pre-miRNA Information
pre-miRNA hsa-mir-4524a   
Genomic Coordinates chr17: 69099564 - 69099632
Description Homo sapiens miR-4524a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4524a-5p
Sequence 6| AUAGCAGCAUGAACCUGUCUCA |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1322445998 8 dbSNP
rs1350790266 13 dbSNP
rs1263495678 21 dbSNP
Putative Targets

Gene Information
Gene Symbol ACTR3B   
Synonyms ARP11, ARP3BETA
Description ARP3 actin related protein 3 homolog B
Transcript NM_001040135   
Other Transcripts NM_020445   
Expression
Putative miRNA Targets on ACTR3B
3'UTR of ACTR3B
(miRNA target sites are highlighted)
>ACTR3B|NM_001040135|3'UTR
   1 TGTCTGCCTGAACGCGTCGTTCGATGGTGTCACGTTGGGGAACAAGTGTCCTTCAGAACCCAGAGAAGGCCGCCGTTCTG
  81 TAAATAGCGACGTCGGTGTTGCTGCCCAGCAGCGTGCTTGCATTGCCGGTGCATGAGGCGCGGCGCGGGCCCTTCAGTAA
 161 AAGCCATTTATCCGTGTGCCGACCGCTGTCTGCCAGCCTCCTCCTTCTCCCGCCCTCCTCACCCTCGCTCTCCCTCCTCC
 241 TCCTCCTCCGAGCTGCTAGCTGACAAATACAATTCTGAAGGAATCCAAATGTGACTTTGAAAATTGTTAGAGAAAACAAC
 321 ATTAGAAAATGGCGCAAAATCGTTAGGTCCCAGGAGAGAATGTGGGGGCGCAAACCCTTTTCCTCCCAGCCTATTTTTGT
 401 AAATAAAATGTTTAAACTTGAAATACAAATCGATGTTTATATTTCCTATCATTTTGTATTTTATGGTATTTGGTACAACT
 481 GGCTGATACTAAGCACGAATAGATATTGATGTTATGGAGTGCTGTAATCCAAAGTTTTTAATTGTGAGGCATGTTCTGAT
 561 ATGTTTATAGGCAAACAAATAAAACAGCAAACTTTTTTGCCACATGTTTGCTAGAAAATGATTATACTTTATTGGAGTGA
 641 CATGAAGTTTGAACACTAAACAGTAATGTATGAGAATTACTACAGATACATGTATCTTTTAGTTTTTTTTGTTTGAACTT
 721 TCTGGAGCTGTTTTATAGAAGATGATGGTTTGTTGTCGGTGAGTGTTGGATGAAATACTTCCTTGCACCATTGTAATAAA
 801 AGCTGTTAGAATATTTGTAAATATCTAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acucuguccAAGUACGACGAUa 5'
                   | |: ||||||| 
Target 5' tcctcctccTCCGAGCTGCTAg 3'
238 - 259 145.00 -9.50
2
miRNA  3' acucuguccaagUACGACGAUa 5'
                      | ||||:|| 
Target 5' ccattgtaataaAAGCTGTTAg 3'
788 - 809 126.00 -6.60
3
miRNA  3' acUCUGUCCAAGUACGACGAUa 5'
            ||  | ||  :||:||||: 
Target 5' atAGCGACGTCGGTGTTGCTGc 3'
84 - 105 124.00 -14.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN22177850 8 COSMIC
COSN30137786 14 COSMIC
COSN19671987 19 COSMIC
COSN30495100 20 COSMIC
COSN26964998 24 COSMIC
COSN28223872 27 COSMIC
COSN26964999 34 COSMIC
COSN4894029 70 COSMIC
COSN14273436 76 COSMIC
COSN30105208 90 COSMIC
COSN30528465 140 COSMIC
COSN30539361 141 COSMIC
COSN30106886 142 COSMIC
COSN31485296 143 COSMIC
COSN30167895 157 COSMIC
COSN1345688 236 COSMIC
COSN7969213 243 COSMIC
COSN1345689 382 COSMIC
COSN30175920 390 COSMIC
COSN6358760 480 COSMIC
COSN31536468 503 COSMIC
COSN21502176 545 COSMIC
COSN30542659 599 COSMIC
COSN7969214 611 COSMIC
COSN31542695 686 COSMIC
COSN28665473 760 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs756444090 7 dbSNP
rs144608640 14 dbSNP
rs376102692 15 dbSNP
rs778301772 16 dbSNP
rs771970905 17 dbSNP
rs377688816 19 dbSNP
rs752545388 20 dbSNP
rs1249449510 23 dbSNP
rs1480197469 24 dbSNP
rs1236536011 25 dbSNP
rs770872299 30 dbSNP
rs1408732778 31 dbSNP
rs1244895928 34 dbSNP
rs371526661 35 dbSNP
rs373617906 36 dbSNP
rs1377408077 41 dbSNP
rs1393563770 42 dbSNP
rs768908419 43 dbSNP
rs774359081 46 dbSNP
rs367789719 47 dbSNP
rs1041387292 48 dbSNP
rs377449083 50 dbSNP
rs558325298 51 dbSNP
rs774724016 52 dbSNP
rs1273793034 61 dbSNP
rs914548418 65 dbSNP
rs946138676 72 dbSNP
rs999794991 73 dbSNP
rs758128650 75 dbSNP
rs1233146595 77 dbSNP
rs1373541902 89 dbSNP
rs758948012 92 dbSNP
rs764154405 93 dbSNP
rs902041574 95 dbSNP
rs1314008743 99 dbSNP
rs1437060925 107 dbSNP
rs573400192 114 dbSNP
rs779492260 115 dbSNP
rs1173360718 120 dbSNP
rs1192535564 123 dbSNP
rs1050704249 127 dbSNP
rs540833114 128 dbSNP
rs117268662 129 dbSNP
rs1175599470 133 dbSNP
rs1469690183 135 dbSNP
rs529567291 139 dbSNP
rs1427726127 140 dbSNP
rs1023710986 141 dbSNP
rs1017024794 142 dbSNP
rs1459805604 143 dbSNP
rs541390295 145 dbSNP
rs1317182628 146 dbSNP
rs756803293 147 dbSNP
rs1221633573 148 dbSNP
rs11103 151 dbSNP
rs918598814 157 dbSNP
rs530501255 161 dbSNP
rs1354061051 165 dbSNP
rs1025337299 167 dbSNP
rs1431898195 168 dbSNP
rs1347244572 172 dbSNP
rs1157183622 173 dbSNP
rs1400286651 174 dbSNP
rs1361474545 175 dbSNP
rs755806147 176 dbSNP
rs1255277374 179 dbSNP
rs981239466 180 dbSNP
rs182137136 181 dbSNP
rs942581642 182 dbSNP
rs780449321 183 dbSNP
rs1213218669 185 dbSNP
rs1464130050 186 dbSNP
rs187242851 189 dbSNP
rs1451704908 198 dbSNP
rs1223062696 199 dbSNP
rs1312633450 200 dbSNP
rs1215586091 202 dbSNP
rs1240015808 203 dbSNP
rs1430300850 207 dbSNP
rs779506539 207 dbSNP
rs990057961 208 dbSNP
rs914578551 212 dbSNP
rs1194203382 214 dbSNP
rs1459934159 222 dbSNP
rs1041459312 224 dbSNP
rs191862750 228 dbSNP
rs148492658 229 dbSNP
rs1184509561 231 dbSNP
rs1215097177 233 dbSNP
rs368701446 233 dbSNP
rs374373895 233 dbSNP
rs567703179 233 dbSNP
rs967390997 234 dbSNP
rs749728009 235 dbSNP
rs568327048 243 dbSNP
rs369090329 250 dbSNP
rs868337676 251 dbSNP
rs1372084355 254 dbSNP
rs1407179847 259 dbSNP
rs923347106 263 dbSNP
rs1156943848 264 dbSNP
rs1438904305 265 dbSNP
rs933352343 267 dbSNP
rs1390113995 269 dbSNP
rs1050592446 271 dbSNP
rs1344839460 292 dbSNP
rs1462453735 310 dbSNP
rs62494975 320 dbSNP
rs1023743843 324 dbSNP
rs1353916546 332 dbSNP
rs116421517 334 dbSNP
rs1003598716 335 dbSNP
rs1452117366 342 dbSNP
rs569319164 343 dbSNP
rs1481928003 353 dbSNP
rs951420520 353 dbSNP
rs1037939770 356 dbSNP
rs184834948 359 dbSNP
rs188548495 360 dbSNP
rs1352604441 363 dbSNP
rs1330695086 367 dbSNP
rs1046838126 369 dbSNP
rs193153093 370 dbSNP
rs1002547309 371 dbSNP
rs1162346486 374 dbSNP
rs1484586889 377 dbSNP
rs202175559 383 dbSNP
rs1186522591 394 dbSNP
rs1034163723 395 dbSNP
rs958546276 409 dbSNP
rs1011935985 427 dbSNP
rs534104954 433 dbSNP
rs977172249 449 dbSNP
rs1175610792 464 dbSNP
rs924325288 479 dbSNP
rs1159279160 481 dbSNP
rs1420335860 497 dbSNP
rs781481989 498 dbSNP
rs967821716 500 dbSNP
rs555943741 502 dbSNP
rs1209149893 504 dbSNP
rs1054527980 506 dbSNP
rs977451582 507 dbSNP
rs1160708631 511 dbSNP
rs185576736 516 dbSNP
rs560058957 523 dbSNP
rs986192271 524 dbSNP
rs1409172509 525 dbSNP
rs906710180 533 dbSNP
rs1003629796 536 dbSNP
rs1394061197 542 dbSNP
rs1401124181 545 dbSNP
rs1158797444 552 dbSNP
rs910748803 554 dbSNP
rs1409167080 559 dbSNP
rs1157709775 562 dbSNP
rs189172069 569 dbSNP
rs769614331 572 dbSNP
rs777600178 577 dbSNP
rs1277306011 580 dbSNP
rs1262799743 583 dbSNP
rs1005573699 585 dbSNP
rs1038395727 587 dbSNP
rs1484995210 593 dbSNP
rs1375490291 602 dbSNP
rs536990548 604 dbSNP
rs964050988 605 dbSNP
rs975346353 607 dbSNP
rs1318679268 608 dbSNP
rs1383583179 622 dbSNP
rs1029546861 625 dbSNP
rs955202355 631 dbSNP
rs1461504772 639 dbSNP
rs574936364 641 dbSNP
rs371669922 661 dbSNP
rs545785644 663 dbSNP
rs1472719963 664 dbSNP
rs957331810 665 dbSNP
rs1202333659 666 dbSNP
rs1046726643 684 dbSNP
rs1427016408 686 dbSNP
rs180910954 688 dbSNP
rs1214456965 691 dbSNP
rs1440434815 692 dbSNP
rs906852666 694 dbSNP
rs1002599889 702 dbSNP
rs915579547 703 dbSNP
rs989884907 703 dbSNP
rs1355491004 705 dbSNP
rs375893071 736 dbSNP
rs1270599410 742 dbSNP
rs1229298064 748 dbSNP
rs1362671097 753 dbSNP
rs1393519181 754 dbSNP
rs948372072 758 dbSNP
rs1045295423 759 dbSNP
rs1173597260 763 dbSNP
rs928211920 765 dbSNP
rs1405318465 766 dbSNP
rs146009072 776 dbSNP
rs1170069914 781 dbSNP
rs939561275 800 dbSNP
rs1047198977 814 dbSNP
rs1194506119 815 dbSNP
rs887227694 825 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acucuguccAAGUACGACGAua 5'
                   | |: ||||||  
Target 5' uccuccuccUCCGAGCUGCU-- 3'
16 - 35
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000256001.8 | 3UTR | CCUCGCUCUCCCUCCUCCUCCUCCUCCGAGCUGCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
180 hsa-miR-4524a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055251 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT055826 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT060573 CCND1 cyclin D1 2 2
MIRT061013 C1ORF21 chromosome 1 open reading frame 21 2 6
MIRT064694 CCND2 cyclin D2 2 4
MIRT075268 SNTB2 syntrophin beta 2 2 4
MIRT079668 NAPG NSF attachment protein gamma 2 12
MIRT081651 CCNE1 cyclin E1 2 4
MIRT082996 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT083463 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT085755 RIF1 replication timing regulatory factor 1 2 2
MIRT086022 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT087431 ZNRF3 zinc and ring finger 3 2 2
MIRT088786 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT089221 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT093696 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT095090 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT096249 CANX calnexin 2 2
MIRT100215 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT100746 VEGFA vascular endothelial growth factor A 2 12
MIRT100904 CD2AP CD2 associated protein 2 2
MIRT102647 UBN2 ubinuclein 2 2 10
MIRT103882 FOXK1 forkhead box K1 2 2
MIRT104246 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT106310 ZFHX4 zinc finger homeobox 4 2 6
MIRT107696 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT114943 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT117671 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT133799 SKI SKI proto-oncogene 2 2
MIRT140167 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT142279 DCTN5 dynactin subunit 5 2 8
MIRT143288 N4BP1 NEDD4 binding protein 1 2 2
MIRT165939 CREBRF CREB3 regulatory factor 2 2
MIRT175251 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT186381 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT191470 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT196480 TAOK1 TAO kinase 1 2 2
MIRT201470 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT204615 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204646 MOB4 MOB family member 4, phocein 2 8
MIRT204749 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT206031 NUP50 nucleoporin 50 2 6
MIRT211196 FGF2 fibroblast growth factor 2 2 4
MIRT229353 ZNF449 zinc finger protein 449 2 2
MIRT247138 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT249461 ZNF691 zinc finger protein 691 2 4
MIRT256314 CDC42SE2 CDC42 small effector 2 2 2
MIRT258419 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT265083 CHEK1 checkpoint kinase 1 2 2
MIRT270561 SETD1B SET domain containing 1B 2 2
MIRT274749 RAB3IP RAB3A interacting protein 2 2
MIRT277515 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT289642 CBX2 chromobox 2 2 2
MIRT301001 MTMR3 myotubularin related protein 3 2 2
MIRT307149 CTDSPL CTD small phosphatase like 2 4
MIRT309021 USP53 ubiquitin specific peptidase 53 2 2
MIRT314100 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT319338 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT320619 ZNRF2 zinc and ring finger 2 2 2
MIRT324285 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT446498 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT448437 TLL1 tolloid like 1 2 2
MIRT461537 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463162 ZNF367 zinc finger protein 367 2 10
MIRT463493 ZC3H10 zinc finger CCCH-type containing 10 2 2
MIRT465154 TSC22D2 TSC22 domain family member 2 2 2
MIRT466418 TFAP2A transcription factor AP-2 alpha 2 8
MIRT468278 SFT2D2 SFT2 domain containing 2 2 2
MIRT469399 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT471941 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT473688 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT479618 CDC25A cell division cycle 25A 2 2
MIRT482098 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483995 ATAD5 ATPase family, AAA domain containing 5 2 12
MIRT485205 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT498763 C3orf38 chromosome 3 open reading frame 38 2 8
MIRT498961 ORC4 origin recognition complex subunit 4 2 8
MIRT499440 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500080 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500305 ZNF622 zinc finger protein 622 2 8
MIRT500410 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500789 TLK1 tousled like kinase 1 2 6
MIRT500930 SRPR SRP receptor alpha subunit 2 6
MIRT500943 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501068 SMAD7 SMAD family member 7 2 8
MIRT501711 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT502627 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502910 CDCA4 cell division cycle associated 4 2 8
MIRT502935 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504531 ZNF620 zinc finger protein 620 2 6
MIRT505106 YTHDC1 YTH domain containing 1 2 6
MIRT505337 TMEM245 transmembrane protein 245 2 6
MIRT505383 TMEM100 transmembrane protein 100 2 2
MIRT505678 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506157 PLAG1 PLAG1 zinc finger 2 8
MIRT506183 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506475 MYO5A myosin VA 2 6
MIRT506826 KIF23 kinesin family member 23 2 6
MIRT507160 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT507511 DYNLL2 dynein light chain LC8-type 2 2 4
MIRT507845 CCNE2 cyclin E2 2 6
MIRT510403 ZNF507 zinc finger protein 507 2 2
MIRT518078 TRIM35 tripartite motif containing 35 2 2
MIRT518982 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT521045 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521190 SBNO1 strawberry notch homolog 1 2 6
MIRT522088 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT524846 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT527787 TMEM44 transmembrane protein 44 2 4
MIRT537803 EFNB2 ephrin B2 2 4
MIRT540830 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541140 PISD phosphatidylserine decarboxylase 2 2
MIRT541419 CBX4 chromobox 4 2 2
MIRT543517 PRSS21 protease, serine 21 2 2
MIRT543824 GSG1 germ cell associated 1 2 2
MIRT544959 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545179 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545335 CCDC83 coiled-coil domain containing 83 2 2
MIRT545518 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545670 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545931 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546102 USP48 ubiquitin specific peptidase 48 2 4
MIRT546598 SALL1 spalt like transcription factor 1 2 4
MIRT546626 RTN4 reticulon 4 2 2
MIRT547651 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547987 HCFC2 host cell factor C2 2 4
MIRT548717 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548931 CDK17 cyclin dependent kinase 17 2 2
MIRT549067 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549266 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT550460 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550806 FAM229B family with sequence similarity 229 member B 2 2
MIRT552024 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552334 ZNF704 zinc finger protein 704 2 2
MIRT552732 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT553795 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554694 RNF149 ring finger protein 149 2 2
MIRT555133 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555264 PRDM4 PR/SET domain 4 2 2
MIRT556848 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557474 GPR27 G protein-coupled receptor 27 2 4
MIRT558018 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558498 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558579 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558610 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT558650 CNKSR3 CNKSR family member 3 2 2
MIRT558986 CA8 carbonic anhydrase 8 2 2
MIRT559141 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559327 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT562021 LANCL1 LanC like 1 2 2
MIRT562869 KIAA1456 KIAA1456 2 2
MIRT563074 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563496 DLGAP3 DLG associated protein 3 2 2
MIRT563890 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564311 CCNT1 cyclin T1 2 2
MIRT564942 XKR7 XK related 7 2 2
MIRT564979 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT565423 TEF TEF, PAR bZIP transcription factor 2 2
MIRT566824 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571961 KIF5B kinesin family member 5B 2 2
MIRT575877 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT576523 Txlna taxilin alpha 2 2
MIRT614693 TRAK1 trafficking kinesin protein 1 2 2
MIRT616065 ZC3H14 zinc finger CCCH-type containing 14 2 2
MIRT618838 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT624626 ATXN2 ataxin 2 2 2
MIRT624652 ASAH2 N-acylsphingosine amidohydrolase 2 2 2
MIRT640314 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT659248 CUL3 cullin 3 2 2
MIRT680972 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682261 RS1 retinoschisin 1 2 2
MIRT682505 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693904 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT699214 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT699373 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699451 SLC16A9 solute carrier family 16 member 9 2 2
MIRT701230 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702849 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT706163 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT718990 UTP15 UTP15, small subunit processome component 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4524a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4524a-5p Cetuximab resistant tissue (colorectal carcinoma)

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