCTGCGCACCGTGGCTA
 641 AGGATGACGTCTGTGTTCCTGTCCATCACTGATGCTGCTGGCTACTGCATGTGCCACACCTGTCTGTTCGCCATTCCTAA
 721 CATTCTGTTTCATTCTTCCTCGGGAGATATTTCAAACATTTGGTCTTTTCTTTTAACACTGAGGGTAGGCCCTTAGGAAA
 801 TTTATTTAGGAAAGTCTGAACACGTTATCACTTGGTTTTCTGGAAAGTAGCTTACCCTAGAAAACAGCTGCAAATGCCAG
 881 AAAGATGATCCCTAAAAATGTTGAGGGACTTCTGTTCATTCATCCCGAGAACATTGGCTTCCACATCACAGTATCTACCC
 961 TTACATGGTTTAGGATTAAAGCCAGGCAATCTTTTACTATGCATTAAGACCTCTGATTCAAAACTTATTAGAACAGTAGC
1041 TTCTGCTGGAATTTGCAATCACTGAAGTCATAGAAAATAGGTAACTATCTAATTAGAGAAATAATTGTTGTATTTTAAGA
1121 TCTGAGAGTGTGTACAAGTTTTAGTATACATGCCATGCCAGAAGATAGTGTATGCAAGAAGTCTTGGGACCAGAAAATGG
1201 CAATGATAGGAGACTGACATAGAAGAAGAATGCTTCCCTAGGAAAAAGGTCGCTGGCTTTGGTGCAAGAGGAAGAAGAAT
1281 GTTCCACTGGAAGCCTGAGCACCTAATCAGCTCTCAGTGATCAACCCACTCTTGTTATGGGTGGTCTCTGTCACTTTGAA
1361 TGCCAGGCTGGCTTCTCGTCTAGCAGTATTCAGATACCCCTTCTGCTCAGCCTGCTTGGCGTTAAAATACAAATCATTGA
1441 ACTGAGGGGGAAAAATGTAACTAGGAAGAAAAACCCAATTTAAGAAATTACATAATGCTTTCCAAAGGCACCTACAACTT
1521 AGTTTTAAATTACTTGCTACTGGGGATTACCCATGGATATCCTTAATAGGCAGGAAGTCTGGGAATTCTGGTGGCCTCTA
1601 GGGCAGTGTTCTCACAGCACCGTTCCGACAGGGACCAGTGAAAGAAAAGAGACAAAGTTAGAACGTGCTGGGGAGCGGCC
1681 ATTTCTAAGGCCAGTCTGGTTTAAGTAGTCATTTCTGCTGAAAAAACAGATGATCCTGGTGGAAGAAAAGGTTGAAGGCA
1761 GCTGCCCTCGGGAGGGCTGTGATGCTCGGCACATCCTGCCTGGCACATACACGTGTCTGCAGGCCACACCGTGCATGTCC
1841 CCAGACCTGCCGCCTGGCTTCTGGAGTGCTTCAAGCAGAGCATGGTGGGTCATTGAGGAGACCCAGGAATCTCATCTGAG
1921 AACCCACTCTCTGCCGGAGAACCCCATGGTGACACATTTTCATCTTTCTGACCAGAGGCTGTTTTTTTTTTTTTTTGAGA
2001 CAGTCTCATTCTGTTGCCCAGGCTGGAGTGCAGTGGCTTGATCTCGGCTCACTGCAACCTCGCCTCCCGGGTTCAAGCAA
2081 TTCTCTGCCGCAGCCTCCAGAGTAGCTGGGATAACAGGTGCCCACCACCACACCCCACTAATTTTTGTATTTGTATTTTT
2161 AGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGGACTCCTGACCTCATGCTCCACCCGCTTCGGCCTCCCAA
2241 AGTTCTGGGATTACAGGTGTGAGCCACCGTGCACGGCCGGCCTGACCTTTGGAAAAGCCTTGTCACTTTGGACGTTTGCG
2321 TCTTTGAAGAGGCGATGGGAGCATATCATGACTGCCTGCCACCATTGCTTTTCAGACTACCACAACTCAATCATGCTGTC
2401 CAGGACTTCTGGCCCTGTGTTCACCACTGGGAAAACGTACTTCAGACTGGATAGCCTAAAAAGGAGCAATGCCCTTGTAG
2481 GATGTGGAGAAGGGAAAATACGGACATTAACATTAAAAGACACCAGTGAAATTGTTAGGTCTCTAGGAAGTTGGAGCACA
2561 AGGCTTCACGCTTTAAGACCATCTGTGGTTTTCAGTGAACAAGCGCTGAGCACCAGCAGCAGAAAACAACAACAAAAAAA
2641 CACCTCGTTTTTACCTTGTCTTCTAGACATGAAAAGGCAGTTGCATTCCACTCTGCATTATGTTCTACATGTTGCTTTAT
2721 CAGTATATGCTTAGCTGTAAGTGACAAGTATTTTTTCTGAACAGAAGTTTACTTAGAAATACCATGCACTTGGGGGTACC
2801 AATTAACCGCCTGAAAATTAGCATATTGATAGTTCTTAGAGAGACCAGATATAATCTAAGAATTTATATGAAAGATTTGT
2881 ATCATTAGAGCCAGAAATAATTTTATATTAATATATAATACAGATTAACATTATATATAATATGTACCTGTGTCACTTCT
2961 GACATGAGCCTGTAAACATATATTCATATATGTACCTGCACATGTACCCACCTGATGTAGGTCTTATTCCTTTAGTATGG
3041 ACTTAAAGTACTTATTCATATACCTTGTAACTAAAAATTAGAACAGCTCCCTAGAATTGTGAACTTTTAAGAGTCTGACT
3121 AGAAATTTGCAACTTATAAAAAAGTTACTTTTAAAAATATAAGTTAGGGCTAGGCACAGTGGCTCATGCCTATAATCTCA
3201 GCACTTTTGGGAGGCCAAGACAGGAGGATCACTTCAGGCCAGGAGTTCAAGATCAACCAACCTGGGTAACATGGCCAGAC
3281 CCCATCTCTATTTATATATATATATATAAAACTTAGAGTTTTTATCTTCCCCTAAAAGAGGCCGTGATATTTGCAGCAGC
3361 CTCAAATTGCTCTTAAGGGGTTTAGGTGTGCAGAAGCTTTCCTTTCCCTACCCAGTAACCATGTGACTACTAACGTGGTA
3441 TATTGATTTATTTTGTTTGCTGTCTGTCTCCCCTGCCCCACTGCTGGAACAGAGGCTCCAAGAAAACAGGGACCTTATTA
3521 TTCATTACTGCATCCCCAGTAATGAAAGTACTTAGAAAATAATTATTGAATGAATGAAATCTAAACTGTGAACCTGAGGG
3601 TGTTTGTGGCAGTGTTTGTTTTACTGAATTGTAGAAGGACATAACCGTGTTTTCAGTGTTTCTATGGAACAAACTTGTAC
3681 ATTTTATTTCACTTGTGTTTTGTCTTAAACCCTACTGCTGGAAACAATTTTATGTAATAAGCAATGGGCCCAAAAGTCTA
3761 GGAGTTTTTTTGTACTTAGTGAATTTGTATGCAACAGAGATGCTGCAGCTGATGCCTTTAAAAGGTATTCATCATGGAAG
3841 AGCTGAGGCCTGTGCTTGGTGTTCCAGAGCCCAGGGTTGAGCATCCTGAAGGAGCCACTGCAGCCGTCACTGTCCCCAGA
3921 GCCTGTGGAGATAGAGCCTGTTTGCTGCTTTTTCTTCCCGCTCTTAAGACATGGCTGGAGCTCAGTCTTCATTGAATGAA
4001 GTTTGCTGTGGTATTGCATAGCCTTGCTTTCTTGAACTAAACTGTTTGCCCTTCACAAGTAGTTCTTCTTTCAGGATTAG
4081 TTCGTTCCAAGGAGGCTCTTCAGTCTCACAGATAAGTAGATCTCTCCTGCTGTCTGGACACATTTCACTCGGAAATTGAA
4161 TACAATTTGTATTCAGGCTGGGAACCTGAACACACACTTGTGTTTTTAAGCTTCCCTTTTTTACAGTGGACAAGGACACA
4241 AATAATAAATAAATCATCCCTAATGCCCAAGAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cuAAUUUGUUAAGAGAc 5'
            | ||:||||||||| 
Target 5' gtTCAAGCAATTCTCTg 3'
2071 - 2087 163.00 -16.10
2
miRNA  3' cuaaUUUGUUAAGAGAc 5'
              || | | ||||| 
Target 5' tgagAACCCACTCTCTg 3'
1917 - 1933 117.00 -7.70
3
miRNA  3' cuaaUUUGUUAAGAGAc 5'
              ||||||||:| | 
Target 5' ctggAAACAATTTTATg 3'
3718 - 3734 117.00 -7.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30478871 3 COSMIC
COSN30102275 5 COSMIC
COSN31517856 14 COSMIC
COSN20883064 20 COSMIC
COSN31575015 96 COSMIC
COSN31587775 150 COSMIC
COSN30535123 202 COSMIC
COSN28597266 214 COSMIC
COSN28595926 215 COSMIC
COSN25777488 370 COSMIC
COSN16072659 424 COSMIC
COSN1256014 650 COSMIC
COSN17037460 768 COSMIC
COSN14844420 1557 COSMIC
COSN23835758 1701 COSMIC
COSN7144864 1936 COSMIC
COSN27392773 1997 COSMIC
COSN29988171 1997 COSMIC
COSN6562019 2475 COSMIC
COSN31625883 2529 COSMIC
COSN24933864 3021 COSMIC
COSN7144865 3310 COSMIC
COSN20903875 3325 COSMIC
COSN28059992 3355 COSMIC
COSN17076322 3380 COSMIC
COSN25002599 3502 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs764504109 2 dbSNP
rs754195769 11 dbSNP
rs1438756306 13 dbSNP
rs373783167 15 dbSNP
rs1365305858 19 dbSNP
rs1218355170 24 dbSNP
rs779519839 26 dbSNP
rs113668823 29 dbSNP
rs538060200 43 dbSNP
rs1175071628 45 dbSNP
rs1187737170 45 dbSNP
rs1213254454 47 dbSNP
rs758479250 49 dbSNP
rs780182800 52 dbSNP
rs1803789 53 dbSNP
rs1324923899 65 dbSNP
rs145435605 70 dbSNP
rs1222200370 76 dbSNP
rs1320664874 89 dbSNP
rs1287098178 91 dbSNP
rs368654427 96 dbSNP
rs577930753 97 dbSNP
rs1296331604 101 dbSNP
rs1433366735 102 dbSNP
rs1279713794 103 dbSNP
rs370998223 110 dbSNP
rs1355415360 117 dbSNP
rs1436347496 122 dbSNP
rs1242748412 134 dbSNP
rs544971383 135 dbSNP
rs1430443989 150 dbSNP
rs960884156 151 dbSNP
rs974292658 152 dbSNP
rs1210917158 156 dbSNP
rs992723568 159 dbSNP
rs1427004966 173 dbSNP
rs1191742739 182 dbSNP
rs373265711 192 dbSNP
rs959260190 194 dbSNP
rs990767117 197 dbSNP
rs1483064167 198 dbSNP
rs1381143978 220 dbSNP
rs1441841802 226 dbSNP
rs1314345225 236 dbSNP
rs1161421665 239 dbSNP
rs559919285 251 dbSNP
rs34709725 260 dbSNP
rs949990564 265 dbSNP
rs1290685703 266 dbSNP
rs572101627 279 dbSNP
rs924660967 281 dbSNP
rs934780092 282 dbSNP
rs542398758 283 dbSNP
rs935630603 284 dbSNP
rs1050197233 287 dbSNP
rs1055013542 303 dbSNP
rs561047732 304 dbSNP
rs1394266555 312 dbSNP
rs910292318 313 dbSNP
rs1422989913 323 dbSNP
rs1390245715 324 dbSNP
rs944559637 325 dbSNP
rs1329026585 329 dbSNP
rs1040607884 336 dbSNP
rs531485920 337 dbSNP
rs369489100 338 dbSNP
rs1359104649 339 dbSNP
rs550020631 340 dbSNP
rs887796691 341 dbSNP
rs1310755180 345 dbSNP
rs11910076 347 dbSNP
rs1033753455 356 dbSNP
rs1229543176 362 dbSNP
rs896564502 366 dbSNP
rs1286509242 369 dbSNP
rs1013791120 382 dbSNP
rs11909934 383 dbSNP
rs1459235176 391 dbSNP
rs180879239 395 dbSNP
rs1302422150 396 dbSNP
rs566800437 398 dbSNP
rs1032578683 400 dbSNP
rs1357208612 411 dbSNP
rs1008281211 415 dbSNP
rs1457679093 416 dbSNP
rs957057112 417 dbSNP
rs1036720788 419 dbSNP
rs775257670 424 dbSNP
rs910342882 425 dbSNP
rs1166660451 430 dbSNP
rs1371264018 435 dbSNP
rs1461462917 441 dbSNP
rs1329104927 444 dbSNP
rs1266706783 449 dbSNP
rs1247101351 451 dbSNP
rs762017429 452 dbSNP
rs995297641 456 dbSNP
rs1312362052 459 dbSNP
rs1026809229 471 dbSNP
rs1394476327 471 dbSNP
rs1322323470 472 dbSNP
rs545751758 474 dbSNP
rs1467791493 476 dbSNP
rs1156688136 480 dbSNP
rs1459049108 494 dbSNP
rs147623193 495 dbSNP
rs1024862753 502 dbSNP
rs1421667883 511 dbSNP
rs549171532 518 dbSNP
rs970681564 531 dbSNP
rs929130216 534 dbSNP
rs1049472781 536 dbSNP
rs1396966573 537 dbSNP
rs767477529 542 dbSNP
rs924659035 543 dbSNP
rs956306100 544 dbSNP
rs1325177985 552 dbSNP
rs1227396085 555 dbSNP
rs567427029 557 dbSNP
rs1264911995 563 dbSNP
rs1242631442 573 dbSNP
rs1344616164 574 dbSNP
rs1298515679 579 dbSNP
rs74717635 585 dbSNP
rs184730135 589 dbSNP
rs73364247 590 dbSNP
rs548341877 594 dbSNP
rs1292456746 599 dbSNP
rs766760663 605 dbSNP
rs189766456 607 dbSNP
rs143733167 611 dbSNP
rs1449311566 614 dbSNP
rs571905553 615 dbSNP
rs995659814 616 dbSNP
rs902704935 618 dbSNP
rs1208137224 619 dbSNP
rs1484045517 622 dbSNP
rs1275695008 624 dbSNP
rs1204702794 626 dbSNP
rs369340991 629 dbSNP
rs376697727 630 dbSNP
rs1268175128 633 dbSNP
rs1032629363 634 dbSNP
rs1024833372 635 dbSNP
rs1300425384 644 dbSNP
rs148116497 649 dbSNP
rs999478235 650 dbSNP
rs541360093 652 dbSNP
rs1032087270 665 dbSNP
rs564068044 682 dbSNP
rs1393805463 687 dbSNP
rs754151386 698 dbSNP
rs576221159 700 dbSNP
rs985673227 703 dbSNP
rs1377568438 710 dbSNP
rs990116022 711 dbSNP
rs1017291685 717 dbSNP
rs965714083 721 dbSNP
rs1467305343 723 dbSNP
rs1482210302 724 dbSNP
rs976257147 724 dbSNP
rs1280952554 733 dbSNP
rs373189078 736 dbSNP
rs879808053 738 dbSNP
rs1201968531 739 dbSNP
rs755315656 743 dbSNP
rs1255407627 746 dbSNP
rs1221579009 758 dbSNP
rs577251167 759 dbSNP
rs765815750 761 dbSNP
rs1279330207 764 dbSNP
rs912757171 769 dbSNP
rs1221762631 770 dbSNP
rs1282794504 776 dbSNP
rs1335715210 785 dbSNP
rs77188562 798 dbSNP
rs75956434 799 dbSNP
rs76519737 800 dbSNP
rs944277145 801 dbSNP
rs562615368 810 dbSNP
rs984578155 811 dbSNP
rs753141306 821 dbSNP
rs527914288 822 dbSNP
rs565105451 824 dbSNP
rs17875887 825 dbSNP
rs894874233 826 dbSNP
rs112756879 831 dbSNP
rs1046250289 835 dbSNP
rs541693400 837 dbSNP
rs999768593 841 dbSNP
rs777093176 843 dbSNP
rs1030883426 848 dbSNP
rs746668991 856 dbSNP
rs867562723 857 dbSNP
rs1331181427 862 dbSNP
rs1011508085 868 dbSNP
rs1227258867 883 dbSNP
rs1347901673 910 dbSNP
rs902589823 912 dbSNP
rs186203933 918 dbSNP
rs756933102 919 dbSNP
rs1432211817 922 dbSNP
rs985541859 927 dbSNP
rs17875860 928 dbSNP
rs1156433680 930 dbSNP
rs965537027 934 dbSNP
rs1416011323 935 dbSNP
rs1419414457 937 dbSNP
rs1472602258 939 dbSNP
rs1383576991 940 dbSNP
rs973321162 946 dbSNP
rs1466041822 950 dbSNP
rs1248627860 953 dbSNP
rs527641726 954 dbSNP
rs781159656 959 dbSNP
rs1214981264 971 dbSNP
rs909141 974 dbSNP
rs745695126 975 dbSNP
rs1291375955 989 dbSNP
rs931573454 990 dbSNP
rs1358331712 998 dbSNP
rs1312379174 1000 dbSNP
rs1231097879 1001 dbSNP
rs1362995657 1011 dbSNP
rs1429207214 1015 dbSNP
rs966123173 1029 dbSNP
rs1404771602 1035 dbSNP
rs1383631556 1054 dbSNP
rs370872588 1058 dbSNP
rs1170702305 1063 dbSNP
rs983770894 1082 dbSNP
rs1390526648 1083 dbSNP
rs1185911363 1085 dbSNP
rs1474399028 1099 dbSNP
rs916278734 1102 dbSNP
rs778226688 1105 dbSNP
rs1490028097 1108 dbSNP
rs1289225148 1116 dbSNP
rs1206813034 1123 dbSNP
rs947778506 1124 dbSNP
rs140966052 1125 dbSNP
rs1213133000 1126 dbSNP
rs1370367472 1130 dbSNP
rs374443594 1131 dbSNP
rs1305049424 1133 dbSNP
rs950491878 1136 dbSNP
rs984465271 1137 dbSNP
rs2834200 1145 dbSNP
rs1310133297 1151 dbSNP
rs531718276 1153 dbSNP
rs990713920 1154 dbSNP
rs190977407 1162 dbSNP
rs150199046 1167 dbSNP
rs1407941121 1168 dbSNP
rs1010805268 1169 dbSNP
rs949449886 1170 dbSNP
rs1042389999 1172 dbSNP
rs923899062 1178 dbSNP
rs571545452 1181 dbSNP
rs879031188 1182 dbSNP
rs1483194550 1183 dbSNP
rs1019663999 1185 dbSNP
rs965860898 1189 dbSNP
rs1202880115 1192 dbSNP
rs972903256 1194 dbSNP
rs1053844545 1200 dbSNP
rs1223399781 1201 dbSNP
rs1174982962 1203 dbSNP
rs1290318410 1215 dbSNP
rs1249380179 1219 dbSNP
rs1372879408 1229 dbSNP
rs889978720 1239 dbSNP
rs1007046178 1249 dbSNP
rs1041721170 1250 dbSNP
rs181822544 1252 dbSNP
rs187189466 1253 dbSNP
rs1382509142 1261 dbSNP
rs1423149525 1265 dbSNP
rs1469247072 1279 dbSNP
rs997629017 1284 dbSNP
rs1427061724 1288 dbSNP
rs1472599936 1289 dbSNP
rs982198634 1289 dbSNP
rs1350975231 1297 dbSNP
rs1249453767 1304 dbSNP
rs1175111861 1306 dbSNP
rs1484465503 1307 dbSNP
rs1238390216 1310 dbSNP
rs17875862 1317 dbSNP
rs950399661 1319 dbSNP
rs935098034 1322 dbSNP
rs1229106627 1325 dbSNP
rs1316403966 1332 dbSNP
rs1296582559 1333 dbSNP
rs535836777 1339 dbSNP
rs554641260 1342 dbSNP
rs915109144 1345 dbSNP
rs755004335 1347 dbSNP
rs1403830496 1349 dbSNP
rs1451556582 1349 dbSNP
rs1447844700 1355 dbSNP
rs946630690 1361 dbSNP
rs867339124 1378 dbSNP
rs17875863 1379 dbSNP
rs990605969 1387 dbSNP
rs1025351325 1388 dbSNP
rs747143539 1391 dbSNP
rs1290424388 1393 dbSNP
rs190868571 1400 dbSNP
rs1156553141 1401 dbSNP
rs970673592 1406 dbSNP
rs1041463560 1407 dbSNP
rs543589116 1421 dbSNP
rs901240633 1422 dbSNP
rs1460215229 1436 dbSNP
rs1323504987 1443 dbSNP
rs1201813667 1444 dbSNP
rs994689663 1444 dbSNP
rs1485609056 1446 dbSNP
rs978381736 1447 dbSNP
rs923980465 1452 dbSNP
rs936634523 1456 dbSNP
rs138687780 1457 dbSNP
rs1322554593 1459 dbSNP
rs1314555874 1464 dbSNP
rs116047600 1474 dbSNP
rs1005731695 1476 dbSNP
rs541226708 1482 dbSNP
rs1023864344 1485 dbSNP
rs1384098942 1491 dbSNP
rs1286645225 1499 dbSNP
rs1458934213 1502 dbSNP
rs969646555 1510 dbSNP
rs981780892 1517 dbSNP
rs942878379 1518 dbSNP
rs2834201 1523 dbSNP
rs956472493 1529 dbSNP
rs901296384 1545 dbSNP
rs17875888 1546 dbSNP
rs946520961 1547 dbSNP
rs1050236849 1556 dbSNP
rs1415140482 1557 dbSNP
rs1407621606 1566 dbSNP
rs1220496507 1568 dbSNP
rs772196327 1571 dbSNP
rs1227840442 1572 dbSNP
rs1399592809 1575 dbSNP
rs1293283768 1580 dbSNP
rs886124534 1586 dbSNP
rs542588259 1606 dbSNP
rs146387063 1617 dbSNP
rs531680689 1622 dbSNP
rs533599395 1623 dbSNP
rs1168853883 1625 dbSNP
rs1461746063 1626 dbSNP
rs17875865 1627 dbSNP
rs773127433 1628 dbSNP
rs6517166 1630 dbSNP
rs1024817701 1637 dbSNP
rs1212780161 1640 dbSNP
rs888545493 1640 dbSNP
rs1196174022 1645 dbSNP
rs1338490860 1648 dbSNP
rs1249616836 1650 dbSNP
rs1235289959 1653 dbSNP
rs547771567 1654 dbSNP
rs970941778 1654 dbSNP
rs969614024 1658 dbSNP
rs1351959789 1659 dbSNP
rs1257368334 1662 dbSNP
rs1329098316 1664 dbSNP
rs978055227 1665 dbSNP
rs1199984465 1666 dbSNP
rs1260858044 1667 dbSNP
rs1031318993 1669 dbSNP
rs1470600607 1673 dbSNP
rs138450588 1674 dbSNP
rs771189708 1677 dbSNP
rs776803979 1678 dbSNP
rs911347975 1682 dbSNP
rs1233724873 1692 dbSNP
rs759962711 1694 dbSNP
rs1437061719 1695 dbSNP
rs1248129083 1709 dbSNP
rs532568620 1711 dbSNP
rs770011233 1712 dbSNP
rs765506983 1718 dbSNP
rs987830350 1721 dbSNP
rs1021973040 1723 dbSNP
rs922806904 1724 dbSNP
rs1330594887 1727 dbSNP
rs749564058 1728 dbSNP
rs1237849558 1730 dbSNP
rs547984612 1732 dbSNP
rs910415664 1736 dbSNP
rs944633623 1737 dbSNP
rs1047332752 1739 dbSNP
rs919184270 1742 dbSNP
rs1414172886 1746 dbSNP
rs1334532084 1752 dbSNP
rs1158264278 1755 dbSNP
rs929938294 1762 dbSNP
rs1370380610 1769 dbSNP
rs142945758 1770 dbSNP
rs941739508 1771 dbSNP
rs144316209 1775 dbSNP
rs1448275248 1776 dbSNP
rs1045248917 1788 dbSNP
rs1277408107 1788 dbSNP
rs554602057 1789 dbSNP
rs1003714465 1794 dbSNP
rs1035645304 1799 dbSNP
rs569708931 1801 dbSNP
rs1437877364 1803 dbSNP
rs1012014047 1805 dbSNP
rs1280865771 1806 dbSNP
rs148638441 1807 dbSNP
rs1009166410 1812 dbSNP
rs78206899 1813 dbSNP
rs1021941739 1814 dbSNP
rs1223833201 1826 dbSNP
rs906391581 1830 dbSNP
rs1219404513 1831 dbSNP
rs576894666 1832 dbSNP
rs1384352120 1836 dbSNP
rs182727976 1841 dbSNP
rs553159301 1848 dbSNP
rs1214911620 1850 dbSNP
rs1263098968 1852 dbSNP
rs115068570 1853 dbSNP
rs957937248 1867 dbSNP
rs1444766999 1870 dbSNP
rs1010786770 1875 dbSNP
rs373732954 1887 dbSNP
rs1359239105 1888 dbSNP
rs1290075842 1889 dbSNP
rs764639877 1894 dbSNP
rs541759251 1895 dbSNP
rs778474619 1895 dbSNP
rs1231026710 1904 dbSNP
rs1427340255 1906 dbSNP
rs1270109391 1916 dbSNP
rs1428796441 1918 dbSNP
rs1332872007 1925 dbSNP
rs774831203 1926 dbSNP
rs571167054 1927 dbSNP
rs1018293819 1928 dbSNP
rs563249503 1932 dbSNP
rs374823115 1937 dbSNP
rs922659771 1939 dbSNP
rs951607056 1948 dbSNP
rs1420212701 1954 dbSNP
rs575982040 1957 dbSNP
rs116702860 1974 dbSNP
rs1270389357 1977 dbSNP
rs1199452411 1980 dbSNP
rs369833753 1981 dbSNP
rs745452302 1981 dbSNP
rs929262805 1981 dbSNP
rs1310072322 1982 dbSNP
rs36125058 1982 dbSNP
rs372098571 1982 dbSNP
rs753779784 1982 dbSNP
rs76119037 1982 dbSNP
rs199865593 1983 dbSNP
rs1301246536 1984 dbSNP
rs79979883 1985 dbSNP
rs1329953267 1987 dbSNP
rs1233360473 1988 dbSNP
rs565198676 1989 dbSNP
rs1348182857 1992 dbSNP
rs1266408454 1993 dbSNP
rs865836650 1993 dbSNP
rs1178541049 1997 dbSNP
rs918976444 1998 dbSNP
rs1285822208 1999 dbSNP
rs1202815857 2000 dbSNP
rs532673789 2000 dbSNP
rs1463050960 2001 dbSNP
rs1264237569 2003 dbSNP
rs1355017016 2005 dbSNP
rs1045133174 2006 dbSNP
rs951790285 2012 dbSNP
rs939484575 2019 dbSNP
rs1372813721 2021 dbSNP
rs1056654788 2022 dbSNP
rs1297428056 2023 dbSNP
rs892694398 2033 dbSNP
rs762238324 2036 dbSNP
rs941624672 2037 dbSNP
rs1426556781 2038 dbSNP
rs1160587803 2039 dbSNP
rs1419332925 2040 dbSNP
rs1021909233 2045 dbSNP
rs1175861913 2046 dbSNP
rs903570079 2047 dbSNP
rs1244367109 2048 dbSNP
rs1203556172 2051 dbSNP
rs1007183686 2052 dbSNP
rs1055944303 2056 dbSNP
rs1262591993 2058 dbSNP
rs1017739098 2060 dbSNP
rs547654904 2065 dbSNP
rs1237767273 2068 dbSNP
rs17875867 2069 dbSNP
rs1157795081 2070 dbSNP
rs1451849110 2071 dbSNP
rs1399927019 2072 dbSNP
rs781055678 2081 dbSNP
rs1421309883 2084 dbSNP
rs1453779241 2088 dbSNP
rs368661189 2090 dbSNP
rs567675912 2091 dbSNP
rs1026175168 2092 dbSNP
rs548860446 2107 dbSNP
rs1183319927 2109 dbSNP
rs1443362615 2110 dbSNP
rs906269128 2115 dbSNP
rs999403132 2116 dbSNP
rs1052268487 2117 dbSNP
rs1333602189 2118 dbSNP
rs893607322 2119 dbSNP
rs1259258606 2122 dbSNP
rs909130931 2126 dbSNP
rs1445639516 2129 dbSNP
rs1360374536 2132 dbSNP
rs962666704 2134 dbSNP
rs1244884938 2136 dbSNP
rs980779519 2138 dbSNP
rs1297619448 2141 dbSNP
rs1382362495 2144 dbSNP
rs1360623447 2180 dbSNP
rs1296015856 2183 dbSNP
rs1426188160 2188 dbSNP
rs1242769197 2191 dbSNP
rs1163347773 2213 dbSNP
rs1264196615 2215 dbSNP
rs1456663053 2218 dbSNP
rs17875868 2222 dbSNP
rs17875869 2226 dbSNP
rs1244688648 2227 dbSNP
rs755946029 2232 dbSNP
rs1201631896 2233 dbSNP
rs34579816 2236 dbSNP
rs552219743 2238 dbSNP
rs1029787609 2250 dbSNP
rs1239031051 2262 dbSNP
rs951550095 2266 dbSNP
rs982853247 2269 dbSNP
rs570440902 2270 dbSNP
rs962829554 2275 dbSNP
rs1367807121 2276 dbSNP
rs1275792843 2279 dbSNP
rs534760057 2280 dbSNP
rs1007152534 2288 dbSNP
rs531173369 2290 dbSNP
rs916151650 2303 dbSNP
rs1393646057 2305 dbSNP
rs1399049392 2310 dbSNP
rs1038720161 2314 dbSNP
rs901576364 2315 dbSNP
rs1422023156 2320 dbSNP
rs947783016 2321 dbSNP
rs1378733686 2327 dbSNP
rs1046482686 2334 dbSNP
rs927611332 2338 dbSNP
rs1026563394 2340 dbSNP
rs1311088148 2341 dbSNP
rs546129566 2349 dbSNP
rs1449704087 2355 dbSNP
rs935081509 2365 dbSNP
rs1052153111 2376 dbSNP
rs1006065507 2379 dbSNP
rs1480272344 2386 dbSNP
rs1256015138 2400 dbSNP
rs188247519 2402 dbSNP
rs1323625010 2403 dbSNP
rs1455363006 2411 dbSNP
rs1286488594 2421 dbSNP
rs1282290992 2427 dbSNP
rs1230632143 2434 dbSNP
rs1337117841 2435 dbSNP
rs550470747 2437 dbSNP
rs535271547 2438 dbSNP
rs1398811112 2441 dbSNP
rs1198094102 2443 dbSNP
rs17875889 2448 dbSNP
rs899739337 2452 dbSNP
rs1405412971 2454 dbSNP
rs1170844648 2456 dbSNP
rs1459305389 2464 dbSNP
rs536130255 2467 dbSNP
rs1198492687 2470 dbSNP
rs998074832 2476 dbSNP
rs1030084742 2485 dbSNP
rs887087017 2487 dbSNP
rs1004272944 2491 dbSNP
rs145323256 2496 dbSNP
rs575324147 2502 dbSNP
rs1477205449 2503 dbSNP
rs1461421243 2504 dbSNP
rs1261975614 2505 dbSNP
rs1170837824 2506 dbSNP
rs991611779 2515 dbSNP
rs1023257224 2522 dbSNP
rs972058302 2524 dbSNP
rs1464263187 2526 dbSNP
rs1352428053 2527 dbSNP
rs1279750433 2528 dbSNP
rs981681205 2537 dbSNP
rs1375143144 2548 dbSNP
rs992296462 2551 dbSNP
rs1453998356 2554 dbSNP
rs1382604206 2555 dbSNP
rs913978806 2556 dbSNP
rs927630173 2557 dbSNP
rs1402470010 2561 dbSNP
rs934986515 2564 dbSNP
rs987911527 2570 dbSNP
rs147639443 2571 dbSNP
rs1336642185 2572 dbSNP
rs1185136135 2573 dbSNP
rs925519309 2573 dbSNP
rs17875870 2576 dbSNP
rs1236784421 2582 dbSNP
rs1218077634 2588 dbSNP
rs1448194251 2595 dbSNP
rs1284603097 2598 dbSNP
rs142233198 2606 dbSNP
rs778797872 2607 dbSNP
rs1350978777 2611 dbSNP
rs747133587 2614 dbSNP
rs1294407912 2615 dbSNP
rs1039561407 2616 dbSNP
rs901548053 2620 dbSNP
rs997593443 2625 dbSNP
rs1433025494 2626 dbSNP
rs1327094123 2633 dbSNP
rs1317969569 2635 dbSNP
rs899632214 2637 dbSNP
rs1047438053 2641 dbSNP
rs1483424152 2642 dbSNP
rs149720401 2647 dbSNP
rs1425041844 2648 dbSNP
rs1413035164 2654 dbSNP
rs1260915245 2659 dbSNP
rs1487947744 2664 dbSNP
rs1193713095 2667 dbSNP
rs933915128 2670 dbSNP
rs190206571 2678 dbSNP
rs1487122117 2685 dbSNP
rs1430973410 2700 dbSNP
rs887132688 2708 dbSNP
rs1456972953 2709 dbSNP
rs1270531043 2710 dbSNP
rs1004159496 2715 dbSNP
rs1017009371 2720 dbSNP
rs898584543 2724 dbSNP
rs1174843986 2726 dbSNP
rs1006032902 2727 dbSNP
rs1288427222 2728 dbSNP
rs553257105 2738 dbSNP
rs1012913461 2740 dbSNP
rs182824129 2749 dbSNP
rs905768151 2759 dbSNP
rs1216826605 2763 dbSNP
rs563939470 2772 dbSNP
rs1303954503 2775 dbSNP
rs145551344 2786 dbSNP
rs551880827 2790 dbSNP
rs960701695 2794 dbSNP
rs1411595209 2797 dbSNP
rs570466476 2799 dbSNP
rs956388431 2803 dbSNP
rs1476541245 2804 dbSNP
rs1431024941 2806 dbSNP
rs756824375 2809 dbSNP
rs376582904 2810 dbSNP
rs766023445 2822 dbSNP
rs1020966933 2826 dbSNP
rs539939163 2837 dbSNP
rs141601938 2838 dbSNP
rs966785198 2838 dbSNP
rs17875871 2841 dbSNP
rs946457997 2843 dbSNP
rs1257958739 2849 dbSNP
rs1216922041 2850 dbSNP
rs1410784120 2853 dbSNP
rs1325759121 2857 dbSNP
rs925488236 2859 dbSNP
rs576408030 2860 dbSNP
rs1218879490 2869 dbSNP
rs754808718 2880 dbSNP
rs187251041 2892 dbSNP
rs974983452 2897 dbSNP
rs1355090976 2900 dbSNP
rs1330553944 2902 dbSNP
rs1463664408 2903 dbSNP
rs568085067 2910 dbSNP
rs1352752317 2911 dbSNP
rs1432235017 2920 dbSNP
rs1422564776 2922 dbSNP
rs1179372215 2927 dbSNP
rs1470700796 2930 dbSNP
rs1238175787 2932 dbSNP
rs535237861 2935 dbSNP
rs923524613 2938 dbSNP
rs759620771 2945 dbSNP
rs746935281 2964 dbSNP
rs887025282 2970 dbSNP
rs1310688285 2973 dbSNP
rs570138947 2978 dbSNP
rs941789809 2990 dbSNP
rs556770379 2995 dbSNP
rs1308516418 2996 dbSNP
rs940066060 2999 dbSNP
rs1267597553 3000 dbSNP
rs149169161 3010 dbSNP
rs1465091455 3017 dbSNP
rs1001777426 3018 dbSNP
rs1160837359 3021 dbSNP
rs1288166238 3024 dbSNP
rs770203234 3027 dbSNP
rs572754707 3034 dbSNP
rs1175886521 3036 dbSNP
rs201930239 3045 dbSNP
rs35166284 3045 dbSNP
rs539395925 3045 dbSNP
rs1013565802 3046 dbSNP
rs558672619 3048 dbSNP
rs1348841644 3049 dbSNP
rs1216750484 3050 dbSNP
rs1044460055 3051 dbSNP
rs868330703 3054 dbSNP
rs979525288 3056 dbSNP
rs1285044755 3064 dbSNP
rs1237637307 3065 dbSNP
rs1159723290 3066 dbSNP
rs763541266 3068 dbSNP
rs964870893 3072 dbSNP
rs1293062888 3074 dbSNP
rs1376331275 3080 dbSNP
rs1290058232 3085 dbSNP
rs1400235721 3087 dbSNP
rs1368530134 3092 dbSNP
rs2834202 3100 dbSNP
rs541070791 3101 dbSNP
rs956272015 3104 dbSNP
rs1164684107 3108 dbSNP
rs1422195418 3114 dbSNP
rs553406730 3114 dbSNP
rs1375797869 3124 dbSNP
rs12627216 3133 dbSNP
rs1187111085 3137 dbSNP
rs923523115 3137 dbSNP
rs1011802356 3139 dbSNP
rs1214234253 3144 dbSNP
rs1240605686 3147 dbSNP
rs1288072312 3148 dbSNP
rs983104764 3151 dbSNP
rs1266024668 3160 dbSNP
rs1243996374 3161 dbSNP
rs1220159738 3162 dbSNP
rs907575928 3164 dbSNP
rs941760096 3166 dbSNP
rs555718535 3172 dbSNP
rs967682946 3173 dbSNP
rs975591943 3178 dbSNP
rs1295928697 3180 dbSNP
rs1489194602 3184 dbSNP
rs921011372 3187 dbSNP
rs1037418603 3188 dbSNP
rs1293242298 3189 dbSNP
rs1237203325 3190 dbSNP
rs1439404498 3198 dbSNP
rs752104734 3201 dbSNP
rs1410769047 3205 dbSNP
rs1171501261 3206 dbSNP
rs1477521108 3217 dbSNP
rs986649677 3219 dbSNP
rs1421847451 3221 dbSNP
rs1422619925 3228 dbSNP
rs908346215 3229 dbSNP
rs937161170 3236 dbSNP
rs1057379916 3240 dbSNP
rs1010602733 3254 dbSNP
rs35533087 3254 dbSNP
rs1463090956 3257 dbSNP
rs1042366705 3265 dbSNP
rs1316743627 3275 dbSNP
rs1399928195 3287 dbSNP
rs1275971136 3289 dbSNP
rs902483385 3291 dbSNP
rs1000828828 3293 dbSNP
rs375942471 3293 dbSNP
rs776509902 3293 dbSNP
rs778480069 3293 dbSNP
rs542428107 3295 dbSNP
rs919944220 3297 dbSNP
rs1478498236 3299 dbSNP
rs1281120740 3304 dbSNP
rs1197966532 3307 dbSNP
rs996339592 3307 dbSNP
rs1030943468 3308 dbSNP
rs1227635537 3308 dbSNP
rs34394035 3308 dbSNP
rs34774717 3309 dbSNP
rs948702633 3310 dbSNP
rs983744851 3321 dbSNP
rs1255612148 3333 dbSNP
rs1044903060 3344 dbSNP
rs907275877 3345 dbSNP
rs1257030458 3348 dbSNP
rs1289453445 3351 dbSNP
rs563902789 3361 dbSNP
rs1199627056 3362 dbSNP
rs1310379357 3366 dbSNP
rs1053293495 3371 dbSNP
rs1375277242 3373 dbSNP
rs1338809249 3379 dbSNP
rs1234916082 3394 dbSNP
rs73900320 3398 dbSNP
rs1171030812 3403 dbSNP
rs1464407453 3413 dbSNP
rs1381951742 3428 dbSNP
rs1011854426 3434 dbSNP
rs1021867791 3435 dbSNP
rs574684077 3436 dbSNP
rs996519638 3444 dbSNP
rs1236232738 3446 dbSNP
rs374091642 3447 dbSNP
rs1028531908 3461 dbSNP
rs1255119373 3463 dbSNP
rs1198387780 3465 dbSNP
rs1352315857 3467 dbSNP
rs1287232706 3480 dbSNP
rs1239814701 3499 dbSNP
rs1352215534 3504 dbSNP
rs1317741571 3509 dbSNP
rs1168690848 3513 dbSNP
rs1332209292 3514 dbSNP
rs1423154371 3517 dbSNP
rs955155831 3519 dbSNP
rs904459880 3535 dbSNP
rs1418837781 3544 dbSNP
rs986923345 3563 dbSNP
rs1164919625 3567 dbSNP
rs908394673 3572 dbSNP
rs961169216 3579 dbSNP
rs1331167230 3587 dbSNP
rs1357166510 3591 dbSNP
rs973982902 3592 dbSNP
rs919829001 3595 dbSNP
rs900570030 3600 dbSNP
rs948763207 3603 dbSNP
rs1044398490 3608 dbSNP
rs146173990 3613 dbSNP
rs761644540 3633 dbSNP
rs1303292421 3636 dbSNP
rs928586821 3638 dbSNP
rs1357368989 3642 dbSNP
rs564625307 3647 dbSNP
rs1216245657 3648 dbSNP
rs1263428657 3655 dbSNP
rs1277059460 3656 dbSNP
rs1053170289 3665 dbSNP
rs996700494 3671 dbSNP
rs528060580 3673 dbSNP
rs1487510716 3685 dbSNP
rs1030498687 3707 dbSNP
rs1229406178 3713 dbSNP
rs1282531317 3723 dbSNP
rs1318034047 3723 dbSNP
rs369184342 3726 dbSNP
rs1229637759 3727 dbSNP
rs955006749 3735 dbSNP
rs1182607388 3737 dbSNP
rs1297785117 3741 dbSNP
rs1399237287 3757 dbSNP
rs1005064648 3765 dbSNP
rs1325206250 3765 dbSNP
rs201377090 3765 dbSNP
rs1389870847 3770 dbSNP
rs891993841 3773 dbSNP
rs1478499351 3784 dbSNP
rs750101028 3787 dbSNP
rs1423980785 3796 dbSNP
rs963643530 3806 dbSNP
rs1476602613 3818 dbSNP
rs1248823228 3819 dbSNP
rs947525296 3820 dbSNP
rs1451557233 3826 dbSNP
rs546293379 3826 dbSNP
rs900754595 3828 dbSNP
rs1486968929 3829 dbSNP
rs996795299 3831 dbSNP
rs1027999680 3832 dbSNP
rs567798953 3837 dbSNP
rs1250878794 3843 dbSNP
rs1478203245 3870 dbSNP
rs1007993285 3873 dbSNP
rs917014003 3876 dbSNP
rs1347581061 3877 dbSNP
rs150679180 3879 dbSNP
rs1276423222 3885 dbSNP
rs1436905679 3887 dbSNP
rs745923629 3891 dbSNP
rs1015277569 3905 dbSNP
rs945853927 3906 dbSNP
rs1400406079 3907 dbSNP
rs1041549455 3911 dbSNP
rs1463762856 3912 dbSNP
rs1426771421 3915 dbSNP
rs961221252 3928 dbSNP
rs1377178064 3929 dbSNP
rs1477884579 3937 dbSNP
rs528982134 3938 dbSNP
rs779921346 3950 dbSNP
rs1026896536 3955 dbSNP
rs1181034655 3956 dbSNP
rs970002918 3960 dbSNP
rs1257542209 3961 dbSNP
rs1053782741 3963 dbSNP
rs116519917 3972 dbSNP
rs928672012 3979 dbSNP
rs1300912618 3981 dbSNP
rs754770419 3982 dbSNP
rs1448910169 3987 dbSNP
rs938662980 3993 dbSNP
rs1330120201 3995 dbSNP
rs778889888 4012 dbSNP
rs988924361 4016 dbSNP
rs913312565 4019 dbSNP
rs748066350 4020 dbSNP
rs1432290614 4021 dbSNP
rs1176323289 4022 dbSNP
rs1272711090 4023 dbSNP
rs541718416 4028 dbSNP
rs769954721 4043 dbSNP
rs947576889 4048 dbSNP
rs867175148 4056 dbSNP
rs1218983594 4063 dbSNP
rs1281543587 4066 dbSNP
rs1440875857 4070 dbSNP
rs775762544 4074 dbSNP
rs2843998 4075 dbSNP
rs1043250818 4080 dbSNP
rs1176897670 4083 dbSNP
rs900636210 4084 dbSNP
rs372169087 4085 dbSNP
rs1209700567 4096 dbSNP
rs1310592626 4098 dbSNP
rs932266641 4099 dbSNP
rs1241986152 4102 dbSNP
rs1354386012 4112 dbSNP
rs1308400189 4120 dbSNP
rs771011916 4121 dbSNP
rs1389242410 4124 dbSNP
rs117070822 4133 dbSNP
rs899403228 4138 dbSNP
rs1446879950 4141 dbSNP
rs1300490686 4151 dbSNP
rs746136401 4152 dbSNP
rs1157370982 4164 dbSNP
rs1263121485 4166 dbSNP
rs1034608820 4179 dbSNP
rs539267915 4186 dbSNP
rs1482411479 4188 dbSNP
rs76779730 4189 dbSNP
rs1024448976 4193 dbSNP
rs967121530 4195 dbSNP
rs1285289616 4196 dbSNP
rs1236804575 4197 dbSNP
rs977210346 4223 dbSNP
rs566677495 4239 dbSNP
rs1417643695 4241 dbSNP
rs1227226483 4248 dbSNP
rs1183173769 4256 dbSNP
rs896906053 4258 dbSNP
rs995176838 4259 dbSNP
rs117254882 4260 dbSNP
rs1361160960 4271 dbSNP
rs1360304584 4292 dbSNP
rs1401924087 4303 dbSNP
rs1459924059 4306 dbSNP
rs970266981 4309 dbSNP
rs980066487 4316 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 3454.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cuAAUUUGUUAAGAGAc 5'
            | ||:||||||||| 
Target 5' guUCAAGCAAUUCUCUg 3'
24 - 40
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cuAAUUUGUUAAGAGAc 5'
            | ||:||||||||| 
Target 5' guUCAAGCAAUUCUCUg 3'
31 - 47
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000270139.3 | 3UTR | CUCACUGCAACCUCGCCUCCCGGGUUCAAGCAAUUCUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000270139.3 | 3UTR | AUCUCGGCUCACUGCAACCUCGCCUCCCGGGUUCAAGCAAUUCUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
113 hsa-miR-3123 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058369 TBCEL tubulin folding cofactor E like 2 4
MIRT059816 EFNA1 ephrin A1 2 2
MIRT066850 TMEM19 transmembrane protein 19 2 2
MIRT071503 CALM1 calmodulin 1 2 6
MIRT073758 NUBP1 nucleotide binding protein 1 2 2
MIRT074324 TNRC6A trinucleotide repeat containing 6A 2 10
MIRT094805 LMNB1 lamin B1 2 2
MIRT099173 MAP3K4 mitogen-activated protein kinase kinase kinase 4 2 2
MIRT099545 ID4 inhibitor of DNA binding 4, HLH protein 2 2
MIRT122643 E2F3 E2F transcription factor 3 2 2
MIRT180918 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 8
MIRT192844 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT224984 BAG4 BCL2 associated athanogene 4 2 2
MIRT246065 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT357085 PRRC1 proline rich coiled-coil 1 2 2
MIRT378170 C5ORF51 chromosome 5 open reading frame 51 2 2
MIRT441636 KDM5A lysine demethylase 5A 2 2
MIRT441802 BCAS1 breast carcinoma amplified sequence 1 2 2
MIRT443019 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443445 SERPINB4 serpin family B member 4 2 2
MIRT443661 SERPINB3 serpin family B member 3 2 2
MIRT443776 STS steroid sulfatase 2 2
MIRT444663 TSPAN14 tetraspanin 14 2 2
MIRT444924 KIAA1522 KIAA1522 2 2
MIRT445378 FOXO1 forkhead box O1 2 2
MIRT447920 PAIP2B poly(A) binding protein interacting protein 2B 2 2
MIRT449202 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT449713 TSPYL1 TSPY like 1 2 2
MIRT450403 TMEM47 transmembrane protein 47 2 2
MIRT450787 PAPOLG poly(A) polymerase gamma 2 2
MIRT451381 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT452507 WDR1 WD repeat domain 1 2 2
MIRT453264 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT454642 FAM83H family with sequence similarity 83 member H 2 2
MIRT455513 C6orf106 chromosome 6 open reading frame 106 2 2
MIRT456709 LDB1 LIM domain binding 1 2 2
MIRT457231 AP3D1 adaptor related protein complex 3 delta 1 subunit 2 2
MIRT459235 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT460553 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT461424 CTSL2 cathepsin V 2 3
MIRT462869 CYP51A1 cytochrome P450 family 51 subfamily A member 1 2 2
MIRT467178 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT469233 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT474125 LIPC lipase C, hepatic type 2 2
MIRT475509 HSP90B1 heat shock protein 90 beta family member 1 2 4
MIRT478134 DHX36 DEAH-box helicase 36 2 2
MIRT481326 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 2 2
MIRT482003 AMOTL2 angiomotin like 2 2 2
MIRT482230 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT483436 RHOXF2B Rhox homeobox family member 2B 2 2
MIRT483824 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT492051 TNFSF9 TNF superfamily member 9 2 2
MIRT494114 DLX6 distal-less homeobox 6 2 2
MIRT498882 ZNF12 zinc finger protein 12 2 10
MIRT499674 NPHP3 nephrocystin 3 2 2
MIRT506932 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT509461 ZNF587 zinc finger protein 587 2 6
MIRT510048 AKR1B10 aldo-keto reductase family 1 member B10 2 4
MIRT514807 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT515217 CRCP CGRP receptor component 2 2
MIRT515486 INCENP inner centromere protein 2 4
MIRT517765 ZNF366 zinc finger protein 366 2 4
MIRT518216 TRMT10B tRNA methyltransferase 10B 2 2
MIRT519602 ZNF805 zinc finger protein 805 2 2
MIRT523570 GGCX gamma-glutamyl carboxylase 2 4
MIRT525795 SOD2 superoxide dismutase 2 2 2
MIRT533055 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT534218 SLC37A3 solute carrier family 37 member 3 2 4
MIRT535633 NR2E1 nuclear receptor subfamily 2 group E member 1 2 2
MIRT535863 MRPL17 mitochondrial ribosomal protein L17 2 2
MIRT536344 LEFTY1 left-right determination factor 1 2 2
MIRT537923 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT543114 SKA2 spindle and kinetochore associated complex subunit 2 2 2
MIRT544717 ZNF529 zinc finger protein 529 2 2
MIRT544847 BASP1 brain abundant membrane attached signal protein 1 2 4
MIRT545536 ARF3 ADP ribosylation factor 3 2 2
MIRT547124 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT548070 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT548446 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 2
MIRT548626 DAZAP1 DAZ associated protein 1 2 4
MIRT550259 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT551940 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552511 ZIK1 zinc finger protein interacting with K protein 1 2 4
MIRT554015 SPIRE1 spire type actin nucleation factor 1 2 2
MIRT556647 KPNA2 karyopherin subunit alpha 2 2 4
MIRT559744 ACOX1 acyl-CoA oxidase 1 2 2
MIRT560393 TMEM254 transmembrane protein 254 2 2
MIRT562234 HMGB2 high mobility group box 2 2 2
MIRT563325 ORC4 origin recognition complex subunit 4 2 2
MIRT563697 RPS26 ribosomal protein S26 2 2
MIRT565066 USP25 ubiquitin specific peptidase 25 2 2
MIRT565349 TMED2 transmembrane p24 trafficking protein 2 2 2
MIRT565624 SLC31A1 solute carrier family 31 member 1 2 2
MIRT566379 PNISR PNN interacting serine and arginine rich protein 2 2
MIRT567575 FEM1C fem-1 homolog C 2 2
MIRT569383 DDX20 DEAD-box helicase 20 2 2
MIRT570037 FAM228A family with sequence similarity 228 member A 2 2
MIRT573269 DCAF10 DDB1 and CUL4 associated factor 10 2 2
MIRT573912 PARP1 poly(ADP-ribose) polymerase 1 2 2
MIRT620034 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT635606 ZWILCH zwilch kinetochore protein 2 2
MIRT644413 FRMD6 FERM domain containing 6 2 2
MIRT652528 TM9SF4 transmembrane 9 superfamily member 4 2 2
MIRT656238 MFSD6 major facilitator superfamily domain containing 6 2 2
MIRT661373 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT662530 PNPLA4 patatin like phospholipase domain containing 4 2 2
MIRT675551 MALL mal, T-cell differentiation protein like 2 2
MIRT693650 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT696348 SLC35D2 solute carrier family 35 member D2 2 2
MIRT705815 AKNA AT-hook transcription factor 2 2
MIRT707632 TARDBP TAR DNA binding protein 2 2
MIRT717902 COPS8 COP9 signalosome subunit 8 2 2
MIRT723626 SOBP sine oculis binding protein homolog 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3123 Doxorubicin 31703 NSC123127 approved sensitive High Triple-Negative Breast Cancer cell line (MDA-MB-231, MDA-MB-468)
hsa-mir-3123 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3123 Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-3123 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3123 Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)

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