miRTarBase - #MIRT464557


—
pre-miRNA Information
pre-miRNA hsa-mir-4755   
Genomic Coordinates chr20: 34049119 - 34049190
Description Homo sapiens miR-4755 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4755-3p
Sequence 44| AGCCAGGCUCUGAAGGGAAAGU |65
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 5 20 + 34049166 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs886558705 4 dbSNP
rs1461744624 6 dbSNP
rs747339626 8 dbSNP
rs1034183574 20 dbSNP
rs1434468382 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol UBTF   
Synonyms NOR-90, UBF, UBF-1, UBF1, UBF2
Description upstream binding transcription factor, RNA polymerase I
Transcript NM_001076683   
Other Transcripts NM_001076684 , NM_014233   
Expression
Putative miRNA Targets on UBTF
3'UTR of UBTF
(miRNA target sites are highlighted)		 
>UBTF|NM_001076683|3'UTR
   1 GGCTCAGCCCCACCCCAGGGCAGCCAGGGAGAGCCCAGGAGCTCCCCTCCCCAACTGACCACCTTTGTTTCTCCCCCATG
  81 TTCTGTCCCTTGCCCCCCTGGCCTCCCCCACTTTCTTTCTTTCTTTAAAAAAAAAAAAAAATACGGTGGGGGTAGGGGGC
 161 TGGAGGAGCCCAGGCCAGGACTCTGCAGCCTCAGAGACATCAGCCCTTGGGGGTCCTCCTCCAGGGACAGCAACTATCAG
 241 ACTAAGCCAGCACCGGACCAGCCTGGCCCACCCCACCCACTTCTGCACTTGCGGTTCCGGCATGGACAATGGACCGGAGA
 321 GTGGGGGTGGGGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGGGGTGGAAGCTTGGGG
 401 AAGACCCATTCCTTCCCAGAGGGGCCTGCCACCTGGACCCCTGCATTGGAACTGGAGGCAGGGAACATGGGGAGGAGGAG
 481 GGTCGGTGCCTTCAAGAAAACAGGCACTGCCCTGGTGGCCCTCTCCCCTGCCCCCTGCAGGAAGGAGCTGCCTGGACCCG
 561 TTCATGGGGGAGGGGGCAGAAGTGTTTTTTATATATGTGTATATATTTTTTTTTAAGCTCTGAGCTGTCAACGAGACGTT
 641 TCCTACCGATCTCGGCTGCCGTCTCTGTTGTCATTTCTGGGAGAGGGAGGGTTTAGGGGTAGATTTGGAACCTTTTAAAA
 721 ATGGTCTTGATGTATGTGGAAGAGAGTATGTGTATGTGTGTTCCTGTACATAGCATGGGTGCAGCTGTGGATGTGTGCAA
 801 AAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAATCTGGAAAAAGG
 881 GTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCCCCGTTCTCCACATCCTCTGTTTTGCCCA
 961 GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTGCCAGAGTCACA
1041 TGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTAT
1121 TTGATGGAAAAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACCTGGGCTTCAAGAAATG
1201 TGCTGGGAGCTCCTAACTTACACATCCCTCCAGCCTTCCTTGAATCCTCCCACCACCCCCTATTTCCTTTAATTTCTCAG
1281 GTCTGCTCCCTCCTCCCCCAACCCCACAGCTGGGCAAGAAGTCTGCAAAAGCTGCATCTGCAGCTGTCTCTAACTCTTCC
1361 CAGCCATCTCCCGTATTTTTTGGTACCTTGATTCCTTGACTCTTAATAAGCCAAGCCACCTTATCTCTGTAGTTCTTATT
1441 TTTTTGTTGACTAAATTTGGGGGGTTCTTTTTTATGGTCATGTCACTGACCTATTAAATTGGGGCTTGGTGCTTTTCCAC
1521 CTTCCCCCTCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGG
1601 CCCTGGTCCCAGAGAGGCTGGTGGGTCCCTCTCCCAAAGGAAGGCAGACAGTCTCTGCTTTGCCTTGGACCTTGGTGCTG
1681 GGGGTGGGGAGGCCTGGGGGGGACACTCCCCACTCCCATTCCCCTTCCTTTGTCCTAATCCTGGAATTAAGTACAGGGGT
1761 TTATAGGTTCTATTTCTTCCCAAGAGCCCTGCAAAGAACCCCAGTTTCCTATTTGGATGCCCCTACACTGTTGTGTTTCA
1841 GTGGAATGTATTTTCATTTAAAAACAACTTTGAATGGGGCACTTTTTCTTTCCTGTTTTAAAAATTGAAAAATTCTTACA
1921 GTACAAACAGGACTGTCAGGGTGGGGGTGTTGGTGCTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGAT
2001 GGCTGGGGTGGGAAGACCCCCATCCCCACCCCCAACTTCTTTTCTAATATTTAAGGAGTGTTTTGTAGGATTCAACAACC
2081 ACCACAACTTGAATTTGTATCATGGGAGGTGGGAGGGAGTGGCTTAGAGGTGTCTGCCTATGCTTAAAGCCAACTGTGGA
2161 AGTTTTGTTTTCCCTTTTTTGTATAATAAAGTGAAAAACAAAGGTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
2241 A
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugaAAGGGAAGUC------UCGGACCGa 5'
             ||| : | ||      |||||||| 
Target 5' ctgTTCATCTGAGAGGCCAAGCCTGGCc 3'
 1140 - 1167 149.00 -15.30
2 
miRNA  3' ugaaagggaagucUCGGACCGa 5'
                       |||||||| 
Target 5' ccagcaccggaccAGCCTGGCc 3'
 247 - 268 145.00 -16.40
3 
miRNA  3' ugaaAGGGAA--GUCU---CGGACCGa 5'
              |:||||  ||||   ||||| | 
Target 5' cccaTTCCTTCCCAGAGGGGCCTGCCa 3'
 405 - 431 132.00 -17.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30455912 11 COSMIC
COSN4622666 20 COSMIC
COSN30473083 27 COSMIC
COSN7812720 47 COSMIC
COSN30524122 51 COSMIC
COSN23843802 87 COSMIC
COSN1197233 127 COSMIC
COSN26548197 526 COSMIC
COSN26563639 548 COSMIC
COSN31579000 605 COSMIC
COSN31555700 607 COSMIC
COSN30543969 730 COSMIC
COSN29036550 810 COSMIC
COSN9669445 887 COSMIC
COSN18972964 926 COSMIC
COSN22024291 1488 COSMIC
COSN7435858 1666 COSMIC
COSN7435857 1703 COSMIC
COSN31490284 1915 COSMIC
COSN31515775 1915 COSMIC
COSN31563280 2003 COSMIC
COSN31608808 2047 COSMIC
COSN31577382 2142 COSMIC
rs9910055 1573 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs572638952 1 dbSNP
rs1265946955 2 dbSNP
rs906051185 4 dbSNP
rs770607035 5 dbSNP
rs1185159203 6 dbSNP
rs760152795 7 dbSNP
rs1044566914 9 dbSNP
rs770642757 11 dbSNP
rs377318867 13 dbSNP
rs138321189 14 dbSNP
rs1326593392 18 dbSNP
rs200826893 20 dbSNP
rs748055414 26 dbSNP
rs991881928 27 dbSNP
rs755405644 35 dbSNP
rs1299111150 36 dbSNP
rs1336906138 41 dbSNP
rs1381408521 44 dbSNP
rs1386090475 44 dbSNP
rs1394973396 51 dbSNP
rs1407861849 52 dbSNP
rs768525090 54 dbSNP
rs749128923 55 dbSNP
rs191365085 57 dbSNP
rs747564580 57 dbSNP
rs1388247613 58 dbSNP
rs1159358193 59 dbSNP
rs756454628 67 dbSNP
rs1375930444 69 dbSNP
rs1198789598 71 dbSNP
rs1455046583 74 dbSNP
rs745931206 75 dbSNP
rs1295206884 78 dbSNP
rs966720238 78 dbSNP
rs1198473391 79 dbSNP
rs781265823 80 dbSNP
rs145623357 87 dbSNP
rs1283202685 89 dbSNP
rs1205286374 92 dbSNP
rs752054456 93 dbSNP
rs552987056 94 dbSNP
rs753105726 95 dbSNP
rs765999022 97 dbSNP
rs776106868 99 dbSNP
rs146797528 100 dbSNP
rs569660738 102 dbSNP
rs1432712005 104 dbSNP
rs772748372 105 dbSNP
rs1037256676 108 dbSNP
rs1386207819 109 dbSNP
rs2229285 109 dbSNP
rs992321212 110 dbSNP
rs1434634002 113 dbSNP
rs1285308881 114 dbSNP
rs1343839232 119 dbSNP
rs1232869319 121 dbSNP
rs1255191595 123 dbSNP
rs1351830417 126 dbSNP
rs1283738260 127 dbSNP
rs1324381589 127 dbSNP
rs1487942132 133 dbSNP
rs1199474248 137 dbSNP
rs75104069 140 dbSNP
rs1431085797 141 dbSNP
rs1197806076 142 dbSNP
rs1360404189 142 dbSNP
rs1455613633 142 dbSNP
rs374363130 142 dbSNP
rs1425890145 143 dbSNP
rs1400196264 144 dbSNP
rs1388738411 145 dbSNP
rs956877320 147 dbSNP
rs918229577 152 dbSNP
rs1307907862 153 dbSNP
rs1337776894 154 dbSNP
rs886128047 156 dbSNP
rs536050870 163 dbSNP
rs1412486599 166 dbSNP
rs962584698 176 dbSNP
rs1198412360 181 dbSNP
rs1223213347 182 dbSNP
rs1018092575 184 dbSNP
rs1293318842 189 dbSNP
rs1487179002 192 dbSNP
rs1476867978 196 dbSNP
rs1208736308 203 dbSNP
rs1248112427 205 dbSNP
rs1250726153 208 dbSNP
rs1177124951 213 dbSNP
rs1221766555 214 dbSNP
rs985252589 216 dbSNP
rs955495278 221 dbSNP
rs1367251767 223 dbSNP
rs1038826495 226 dbSNP
rs565700500 233 dbSNP
rs944550960 237 dbSNP
rs1030164735 243 dbSNP
rs1398874056 249 dbSNP
rs750548177 254 dbSNP
rs547888617 255 dbSNP
rs891805822 258 dbSNP
rs1032991739 260 dbSNP
rs1000476443 261 dbSNP
rs906103526 262 dbSNP
rs1314705417 264 dbSNP
rs1044621655 268 dbSNP
rs532524933 273 dbSNP
rs1243377365 275 dbSNP
rs950197825 277 dbSNP
rs1458798783 280 dbSNP
rs966689049 285 dbSNP
rs895949646 292 dbSNP
rs1056628569 293 dbSNP
rs1462001904 294 dbSNP
rs989970877 298 dbSNP
rs929717460 299 dbSNP
rs959448498 300 dbSNP
rs1034189829 306 dbSNP
rs1003683329 309 dbSNP
rs970887398 311 dbSNP
rs1015778184 312 dbSNP
rs866503221 315 dbSNP
rs117467674 316 dbSNP
rs1175543432 317 dbSNP
rs772763701 323 dbSNP
rs1304401294 326 dbSNP
rs1048758664 327 dbSNP
rs770968010 328 dbSNP
rs1376843043 333 dbSNP
rs994912716 342 dbSNP
rs911135706 344 dbSNP
rs1191437568 346 dbSNP
rs985306201 355 dbSNP
rs955216334 356 dbSNP
rs944538817 357 dbSNP
rs573747907 359 dbSNP
rs149845965 362 dbSNP
rs989321188 368 dbSNP
rs1042322005 369 dbSNP
rs1212648456 371 dbSNP
rs945316672 380 dbSNP
rs915166647 389 dbSNP
rs989464660 398 dbSNP
rs959647722 410 dbSNP
rs956133517 421 dbSNP
rs1033458402 422 dbSNP
rs1263067480 424 dbSNP
rs531692944 425 dbSNP
rs1000193031 429 dbSNP
rs970004952 433 dbSNP
rs1471099473 435 dbSNP
rs1177939783 442 dbSNP
rs1023229949 451 dbSNP
rs1014484692 454 dbSNP
rs1465479231 455 dbSNP
rs1279755764 458 dbSNP
rs895990181 463 dbSNP
rs1015747233 466 dbSNP
rs561579481 467 dbSNP
rs1345727678 478 dbSNP
rs1220658072 480 dbSNP
rs1276947392 482 dbSNP
rs766876829 482 dbSNP
rs982992608 484 dbSNP
rs1047871838 485 dbSNP
rs1299981965 490 dbSNP
rs1192996360 491 dbSNP
rs1435919501 494 dbSNP
rs994351175 496 dbSNP
rs1027657933 511 dbSNP
rs896895217 515 dbSNP
rs543312323 516 dbSNP
rs941033561 519 dbSNP
rs1159604213 523 dbSNP
rs1362345603 527 dbSNP
rs910854545 528 dbSNP
rs1417839460 532 dbSNP
rs1297030603 534 dbSNP
rs527908125 534 dbSNP
rs1437995495 536 dbSNP
rs1272661686 538 dbSNP
rs1366493608 539 dbSNP
rs1224643237 544 dbSNP
rs1311965842 551 dbSNP
rs1352115528 559 dbSNP
rs1382044839 560 dbSNP
rs994489816 565 dbSNP
rs900190969 566 dbSNP
rs3169720 572 dbSNP
rs1008686595 579 dbSNP
rs1360735973 595 dbSNP
rs1481105297 598 dbSNP
rs1179000323 600 dbSNP
rs751894350 603 dbSNP
rs545569262 605 dbSNP
rs1042208342 606 dbSNP
rs1157909358 607 dbSNP
rs922453557 607 dbSNP
rs1385806047 612 dbSNP
rs1348903033 615 dbSNP
rs1406555364 615 dbSNP
rs988650162 618 dbSNP
rs377177156 632 dbSNP
rs1333767771 633 dbSNP
rs1428784439 634 dbSNP
rs956355954 637 dbSNP
rs1375230715 638 dbSNP
rs893700806 644 dbSNP
rs1054128162 647 dbSNP
rs1387923425 648 dbSNP
rs938006679 649 dbSNP
rs926643705 653 dbSNP
rs1438597712 654 dbSNP
rs979521220 655 dbSNP
rs536804421 656 dbSNP
rs982209429 660 dbSNP
rs1456238293 661 dbSNP
rs1177802478 662 dbSNP
rs949509556 665 dbSNP
rs1324341025 666 dbSNP
rs1160926423 667 dbSNP
rs908635058 667 dbSNP
rs1412514542 669 dbSNP
rs576906358 679 dbSNP
rs1465813423 681 dbSNP
rs1172286674 683 dbSNP
rs926059169 690 dbSNP
rs978804303 693 dbSNP
rs1449575915 696 dbSNP
rs1337849624 699 dbSNP
rs571411225 705 dbSNP
rs558226223 706 dbSNP
rs1340079923 710 dbSNP
rs1027221047 722 dbSNP
rs976100493 725 dbSNP
rs964402512 729 dbSNP
rs776096598 731 dbSNP
rs1317554312 733 dbSNP
rs1017729421 734 dbSNP
rs1014537212 742 dbSNP
rs1008572085 747 dbSNP
rs1484506479 750 dbSNP
rs527327773 751 dbSNP
rs1204250298 754 dbSNP
rs1026933494 758 dbSNP
rs1477828260 761 dbSNP
rs1195241022 763 dbSNP
rs762887268 766 dbSNP
rs1229365946 772 dbSNP
rs1464823982 773 dbSNP
rs773021175 779 dbSNP
rs1009377012 781 dbSNP
rs199695548 783 dbSNP
rs1413128923 788 dbSNP
rs1053695177 796 dbSNP
rs937958199 800 dbSNP
rs1401882301 803 dbSNP
rs762234503 804 dbSNP
rs905189237 804 dbSNP
rs1198527170 806 dbSNP
rs1275212310 806 dbSNP
rs755556498 806 dbSNP
rs1218139296 808 dbSNP
rs1277769177 808 dbSNP
rs1381250423 808 dbSNP
rs1046341245 810 dbSNP
rs1477289817 810 dbSNP
rs59928879 810 dbSNP
rs1303272860 811 dbSNP
rs111482977 812 dbSNP
rs1360050189 812 dbSNP
rs1491104383 812 dbSNP
rs949394281 814 dbSNP
rs1329584582 816 dbSNP
rs1368426545 816 dbSNP
rs908603930 816 dbSNP
rs982853548 817 dbSNP
rs1005231001 818 dbSNP
rs754891507 823 dbSNP
rs879160621 827 dbSNP
rs1209939090 829 dbSNP
rs149970908 829 dbSNP
rs3837836 829 dbSNP
rs58481905 829 dbSNP
rs1388808482 832 dbSNP
rs1367423760 840 dbSNP
rs554457992 848 dbSNP
rs1049368210 851 dbSNP
rs1377280678 852 dbSNP
rs1448738832 853 dbSNP
rs1162082613 855 dbSNP
rs1316305095 861 dbSNP
rs1244848471 864 dbSNP
rs1353800434 865 dbSNP
rs1208936742 866 dbSNP
rs920123251 872 dbSNP
rs933932979 880 dbSNP
rs1426133321 883 dbSNP
rs922539285 884 dbSNP
rs1415169850 888 dbSNP
rs1238058945 889 dbSNP
rs1053404713 893 dbSNP
rs1166973168 894 dbSNP
rs1182002272 902 dbSNP
rs1482298495 903 dbSNP
rs1457474857 905 dbSNP
rs1171582833 911 dbSNP
rs1402762662 915 dbSNP
rs1448673410 917 dbSNP
rs934517930 928 dbSNP
rs925746490 930 dbSNP
rs1206201912 931 dbSNP
rs775534610 934 dbSNP
rs534903450 935 dbSNP
rs1396591024 938 dbSNP
rs915941766 939 dbSNP
rs1314238886 943 dbSNP
rs1338121690 947 dbSNP
rs1232162982 948 dbSNP
rs369557079 951 dbSNP
rs765585314 956 dbSNP
rs1197106112 957 dbSNP
rs1257874615 960 dbSNP
rs987108405 962 dbSNP
rs1184039072 972 dbSNP
rs960607592 980 dbSNP
rs758918610 981 dbSNP
rs1426016534 984 dbSNP
rs1020695843 986 dbSNP
rs972692357 988 dbSNP
rs565653627 994 dbSNP
rs1353773051 1001 dbSNP
rs1466361660 1002 dbSNP
rs957887343 1005 dbSNP
rs1032628776 1012 dbSNP
rs1413583779 1018 dbSNP
rs548939952 1020 dbSNP
rs1341963694 1022 dbSNP
rs963592287 1029 dbSNP
rs1313352456 1032 dbSNP
rs1216475961 1038 dbSNP
rs1016364539 1039 dbSNP
rs1294413892 1040 dbSNP
rs372006844 1044 dbSNP
rs1212712069 1045 dbSNP
rs565939352 1047 dbSNP
rs770309861 1048 dbSNP
rs1410123249 1050 dbSNP
rs1389546729 1071 dbSNP
rs1013522090 1074 dbSNP
rs1476959325 1075 dbSNP
rs1291369109 1080 dbSNP
rs997862138 1081 dbSNP
rs900798109 1097 dbSNP
rs368250400 1117 dbSNP
rs920026337 1124 dbSNP
rs776222291 1125 dbSNP
rs538816508 1127 dbSNP
rs1434078716 1138 dbSNP
rs904379521 1139 dbSNP
rs1471886661 1142 dbSNP
rs761930872 1145 dbSNP
rs1287876834 1149 dbSNP
rs1042897646 1155 dbSNP
rs1183349141 1156 dbSNP
rs1221266957 1159 dbSNP
rs948816157 1160 dbSNP
rs151087663 1162 dbSNP
rs746671795 1165 dbSNP
rs1288783168 1169 dbSNP
rs993283010 1176 dbSNP
rs987072329 1201 dbSNP
rs1215180342 1203 dbSNP
rs938704521 1207 dbSNP
rs1489610918 1209 dbSNP
rs954346228 1219 dbSNP
rs913601877 1221 dbSNP
rs1159118732 1223 dbSNP
rs1382124140 1224 dbSNP
rs1417277812 1227 dbSNP
rs1157786546 1235 dbSNP
rs1265552149 1253 dbSNP
rs1350089350 1255 dbSNP
rs371691378 1259 dbSNP
rs1488860799 1266 dbSNP
rs972362476 1270 dbSNP
rs1292147022 1271 dbSNP
rs1370624056 1271 dbSNP
rs142928957 1276 dbSNP
rs1447996792 1280 dbSNP
rs12449732 1283 dbSNP
rs1312032635 1288 dbSNP
rs1260196776 1294 dbSNP
rs1223265376 1296 dbSNP
rs531757311 1297 dbSNP
rs1290743651 1298 dbSNP
rs567639156 1301 dbSNP
rs957986543 1307 dbSNP
rs566600577 1308 dbSNP
rs772908913 1310 dbSNP
rs1179056477 1313 dbSNP
rs1239900070 1317 dbSNP
rs1290041331 1321 dbSNP
rs1228789789 1322 dbSNP
rs986256538 1338 dbSNP
rs1298776553 1344 dbSNP
rs529254626 1345 dbSNP
rs1388104649 1352 dbSNP
rs71651947 1358 dbSNP
rs768987798 1360 dbSNP
rs953838436 1364 dbSNP
rs1024835425 1365 dbSNP
rs368843991 1366 dbSNP
rs887108639 1372 dbSNP
rs186897947 1373 dbSNP
rs1375302918 1374 dbSNP
rs1442193803 1382 dbSNP
rs1449441868 1390 dbSNP
rs1381344475 1395 dbSNP
rs1226704436 1397 dbSNP
rs1391456944 1405 dbSNP
rs1272736244 1406 dbSNP
rs1318920699 1407 dbSNP
rs1199013800 1410 dbSNP
rs1259814074 1413 dbSNP
rs900853121 1415 dbSNP
rs528010946 1419 dbSNP
rs560830882 1420 dbSNP
rs1201340668 1429 dbSNP
rs1185203875 1431 dbSNP
rs80038530 1439 dbSNP
rs140353172 1443 dbSNP
rs912761781 1446 dbSNP
rs1394871771 1447 dbSNP
rs948537343 1451 dbSNP
rs894280479 1453 dbSNP
rs1051338236 1455 dbSNP
rs946318942 1458 dbSNP
rs1057230062 1461 dbSNP
rs913487327 1462 dbSNP
rs1269944041 1463 dbSNP
rs1292798194 1464 dbSNP
rs1341343602 1467 dbSNP
rs147595057 1478 dbSNP
rs780499501 1480 dbSNP
rs1205602011 1491 dbSNP
rs1344058547 1493 dbSNP
rs988177675 1500 dbSNP
rs1208075679 1501 dbSNP
rs1256264269 1503 dbSNP
rs1254005342 1520 dbSNP
rs1477941758 1521 dbSNP
rs938742524 1522 dbSNP
rs1370997890 1524 dbSNP
rs1475268288 1524 dbSNP
rs1235014687 1529 dbSNP
rs919289060 1530 dbSNP
rs1312410440 1539 dbSNP
rs1427839105 1541 dbSNP
rs533314347 1542 dbSNP
rs1312344207 1549 dbSNP
rs1432280667 1560 dbSNP
rs543079106 1561 dbSNP
rs9910055 1573 dbSNP
rs969619676 1574 dbSNP
rs781326107 1575 dbSNP
rs953558452 1579 dbSNP
rs923408335 1580 dbSNP
rs761260024 1583 dbSNP
rs976549827 1585 dbSNP
rs1279529122 1588 dbSNP
rs965486668 1591 dbSNP
rs560575146 1592 dbSNP
rs541295042 1593 dbSNP
rs1446115882 1599 dbSNP
rs1248884615 1601 dbSNP
rs772422849 1601 dbSNP
rs1452964275 1602 dbSNP
rs1173495343 1605 dbSNP
rs1031368818 1611 dbSNP
rs1030017369 1622 dbSNP
rs1421552284 1629 dbSNP
rs1156945506 1630 dbSNP
rs1384502173 1634 dbSNP
rs1025531465 1635 dbSNP
rs1193876209 1637 dbSNP
rs1372826714 1650 dbSNP
rs1438459467 1664 dbSNP
rs1441740937 1664 dbSNP
rs995891788 1690 dbSNP
rs1241653623 1697 dbSNP
rs898521957 1697 dbSNP
rs998518735 1698 dbSNP
rs542590858 1702 dbSNP
rs879037954 1706 dbSNP
rs1273473577 1710 dbSNP
rs1225682730 1716 dbSNP
rs757337389 1717 dbSNP
rs1343710049 1719 dbSNP
rs1012811285 1720 dbSNP
rs1467379413 1725 dbSNP
rs1193441324 1727 dbSNP
rs1239292059 1730 dbSNP
rs1442140975 1731 dbSNP
rs183279698 1742 dbSNP
rs1363366689 1744 dbSNP
rs1244782588 1749 dbSNP
rs1057350823 1750 dbSNP
rs1392583942 1755 dbSNP
rs1459647431 1756 dbSNP
rs1336651924 1757 dbSNP
rs1396973391 1759 dbSNP
rs1377534093 1760 dbSNP
rs1002989154 1764 dbSNP
rs1393135487 1765 dbSNP
rs891299323 1766 dbSNP
rs1051227337 1784 dbSNP
rs553988004 1787 dbSNP
rs1274617101 1804 dbSNP
rs192552176 1810 dbSNP
rs764448429 1811 dbSNP
rs942040872 1814 dbSNP
rs758222505 1818 dbSNP
rs538466653 1819 dbSNP
rs1459481038 1822 dbSNP
rs909186115 1825 dbSNP
rs577735934 1835 dbSNP
rs1472462370 1839 dbSNP
rs1366662878 1840 dbSNP
rs73316181 1841 dbSNP
rs923490748 1843 dbSNP
rs1424422376 1845 dbSNP
rs936316715 1851 dbSNP
rs1485894381 1860 dbSNP
rs1475036467 1861 dbSNP
rs568543384 1871 dbSNP
rs1163937938 1872 dbSNP
rs1400671941 1877 dbSNP
rs1463341802 1882 dbSNP
rs1296328253 1886 dbSNP
rs1395717547 1889 dbSNP
rs367796281 1890 dbSNP
rs1396072323 1901 dbSNP
rs976647211 1905 dbSNP
rs1294653230 1906 dbSNP
rs925006019 1910 dbSNP
rs763232106 1915 dbSNP
rs1232376261 1919 dbSNP
rs1202635444 1930 dbSNP
rs1278447588 1932 dbSNP
rs1309574976 1933 dbSNP
rs965196672 1940 dbSNP
rs980926521 1952 dbSNP
rs947767773 1956 dbSNP
rs924357379 1964 dbSNP
rs991923436 1967 dbSNP
rs951233618 1974 dbSNP
rs1273166526 1975 dbSNP
rs1426074897 1980 dbSNP
rs1430037516 1992 dbSNP
rs1168102974 1993 dbSNP
rs1025961573 1995 dbSNP
rs977286809 1998 dbSNP
rs538371018 2005 dbSNP
rs144994852 2008 dbSNP
rs1413647337 2009 dbSNP
rs1286494646 2014 dbSNP
rs1007307287 2018 dbSNP
rs1208933335 2022 dbSNP
rs549441402 2022 dbSNP
rs891183297 2024 dbSNP
rs1029766068 2026 dbSNP
rs1010386030 2031 dbSNP
rs1237056082 2046 dbSNP
rs1012563082 2047 dbSNP
rs1278828145 2050 dbSNP
rs1347177561 2053 dbSNP
rs1217475813 2058 dbSNP
rs747118278 2061 dbSNP
rs891992371 2070 dbSNP
rs1350303925 2075 dbSNP
rs1035410107 2076 dbSNP
rs1003036797 2077 dbSNP
rs1433565555 2078 dbSNP
rs897610711 2093 dbSNP
rs1175375462 2097 dbSNP
rs1393220106 2099 dbSNP
rs368968434 2104 dbSNP
rs1433518023 2109 dbSNP
rs1411984776 2113 dbSNP
rs1371390377 2119 dbSNP
rs1428293077 2129 dbSNP
rs1036927504 2154 dbSNP
rs906110534 2157 dbSNP
rs118019638 2158 dbSNP
rs1403681994 2162 dbSNP
rs947735320 2175 dbSNP
rs1392919919 2177 dbSNP
rs759526399 2186 dbSNP
rs1164956562 2197 dbSNP
rs1475482465 2201 dbSNP
rs1056163286 2203 dbSNP
rs200146260 2203 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ugaaaGGGAAGUCUCGGACcga 5'
               | |||| |  |:||   
Target 5' ccaccCACUUCUGCACUUG--- 3'
 		7 - 25
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000343638.5 | 3UTR | CCCACCCCACCCACUUCUGCACUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
257 hsa-miR-4755-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT084352 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT138483 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT249872 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT312931 CREBRF CREB3 regulatory factor 2 2
MIRT338501 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT340629 PSMB2 proteasome subunit beta 2 2 2
MIRT373990 PEBP1 phosphatidylethanolamine binding protein 1 2 4
MIRT452590 CA6 carbonic anhydrase 6 2 2
MIRT454332 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT455870 SLC35C2 solute carrier family 35 member C2 2 2
MIRT464487 UCK2 uridine-cytidine kinase 2 2 2
MIRT464557 UBTF upstream binding transcription factor, RNA polymerase I 2 2
MIRT465299 TRIB1 tribbles pseudokinase 1 2 2
MIRT468020 SIN3B SIN3 transcription regulator family member B 2 2
MIRT469514 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470581 POTEM POTE ankyrin domain family member M 2 2
MIRT470611 POTEG POTE ankyrin domain family member G 2 2
MIRT472980 MRRF mitochondrial ribosome recycling factor 2 2
MIRT476445 GBA2 glucosylceramidase beta 2 2 2
MIRT478349 DDIT4 DNA damage inducible transcript 4 2 2
MIRT478788 CRTC2 CREB regulated transcription coactivator 2 2 2
MIRT480967 BBC3 BCL2 binding component 3 2 2
MIRT482609 ABHD14B abhydrolase domain containing 14B 2 2
MIRT487296 SLC38A9 solute carrier family 38 member 9 2 2
MIRT489906 LRG1 leucine rich alpha-2-glycoprotein 1 2 2
MIRT490916 STRN4 striatin 4 2 2
MIRT490957 PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F 2 4
MIRT491189 JUND JunD proto-oncogene, AP-1 transcription factor subunit 2 4
MIRT491745 SEMA3F semaphorin 3F 2 2
MIRT492342 SEPT8 septin 8 2 2
MIRT495340 RTN2 reticulon 2 2 2
MIRT496975 RPS6KA2 ribosomal protein S6 kinase A2 2 2
MIRT502206 HSPB8 heat shock protein family B (small) member 8 2 2
MIRT505375 TMEM154 transmembrane protein 154 2 4
MIRT508082 ANKRD52 ankyrin repeat domain 52 2 2
MIRT509557 ACTG1 actin gamma 1 2 4
MIRT510114 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT511356 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 6
MIRT513191 SLU7 SLU7 homolog, splicing factor 2 4
MIRT514432 SLC38A7 solute carrier family 38 member 7 2 2
MIRT514553 PTGR2 prostaglandin reductase 2 2 2
MIRT514782 RBM4B RNA binding motif protein 4B 2 2
MIRT515269 CSNK1E casein kinase 1 epsilon 2 2
MIRT515285 MSRB1 methionine sulfoxide reductase B1 2 2
MIRT515591 FBXL13 F-box and leucine rich repeat protein 13 2 2
MIRT515947 C9orf156 tRNA methyltransferase O 2 2
MIRT516283 DBT dihydrolipoamide branched chain transacylase E2 2 2
MIRT516519 PARK2 parkin RBR E3 ubiquitin protein ligase 2 2
MIRT517472 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT517621 DEGS1 delta 4-desaturase, sphingolipid 1 2 2
MIRT519092 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 4
MIRT519109 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT519398 DNASE2 deoxyribonuclease 2, lysosomal 2 4
MIRT519709 ZNF584 zinc finger protein 584 2 4
MIRT519772 ZNF354B zinc finger protein 354B 2 6
MIRT519826 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT520309 UBXN2A UBX domain protein 2A 2 2
MIRT521248 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT522057 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT522649 MANEAL mannosidase endo-alpha like 2 2
MIRT524132 DMXL1 Dmx like 1 2 2
MIRT525151 ZNF329 zinc finger protein 329 2 2
MIRT525307 FANCA Fanconi anemia complementation group A 2 4
MIRT528539 TTC22 tetratricopeptide repeat domain 22 2 2
MIRT529690 PRIM1 DNA primase subunit 1 2 2
MIRT531880 SCN1B sodium voltage-gated channel beta subunit 1 2 2
MIRT533663 TMF1 TATA element modulatory factor 1 2 2
MIRT534848 RAB15 RAB15, member RAS oncogene family 2 4
MIRT537980 DPP8 dipeptidyl peptidase 8 2 2
MIRT538880 BTBD1 BTB domain containing 1 2 2
MIRT541728 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT545126 ANXA5 annexin A5 2 2
MIRT550206 MAVS mitochondrial antiviral signaling protein 2 4
MIRT553643 TJAP1 tight junction associated protein 1 2 2
MIRT563063 ZNF28 zinc finger protein 28 2 2
MIRT564672 ZNF35 zinc finger protein 35 2 2
MIRT565971 RPP14 ribonuclease P/MRP subunit p14 2 4
MIRT567341 H3F3B H3 histone family member 3B 2 2
MIRT568194 CBX6 chromobox 6 2 2
MIRT568998 CBS cystathionine-beta-synthase 2 2
MIRT569344 EFHC1 EF-hand domain containing 1 2 2
MIRT571602 TOB2 transducer of ERBB2, 2 2 2
MIRT574245 NARS asparaginyl-tRNA synthetase 2 2
MIRT576509 Slc35e2 solute carrier family 35, member E2 2 2
MIRT576752 Tmem127 transmembrane protein 127 2 2
MIRT612558 RBM28 RNA binding motif protein 28 2 4
MIRT612723 NOL4 nucleolar protein 4 2 2
MIRT616403 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT618204 C22orf39 chromosome 22 open reading frame 39 2 2
MIRT619586 OCLN occludin 2 2
MIRT620109 HARBI1 harbinger transposase derived 1 2 2
MIRT621186 FAM153B family with sequence similarity 153 member B 2 2
MIRT624058 EIF4E eukaryotic translation initiation factor 4E 2 2
MIRT625015 TMIGD2 transmembrane and immunoglobulin domain containing 2 2 2
MIRT626072 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT628881 MED16 mediator complex subunit 16 2 2
MIRT629863 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630141 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT630443 IDE insulin degrading enzyme 2 2
MIRT630998 ZNF573 zinc finger protein 573 2 2
MIRT631035 ZNF878 zinc finger protein 878 2 2
MIRT631092 UQCRB ubiquinol-cytochrome c reductase binding protein 2 2
MIRT631281 SGSM1 small G protein signaling modulator 1 2 2
MIRT631498 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT631529 MYO6 myosin VI 2 2
MIRT631640 WDR91 WD repeat domain 91 2 4
MIRT632362 SRRD SRR1 domain containing 2 2
MIRT632777 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT633414 TMEM120B transmembrane protein 120B 2 2
MIRT633463 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT633591 ABRACL ABRA C-terminal like 2 2
MIRT633624 R3HDM2 R3H domain containing 2 2 2
MIRT634156 YME1L1 YME1 like 1 ATPase 2 2
MIRT634473 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 2
MIRT634484 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT638157 TMEM170B transmembrane protein 170B 2 2
MIRT638938 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT639578 AVL9 AVL9 cell migration associated 2 2
MIRT640063 KPNA6 karyopherin subunit alpha 6 2 2
MIRT640230 TOMM40 translocase of outer mitochondrial membrane 40 2 2
MIRT640303 PRR13 proline rich 13 2 2
MIRT640438 ERVMER34-1 endogenous retrovirus group MER34 member 1, envelope 2 2
MIRT641124 NPHP3 nephrocystin 3 2 2
MIRT642311 FPR1 formyl peptide receptor 1 2 2
MIRT644312 NFKBID NFKB inhibitor delta 2 2
MIRT645735 POLR3A RNA polymerase III subunit A 2 2
MIRT648056 TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit 2 2
MIRT648941 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 2 2
MIRT649190 DNPEP aspartyl aminopeptidase 2 2
MIRT649288 NEK8 NIMA related kinase 8 2 2
MIRT650007 KLB klotho beta 2 2
MIRT650363 RRP36 ribosomal RNA processing 36 2 2
MIRT650566 YIPF4 Yip1 domain family member 4 2 2
MIRT651496 WT1 Wilms tumor 1 2 2
MIRT651789 UTP6 UTP6, small subunit processome component 2 2
MIRT652110 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT654281 RCAN3 RCAN family member 3 2 2
MIRT655300 PEAR1 platelet endothelial aggregation receptor 1 2 2
MIRT655366 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT655677 NUMBL NUMB like, endocytic adaptor protein 2 2
MIRT657759 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT657831 GJD3 gap junction protein delta 3 2 2
MIRT659114 DENND6A DENN domain containing 6A 2 2
MIRT659410 CORO2A coronin 2A 2 2
MIRT659832 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT663260 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 2 2
MIRT663588 C10orf32 BLOC-1 related complex subunit 7 2 2
MIRT663757 ZNF285 zinc finger protein 285 2 2
MIRT664534 EXOG exo/endonuclease G 2 2
MIRT666192 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT667021 PDF peptide deformylase, mitochondrial 2 2
MIRT668406 FAM63B MINDY lysine 48 deubiquitinase 2 2 2
MIRT669756 ZNF101 zinc finger protein 101 2 2
MIRT669797 GAN gigaxonin 2 2
MIRT669923 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT670003 GPR156 G protein-coupled receptor 156 2 4
MIRT670297 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670386 EMP2 epithelial membrane protein 2 2 2
MIRT670567 GLTP glycolipid transfer protein 2 2
MIRT670866 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT671058 KIF1B kinesin family member 1B 2 2
MIRT671081 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT671094 DNAJC3 DnaJ heat shock protein family (Hsp40) member C3 2 2
MIRT671248 TMEM41B transmembrane protein 41B 2 2
MIRT671304 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT671592 KLHL21 kelch like family member 21 2 2
MIRT671768 PLA2G4A phospholipase A2 group IVA 2 2
MIRT671804 WISP3 WNT1 inducible signaling pathway protein 3 2 2
MIRT671823 TRPM6 transient receptor potential cation channel subfamily M member 6 2 2
MIRT671855 APOL2 apolipoprotein L2 2 2
MIRT671955 SPPL3 signal peptide peptidase like 3 2 2
MIRT671992 OSTF1 osteoclast stimulating factor 1 2 2
MIRT672091 WDR5B WD repeat domain 5B 2 2
MIRT672123 ATP6V0A2 ATPase H+ transporting V0 subunit a2 2 2
MIRT672169 FANCF Fanconi anemia complementation group F 2 2
MIRT672270 SHE Src homology 2 domain containing E 2 2
MIRT672314 CD3D CD3d molecule 2 2
MIRT672341 SLC25A34 solute carrier family 25 member 34 2 2
MIRT672446 TTPAL alpha tocopherol transfer protein like 2 2
MIRT672457 POU2F3 POU class 2 homeobox 3 2 2
MIRT672730 NETO2 neuropilin and tolloid like 2 2 2
MIRT672995 NOL9 nucleolar protein 9 2 2
MIRT673041 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT673428 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT673650 CYCS cytochrome c, somatic 2 2
MIRT673688 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT673818 DARS aspartyl-tRNA synthetase 2 2
MIRT673979 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT674053 ATXN3 ataxin 3 2 2
MIRT674147 ZNF793 zinc finger protein 793 2 2
MIRT674245 NUP62 nucleoporin 62 2 2
MIRT674278 LMOD3 leiomodin 3 2 2
MIRT674321 POLR1B RNA polymerase I subunit B 2 2
MIRT674396 MYCBP MYC binding protein 2 2
MIRT674434 MIOX myo-inositol oxygenase 2 4
MIRT674475 BCL2L15 BCL2 like 15 2 2
MIRT674499 TIRAP TIR domain containing adaptor protein 2 2
MIRT674554 GREB1 growth regulation by estrogen in breast cancer 1 2 2
MIRT674573 KIF3A kinesin family member 3A 2 2
MIRT674751 SLC16A1 solute carrier family 16 member 1 2 2
MIRT674863 GINM1 glycoprotein integral membrane 1 2 2
MIRT674877 IPO9 importin 9 2 2
MIRT674975 SH3BP2 SH3 domain binding protein 2 2 2
MIRT675220 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT675715 EMC3 ER membrane protein complex subunit 3 2 2
MIRT675977 FAM126B family with sequence similarity 126 member B 2 2
MIRT676238 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT676741 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT677182 ZNF786 zinc finger protein 786 2 2
MIRT677427 DDX19B DEAD-box helicase 19B 2 2
MIRT677461 PDLIM3 PDZ and LIM domain 3 2 2
MIRT677580 TRIM65 tripartite motif containing 65 2 2
MIRT677643 HAUS2 HAUS augmin like complex subunit 2 2 2
MIRT677716 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT677829 TSPYL1 TSPY like 1 2 2
MIRT678597 ARPC2 actin related protein 2/3 complex subunit 2 2 2
MIRT678941 MYADM myeloid associated differentiation marker 2 2
MIRT679220 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT679449 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 4
MIRT679758 TLR6 toll like receptor 6 2 2
MIRT682790 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT683067 NUP205 nucleoporin 205 2 2
MIRT683560 SMIM12 small integral membrane protein 12 2 2
MIRT685502 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT686413 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT688533 DCAF7 DDB1 and CUL4 associated factor 7 2 2
MIRT689617 AKAP6 A-kinase anchoring protein 6 2 2
MIRT689669 RBM23 RNA binding motif protein 23 2 2
MIRT689822 HIST1H2BJ histone cluster 1 H2B family member j 2 2
MIRT691061 CRCP CGRP receptor component 2 2
MIRT691445 CXorf36 chromosome X open reading frame 36 2 2
MIRT691545 FLYWCH2 FLYWCH family member 2 2 2
MIRT692633 SUSD1 sushi domain containing 1 2 2
MIRT693862 IYD iodotyrosine deiodinase 2 2
MIRT693975 ZNF70 zinc finger protein 70 2 2
MIRT694144 CYP27C1 cytochrome P450 family 27 subfamily C member 1 2 2
MIRT695543 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT696018 TYRO3 TYRO3 protein tyrosine kinase 2 2
MIRT696311 NIP7 NIP7, nucleolar pre-rRNA processing protein 2 2
MIRT696399 CORO7 coronin 7 2 2
MIRT698137 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT698755 STK4 serine/threonine kinase 4 2 2
MIRT702557 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT702762 IGF1R insulin like growth factor 1 receptor 2 2
MIRT703555 FKBP14 FK506 binding protein 14 2 2
MIRT708063 LIX1L limb and CNS expressed 1 like 2 2
MIRT708363 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 2
MIRT711756 CCDC59 coiled-coil domain containing 59 2 2
MIRT714265 LTBP2 latent transforming growth factor beta binding protein 2 2 2
MIRT716497 ZNF394 zinc finger protein 394 2 2
MIRT716812 FGG fibrinogen gamma chain 2 2
MIRT718857 LRSAM1 leucine rich repeat and sterile alpha motif containing 1 2 2
MIRT719663 DMRT2 doublesex and mab-3 related transcription factor 2 2 2
MIRT719881 NECAB3 N-terminal EF-hand calcium binding protein 3 2 2
MIRT720436 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT721034 TRIM67 tripartite motif containing 67 2 2
MIRT725619 CAMKV CaM kinase like vesicle associated 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4755-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-4755-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-4755-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4755-3p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-miR-4755-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4755-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (100 ng/ml)

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