pre-miRNA Information
pre-miRNA hsa-mir-744   
Genomic Coordinates chr17: 12081899 - 12081996
Synonyms MIRN744, hsa-mir-744, MIR744
Description Homo sapiens miR-744 stem-loop
Comment This sequence was identified as a miRNA candidate by Berezikov et al. using RAKE and MPSS techniques .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-744-5p
Sequence 11| UGCGGGGCUAGGGCUAACAGCA |32
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN23015028 1 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs557969425 1 dbSNP
rs748252260 4 dbSNP
rs1470408501 7 dbSNP
rs1178657616 10 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
B6B8SM miR-744-5p Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Urine Real-time polymerase chain reaction
Gene Information
Gene Symbol VGLL4   
Synonyms VGL-4
Description vestigial like family member 4
Transcript NM_001128219   
Other Transcripts NM_001128220 , NM_001128221 , NM_014667   
Expression
Putative miRNA Targets on VGLL4
3'UTR of VGLL4
(miRNA target sites are highlighted)
>VGLL4|NM_001128219|3'UTR
   1 AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAAAAAAAAAA
  81 TCATGGGGGTGGGGTGGGGGGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTTTTG
 161 TACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGTCTAATGTAGCAT
 241 CCTTACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCACAGCGCTT
 321 TCTCAGTCACAAGCCATGATGAATTGGTGACTCAGACGCTTTGTGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGT
 401 GGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTTGAAGAGAACTGTCGTGTCTGATTTG
 481 CACTATTGGAGGAGGACTAAAGTTGCCTGACAACTTTATGTGTTATGCCAGAACTCTGAGGGCAAACTGCTGAAAAACAA
 561 AGGGTTTAAGGATGACATTTCTGACCATTTGTGTGTTTGTTGTTGTTACTGTTTTTGTTTTTTTTAATGTAGACAATACA
 641 GCTTTGGAAGGGGAAGTCTCATACAGGTTATAGGTCTTTCTCTCTCTAGATTTCAGGTGCTTGCAACTGGACTGCAGACT
 721 CTACCAATCACGGGCATTTTATCTTCTCTGAACACTGCAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCATAGTGC
 801 TTTAAACGTGATGCATGTTTTAATGGAGAAAAAATAGCTGGTTTCTATTAATTATATAGACAGTAAACAAAAACCTTAAT
 881 ACTTACTATCTTCTTTTCAGAATTAGTTTATTTTTGTCAGTTACAGTCCTAGATATACTTACTGCTGGTACAGTTGTACT
 961 CTAAGATTGGTATTTGATATTCACTTTACTCACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCCTCGCGATGAGCAGT
1041 GGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCATCCCTGTCTGCTTTGTTAC
1121 AAGCTCCCAGGGGAGGTGGGGTTTGTGTCTTCCAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGA
1201 ACAGCAGATTACTGACAGACAATCTGTGATATGGTGTTTTATACGCTTCCTCGTACGCTGGGGCCAAGGCAGTATACATT
1281 CCTCTGACTTTATACTGTTATTACTGCATTTATTATTTGCTATATTAATAGCTACTAACTAGAAATTAGATGAAGCAAGC
1361 ATGACAGACACAGCTGTGGAGGTCACAGCTGCTCCTTTTTGGTCAATGAGCGTTTCTATCCCCTCCCCCTGGGGTGTGCT
1441 GTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGCACCTGACCAGGTGACGTGGGCGTGGTCACCTCACCTGCAAGG
1521 CTTTGTGGACTCTGCACACCGTATGACCCCCGGTTTTACAGTTTTTAGCTGTTGAATTTTGGAAATTGGCACTGGGTGAA
1601 AAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGGCCTTTGAAAAGTGGAGGAAAGAAAAGCCCTTCTCCTT
1681 GCCCCGCACACATTTCACTCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAAAAT
1761 CGTTGAGAACACTTTTCTATATGGGTGATTTTGAGACCATCGTTACGCTGTGCGTAAAGAATGTACAGAGAAATTTGTAG
1841 GTATTTTTTGAAGAACATTAATTTGTTAATGATATGTAGCTATTTAATTTTTCCCTTTCCTATTGTAATCATTCATTTTT
1921 TTTGTTGTTCGGAAAAAAAAAGTTGATCTTTTTTTTTGTCGTAGATTTGTCTGTAAAAGTGCAGGAACAGTTATTCTATG
2001 AGAACACTGCATCTGCATTCATAGCCACGAGTTTGTTATTGCTACAGGCTACTGAGCGTCGTAACAGGAAAACCACCCAC
2081 AGCTGACCGGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCGG
2161 CGGTGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGGAGGGGGGCCTGGGGCAGAGGAG
2241 GCAGCAGAAAACCAAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCC
2321 GCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAATATACCATTCTCTGTGGCCTGTTTTTCCT
2401 GGAAGAAGAAAAAAAAAGGTTTGGCAGGCCATCTTTTTTTGTACTTAAAAGTAGCCTTAAGAACAATAATAAAGTGCTCT
2481 TAAACCACAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acgacaaucGGGAUCGGGGCGu 5'
                   :||| ||||||| 
Target 5' aagcccttcTCCTTGCCCCGCa 3'
1667 - 1688 153.00 -24.90
2
miRNA  3' acGACAA--UCGGGAU--CGGGGCgu 5'
            ||| |  || :||:  ||||||  
Target 5' ctCTGATGCAGGTCTGCTGCCCCGac 3'
272 - 297 136.00 -19.70
3
miRNA  3' acGACAAUCGGG-AUCGGGGCGu 5'
            :| ||  |||  |||| ||| 
Target 5' agTTCTT--CCCAGAGCCGCGCt 3'
2305 - 2325 120.00 -17.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30452650 2 COSMIC
COSN30487777 4 COSMIC
COSN24382427 8 COSMIC
COSN20098109 67 COSMIC
COSN15666739 68 COSMIC
COSN20090766 95 COSMIC
COSN20064864 96 COSMIC
COSN19420700 121 COSMIC
COSN21230116 192 COSMIC
COSN30175756 215 COSMIC
COSN24300147 216 COSMIC
COSN31483032 295 COSMIC
COSN23039832 354 COSMIC
COSN26646790 617 COSMIC
COSN31484960 724 COSMIC
COSN31522993 954 COSMIC
COSN31533149 1272 COSMIC
COSN30161853 1292 COSMIC
COSN31549895 1360 COSMIC
COSN20720486 1412 COSMIC
COSN31513127 1500 COSMIC
COSN31562063 1686 COSMIC
COSN31522243 1762 COSMIC
COSN1908442 1820 COSMIC
COSN15725059 1885 COSMIC
COSN1265674 1949 COSMIC
COSN31571562 1956 COSMIC
COSN30176516 1960 COSMIC
COSN31518695 1980 COSMIC
COSN31536878 2037 COSMIC
COSN26649544 2087 COSMIC
COSN31962017 2162 COSMIC
COSN31536432 2164 COSMIC
COSN30542406 2214 COSMIC
COSN6571068 2218 COSMIC
COSN31548999 2363 COSMIC
COSN20703596 2380 COSMIC
COSN31566091 2439 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs199701475 7 dbSNP
rs370862899 8 dbSNP
rs776006826 11 dbSNP
rs1189928849 13 dbSNP
rs200385499 18 dbSNP
rs1432199806 19 dbSNP
rs968206952 21 dbSNP
rs1301228010 22 dbSNP
rs201152887 24 dbSNP
rs757854006 24 dbSNP
rs759990697 25 dbSNP
rs774960701 29 dbSNP
rs1158673106 30 dbSNP
rs1455796620 31 dbSNP
rs771318836 42 dbSNP
rs1388471088 49 dbSNP
rs143606016 50 dbSNP
rs1322637894 56 dbSNP
rs1254669982 57 dbSNP
rs1365818515 58 dbSNP
rs1386444627 61 dbSNP
rs542555092 61 dbSNP
rs955509020 64 dbSNP
rs1483404206 65 dbSNP
rs1254281566 66 dbSNP
rs1203223970 67 dbSNP
rs1267495333 68 dbSNP
rs1329776611 68 dbSNP
rs1341208541 78 dbSNP
rs1030074688 81 dbSNP
rs1268935437 81 dbSNP
rs1270701917 81 dbSNP
rs1361051526 81 dbSNP
rs1435290029 81 dbSNP
rs369629845 81 dbSNP
rs561287742 81 dbSNP
rs900382937 81 dbSNP
rs996892023 81 dbSNP
rs1348239054 82 dbSNP
rs1292142680 83 dbSNP
rs979292945 84 dbSNP
rs1393133065 85 dbSNP
rs575356624 86 dbSNP
rs879602170 90 dbSNP
rs1223888072 94 dbSNP
rs879786287 95 dbSNP
rs1038953549 96 dbSNP
rs1320592705 99 dbSNP
rs1006034461 100 dbSNP
rs1305817294 100 dbSNP
rs1408770043 105 dbSNP
rs1365806544 106 dbSNP
rs1294545954 109 dbSNP
rs1266898647 113 dbSNP
rs1479451525 113 dbSNP
rs1459750606 114 dbSNP
rs1367275695 119 dbSNP
rs1164641251 120 dbSNP
rs1472971482 126 dbSNP
rs35743963 130 dbSNP
rs887622060 130 dbSNP
rs1180291151 132 dbSNP
rs553095730 147 dbSNP
rs1412190140 152 dbSNP
rs1261149607 153 dbSNP
rs1423381340 154 dbSNP
rs929019418 158 dbSNP
rs1000494146 160 dbSNP
rs1428045483 166 dbSNP
rs1056502750 167 dbSNP
rs1370969329 173 dbSNP
rs937697472 176 dbSNP
rs1301024325 177 dbSNP
rs1378327428 177 dbSNP
rs556880251 197 dbSNP
rs1027970078 204 dbSNP
rs1339694769 207 dbSNP
rs188306508 214 dbSNP
rs539097787 215 dbSNP
rs571668361 216 dbSNP
rs1036706543 221 dbSNP
rs1241088646 223 dbSNP
rs1483193356 231 dbSNP
rs1182573452 232 dbSNP
rs1416074511 233 dbSNP
rs553540722 234 dbSNP
rs955635455 246 dbSNP
rs1390954858 251 dbSNP
rs1431459287 253 dbSNP
rs1173688687 254 dbSNP
rs1358545689 262 dbSNP
rs1448642572 265 dbSNP
rs779048426 271 dbSNP
rs1302917500 272 dbSNP
rs1388918734 276 dbSNP
rs1029754778 280 dbSNP
rs1049215370 281 dbSNP
rs1297955877 285 dbSNP
rs370926057 287 dbSNP
rs1216733269 290 dbSNP
rs1276923602 292 dbSNP
rs1311930808 294 dbSNP
rs36111966 295 dbSNP
rs930913125 295 dbSNP
rs7355828 297 dbSNP
rs1044448586 298 dbSNP
rs949995292 304 dbSNP
rs917343053 309 dbSNP
rs1451523757 313 dbSNP
rs1391460051 316 dbSNP
rs567702089 317 dbSNP
rs1006127787 319 dbSNP
rs1472291557 324 dbSNP
rs753687381 331 dbSNP
rs887715417 332 dbSNP
rs1047590239 336 dbSNP
rs1433883080 338 dbSNP
rs1431245743 347 dbSNP
rs925808876 357 dbSNP
rs978600896 358 dbSNP
rs1209116838 359 dbSNP
rs549655894 365 dbSNP
rs1266143991 372 dbSNP
rs766028848 380 dbSNP
rs879550655 385 dbSNP
rs531231109 389 dbSNP
rs570616053 390 dbSNP
rs757520878 392 dbSNP
rs1197030362 394 dbSNP
rs551697256 395 dbSNP
rs1478267647 403 dbSNP
rs751691686 412 dbSNP
rs1004397059 414 dbSNP
rs888183731 415 dbSNP
rs185535419 417 dbSNP
rs1390249394 418 dbSNP
rs914190150 425 dbSNP
rs558544680 426 dbSNP
rs1049732053 428 dbSNP
rs995006372 429 dbSNP
rs955569687 430 dbSNP
rs1349234279 434 dbSNP
rs1228341904 436 dbSNP
rs1289481840 442 dbSNP
rs558479644 443 dbSNP
rs7614588 444 dbSNP
rs1289519079 446 dbSNP
rs1452375273 450 dbSNP
rs1803492 455 dbSNP
rs950052533 458 dbSNP
rs1249381714 461 dbSNP
rs1174541587 464 dbSNP
rs1182812612 464 dbSNP
rs1365405539 465 dbSNP
rs964504144 466 dbSNP
rs1016925758 468 dbSNP
rs984158526 469 dbSNP
rs1406717717 471 dbSNP
rs951932126 478 dbSNP
rs917227287 482 dbSNP
rs1409534542 485 dbSNP
rs866250546 486 dbSNP
rs1338043717 491 dbSNP
rs1377275788 493 dbSNP
rs1026241112 495 dbSNP
rs1248478446 497 dbSNP
rs772261668 497 dbSNP
rs934766311 499 dbSNP
rs1272661253 503 dbSNP
rs143719167 507 dbSNP
rs1346347954 511 dbSNP
rs896335258 514 dbSNP
rs760342121 515 dbSNP
rs1186290837 517 dbSNP
rs1246152262 517 dbSNP
rs1445879747 518 dbSNP
rs979037338 518 dbSNP
rs1187795173 520 dbSNP
rs1429589014 521 dbSNP
rs1001943423 522 dbSNP
rs1442506417 523 dbSNP
rs537504419 526 dbSNP
rs1394822456 528 dbSNP
rs532658655 543 dbSNP
rs921183390 544 dbSNP
rs1341143025 548 dbSNP
rs1454598201 549 dbSNP
rs1198223358 550 dbSNP
rs1341721594 551 dbSNP
rs1228923768 552 dbSNP
rs1252832906 553 dbSNP
rs1342554259 554 dbSNP
rs182313607 556 dbSNP
rs1462312474 562 dbSNP
rs542467251 562 dbSNP
rs774975203 562 dbSNP
rs1043365380 563 dbSNP
rs1015236599 565 dbSNP
rs1344701320 578 dbSNP
rs946393395 588 dbSNP
rs1296064847 589 dbSNP
rs1430561687 591 dbSNP
rs1407463326 595 dbSNP
rs892680444 596 dbSNP
rs1364799141 597 dbSNP
rs147906293 597 dbSNP
rs376282056 597 dbSNP
rs1297948157 599 dbSNP
rs190216412 599 dbSNP
rs1232186698 600 dbSNP
rs1329141194 600 dbSNP
rs1256586275 602 dbSNP
rs1325553429 602 dbSNP
rs952602460 603 dbSNP
rs1384685138 608 dbSNP
rs1464921654 608 dbSNP
rs1401821546 611 dbSNP
rs748498181 614 dbSNP
rs1026698909 617 dbSNP
rs369417745 617 dbSNP
rs532493658 617 dbSNP
rs1431420608 621 dbSNP
rs1388025006 623 dbSNP
rs774897542 626 dbSNP
rs1157527078 630 dbSNP
rs769101043 637 dbSNP
rs942795354 646 dbSNP
rs1290868535 651 dbSNP
rs149366792 652 dbSNP
rs906010113 662 dbSNP
rs1386045641 664 dbSNP
rs1283658219 674 dbSNP
rs1347106230 678 dbSNP
rs147674636 688 dbSNP
rs371418568 688 dbSNP
rs527873758 688 dbSNP
rs531867006 688 dbSNP
rs1329246661 689 dbSNP
rs1056994 694 dbSNP
rs1044684127 706 dbSNP
rs1487939075 711 dbSNP
rs780051389 715 dbSNP
rs1209673881 716 dbSNP
rs1270083092 717 dbSNP
rs951380828 720 dbSNP
rs750304307 723 dbSNP
rs1184842586 724 dbSNP
rs1419807917 728 dbSNP
rs1161340203 729 dbSNP
rs1441303004 731 dbSNP
rs971994379 732 dbSNP
rs1014545448 746 dbSNP
rs544863289 750 dbSNP
rs1053569041 753 dbSNP
rs904918160 754 dbSNP
rs1307400840 762 dbSNP
rs1484244437 763 dbSNP
rs576886185 767 dbSNP
rs1225012507 773 dbSNP
rs1376454240 780 dbSNP
rs1214337112 781 dbSNP
rs1022003499 782 dbSNP
rs1245108337 785 dbSNP
rs1010504211 786 dbSNP
rs1803491 788 dbSNP
rs1362058281 793 dbSNP
rs1357740139 794 dbSNP
rs892145451 794 dbSNP
rs1286440532 799 dbSNP
rs879244123 808 dbSNP
rs1481233253 813 dbSNP
rs756208951 814 dbSNP
rs1179410704 815 dbSNP
rs759981054 817 dbSNP
rs185271223 823 dbSNP
rs1354851602 825 dbSNP
rs553493518 826 dbSNP
rs1164465251 829 dbSNP
rs1052558967 835 dbSNP
rs777079574 840 dbSNP
rs1411824367 841 dbSNP
rs1167698699 849 dbSNP
rs934671416 850 dbSNP
rs117140049 852 dbSNP
rs904614359 854 dbSNP
rs1355096463 855 dbSNP
rs879586113 855 dbSNP
rs1300972577 857 dbSNP
rs771163414 858 dbSNP
rs1377815684 864 dbSNP
rs1452657464 865 dbSNP
rs1316785630 868 dbSNP
rs1362577689 873 dbSNP
rs1226709482 882 dbSNP
rs116096788 886 dbSNP
rs1308405199 887 dbSNP
rs1254709663 888 dbSNP
rs901460048 888 dbSNP
rs1482998602 889 dbSNP
rs1039863789 891 dbSNP
rs756937582 892 dbSNP
rs374501135 894 dbSNP
rs1415925031 899 dbSNP
rs1161349250 901 dbSNP
rs942868104 905 dbSNP
rs1480459596 907 dbSNP
rs1016481861 910 dbSNP
rs984220833 910 dbSNP
rs1173888264 914 dbSNP
rs764039424 916 dbSNP
rs1469929539 919 dbSNP
rs921124625 921 dbSNP
rs537715092 931 dbSNP
rs1362336564 932 dbSNP
rs943996188 934 dbSNP
rs908457065 936 dbSNP
rs982862231 956 dbSNP
rs952371415 957 dbSNP
rs1216674435 965 dbSNP
rs370458878 965 dbSNP
rs993278182 970 dbSNP
rs1204447023 977 dbSNP
rs1183710532 979 dbSNP
rs570236737 980 dbSNP
rs1250589922 987 dbSNP
rs1204319373 989 dbSNP
rs980520234 993 dbSNP
rs960649920 995 dbSNP
rs1189244810 996 dbSNP
rs969116449 1002 dbSNP
rs552077876 1003 dbSNP
rs1452513690 1009 dbSNP
rs1292672990 1013 dbSNP
rs1385809890 1013 dbSNP
rs1014430860 1015 dbSNP
rs1318626740 1025 dbSNP
rs753012156 1027 dbSNP
rs539640103 1028 dbSNP
rs969211884 1029 dbSNP
rs1031890487 1031 dbSNP
rs1289135033 1034 dbSNP
rs1327182098 1041 dbSNP
rs1021971307 1047 dbSNP
rs999265016 1051 dbSNP
rs1230282983 1052 dbSNP
rs1348916344 1053 dbSNP
rs1803490 1055 dbSNP
rs904499587 1058 dbSNP
rs1490432751 1061 dbSNP
rs1279155573 1068 dbSNP
rs1043437185 1072 dbSNP
rs771832992 1074 dbSNP
rs1436968270 1081 dbSNP
rs1351353054 1089 dbSNP
rs1321515114 1096 dbSNP
rs1158604687 1097 dbSNP
rs565975247 1100 dbSNP
rs879745143 1103 dbSNP
rs1322426598 1106 dbSNP
rs998291843 1107 dbSNP
rs1160808876 1109 dbSNP
rs747723557 1111 dbSNP
rs1305552626 1112 dbSNP
rs1471309499 1113 dbSNP
rs1040890204 1116 dbSNP
rs1441619336 1116 dbSNP
rs546249318 1120 dbSNP
rs778496831 1122 dbSNP
rs1280188665 1124 dbSNP
rs982694820 1126 dbSNP
rs528177011 1129 dbSNP
rs1226826936 1130 dbSNP
rs1291236243 1139 dbSNP
rs1487793861 1143 dbSNP
rs1224434025 1144 dbSNP
rs1249575468 1149 dbSNP
rs1437136689 1151 dbSNP
rs1191368297 1163 dbSNP
rs1040361311 1164 dbSNP
rs547038533 1169 dbSNP
rs919633744 1173 dbSNP
rs1162556501 1178 dbSNP
rs980828405 1191 dbSNP
rs1385459713 1194 dbSNP
rs1425763325 1198 dbSNP
rs560519583 1212 dbSNP
rs1007036329 1217 dbSNP
rs969168695 1218 dbSNP
rs1330062433 1220 dbSNP
rs16340 1222 dbSNP
rs397831750 1222 dbSNP
rs930043974 1223 dbSNP
rs1314706496 1228 dbSNP
rs1210714406 1229 dbSNP
rs1247959862 1232 dbSNP
rs1024722664 1233 dbSNP
rs548587861 1244 dbSNP
rs960156803 1245 dbSNP
rs1440259647 1246 dbSNP
rs530564976 1252 dbSNP
rs1032358655 1253 dbSNP
rs563415421 1256 dbSNP
rs138724586 1257 dbSNP
rs927879678 1266 dbSNP
rs1021666387 1267 dbSNP
rs1169056160 1269 dbSNP
rs1399252767 1273 dbSNP
rs981109190 1274 dbSNP
rs1336132444 1278 dbSNP
rs1439864996 1279 dbSNP
rs1454807552 1281 dbSNP
rs1295595973 1282 dbSNP
rs534982826 1288 dbSNP
rs754977474 1291 dbSNP
rs1227876220 1292 dbSNP
rs996794401 1292 dbSNP
rs899934436 1297 dbSNP
rs771470628 1300 dbSNP
rs1202542855 1301 dbSNP
rs1263246607 1302 dbSNP
rs563592832 1306 dbSNP
rs1041067455 1307 dbSNP
rs989312424 1309 dbSNP
rs1260593576 1310 dbSNP
rs1428362199 1313 dbSNP
rs543804662 1315 dbSNP
rs1375332783 1321 dbSNP
rs1322418962 1324 dbSNP
rs956446696 1331 dbSNP
rs1031174985 1332 dbSNP
rs886915647 1336 dbSNP
rs997819932 1347 dbSNP
rs1047324913 1350 dbSNP
rs1384526110 1352 dbSNP
rs1017970549 1355 dbSNP
rs1320019623 1359 dbSNP
rs1455211722 1361 dbSNP
rs1329091252 1362 dbSNP
rs773548637 1362 dbSNP
rs1283782158 1364 dbSNP
rs1226035550 1367 dbSNP
rs1325138285 1367 dbSNP
rs1007131179 1369 dbSNP
rs1176336152 1373 dbSNP
rs749130482 1381 dbSNP
rs1206473074 1383 dbSNP
rs1415882419 1384 dbSNP
rs559590203 1389 dbSNP
rs1489941892 1390 dbSNP
rs879162554 1396 dbSNP
rs1199348745 1397 dbSNP
rs779929617 1401 dbSNP
rs1375737633 1402 dbSNP
rs1454083588 1410 dbSNP
rs1249222847 1411 dbSNP
rs931271397 1412 dbSNP
rs888741669 1416 dbSNP
rs541506267 1418 dbSNP
rs1463610561 1420 dbSNP
rs1363499732 1421 dbSNP
rs1404093470 1422 dbSNP
rs1241667226 1427 dbSNP
rs114200578 1429 dbSNP
rs376053228 1435 dbSNP
rs1044788793 1439 dbSNP
rs1314215278 1440 dbSNP
rs994346642 1441 dbSNP
rs947669222 1447 dbSNP
rs917676632 1454 dbSNP
rs1240747568 1455 dbSNP
rs1263259208 1459 dbSNP
rs938667201 1460 dbSNP
rs750219985 1469 dbSNP
rs764367995 1470 dbSNP
rs924827471 1472 dbSNP
rs555930754 1473 dbSNP
rs1419681967 1479 dbSNP
rs1006386378 1484 dbSNP
rs969030947 1485 dbSNP
rs1449549102 1486 dbSNP
rs1357104917 1487 dbSNP
rs1367150029 1492 dbSNP
rs537027805 1493 dbSNP
rs758549640 1494 dbSNP
rs1392616401 1495 dbSNP
rs1312552725 1498 dbSNP
rs923688488 1499 dbSNP
rs1171038861 1500 dbSNP
rs963987058 1501 dbSNP
rs576427998 1503 dbSNP
rs867309922 1504 dbSNP
rs976897031 1506 dbSNP
rs1203044477 1514 dbSNP
rs1008298210 1516 dbSNP
rs887175063 1523 dbSNP
rs1481038194 1525 dbSNP
rs549631900 1533 dbSNP
rs566109655 1534 dbSNP
rs781434902 1535 dbSNP
rs752789024 1537 dbSNP
rs985160083 1538 dbSNP
rs373367113 1539 dbSNP
rs150193137 1540 dbSNP
rs1027243748 1541 dbSNP
rs1334098571 1547 dbSNP
rs548069346 1548 dbSNP
rs375326913 1551 dbSNP
rs1213172841 1552 dbSNP
rs917560143 1552 dbSNP
rs1483264797 1561 dbSNP
rs551520797 1566 dbSNP
rs1276590596 1571 dbSNP
rs1035891158 1574 dbSNP
rs1225883527 1575 dbSNP
rs1261369701 1587 dbSNP
rs1204555938 1588 dbSNP
rs1460872421 1588 dbSNP
rs1245183904 1593 dbSNP
rs1056123849 1594 dbSNP
rs1003350761 1606 dbSNP
rs191606941 1607 dbSNP
rs1313302372 1612 dbSNP
rs1229567531 1614 dbSNP
rs935134688 1620 dbSNP
rs923677719 1622 dbSNP
rs1376284159 1623 dbSNP
rs1311908151 1627 dbSNP
rs1338370903 1630 dbSNP
rs1343039922 1631 dbSNP
rs893684508 1632 dbSNP
rs1288678742 1634 dbSNP
rs1372010256 1636 dbSNP
rs1221006441 1640 dbSNP
rs867275810 1642 dbSNP
rs1322991803 1647 dbSNP
rs1224202188 1650 dbSNP
rs1310293997 1651 dbSNP
rs9881151 1652 dbSNP
rs923753282 1656 dbSNP
rs976654251 1657 dbSNP
rs1242519746 1658 dbSNP
rs1486686118 1669 dbSNP
rs943778789 1674 dbSNP
rs1354501760 1680 dbSNP
rs746633249 1682 dbSNP
rs914842655 1682 dbSNP
rs534383588 1685 dbSNP
rs964248644 1686 dbSNP
rs532083410 1687 dbSNP
rs1019599629 1689 dbSNP
rs1402223845 1693 dbSNP
rs766890693 1695 dbSNP
rs985086735 1696 dbSNP
rs1345404360 1697 dbSNP
rs1187308397 1698 dbSNP
rs567008333 1700 dbSNP
rs1276716491 1702 dbSNP
rs796313318 1705 dbSNP
rs1348585231 1706 dbSNP
rs1223433995 1713 dbSNP
rs1254215270 1714 dbSNP
rs1193894106 1721 dbSNP
rs1480162249 1725 dbSNP
rs73812470 1726 dbSNP
rs1219973409 1737 dbSNP
rs1291008257 1738 dbSNP
rs1490499430 1739 dbSNP
rs1027211094 1741 dbSNP
rs995354913 1742 dbSNP
rs972967081 1745 dbSNP
rs1230678586 1748 dbSNP
rs767514099 1749 dbSNP
rs1177481811 1750 dbSNP
rs760998324 1755 dbSNP
rs898300582 1757 dbSNP
rs867640067 1761 dbSNP
rs530422684 1762 dbSNP
rs752495534 1763 dbSNP
rs1365292233 1768 dbSNP
rs1425884947 1770 dbSNP
rs1326034502 1773 dbSNP
rs1012200902 1779 dbSNP
rs1334072117 1784 dbSNP
rs896401460 1790 dbSNP
rs1292207412 1792 dbSNP
rs145976533 1793 dbSNP
rs1379367319 1800 dbSNP
rs905907855 1800 dbSNP
rs1243988819 1802 dbSNP
rs1314148686 1806 dbSNP
rs754690019 1807 dbSNP
rs1351992827 1813 dbSNP
rs1286029506 1814 dbSNP
rs1270777617 1822 dbSNP
rs1390055306 1823 dbSNP
rs934957481 1825 dbSNP
rs1239675893 1830 dbSNP
rs1442421839 1834 dbSNP
rs1182556234 1835 dbSNP
rs902262887 1839 dbSNP
rs1396159655 1843 dbSNP
rs765220541 1850 dbSNP
rs1473299830 1852 dbSNP
rs1165571719 1853 dbSNP
rs1394966619 1854 dbSNP
rs1043841002 1856 dbSNP
rs1329645724 1862 dbSNP
rs773617930 1863 dbSNP
rs1459960816 1872 dbSNP
rs1402495324 1874 dbSNP
rs1450724340 1874 dbSNP
rs1314560954 1875 dbSNP
rs1383330198 1876 dbSNP
rs1246711389 1877 dbSNP
rs1268382967 1877 dbSNP
rs914769012 1879 dbSNP
rs1392897377 1883 dbSNP
rs975536564 1889 dbSNP
rs747297831 1893 dbSNP
rs1164361257 1895 dbSNP
rs1457803180 1898 dbSNP
rs1414500912 1900 dbSNP
rs1179860458 1901 dbSNP
rs1418296931 1904 dbSNP
rs1267704182 1906 dbSNP
rs771853057 1911 dbSNP
rs1011506520 1912 dbSNP
rs1467121588 1913 dbSNP
rs771433120 1916 dbSNP
rs563302500 1917 dbSNP
rs565437662 1918 dbSNP
rs1171921087 1924 dbSNP
rs397966587 1924 dbSNP
rs61586366 1924 dbSNP
rs1425885858 1927 dbSNP
rs1237804709 1929 dbSNP
rs1468287039 1930 dbSNP
rs551337320 1930 dbSNP
rs1315989439 1931 dbSNP
rs999849234 1931 dbSNP
rs1302484957 1932 dbSNP
rs1431396604 1933 dbSNP
rs1279953508 1935 dbSNP
rs1388861726 1941 dbSNP
rs1320875536 1942 dbSNP
rs201810263 1942 dbSNP
rs1263419765 1945 dbSNP
rs1369477965 1946 dbSNP
rs1202956959 1949 dbSNP
rs542508272 1951 dbSNP
rs1446721479 1957 dbSNP
rs1265968480 1958 dbSNP
rs879799623 1958 dbSNP
rs902464181 1958 dbSNP
rs1175770842 1959 dbSNP
rs1378227190 1960 dbSNP
rs533275707 1960 dbSNP
rs114755647 1961 dbSNP
rs1383989417 1964 dbSNP
rs1400372539 1965 dbSNP
rs1300035185 1969 dbSNP
rs541211040 1971 dbSNP
rs1403854747 1972 dbSNP
rs1283400987 1979 dbSNP
rs1157051516 1985 dbSNP
rs1332250807 1988 dbSNP
rs1025746493 1994 dbSNP
rs1049518774 1994 dbSNP
rs1217766266 2000 dbSNP
rs1288840783 2001 dbSNP
rs1490008883 2018 dbSNP
rs974536157 2021 dbSNP
rs1268154475 2025 dbSNP
rs60599857 2029 dbSNP
rs1452301130 2039 dbSNP
rs186875727 2046 dbSNP
rs1180001310 2047 dbSNP
rs1363438883 2047 dbSNP
rs1023512538 2048 dbSNP
rs919572869 2050 dbSNP
rs1012078277 2055 dbSNP
rs972464462 2057 dbSNP
rs543935024 2058 dbSNP
rs576319889 2060 dbSNP
rs1034894969 2061 dbSNP
rs1389170189 2065 dbSNP
rs1465868505 2068 dbSNP
rs999216531 2085 dbSNP
rs902145629 2088 dbSNP
rs774018935 2089 dbSNP
rs563060970 2093 dbSNP
rs970216642 2094 dbSNP
rs1022974658 2098 dbSNP
rs1011601525 2099 dbSNP
rs1440575760 2106 dbSNP
rs900260177 2107 dbSNP
rs1346105964 2108 dbSNP
rs1031626214 2109 dbSNP
rs1303328743 2110 dbSNP
rs1443764038 2114 dbSNP
rs998876803 2118 dbSNP
rs1039884588 2121 dbSNP
rs1351515851 2123 dbSNP
rs1460068845 2124 dbSNP
rs1367970034 2125 dbSNP
rs778659371 2125 dbSNP
rs942840030 2127 dbSNP
rs1448540076 2130 dbSNP
rs912820767 2130 dbSNP
rs1334222949 2133 dbSNP
rs558137092 2140 dbSNP
rs1228104551 2142 dbSNP
rs1324009792 2150 dbSNP
rs1381687861 2152 dbSNP
rs766686673 2155 dbSNP
rs878870478 2156 dbSNP
rs546152688 2159 dbSNP
rs1008450019 2161 dbSNP
rs146630392 2162 dbSNP
rs1200817750 2165 dbSNP
rs918612823 2168 dbSNP
rs1394183335 2170 dbSNP
rs1049611619 2171 dbSNP
rs931047138 2173 dbSNP
rs554081826 2174 dbSNP
rs574492643 2175 dbSNP
rs779905433 2177 dbSNP
rs1451321655 2196 dbSNP
rs1037071293 2198 dbSNP
rs1023689604 2200 dbSNP
rs1466719675 2201 dbSNP
rs1173896081 2203 dbSNP
rs1371248449 2205 dbSNP
rs769766046 2213 dbSNP
rs960504684 2217 dbSNP
rs1191893842 2221 dbSNP
rs1381034465 2224 dbSNP
rs939703660 2225 dbSNP
rs1220509094 2226 dbSNP
rs1318773092 2226 dbSNP
rs1261553967 2233 dbSNP
rs1311849890 2237 dbSNP
rs1211034980 2238 dbSNP
rs1034954633 2241 dbSNP
rs1442450689 2255 dbSNP
rs1238991987 2259 dbSNP
rs1484738457 2259 dbSNP
rs928855332 2259 dbSNP
rs375948441 2262 dbSNP
rs1263809834 2264 dbSNP
rs1478539793 2273 dbSNP
rs1427935008 2276 dbSNP
rs966632827 2281 dbSNP
rs1208205778 2285 dbSNP
rs1022421065 2290 dbSNP
rs1010565479 2291 dbSNP
rs981728636 2292 dbSNP
rs970311482 2300 dbSNP
rs1280149295 2304 dbSNP
rs745655467 2319 dbSNP
rs541552078 2320 dbSNP
rs1038722907 2321 dbSNP
rs373233928 2323 dbSNP
rs1280984830 2326 dbSNP
rs1341083044 2326 dbSNP
rs957421026 2329 dbSNP
rs568364610 2336 dbSNP
rs999239031 2337 dbSNP
rs1413242758 2338 dbSNP
rs1197143748 2339 dbSNP
rs966085664 2346 dbSNP
rs1375062716 2350 dbSNP
rs758644300 2354 dbSNP
rs1405302011 2355 dbSNP
rs1431364837 2367 dbSNP
rs752878909 2370 dbSNP
rs1394283753 2372 dbSNP
rs555162193 2373 dbSNP
rs779079754 2374 dbSNP
rs765935220 2375 dbSNP
rs941303203 2376 dbSNP
rs916684813 2377 dbSNP
rs990871824 2378 dbSNP
rs960765375 2383 dbSNP
rs1422063408 2385 dbSNP
rs1369622560 2402 dbSNP
rs1185151753 2405 dbSNP
rs1349431240 2408 dbSNP
rs537152211 2408 dbSNP
rs560633866 2409 dbSNP
rs927809908 2409 dbSNP
rs1371428180 2410 dbSNP
rs1206356332 2411 dbSNP
rs1239639056 2411 dbSNP
rs1309757881 2411 dbSNP
rs1220183740 2418 dbSNP
rs898208470 2418 dbSNP
rs995346277 2418 dbSNP
rs977947325 2426 dbSNP
rs1036799104 2434 dbSNP
rs1223093934 2437 dbSNP
rs1271524445 2439 dbSNP
rs1230623977 2441 dbSNP
rs939651062 2441 dbSNP
rs1195665521 2443 dbSNP
rs369442149 2444 dbSNP
rs906853658 2448 dbSNP
rs1162296895 2449 dbSNP
rs1295263813 2451 dbSNP
rs1413665568 2459 dbSNP
rs1045829962 2464 dbSNP
rs1325639473 2467 dbSNP
rs1231509217 2470 dbSNP
rs1352802354 2470 dbSNP
rs1332232068 2471 dbSNP
rs1446331240 2471 dbSNP
rs574090098 2473 dbSNP
rs756026461 2474 dbSNP
rs1283572676 2476 dbSNP
rs967064715 2478 dbSNP
rs1289172745 2479 dbSNP
rs569519872 2485 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 9686.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acgacaaucgggAUCGGGGCGu 5'
                      | ||||||| 
Target 5' ------------UUGCCCCGCa 3'
1 - 10
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acgacaaucgggaucgGGGCGu 5'
                          ||||| 
Target 5' ----------------CCCGCa 3'
1 - 6
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000273038.3 | 3UTR | UUGCCCCGCACACAUUUCACUCCCACUGUACUGGGCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000273038.3 | 3UTR | CCCGCACACAUUUCACUCCCACUGUACUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE42095 Differentiated embryonic stem cells 0.475 1.1e-2 0.405 2.8e-2 23 Click to see details
GSE26953 Aortic valvular endothelial cells -0.465 1.1e-2 -0.535 3.5e-3 24 Click to see details
GSE28544 Breast cancer 0.454 1.3e-2 0.508 5.6e-3 24 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.412 2.0e-2 0.279 8.8e-2 25 Click to see details
GSE17498 Multiple myeloma -0.21 9.7e-2 -0.192 1.2e-1 40 Click to see details
GSE38226 Liver fibrosis -0.294 9.8e-2 -0.254 1.3e-1 21 Click to see details
GSE19350 CNS germ cell tumors 0.365 1.2e-1 0.287 1.8e-1 12 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.412 1.4e-1 0.167 3.3e-1 9 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.214 1.5e-1 -0.237 1.3e-1 25 Click to see details
GSE21032 Prostate cancer -0.096 1.9e-1 -0.101 1.8e-1 83 Click to see details
GSE19783 ER+ ER+ breast cancer -0.176 2.3e-1 -0.241 1.5e-1 20 Click to see details
GSE32688 Pancreatic cancer 0.122 2.5e-1 0.121 2.5e-1 32 Click to see details
GSE19783 ER- ER- breast cancer -0.063 2.9e-1 -0.111 1.7e-1 79 Click to see details
GSE19536 Breast cancer -0.031 3.8e-1 -0.032 3.8e-1 100 Click to see details
GSE21687 Ependynoma primary tumors -0.036 3.9e-1 0.046 3.6e-1 64 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.038 4.4e-1 -0.229 1.7e-1 20 Click to see details
GSE28260 Renal cortex and medulla -0.024 4.7e-1 -0.011 4.9e-1 13 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
PRAD -0.358 0.01 -0.339 0.01 50 Click to see details
BLCA 0.373 0.06 0.391 0.05 18 Click to see details
LUSC -0.224 0.09 -0.241 0.07 38 Click to see details
KIRP 0.225 0.11 0.216 0.12 32 Click to see details
CHOL -0.441 0.12 -0.450 0.11 9 Click to see details
LUAD -0.334 0.14 -0.371 0.12 12 Click to see details
BRCA 0.109 0.16 0.072 0.26 84 Click to see details
CESC 0.824 0.19 0.500 0.33 3 Click to see details
PCPG 0.821 0.19 1.000 0.5 3 Click to see details
UCEC -0.19 0.22 -0.081 0.37 19 Click to see details
KIRC -0.087 0.24 -0.099 0.21 68 Click to see details
ESCA 0.202 0.28 0.073 0.42 11 Click to see details
THCA 0.072 0.29 0.150 0.13 59 Click to see details
KICH -0.104 0.31 -0.072 0.37 25 Click to see details
STAD -0.047 0.4 0.023 0.45 32 Click to see details
LIHC -0.027 0.43 -0.001 0.5 49 Click to see details
HNSC 0.017 0.46 0.028 0.43 42 Click to see details
COAD 0.039 0.46 0.000 0.5 8 Click to see details
PAAD -0.071 0.46 0.400 0.3 4 Click to see details
PAAD -0.071 0.46 0.400 0.3 4 Click to see details
PAAD -0.071 0.46 0.400 0.3 4 Click to see details
412 hsa-miR-744-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT016085 ARL15 ADP ribosylation factor like GTPase 15 1 1
MIRT016086 AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 1 2
MIRT016087 PPTC7 PTC7 protein phosphatase homolog 2 3
MIRT016088 RASSF1 Ras association domain family member 1 1 1
MIRT016089 IER5 immediate early response 5 1 1
MIRT037383 UFC1 ubiquitin-fold modifier conjugating enzyme 1 1 1
MIRT037384 STAM2 signal transducing adaptor molecule 2 1 1
MIRT037385 SRRM2 serine/arginine repetitive matrix 2 1 1
MIRT037386 DCXR dicarbonyl and L-xylulose reductase 1 1
MIRT037387 TSPAN17 tetraspanin 17 1 1
MIRT037388 ACTB actin beta 1 1
MIRT037389 HIST1H2BC histone cluster 1 H2B family member c 1 1
MIRT037390 ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 1 1
MIRT037391 VDAC1 voltage dependent anion channel 1 1 1
MIRT037392 RNASEK ribonuclease K 1 1
MIRT037393 CDK16 cyclin dependent kinase 16 1 1
MIRT037394 ZCCHC24 zinc finger CCHC-type containing 24 1 1
MIRT037395 ARRDC2 arrestin domain containing 2 1 1
MIRT037396 SGMS1 sphingomyelin synthase 1 1 1
MIRT037397 HSPD1 heat shock protein family D (Hsp60) member 1 1 1
MIRT037398 MRPL46 mitochondrial ribosomal protein L46 1 1
MIRT037399 RHEB Ras homolog, mTORC1 binding 1 1
MIRT037400 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT037401 TP53I13 tumor protein p53 inducible protein 13 1 1
MIRT037402 CD44 CD44 molecule (Indian blood group) 1 1
MIRT037403 USP12 ubiquitin specific peptidase 12 1 1
MIRT037404 AP2B1 adaptor related protein complex 2 beta 1 subunit 1 1
MIRT037405 RPL18A ribosomal protein L18a 1 1
MIRT037406 PPP1CA protein phosphatase 1 catalytic subunit alpha 1 1
MIRT037407 TNRC6B trinucleotide repeat containing 6B 1 1
MIRT037408 PXK PX domain containing serine/threonine kinase like 1 1
MIRT037409 TDRKH tudor and KH domain containing 1 1
MIRT037410 PRRC2A proline rich coiled-coil 2A 1 1
MIRT037411 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT037412 NDE1 nudE neurodevelopment protein 1 1 1
MIRT037413 STK16 serine/threonine kinase 16 1 1
MIRT037414 PSMB2 proteasome subunit beta 2 1 1
MIRT037415 EPN1 epsin 1 1 1
MIRT037416 EN2 engrailed homeobox 2 1 1
MIRT037417 LARP1 La ribonucleoprotein domain family member 1 1 1
MIRT037418 SRCAP Snf2 related CREBBP activator protein 1 1
MIRT037419 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 1 1
MIRT037420 AP2A2 adaptor related protein complex 2 alpha 2 subunit 1 1
MIRT037421 ACTG1 actin gamma 1 1 1
MIRT037422 PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing 1 1
MIRT037423 UBE2O ubiquitin conjugating enzyme E2 O 1 1
MIRT037424 KLHL15 kelch like family member 15 1 1
MIRT037425 SECISBP2 SECIS binding protein 2 1 1
MIRT037426 KIAA0922 transmembrane 131 like 1 1
MIRT037427 PTMA prothymosin, alpha 1 1
MIRT037428 WDR45B WD repeat domain 45B 1 1
MIRT037429 ZNF282 zinc finger protein 282 1 1
MIRT037430 GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 1 1
MIRT037431 TNKS tankyrase 1 1
MIRT037432 NOP2 NOP2 nucleolar protein 1 1
MIRT037433 GAK cyclin G associated kinase 1 1
MIRT037434 ATP6 ATP synthase F0 subunit 6 1 1
MIRT037435 DIDO1 death inducer-obliterator 1 1 1
MIRT037436 RPL3 ribosomal protein L3 1 1
MIRT037437 AIMP2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 1 1
MIRT037438 PIGC phosphatidylinositol glycan anchor biosynthesis class C 1 1
MIRT037439 ARHGEF2 Rho/Rac guanine nucleotide exchange factor 2 1 1
MIRT037440 USP21 ubiquitin specific peptidase 21 1 1
MIRT037441 NUFIP2 NUFIP2, FMR1 interacting protein 2 1 1
MIRT037442 RPS6 ribosomal protein S6 1 1
MIRT037443 ILKAP ILK associated serine/threonine phosphatase 1 1
MIRT037444 COX1 cytochrome c oxidase subunit I 1 1
MIRT037445 VPS37C VPS37C, ESCRT-I subunit 1 1
MIRT037446 CDK12 cyclin dependent kinase 12 1 1
MIRT037447 RBM8A RNA binding motif protein 8A 1 1
MIRT037448 CKB creatine kinase B 1 1
MIRT037449 DHX57 DExH-box helicase 57 1 1
MIRT037450 DDX23 DEAD-box helicase 23 1 1
MIRT037451 ABI3 ABI family member 3 1 1
MIRT037452 GATAD2B GATA zinc finger domain containing 2B 1 1
MIRT037453 PDPK1 3-phosphoinositide dependent protein kinase 1 1 1
MIRT037454 C17orf70 Fanconi anemia core complex associated protein 100 1 1
MIRT037455 SKI SKI proto-oncogene 1 1
MIRT037456 KCTD11 potassium channel tetramerization domain containing 11 1 1
MIRT037457 GNB2L1 receptor for activated C kinase 1 1 1
MIRT037458 NCOA3 nuclear receptor coactivator 3 1 1
MIRT037459 PAK4 p21 (RAC1) activated kinase 4 2 3
MIRT037460 GDI2 GDP dissociation inhibitor 2 1 1
MIRT037461 SLC2A4RG SLC2A4 regulator 1 1
MIRT037462 SLX4 SLX4 structure-specific endonuclease subunit 1 1
MIRT037463 COPA coatomer protein complex subunit alpha 1 1
MIRT037464 GPRASP2 G protein-coupled receptor associated sorting protein 2 1 1
MIRT037465 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 1 1
MIRT037466 LIMS1 LIM zinc finger domain containing 1 1 1
MIRT037467 COTL1 coactosin like F-actin binding protein 1 1 1
MIRT037468 CAPNS1 calpain small subunit 1 1 1
MIRT037469 FRZB frizzled-related protein 1 1
MIRT037470 UBQLN4 ubiquilin 4 1 1
MIRT037471 NUP153 nucleoporin 153 1 1
MIRT037472 TMEM175 transmembrane protein 175 1 1
MIRT037473 HIST1H2BD histone cluster 1 H2B family member d 1 1
MIRT037474 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT037475 BCL2L12 BCL2 like 12 1 1
MIRT037476 HIST2H2AA3 histone cluster 2 H2A family member a3 1 1
MIRT037477 MINK1 misshapen like kinase 1 1 1
MIRT037478 PDXK pyridoxal kinase 1 1
MIRT037479 FAM110A family with sequence similarity 110 member A 1 1
MIRT037480 ZNF598 zinc finger protein 598 1 1
MIRT037481 ILK integrin linked kinase 1 1
MIRT037482 HINT1 histidine triad nucleotide binding protein 1 1 1
MIRT037483 WBP2 WW domain binding protein 2 1 1
MIRT037484 CYTB cytochrome b 1 1
MIRT037485 SCAMP2 secretory carrier membrane protein 2 1 1
MIRT037486 TRIM33 tripartite motif containing 33 1 1
MIRT037487 SLC25A3 solute carrier family 25 member 3 1 1
MIRT037488 IRS4 insulin receptor substrate 4 1 1
MIRT037489 TSR1 TSR1, ribosome maturation factor 1 1
MIRT037490 TCOF1 treacle ribosome biogenesis factor 1 1 1
MIRT037491 ATXN2L ataxin 2 like 1 1
MIRT037492 MTOR mechanistic target of rapamycin kinase 1 1
MIRT037493 ZNF318 zinc finger protein 318 1 1
MIRT037494 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 3
MIRT037495 SAMD4B sterile alpha motif domain containing 4B 1 1
MIRT037496 STMN1 stathmin 1 1 1
MIRT037497 SAT1 spermidine/spermine N1-acetyltransferase 1 1 1
MIRT037498 SALL1 spalt like transcription factor 1 1 1
MIRT037499 ZSCAN18 zinc finger and SCAN domain containing 18 1 1
MIRT037500 SLC35D1 solute carrier family 35 member D1 1 1
MIRT037501 TM9SF3 transmembrane 9 superfamily member 3 1 1
MIRT037502 TIAM1 T-cell lymphoma invasion and metastasis 1 1 1
MIRT037503 CHD5 chromodomain helicase DNA binding protein 5 1 1
MIRT037504 BAG6 BCL2 associated athanogene 6 1 1
MIRT037505 MED28 mediator complex subunit 28 1 1
MIRT037506 ANKRD52 ankyrin repeat domain 52 1 1
MIRT037507 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 1 1
MIRT037508 PPDPF pancreatic progenitor cell differentiation and proliferation factor 1 1
MIRT037509 PRKACA protein kinase cAMP-activated catalytic subunit alpha 1 1
MIRT037510 HPCAL4 hippocalcin like 4 1 1
MIRT037511 ZNF256 zinc finger protein 256 1 1
MIRT037512 CGNL1 cingulin like 1 1 1
MIRT037513 TUBA1B tubulin alpha 1b 1 1
MIRT037514 LNPEP leucyl and cystinyl aminopeptidase 1 1
MIRT037515 PDE4A phosphodiesterase 4A 1 1
MIRT037516 HOXD11 homeobox D11 2 3
MIRT037517 QARS glutaminyl-tRNA synthetase 1 1
MIRT037518 G3BP1 G3BP stress granule assembly factor 1 1 1
MIRT037519 PLEKHM2 pleckstrin homology and RUN domain containing M2 1 1
MIRT037520 POLR2A RNA polymerase II subunit A 1 1
MIRT037521 KIAA1462 junctional cadherin 5 associated 1 1
MIRT037522 SF3A1 splicing factor 3a subunit 1 1 1
MIRT037523 YBX1 Y-box binding protein 1 1 1
MIRT037524 PTGES3 prostaglandin E synthase 3 1 1
MIRT037525 FOXO3 forkhead box O3 1 1
MIRT037526 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 1 1
MIRT037527 AARS alanyl-tRNA synthetase 1 1
MIRT037528 ZNF155 zinc finger protein 155 1 1
MIRT037529 NCS1 neuronal calcium sensor 1 1 1
MIRT037530 FKBP4 FK506 binding protein 4 1 1
MIRT037531 ARHGDIA Rho GDP dissociation inhibitor alpha 1 1
MIRT037532 MAPK7 mitogen-activated protein kinase 7 1 1
MIRT037533 AGPAT2 1-acylglycerol-3-phosphate O-acyltransferase 2 1 1
MIRT037534 HIST1H1E histone cluster 1 H1 family member e 1 1
MIRT037535 MLF2 myeloid leukemia factor 2 1 1
MIRT037536 EDC3 enhancer of mRNA decapping 3 1 1
MIRT037537 CHRAC1 chromatin accessibility complex 1 1 1
MIRT037538 WIPF3 WAS/WASL interacting protein family member 3 1 1
MIRT037539 COX2 cytochrome c oxidase subunit II 1 1
MIRT037540 SRSF1 serine and arginine rich splicing factor 1 1 1
MIRT037541 CTNNBIP1 catenin beta interacting protein 1 1 1
MIRT037542 RPL4 ribosomal protein L4 1 1
MIRT037543 COX3 cytochrome c oxidase III 1 1
MIRT037544 DDX54 DEAD-box helicase 54 1 1
MIRT037545 TOB2 transducer of ERBB2, 2 1 1
MIRT037546 MAN2C1 mannosidase alpha class 2C member 1 1 1
MIRT037547 SMCR7L mitochondrial elongation factor 1 1 1
MIRT037548 RPLP1 ribosomal protein lateral stalk subunit P1 1 1
MIRT037549 RAN RAN, member RAS oncogene family 1 1
MIRT037550 NONO non-POU domain containing octamer binding 1 1
MIRT037551 CYB5R3 cytochrome b5 reductase 3 1 1
MIRT037552 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 1 1
MIRT037553 COLGALT1 collagen beta(1-O)galactosyltransferase 1 1 1
MIRT037554 MGRN1 mahogunin ring finger 1 1 1
MIRT037555 ANAPC1 anaphase promoting complex subunit 1 1 1
MIRT037556 TBX1 T-box 1 1 1
MIRT037557 NXPH4 neurexophilin 4 1 1
MIRT037558 HSPA1B heat shock protein family A (Hsp70) member 1B 1 1
MIRT037559 UBE2A ubiquitin conjugating enzyme E2 A 1 1
MIRT037560 KPNB1 karyopherin subunit beta 1 1 1
MIRT037561 NDUFB10 NADH:ubiquinone oxidoreductase subunit B10 1 1
MIRT037562 SYMPK symplekin 1 1
MIRT037563 SYPL1 synaptophysin like 1 1 1
MIRT037564 LRP3 LDL receptor related protein 3 1 1
MIRT037565 DDX24 DEAD-box helicase 24 1 1
MIRT037566 WDR37 WD repeat domain 37 1 1
MIRT037567 RPS14 ribosomal protein S14 1 1
MIRT037568 FAM53C family with sequence similarity 53 member C 1 1
MIRT037569 NMT1 N-myristoyltransferase 1 1 1
MIRT037570 PAGR1 PAXIP1 associated glutamate rich protein 1 1 1
MIRT037571 AKT2 AKT serine/threonine kinase 2 1 1
MIRT037572 TMEM14C transmembrane protein 14C 1 1
MIRT037573 MEX3D mex-3 RNA binding family member D 1 1
MIRT037574 BRAF B-Raf proto-oncogene, serine/threonine kinase 1 1
MIRT037575 POLR2L RNA polymerase II subunit L 1 1
MIRT037576 SERP1 stress associated endoplasmic reticulum protein 1 1 1
MIRT037577 C8orf33 chromosome 8 open reading frame 33 1 1
MIRT037578 NR1D2 nuclear receptor subfamily 1 group D member 2 1 1
MIRT037579 POLD3 DNA polymerase delta 3, accessory subunit 1 1
MIRT037580 HMGA1 high mobility group AT-hook 1 1 1
MIRT037581 SLC35B4 solute carrier family 35 member B4 1 1
MIRT037582 PELP1 proline, glutamate and leucine rich protein 1 1 1
MIRT037583 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 1 1
MIRT037584 RPL7A ribosomal protein L7a 1 1
MIRT037585 LAIR1 leukocyte associated immunoglobulin like receptor 1 1 1
MIRT037586 RPL10 ribosomal protein L10 1 1
MIRT037587 MRPS16 mitochondrial ribosomal protein S16 1 1
MIRT037588 SRM spermidine synthase 1 1
MIRT037589 EIF3K eukaryotic translation initiation factor 3 subunit K 1 1
MIRT037590 DESI1 desumoylating isopeptidase 1 1 1
MIRT037591 BET1 Bet1 golgi vesicular membrane trafficking protein 1 1
MIRT037592 HTRA2 HtrA serine peptidase 2 1 1
MIRT037593 LARP6 La ribonucleoprotein domain family member 6 1 1
MIRT037594 NOTCH2 notch 2 1 1
MIRT037595 ADCY9 adenylate cyclase 9 1 1
MIRT037596 C6orf62 chromosome 6 open reading frame 62 1 1
MIRT037597 FBXL19 F-box and leucine rich repeat protein 19 1 1
MIRT037598 L3MBTL2 L3MBTL2, polycomb repressive complex 1 subunit 1 1
MIRT037599 TRIM28 tripartite motif containing 28 1 1
MIRT037600 LGALS3 galectin 3 1 1
MIRT037601 IGSF8 immunoglobulin superfamily member 8 1 1
MIRT037602 LIN37 lin-37 DREAM MuvB core complex component 1 1
MIRT037603 PTPRF protein tyrosine phosphatase, receptor type F 1 1
MIRT037604 MTSS1L MTSS1L, I-BAR domain containing 1 1
MIRT037605 TRMT2A tRNA methyltransferase 2 homolog A 1 1
MIRT037606 DVL1 dishevelled segment polarity protein 1 1 1
MIRT037607 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 1 1
MIRT037608 TOR2A torsin family 2 member A 1 1
MIRT037609 RPS6KA5 ribosomal protein S6 kinase A5 1 1
MIRT037610 SMYD4 SET and MYND domain containing 4 1 1
MIRT037611 TJAP1 tight junction associated protein 1 1 1
MIRT037612 IRAK1 interleukin 1 receptor associated kinase 1 1 1
MIRT037613 PPM1M protein phosphatase, Mg2+/Mn2+ dependent 1M 1 1
MIRT037614 EIF4A2 eukaryotic translation initiation factor 4A2 1 1
MIRT037615 GFER growth factor, augmenter of liver regeneration 1 1
MIRT037616 PKP2 plakophilin 2 1 1
MIRT037617 FARSB phenylalanyl-tRNA synthetase beta subunit 1 1
MIRT037618 OPRD1 opioid receptor delta 1 1 1
MIRT037619 CCNY cyclin Y 1 1
MIRT037620 CNOT1 CCR4-NOT transcription complex subunit 1 1 1
MIRT037621 CXCL16 C-X-C motif chemokine ligand 16 1 1
MIRT037622 CEBPA CCAAT/enhancer binding protein alpha 1 1
MIRT037623 DDX11 DEAD/H-box helicase 11 1 1
MIRT037624 URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) 1 1
MIRT037625 SBF1 SET binding factor 1 1 1
MIRT037626 GNB2 G protein subunit beta 2 1 1
MIRT037627 KMT2D lysine methyltransferase 2D 2 3
MIRT037628 DDX17 DEAD-box helicase 17 1 1
MIRT037629 SORBS3 sorbin and SH3 domain containing 3 1 1
MIRT037630 TAPBP TAP binding protein 1 1
MIRT037631 BCR BCR, RhoGEF and GTPase activating protein 1 1
MIRT037632 RPL18 ribosomal protein L18 1 1
MIRT037633 INTS3 integrator complex subunit 3 1 1
MIRT037634 CDC25B cell division cycle 25B 1 1
MIRT037635 LDOC1L retrotransposon Gag like 6 1 1
MIRT037636 TUB tubby bipartite transcription factor 1 1
MIRT037637 NUDT2 nudix hydrolase 2 1 1
MIRT037638 CDAN1 codanin 1 1 1
MIRT037639 MRS2 MRS2, magnesium transporter 1 1
MIRT037640 PYGB glycogen phosphorylase B 1 1
MIRT037641 LDLRAD3 low density lipoprotein receptor class A domain containing 3 1 1
MIRT037642 COL5A1 collagen type V alpha 1 chain 1 1
MIRT037643 ATF7IP activating transcription factor 7 interacting protein 1 1
MIRT037644 AGO1 argonaute 1, RISC catalytic component 1 1
MIRT037645 ZNF212 zinc finger protein 212 1 1
MIRT037646 TSC2 TSC complex subunit 2 1 1
MIRT037647 FASN fatty acid synthase 1 1
MIRT037648 NOL9 nucleolar protein 9 1 1
MIRT037649 CLUH clustered mitochondria homolog 1 1
MIRT037650 PHF8 PHD finger protein 8 1 1
MIRT037651 EIF4G1 eukaryotic translation initiation factor 4 gamma 1 1 1
MIRT037652 TRAPPC12 trafficking protein particle complex 12 1 1
MIRT037653 HOXC11 homeobox C11 1 1
MIRT037654 DGCR14 ess-2 splicing factor homolog 1 1
MIRT037655 SLC25A1 solute carrier family 25 member 1 1 1
MIRT037656 MEX3C mex-3 RNA binding family member C 1 1
MIRT037657 RAI1 retinoic acid induced 1 1 1
MIRT037658 LY6E lymphocyte antigen 6 family member E 1 1
MIRT037659 SEC16A SEC16 homolog A, endoplasmic reticulum export factor 1 1
MIRT037660 RPL37 ribosomal protein L37 1 1
MIRT037661 CNN2 calponin 2 1 1
MIRT037662 ALDH18A1 aldehyde dehydrogenase 18 family member A1 1 1
MIRT037663 POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 1 1
MIRT037664 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT037665 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 1 1
MIRT037666 PTPMT1 protein tyrosine phosphatase, mitochondrial 1 1 1
MIRT037667 NCEH1 neutral cholesterol ester hydrolase 1 1 1
MIRT037668 ART5 ADP-ribosyltransferase 5 1 1
MIRT037669 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT037670 NCL nucleolin 1 1
MIRT037671 NCKAP5L NCK associated protein 5 like 1 1
MIRT037672 ZCCHC14 zinc finger CCHC-type containing 14 1 1
MIRT037673 CCDC71 coiled-coil domain containing 71 1 1
MIRT037674 SURF4 surfeit 4 1 1
MIRT037675 RPL13 ribosomal protein L13 1 1
MIRT037676 ACTN4 actinin alpha 4 1 1
MIRT037677 PA2G4 proliferation-associated 2G4 1 1
MIRT037678 MIF macrophage migration inhibitory factor 1 1
MIRT037679 UBE2N ubiquitin conjugating enzyme E2 N 1 1
MIRT037680 LYNX1 Ly6/neurotoxin 1 1 1
MIRT037681 TACC3 transforming acidic coiled-coil containing protein 3 1 1
MIRT037682 GSR glutathione-disulfide reductase 1 1
MIRT037683 GSK3A glycogen synthase kinase 3 alpha 1 1
MIRT037684 ZMYM3 zinc finger MYM-type containing 3 1 1
MIRT037685 ERP29 endoplasmic reticulum protein 29 1 1
MIRT037686 MATR3 matrin 3 1 1
MIRT037687 FANCG Fanconi anemia complementation group G 1 1
MIRT037688 FAM83G family with sequence similarity 83 member G 1 1
MIRT037689 DUSP18 dual specificity phosphatase 18 1 1
MIRT037690 MYC MYC proto-oncogene, bHLH transcription factor 3 2
MIRT037691 TSPAN7 tetraspanin 7 1 1
MIRT037692 ATMIN ATM interactor 1 1
MIRT037693 SEPT2 septin 2 1 1
MIRT037694 FOXRED2 FAD dependent oxidoreductase domain containing 2 1 1
MIRT037695 TECR trans-2,3-enoyl-CoA reductase 1 1
MIRT037696 MRPL11 mitochondrial ribosomal protein L11 1 1
MIRT037697 IP6K1 inositol hexakisphosphate kinase 1 1 1
MIRT037698 PSMD4 proteasome 26S subunit, non-ATPase 4 1 1
MIRT037699 SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 1 1
MIRT037700 CTNNB1 catenin beta 1 1 1
MIRT037701 TMEM189 transmembrane protein 189 1 1
MIRT037702 LDLR low density lipoprotein receptor 1 1
MIRT037703 OGFR opioid growth factor receptor 1 1
MIRT037704 ADAP2 ArfGAP with dual PH domains 2 1 1
MIRT037705 LIPA lipase A, lysosomal acid type 1 1
MIRT037706 SNAPC4 small nuclear RNA activating complex polypeptide 4 1 1
MIRT037707 FBN2 fibrillin 2 1 1
MIRT037708 ZNF704 zinc finger protein 704 1 1
MIRT037709 EIF3M eukaryotic translation initiation factor 3 subunit M 1 1
MIRT037710 SMC1A structural maintenance of chromosomes 1A 1 1
MIRT037711 FZR1 fizzy and cell division cycle 20 related 1 1 1
MIRT037712 NANOS1 nanos C2HC-type zinc finger 1 1 1
MIRT037713 PRR12 proline rich 12 1 1
MIRT037714 PHC2 polyhomeotic homolog 2 1 1
MIRT037715 NOP9 NOP9 nucleolar protein 1 1
MIRT037716 HM13 histocompatibility minor 13 1 1
MIRT037717 PRDX5 peroxiredoxin 5 1 1
MIRT037718 IRGQ immunity related GTPase Q 1 1
MIRT037719 TGFB1 transforming growth factor beta 1 7 2
MIRT037720 MARCH3 membrane associated ring-CH-type finger 3 1 1
MIRT037721 TBX2 T-box 2 1 1
MIRT037722 TSC22D3 TSC22 domain family member 3 1 1
MIRT037723 DUT deoxyuridine triphosphatase 1 1
MIRT037724 FAM171A2 family with sequence similarity 171 member A2 1 1
MIRT037725 FGFR1 fibroblast growth factor receptor 1 1 1
MIRT037726 FRAT1 FRAT1, WNT signaling pathway regulator 1 1
MIRT037727 PSMD11 proteasome 26S subunit, non-ATPase 11 1 1
MIRT037728 PABPC1 poly(A) binding protein cytoplasmic 1 1 1
MIRT037729 ENO1 enolase 1 1 1
MIRT037730 AP3D1 adaptor related protein complex 3 delta 1 subunit 1 1
MIRT037731 TUBA1A tubulin alpha 1a 1 1
MIRT037732 ULK3 unc-51 like kinase 3 1 1
MIRT037733 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha 1 1
MIRT037734 SLC25A46 solute carrier family 25 member 46 1 1
MIRT037735 MED15 mediator complex subunit 15 1 1
MIRT037736 IRF2BP1 interferon regulatory factor 2 binding protein 1 1 1
MIRT037737 UBA1 ubiquitin like modifier activating enzyme 1 1 1
MIRT037738 ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase 1 1
MIRT037739 CTNNA1 catenin alpha 1 1 1
MIRT037740 ADRM1 adhesion regulating molecule 1 1 1
MIRT037741 CCDC106 coiled-coil domain containing 106 1 1
MIRT054493 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 3 1
MIRT451195 PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 2 2
MIRT452931 DISC1 disrupted in schizophrenia 1 2 2
MIRT455468 LYPLA2 lysophospholipase II 2 2
MIRT457068 TOR4A torsin family 4 member A 2 2
MIRT464195 VGLL4 vestigial like family member 4 2 4
MIRT483030 KHSRP KH-type splicing regulatory protein 2 4
MIRT486062 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT486120 INO80E INO80 complex subunit E 2 2
MIRT486866 DPF1 double PHD fingers 1 2 2
MIRT488343 PAX2 paired box 2 2 2
MIRT488790 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT490249 MFI2 melanotransferrin 2 2
MIRT490264 HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2 2
MIRT490756 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT492321 SETD1B SET domain containing 1B 2 2
MIRT492851 NRGN neurogranin 2 2
MIRT499604 ANKRD45 ankyrin repeat domain 45 2 2
MIRT500189 BARX1 BARX homeobox 1 2 4
MIRT516765 FAM212B family with sequence similarity 212 member B 2 4
MIRT517949 TRIM59 tripartite motif containing 59 2 2
MIRT521182 SCAF4 SR-related CTD associated factor 4 2 2
MIRT526462 OSBPL5 oxysterol binding protein like 5 2 2
MIRT535148 PLEKHG5 pleckstrin homology and RhoGEF domain containing G5 2 2
MIRT569528 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT570593 NFIX nuclear factor I X 2 2
MIRT571219 F2R coagulation factor II thrombin receptor 2 2
MIRT574145 MARVELD1 MARVEL domain containing 1 2 2
MIRT608758 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT649509 RAB17 RAB17, member RAS oncogene family 2 2
MIRT692165 RNF207 ring finger protein 207 2 2
MIRT703495 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT711081 NEUROD2 neuronal differentiation 2 2 2
MIRT712090 UNC13A unc-13 homolog A 2 2
MIRT712531 CYTH2 cytohesin 2 2 2
MIRT712755 GMDS GDP-mannose 4,6-dehydratase 2 2
MIRT712893 TGFA transforming growth factor alpha 2 2
MIRT714684 PRX periaxin 2 2
MIRT714723 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714814 NOB1 NIN1/PSMD8 binding protein 1 homolog 2 2
MIRT716774 C1orf229 chromosome 1 open reading frame 229 2 2
MIRT717511 HRNR hornerin 2 2
MIRT717653 THBS2 thrombospondin 2 2 2
MIRT719595 PIAS4 protein inhibitor of activated STAT 4 2 2
MIRT720525 PTGR2 prostaglandin reductase 2 2 2
MIRT724925 VPS18 VPS18, CORVET/HOPS core subunit 2 2
MIRT737146 NOS3 nitric oxide synthase 3 1 0
MIRT756003 SLC7A5 solute carrier family 7 member 5 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-744 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-744 Tert-butyl hydroperoxide (t-BHP) NULL 6410 Microarray mouse auditory cells 20510889 2010 up-regulated
miR-744 Ursodeoxycholic acid (UDCA) approved 31401 Microarray rat Liver 20689055 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-744 Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901)
hsa-mir-744 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-744 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-744 Fluorouracil 3385 NSC19893 approved resistant cell line (OE19)
hsa-mir-744 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-mir-744 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-744 Cisplatin 5460033 NSC119875 approved resistant cell line (SGC-7901)
hsa-miR-744-5p [1,1'-binaphthalene]-2,2',3,3'-tetrol 316673 NSC245006 sensitive
hsa-miR-744-5p 4-n-[12-[(5-amino-6-chloropyrimidin-4-yl)amino]dodecyl]-6-chloropyrimidine-4,5-diamine 358989 NSC619196 sensitive
hsa-miR-744-5p 5,7-dibromo-2-[(e)-2-(4-hydroxy-3-methoxyphenyl)ethenyl]quinolin-8-ol 135460261 NSC67090 sensitive
hsa-miR-744-5p Benzyl 2-(dibenzylamino)-3-phenylpropanoate 375616 NSC655438 sensitive
hsa-miR-744-5p N'-[(Z)-[(4Z)-2-(1,3-benzodioxol-5-yl)-4-[[4-oxo-4-[2-(trifluoromethyl)anilino]butanoyl]hydrazinylidene]chromen-3-ylidene]amino]-N-[2-(trifluoromethyl)phenyl]butanediamide 6399328 NSC641210 sensitive
hsa-miR-744-5p Paullone analog 47 396411 NSC702373 sensitive
hsa-miR-744-5p Ursa-11,13(18)-dien-28-oic acid-3.beta.-ol 378695 NSC661747 sensitive
hsa-miR-744-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7, LY2)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-miR-744-5p Carboplatin 38904 NSC241240 approved sensitive High Ovarian Cancer tissue and cell line (MDAH-2274, SKOV3)
hsa-miR-744-5p Gefitinib 123631 NSC715055 approved resistant High Lung Adenocarcinoma cell line (A549)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Squamous Cell Carcinoma cell line (KYSE410)
hsa-miR-744-5p Tamoxifen 2733525 NSC180973 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-744-5p Vinorelbine 44424639 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-744-5p Epirubicin 41867 NSC256942 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-744-5p Erlotinib 176870 NSC718781 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-744-5p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-744-5p Sunitinib 5329102 NSC750690 approved sensitive High Renal Cell Cancer tissue
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-744-5p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (HepG2)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901, BGC-823)
hsa-miR-744-5p Oxaliplatin 6857599 NSC266046 approved resistant Low Colorectal Cancer cell line (HCT-116)
hsa-miR-744-5p Bortezomib 387447 NSC681239 approved sensitive Low Multiple Myeloma tissue
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-744-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-744-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-744-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-744-5p Fluorouracil 3385 NSC19893 approved sensitive cell line (HCT15)
hsa-miR-744-5p 4-Hydroxytamoxifen+Tamoxifen sensitive cell line (LY2)
hsa-miR-744-5p Ethanol+Tamoxifen sensitive cell line (LY2)
hsa-miR-744-5p Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-miR-744-5p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-miR-744-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (MDA-231)
hsa-miR-744-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (PC3PR20)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)
hsa-miR-744-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (H23)

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