pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PHF5A   
Synonyms INI, Rds3, SAP14b, SF3B7, SF3b14b, bK223H9.2
Description PHD finger protein 5A
Transcript NM_032758   
Expression
Putative miRNA Targets on PHF5A
3'UTR of PHF5A
(miRNA target sites are highlighted)
>PHF5A|NM_032758|3'UTR
   1 TTGGTGGGTGGCCCCTTCCTCCCCCCAACATCAGTCTGCTGCAGCTGCCAGAAAACATGCCTACTACTACCAGCAGAAAG
  81 GGAGCAGAGCCCAGAGCATCACCAGGAGTGCCTGCTAGTGTACTGGCAGCTTGCCACCCCCTCCTCTCCCTTCACCCAGA
 161 CACGTGGTAGGGATGGAAAAGGATTCTTCACAGAGCACTCTGGCACACCATATCGGAGAAAACTTGATAGATTAGTTAAT
 241 GGTTTTTCTTGAATTCGAGAAGCAAAGATCTGTTCTCCATATTGGTATGTTCTCCCTCAACCAAGATCTTCTAAAAAGAA
 321 ATAATATTTTAGTCTTCTGCTTGAGGAACTGACTGTGAAGCGACGCCCAGTGAAAAACATGTTCTTGCAGCAGCTCTGGT
 401 GGCAGCTGTCCTTGAGGAACCTTTGGTGTGTGGTGGGAAGCTATCAGAACAAGAAATGTAGGCATTTCCCGTTTTTTTTG
 481 GGGGGGGGGTGGGGGGGCAGGGCTCTGCCCTCTTGAAAGGCATTTACTTGTTTAACACTTGTCCAGCTACAGTGGGGTAC
 561 AGTAGCTGGCTATTCACAGGCATCATCATAGCCCACTAGTCTCATATTATTTTCCTTTTGAGAAATTGGAAACTCTTTCT
 641 GTTGCTATTATATTAATAAAGTTGGTGTTTATTTTCTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
 721 A
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaGGU--GACGAUGUUGGAGGGUCu 5'
            :||  |||||:||: || |||| 
Target 5' caTCAGTCTGCTGCAG-CTGCCAGa 3'
29 - 52 138.00 -23.90
2
miRNA  3' aagGUGACGAUGUUGGAGGGucu 5'
             :|:|| ||:: :|||||   
Target 5' ccaTATTGGTATGTTCTCCCtca 3'
277 - 299 124.00 -16.22
3
miRNA  3' aaggUGACGAUGUUG--GAGGGUCu 5'
              |||| |: |:|  | ||||| 
Target 5' actgACTG-TGAAGCGACGCCCAGt 3'
348 - 371 124.00 -18.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN32063182 3 COSMIC
COSN30527245 16 COSMIC
COSN30116169 36 COSMIC
COSN31558272 48 COSMIC
COSN30153129 51 COSMIC
COSN26988860 54 COSMIC
COSN31542630 64 COSMIC
COSN30144642 115 COSMIC
COSN18744257 122 COSMIC
COSN28679702 129 COSMIC
COSN30466202 153 COSMIC
COSN30109281 176 COSMIC
COSN30514511 204 COSMIC
COSN20670209 343 COSMIC
COSN27307998 472 COSMIC
rs5758364 490 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs574375738 5 dbSNP
rs779356066 6 dbSNP
rs757348271 11 dbSNP
rs753836588 12 dbSNP
rs1369794493 14 dbSNP
rs1420842877 15 dbSNP
rs764412268 18 dbSNP
rs764027890 20 dbSNP
rs375345370 21 dbSNP
rs752594319 22 dbSNP
rs201597741 25 dbSNP
rs768434018 27 dbSNP
rs372071367 29 dbSNP
rs1202684012 30 dbSNP
rs964081097 44 dbSNP
rs1302870496 49 dbSNP
rs1456369912 51 dbSNP
rs1016996065 56 dbSNP
rs984064430 64 dbSNP
rs1004588232 67 dbSNP
rs1239779229 71 dbSNP
rs886147322 73 dbSNP
rs1288448646 75 dbSNP
rs951428592 87 dbSNP
rs1048820730 93 dbSNP
rs995048301 94 dbSNP
rs546374204 102 dbSNP
rs577362560 111 dbSNP
rs765844652 112 dbSNP
rs907154307 127 dbSNP
rs1054988789 130 dbSNP
rs1419157772 133 dbSNP
rs1042939 137 dbSNP
rs1383023111 138 dbSNP
rs1042940 141 dbSNP
rs1393056346 143 dbSNP
rs559200755 148 dbSNP
rs1163386293 149 dbSNP
rs1366557846 154 dbSNP
rs927898920 162 dbSNP
rs1296965119 163 dbSNP
rs1373171714 164 dbSNP
rs1012785001 166 dbSNP
rs1046109929 169 dbSNP
rs534456060 182 dbSNP
rs1432884514 186 dbSNP
rs762580395 200 dbSNP
rs894211992 206 dbSNP
rs1323279050 207 dbSNP
rs1377530822 208 dbSNP
rs1042943 209 dbSNP
rs1042944 210 dbSNP
rs370458271 212 dbSNP
rs913285059 214 dbSNP
rs1480887760 218 dbSNP
rs1362406741 221 dbSNP
rs1042947 223 dbSNP
rs149294656 233 dbSNP
rs1257360276 234 dbSNP
rs1386639276 237 dbSNP
rs1186633102 242 dbSNP
rs1042952 256 dbSNP
rs1462918118 257 dbSNP
rs191483313 259 dbSNP
rs202639 265 dbSNP
rs922087941 268 dbSNP
rs974923873 272 dbSNP
rs1259233342 277 dbSNP
rs966260902 279 dbSNP
rs1019164719 281 dbSNP
rs1294530054 284 dbSNP
rs1042958 285 dbSNP
rs4822029 286 dbSNP
rs922873698 287 dbSNP
rs1200428008 290 dbSNP
rs1349763429 294 dbSNP
rs950424899 296 dbSNP
rs765030725 303 dbSNP
rs1027761031 327 dbSNP
rs1203685819 330 dbSNP
rs1474201888 332 dbSNP
rs1185183104 334 dbSNP
rs1258738584 336 dbSNP
rs13766 339 dbSNP
rs975531805 340 dbSNP
rs569192944 343 dbSNP
rs894936274 348 dbSNP
rs1033504926 349 dbSNP
rs557479641 351 dbSNP
rs57259696 351 dbSNP
rs1469366298 355 dbSNP
rs17002469 361 dbSNP
rs186918522 362 dbSNP
rs183695146 364 dbSNP
rs951420876 365 dbSNP
rs906408572 368 dbSNP
rs1281315423 369 dbSNP
rs1025643536 371 dbSNP
rs1223633091 382 dbSNP
rs1280088540 384 dbSNP
rs1444973625 387 dbSNP
rs982556503 388 dbSNP
rs535977723 390 dbSNP
rs1488823372 391 dbSNP
rs192793191 393 dbSNP
rs1267407354 398 dbSNP
rs946009443 401 dbSNP
rs891781644 402 dbSNP
rs1173270163 405 dbSNP
rs1381857898 409 dbSNP
rs1382979588 410 dbSNP
rs1054889689 413 dbSNP
rs936086315 414 dbSNP
rs922055533 419 dbSNP
rs974848757 436 dbSNP
rs1345954894 450 dbSNP
rs1042972 453 dbSNP
rs944893073 456 dbSNP
rs1301023820 458 dbSNP
rs1454586989 468 dbSNP
rs1405463705 471 dbSNP
rs1417815836 471 dbSNP
rs76744137 472 dbSNP
rs1347922908 477 dbSNP
rs1163366305 478 dbSNP
rs1425723937 478 dbSNP
rs1491214661 479 dbSNP
rs9423 479 dbSNP
rs1491254821 480 dbSNP
rs1491265943 480 dbSNP
rs780059894 480 dbSNP
rs865871235 480 dbSNP
rs1364724135 481 dbSNP
rs1491131579 481 dbSNP
rs1419374869 482 dbSNP
rs1199909329 483 dbSNP
rs1187903615 484 dbSNP
rs1243292991 485 dbSNP
rs958535984 485 dbSNP
rs1292672834 486 dbSNP
rs1359166805 486 dbSNP
rs1203964572 487 dbSNP
rs1446074465 487 dbSNP
rs1181976830 488 dbSNP
rs1384773365 488 dbSNP
rs1473012873 489 dbSNP
rs1164727797 490 dbSNP
rs1199738083 490 dbSNP
rs5758364 490 dbSNP
rs1286291602 491 dbSNP
rs1383007435 491 dbSNP
rs1259165568 496 dbSNP
rs1258875995 498 dbSNP
rs1276630459 498 dbSNP
rs751852522 498 dbSNP
rs1340659153 499 dbSNP
rs1371103205 499 dbSNP
rs35777353 503 dbSNP
rs1206699687 504 dbSNP
rs559991943 506 dbSNP
rs1272518794 507 dbSNP
rs1171292560 509 dbSNP
rs1231362827 511 dbSNP
rs999945259 518 dbSNP
rs1337126564 529 dbSNP
rs1335447425 530 dbSNP
rs1402522682 534 dbSNP
rs1397396210 548 dbSNP
rs113800666 551 dbSNP
rs1336622689 553 dbSNP
rs902963427 561 dbSNP
rs1253644564 570 dbSNP
rs1284857178 573 dbSNP
rs1320563713 575 dbSNP
rs769031354 577 dbSNP
rs774216439 585 dbSNP
rs1226706589 588 dbSNP
rs1041368420 590 dbSNP
rs1259479421 590 dbSNP
rs1042993 595 dbSNP
rs998280365 596 dbSNP
rs1394423182 599 dbSNP
rs1324232008 601 dbSNP
rs1265288840 605 dbSNP
rs1463347035 608 dbSNP
rs1175151617 619 dbSNP
rs1419113172 620 dbSNP
rs951055697 634 dbSNP
rs1156453278 639 dbSNP
rs1467325038 639 dbSNP
rs1383727017 641 dbSNP
rs1399807512 647 dbSNP
rs1299140916 650 dbSNP
rs1027319200 652 dbSNP
rs1342976246 656 dbSNP
rs973099143 671 dbSNP
rs1300742505 678 dbSNP
rs1312842237 679 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aaGGUGACGAU---GUUGGAGGGUCu 5'
            :|||||| |   | ||:|||||| 
Target 5' gcUCACUGCAACCUCUACUUCCCAG- 3'
7 - 31
2
miRNA  3' aaggugacgauguuggAGGGUCu 5'
                          ||:||| 
Target 5' ---------------aUCUCAGc 3'
1 - 8
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000216252.3 | 3UTR | AUCUCAGCUCACUGCAACCUCUACUUCCCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
HNSC -0.549 0.32 -0.500 0.33 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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