miRTarBase - #MIRT466712


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pre-miRNA Information
pre-miRNA hsa-mir-379   
Genomic Coordinates chr14: 101022066 - 101022132
Synonyms MIRN379, hsa-mir-379, MIR379
Description Homo sapiens miR-379 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-379-5p
Sequence 6| UGGUAGACUAUGGAACGUAGG |26
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 5 14 + 101022075 16594986, 18684997, 21912681, 22499667, 24964909, 25692236, 26449202, 27229138, 28411194, 28550310, 29267965, 20591823, 27587585, 30022565, 29976955, 31682236, 29165639, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1316049475 1 dbSNP
rs775428399 3 dbSNP
rs61991156 7 dbSNP
rs748621194 16 dbSNP
rs72631818 17 dbSNP
rs750490770 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SYNJ2BP   
Synonyms ARIP2, OMP25
Description synaptojanin 2 binding protein
Transcript NM_018373   
Expression
Putative miRNA Targets on SYNJ2BP
3'UTR of SYNJ2BP
(miRNA target sites are highlighted)		 
>SYNJ2BP|NM_018373|3'UTR
   1 AAAACTTGCTCTCTTTCAATACTCCCAATGAAGATACATTTCACTCACCCTCCACCCCTGCTATTCTGCCATGTCTTTCC
  81 CTCTCTCTGCATAGCCAGATTTGAAGTGACTGATACCCACCCCAAACCTTGCTGTTCACAGTCTCCAATTCTTCATATTC
 161 TAATGGGAAAGTAAAGGTATTGTTTGAAGGAAAACTGAAGAAAAGACTTGGCTTAGAACAAATGAGGAGTTATATATTTT
 241 ACTAGGACTTTTGATAGAAATTCAGCTACAACCCAAAGAGAGAAAGATTGAGTCTTCCTGTCACCATAGGCAATACCTTT
 321 TTTCTTAGCTGGCATGCCATAAAGGCCAGCTATGTGATATTAGAGGAAGAAAGGATTTTTCTTTTTAATGATCTTCCTTG
 401 GGAAATTATTGTGGCCTTTATTTAATTTCTAACTACGTACCTGGGTGCCTATATCGACAAAGAGTGAGAAGAGCATTTTT
 481 ACTTTTTTAAAAAAGCAAATACATATATACACATACGTATGCAAATATTATAGTATAATAGTGATCCCTATGGAGAATTA
 561 AAGGTGAGAAAGCTACTTTGTGGTGTCTAGGTTTCTGATAAAAGGGATGATCTTAACTGAAGAATTTAAAGAGATACTTA
 641 AACAGAGCAAATGTAGTAGGAACAAGGGAGTGAGCCTTATAAGAGGACGTTCAGTCTCATTTATTAAAATAATAACTGAG
 721 ACTGGGAGAGGTGGCTCATGCCTGTAAATCCCAGCACTTTGGTAGCCTGAAGTGGGAGATTGCTTGAGTCCAGGAGACCA
 801 GCCTGGGCAACATAGCAAAACCTCATCTCTATTTAAAAAAAAAATAGAAAAAAATGTAATAACTGAAGCAACTAATTAAA
 881 AATCTTAGAAGAACAATATTTATTCTTATAACAGCCAACTATGGTGAGTTATTATAAGGTAAATTGCCATAATCCAGCGC
 961 TGCTCACATCTAAAAAACTTTGAGGTGTAAAGGTAAATCGTACCAATCTCTGGGCTGCCCTAGTGACTTTTTTGATACCT
1041 CAGAGTCCTATTGAAGAACCAGGTGGAATGATTGTGGTAAGGGCTATAGTGCTGGAGCCAAACACCCCAGCAAGAAAACT
1121 CTAAAAGGACAAAAGATAAGGTAGTGCCTCCAAGGTGGCACCTGAACCCTCTCAGGCTACTTTTTGGTTTCTACTAACAA
1201 ACCTGAGGGAAGGAACTGCCTCCCTGGCAGGATGGGCATCAAATCAACTCTGGCTTCAGATTTAGTTAAAATGAGGCCGG
1281 GTGCAGCGGCTCACACCTGTCATCTCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACAAGGTCAGGAGTTCAAGACCAG
1361 CCTGGCCAACATGGTGAAACCCCATGTCTACTGAAAATACAAAAATTACCTGGACATGGTGGCGCGTTCCTGTAATTCCA
1441 GCTACTCAGGAGGCTGAGGCAGGAGAACTGTTTGAACCAGGACCTGGGAGACGGAGGTTGCAGTGAGCCAAGATCACGCC
1521 ACTGCACTCCAGCCTGGGCTACAGAGCAAGACTCCATCTCAAAAAAAGAAAGGCATGGATTGCTAGTATTTTTGAAAGGC
1601 TTTATACACTACATACGGCTTTTAATAAACCTTTTTGCAGCAAGAGGGAGGAAAAGAGTTTTGTTTGCTTTAGGAGGTAG
1681 GGAAATGTGGTAGGTGTTTCATGCGGCCTAGGAGGAGGATATGAATGAATGGATACTATGGAATGCCAGTGATCTCGATA
1761 AGGTGGGAACCATCCTGTTCATGTTCTTTTAAGGCTGGTTTTAAGCACTATGGGTAGCTGAATTTTCTGGCTTTAAGAAA
1841 ATCATTTCCATTAGCCAAATATATTGGCCATACTATAGGCCTTTTATAATTTTGTTAGCAAGATTATCAGGACTCAGGCA
1921 ATCAACTGTATTTCATTTCTAGCTTGGACAGTCTGGTAATTAAATGTTGATTGGACATCAGCTTTGTCAAGACACTTTTA
2001 CAAAGAAGTACAGTGCATATCCTCCATCCCATAGGGCTTTTGGGTTCCAACTGCGAAGACAACACTCTTATTGGCCACAT
2081 AGGTAGGACAGTGTAAGTAGGGGTCATGTTTATATTACAGACAGCAAAAGAGAAAAGTTACTGAGAACTGGGGCGTTTGA
2161 GAAAGTTACGTGGAGGAAAGGGACAAGTTGAAGACCCTTAAGGGCCTCACAGCCTAGTTAAGAGAATTCATAAACAGGTG
2241 AGAAGTTAAAAGTATATCAGCAGGCTAAGTATTGAAAACAATATTAAAGGGGTACCATGCAAAACACGATGCAGCAACAA
2321 AGAAGATATGCAGGTAATCATCACATTTTCTTTTAGAAATTCAGGGAAAAAAAGATGTCACATAATGGCATCAGGCTCAA
2401 TTGGAAAGGGAAGGCTTTTGAAAATAAGAGGTCCGGTAAGACCTTGCCTCTGGGTCACTACTGGTATAGGGAGAAACTTG
2481 CTTTAAACAGTCCTGACATAAAGTGCCTTTTGACATCAACTATTCAATACCTTTGAGACTCACTTAGACAACTGGACTCA
2561 TTGTAGGTTCCACAGAAAAACACGGACAACATTCTAGTTGTCACTCCAACCAGCCACACTAGGAGGGCACAGCCTCTGGT
2641 ACCCTTTCTGTTCCTGAAGGCATGTACAGCGGCTTCTACAGCAAGCTTGCTTACCTCCCAGGATTCACCTCATGGTTTGG
2721 ACACTGATTCCTGAGAGAGCCTTGAGACACACAAAGTGAAAAAAATGTCAAGCAGGAATGAAAGCTCTAGTTTTTTGCTT
2801 GTTGGTATATGTAAATTTGTTTAAAAAGTATCCATTCTGTCGTTGGTAGAAGTTTTGCTTTGGTTGATAATAGAGATTCT
2881 GATGTACTCTTATAACTTAGGTTTTCTCAGAAATTAAGTAGCATTGAAGATCAATGTAATACAGTTTTAAGCAGGTACAC
2961 TAATTATATTATTGATTCTATAGAAAACTAAAATTATAGATGAGGTATCAGGATCCATTATAGGTTGTAAAAAAATTCAT
3041 GTTCTTCATAGATTGAGTCTAATATTTCTTCTATAGATTGCATCTAATGTTCCTACTACCTAAATTATTACGTTCAAAGT
3121 TTTGAAAATTGAACGAAGGTATTTTTAAGTACTTAAAACATTTCTCTATCATTCTGTATTACATGTATAATTATAAGATA
3201 TTGTTTGCTTCAACTAGCTGTACTTTGTTTTCCTGTGAAGTTTCAACTTATGTGTTATCGATTTAACTTAATTGTTCCAT
3281 CTAGCCATGTATAATGGAAAAAGGAAGTTAATATTTGTTATTGTGTTCTATGCCAGGGACTGTACCAAACTCTGATTGGT
3361 ACATTATTTCATGTCTCATAACTCTGGGATCTAAGTATTGTCACAAAGAGACTAAAAATGAGAGAAAAAATTACTTGACT
3441 AGGATTATGTAGGTGGTAATAATAGAATCAGGATTTAAACTCAGGACTTCAGATGCCAGCATCAATGATATTCTCTCACT
3521 GGAAGTGGTTCTCAAAGCAAGGTCCTGACAAAAGCATCAGCGTTACTGGGGAACTTGTTAGAAAAGCAAGTTCATAGGCT
3601 GGGCATGGTGGCTCATGCCTGTAATCCCAGCACTCTAGGAGGCCTAGGCAGGTGGGTCACTTGAGCTCAGGAGTTTTGAG
3681 ACCAGCCTGCACAATGTGGTGAAACCCTGTCTTTACTAAAAGTCAAACAAATTAGTGGTGCATTCCTGTAGGCCCAGCTA
3761 CACGGGAGGATTGCTTGAGCCCAGGAGACTGAGGTGCAGTGAGCCGTGATTGCTCCACTTCATTCTAGCCTGAGCAACGG
3841 AGTGAGACCTTGTCTCAAAAACAAAAAAACAAACAAACAAAAAACAAAAAGCAAGTTCCCAGAAGAGAAAAAAGAAGTTC
3921 CAGACCTAGTGAATCAAAAACTCTGAGCGTGGCATCTCACAATCTGTGTTTTTGTAATCCTTCCAGGTGACTGATTCATG
4001 CTAAAGTTTGAGACTCATTGCTCTATGCCAGTCATCATTCCCTTTGCTCAGGTTAGAATCATCTGGAGAGCTTATAAACG
4081 TCCCCATGCCCAGGCTGCACACAGATCAATTAAAAGGAACCTCTGAGGGTGGGACTCAAGCAGCAGTAAAATAAAGTTCA
4161 TTGAGTGATTCTGGTGTGCAGCCGCAGTTGAAAATGTTATATAGCATTTAAACAAGACACTATTTAATTAAACACTATTT
4241 AAATTATTAAATTACATACATTGCTTCAGGCAAAACAACAACAACAACAACAACAACAAAAACTTGGGCCTTTAGAGCCC
4321 AGCTTCCTGAGCTTCTGCACGAAGTAAGTGGAACATTCATTTCTTCCTGATTTGCTAAGGATTGATCAACCTCCAGCAAA
4401 ATGTATGATTAGTGAGTGTTTCAGTTGGTGCATCAATTAAATGAGAACCAATCATAGAACATTGAAGCTAAAAAGGACCA
4481 GAGAGCTTCTAGGATGAATCTGTCTTAGAGATGAGAAAAATAAAGGCTCAGAGAGGGAAGCTAACTTAACTCTGATCAGA
4561 CTTAGTTTGTTGCAGAAGTGACCTTTCTGTCTCATATTTATGTCTTGAATATATTCACTACATGAATACACAGACTACCC
4641 ATTTTATCTTAGTCTACTTCTTTCTTCTCTCTTTGGGCCTGAATAAAGACCAGAACTGATAGACAGCTAAAGGATATTGC
4721 AAGCATCATTATTGGAATTGGGAGATTCCACAGAACAATCTGAGAATGATCTCATATCAAATCCAATCAGATGAGTTATT
4801 CTGAGACTAATTCCAATAGTTCTAGAGACTTTTTTTTTTATGGTGGACATTGTTTTTATTGTGTAAATAAGCAATTTTTA
4881 AAGTATATTTAAAGAAATGAAACATAAGGAAGTGTATAGGCTGTCAGGTATGTGGGGAAGTGAAGTTCATGTAGTTTTCA
4961 TGTGGAGCCCATACAGATTTTATTATAGTCAATTTTAGTGAAATTTATCGTTGGTCAGATGAAGGTTTTTTTCCTTCATT
5041 CAGCAAATAACTAATGACTGCCTACTATGTGCTAGGTGCCGAAGATAGAGAGATAAATAACACTTAGTCACTCTAAGCTG
5121 AAATTGCTCAGCATATGAAAGTGGAGGAATATTTGTAGGTGATTTTGATGTTAAAGTATTTTTTTAACATCACCTGGTAG
5201 TAGAAGATTGAGTTATGAAGCTGTCTACCTCTCACCTGTAATAGTTTTAGAGTTGGTTGCTATTTTGGTGTAAGTCTTTT
5281 TTGCTGTTCCTCTTTTAACTGCAAATCTTTTTGAGACCAGCACTCACATCCAAAAGGGCAATTGTGATAAAAAAGAAGAC
5361 AGTATTTTAAGGATTCTGATCAGAACCAGATTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTC
5441 TTGCTCTGTCGCCTAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAATCTCTGCCGCCCGGGTTCAAGCGATTCT
5521 CCTGCCTCAGCCTCCCCAGTAGTTGGGATTACAGGTGTGTGCCACAACGCCTGGCTAATTTTTGTATTTTTAGTAGACAC
5601 GGGGTTTCAGCATCTTGGCCAGGCTGGTCTTGAATTCCTGACCTCGTGATCCACCCATCTCGGCCTCCCAAAGTGCAGAA
5681 CCAGATTCTTAACTGCCACAGACTCTTGTATTATGTAATTTATATACAGAACACAAAGCACTTGATTTGCTTAACTGATG
5761 TACTTGATGATACTATAAAACCTATATTATGAGAAAGCATTGCTCCTTCAAAGGAATCAAGTGATAGCAAACACTCGGTC
5841 CTGTTTCCAGGTTTTCCTCACTGTTCATTTTGCCTTTGTTCTTGCAGGGGGAGAATGAAAGGGGCGAGAGCTAAAGTGTG
5921 TTGTCAATGCAAGTCAATCCTTAACCAACAATAATTTACAAAAGAACTTTATATTTGCTGTAATCATTAAATTTAGTTAC
6001 TAATCCCAGGAAAAGGGTTAGTCCTTCCTCCTAGTTTGTAGATTTGCAAATGGAGATGAATAATTGAATCCTATTTTAAT
6081 CTTTTATCTGCAGTAATCTGGGCTTCTTATTACCGGATATATTTGCATTTTACCTCCAGGCCATGTTAGTTCTTAGAAGA
6161 TTATTTTCCTCATGAACCCTGTTTTGTTTTGCTTCCTTTCTGCTTCAATTCTAATGTCACATTGCATACCTGGATGTAAA
6241 CAGCAGTCAGTTTCTCAGATCAAATAGAGCCCTGTAGCAACTTGGAAGACACAGAAGACACACGGACATAAAACTGTATT
6321 TATTATCCAGGGAATGTCACTACGGATTAATTATGTTAATGAGGCCATCAAAATCTATGGTAATCTTTCAGGCTTTGTTG
6401 TTTGATACCAGATACAGCAAATGAGATAATAATGTGTCTAATTGTGCCTAGCCAGTATTGGTATTTAATAAAACTTTGTC
6481 ATTGAATCTTTACAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggAUGCAAGGUAU---CAGAUGGu 5'
            |: ||| :: |   ||||||| 
Target 5' atTGAGTTATGAAGCTGTCTACCt 3'
 5207 - 5230 147.00 -11.70
2 
miRNA  3' ggaUGCAA-GGUAUCAGAUGGu 5'
             |: || :| ||||||||: 
Target 5' cccATTTTATCTTAGTCTACTt 3'
 4638 - 4659 142.00 -11.20
3 
miRNA  3' ggaugcaaGGUAUCAGAUGGu 5'
                  |||| ||||||: 
Target 5' gtgaaaccCCAT-GTCTACTg 3'
 1374 - 1393 136.00 -11.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30471309 42 COSMIC
COSN30523828 57 COSMIC
COSN30112657 58 COSMIC
COSN13593865 94 COSMIC
COSN30456690 96 COSMIC
COSN30457273 103 COSMIC
COSN30451815 127 COSMIC
COSN30486047 134 COSMIC
COSN30101943 151 COSMIC
COSN30515639 163 COSMIC
COSN31560520 177 COSMIC
COSN31557763 205 COSMIC
COSN31661425 222 COSMIC
COSN28048732 233 COSMIC
COSN26507566 242 COSMIC
COSN23014676 319 COSMIC
COSN30541869 331 COSMIC
COSN16127917 374 COSMIC
COSN25708284 460 COSMIC
COSN31518454 488 COSMIC
COSN31582444 622 COSMIC
COSN1658306 771 COSMIC
COSN5389570 950 COSMIC
COSN31894083 1060 COSMIC
COSN8849021 1131 COSMIC
COSN27938833 1242 COSMIC
COSN8156541 1278 COSMIC
COSN30312412 1623 COSMIC
COSN1658305 2648 COSMIC
COSN23507703 3112 COSMIC
COSN31959639 3254 COSMIC
COSN2501652 3353 COSMIC
COSN1170612 3607 COSMIC
COSN20111435 4274 COSMIC
COSN2378146 4279 COSMIC
COSN20092856 4416 COSMIC
COSN15238659 4474 COSMIC
COSN17033935 4816 COSMIC
COSN14852157 4827 COSMIC
COSN23388180 4830 COSMIC
COSN20111434 4904 COSMIC
COSN4758749 5204 COSMIC
COSN20272283 5276 COSMIC
COSN20092855 5398 COSMIC
COSN2527459 5568 COSMIC
COSN25056301 6146 COSMIC
COSN22795327 6163 COSMIC
COSN22575132 6171 COSMIC
COSN8387154 6194 COSMIC
COSN6257609 6397 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs776148557 1 dbSNP
rs74324732 5 dbSNP
rs1322115122 6 dbSNP
rs1274876451 8 dbSNP
rs376670851 9 dbSNP
rs774963810 13 dbSNP
rs202186250 19 dbSNP
rs749661485 21 dbSNP
rs780495617 24 dbSNP
rs992967152 25 dbSNP
rs769994749 26 dbSNP
rs1208634609 27 dbSNP
rs765442650 28 dbSNP
rs200172973 29 dbSNP
rs924282007 29 dbSNP
rs1405349533 32 dbSNP
rs1284884334 33 dbSNP
rs376773956 35 dbSNP
rs751538982 37 dbSNP
rs768653306 37 dbSNP
rs1348317687 39 dbSNP
rs777672691 42 dbSNP
rs1238664666 43 dbSNP
rs1356136466 46 dbSNP
rs1314922353 47 dbSNP
rs968310279 49 dbSNP
rs765083835 56 dbSNP
rs3742917 57 dbSNP
rs1224261573 66 dbSNP
rs3742916 73 dbSNP
rs985656786 79 dbSNP
rs1197877114 81 dbSNP
rs1274190989 83 dbSNP
rs1256011300 85 dbSNP
rs1249240343 89 dbSNP
rs1481129776 97 dbSNP
rs1199516100 98 dbSNP
rs1376943333 104 dbSNP
rs1197958668 122 dbSNP
rs370826694 123 dbSNP
rs534722972 123 dbSNP
rs1396902953 125 dbSNP
rs1409206893 155 dbSNP
rs1290726356 162 dbSNP
rs1306387099 187 dbSNP
rs772016807 188 dbSNP
rs1230214789 201 dbSNP
rs949368927 202 dbSNP
rs1314785573 203 dbSNP
rs916583745 205 dbSNP
rs991514778 207 dbSNP
rs1230224872 224 dbSNP
rs374944316 229 dbSNP
rs1339128204 233 dbSNP
rs1329863637 234 dbSNP
rs3832974 242 dbSNP
rs1490742779 261 dbSNP
rs1222519684 279 dbSNP
rs1266089514 280 dbSNP
rs958304468 291 dbSNP
rs925467209 292 dbSNP
rs1166369202 298 dbSNP
rs1403242449 307 dbSNP
rs748003704 310 dbSNP
rs1166484681 312 dbSNP
rs774397758 315 dbSNP
rs1425572362 317 dbSNP
rs11844845 319 dbSNP
rs1441263433 330 dbSNP
rs1008598766 335 dbSNP
rs1012773338 345 dbSNP
rs1326363359 349 dbSNP
rs143254959 352 dbSNP
rs572988633 359 dbSNP
rs1361100427 363 dbSNP
rs149132579 373 dbSNP
rs1177897349 375 dbSNP
rs1264542097 377 dbSNP
rs1056934731 382 dbSNP
rs934410492 387 dbSNP
rs1266092639 406 dbSNP
rs188537412 407 dbSNP
rs866199559 409 dbSNP
rs1291254592 411 dbSNP
rs954410604 414 dbSNP
rs1241195010 416 dbSNP
rs763179097 422 dbSNP
rs1042759404 433 dbSNP
rs1356262532 436 dbSNP
rs1028644465 437 dbSNP
rs1367011404 439 dbSNP
rs947023316 440 dbSNP
rs996518587 445 dbSNP
rs1388489030 447 dbSNP
rs1369003159 449 dbSNP
rs1339310921 451 dbSNP
rs1295806360 453 dbSNP
rs899097508 455 dbSNP
rs1311564672 473 dbSNP
rs1319557342 481 dbSNP
rs145114408 488 dbSNP
rs1260823598 498 dbSNP
rs1327913821 499 dbSNP
rs1206720442 502 dbSNP
rs1004725337 506 dbSNP
rs1461600395 515 dbSNP
rs1181077863 516 dbSNP
rs886235316 517 dbSNP
rs954271201 526 dbSNP
rs1159875673 528 dbSNP
rs1411286964 531 dbSNP
rs1455752771 535 dbSNP
rs1179188069 538 dbSNP
rs1407552905 542 dbSNP
rs1378224197 560 dbSNP
rs116337498 571 dbSNP
rs1301474519 575 dbSNP
rs1376454770 589 dbSNP
rs976906553 598 dbSNP
rs1392802599 599 dbSNP
rs1433695376 600 dbSNP
rs367667124 635 dbSNP
rs916614580 636 dbSNP
rs1226111189 641 dbSNP
rs1005536656 643 dbSNP
rs1324208331 645 dbSNP
rs1209105797 647 dbSNP
rs1254061951 648 dbSNP
rs748793091 664 dbSNP
rs1177972896 678 dbSNP
rs952694147 679 dbSNP
rs1268325800 680 dbSNP
rs1055115391 683 dbSNP
rs936644809 687 dbSNP
rs925572359 688 dbSNP
rs978716517 689 dbSNP
rs1284317748 708 dbSNP
rs1414421958 730 dbSNP
rs1174346941 731 dbSNP
rs1013240126 737 dbSNP
rs552828900 744 dbSNP
rs1313167963 751 dbSNP
rs1303991327 764 dbSNP
rs895697308 765 dbSNP
rs966888272 768 dbSNP
rs375483757 776 dbSNP
rs1369565009 783 dbSNP
rs1057381058 784 dbSNP
rs1287928646 788 dbSNP
rs1218011556 789 dbSNP
rs998672136 790 dbSNP
rs1368168306 792 dbSNP
rs912721481 792 dbSNP
rs866816657 801 dbSNP
rs987210309 802 dbSNP
rs1299162713 805 dbSNP
rs1042809883 810 dbSNP
rs947077061 812 dbSNP
rs954443230 835 dbSNP
rs1050060204 839 dbSNP
rs779439189 843 dbSNP
rs1053494 845 dbSNP
rs1269731871 845 dbSNP
rs201897094 845 dbSNP
rs922854294 846 dbSNP
rs1168367140 848 dbSNP
rs1389121940 855 dbSNP
rs977338100 855 dbSNP
rs995866909 856 dbSNP
rs1349931445 864 dbSNP
rs1435198481 875 dbSNP
rs1291708959 891 dbSNP
rs140303366 893 dbSNP
rs1016183102 894 dbSNP
rs773204373 894 dbSNP
rs554674559 896 dbSNP
rs1004802850 905 dbSNP
rs1466306425 908 dbSNP
rs908655992 909 dbSNP
rs984165625 912 dbSNP
rs886308773 916 dbSNP
rs1173834380 921 dbSNP
rs1024803739 923 dbSNP
rs1486494703 924 dbSNP
rs1188286497 934 dbSNP
rs1012898149 946 dbSNP
rs1446875548 948 dbSNP
rs1013702913 955 dbSNP
rs536037049 958 dbSNP
rs745534822 959 dbSNP
rs781569275 960 dbSNP
rs1204798725 968 dbSNP
rs903016916 973 dbSNP
rs1483759566 974 dbSNP
rs1021419343 977 dbSNP
rs1454439332 978 dbSNP
rs562594991 981 dbSNP
rs1284934842 982 dbSNP
rs184595318 987 dbSNP
rs903815078 999 dbSNP
rs1042679206 1000 dbSNP
rs745445237 1013 dbSNP
rs751991268 1014 dbSNP
rs1050532514 1015 dbSNP
rs921733309 1031 dbSNP
rs550761975 1060 dbSNP
rs1188678730 1065 dbSNP
rs532527803 1084 dbSNP
rs986945451 1086 dbSNP
rs1472273954 1097 dbSNP
rs1179569189 1099 dbSNP
rs1409490754 1100 dbSNP
rs932791053 1103 dbSNP
rs1219859305 1119 dbSNP
rs1386368393 1121 dbSNP
rs1337790241 1123 dbSNP
rs1470800732 1123 dbSNP
rs1334596010 1130 dbSNP
rs1340059029 1141 dbSNP
rs147811371 1144 dbSNP
rs974858715 1146 dbSNP
rs963117643 1147 dbSNP
rs1281541867 1159 dbSNP
rs1016337334 1160 dbSNP
rs1351172655 1168 dbSNP
rs1396293279 1176 dbSNP
rs747944711 1182 dbSNP
rs546056911 1192 dbSNP
rs776148350 1215 dbSNP
rs908705821 1219 dbSNP
rs984217930 1222 dbSNP
rs74065325 1224 dbSNP
rs915969813 1228 dbSNP
rs758920335 1235 dbSNP
rs1024874353 1237 dbSNP
rs1013439330 1242 dbSNP
rs1253600227 1247 dbSNP
rs1469227815 1248 dbSNP
rs1472595826 1261 dbSNP
rs1180845552 1263 dbSNP
rs991929612 1266 dbSNP
rs894939801 1271 dbSNP
rs1033773658 1278 dbSNP
rs1401212330 1279 dbSNP
rs144404105 1287 dbSNP
rs1371402884 1288 dbSNP
rs140439111 1292 dbSNP
rs967253630 1319 dbSNP
rs1021471750 1322 dbSNP
rs1042351521 1323 dbSNP
rs1274824856 1325 dbSNP
rs147161181 1326 dbSNP
rs891388329 1330 dbSNP
rs1276264960 1344 dbSNP
rs1028727998 1346 dbSNP
rs1203763037 1349 dbSNP
rs1051251462 1350 dbSNP
rs997614645 1367 dbSNP
rs1199476978 1371 dbSNP
rs1377070165 1379 dbSNP
rs932822387 1380 dbSNP
rs1182201659 1385 dbSNP
rs921428067 1398 dbSNP
rs1429380186 1400 dbSNP
rs1306447105 1401 dbSNP
rs556255355 1422 dbSNP
rs901505588 1423 dbSNP
rs974554608 1423 dbSNP
rs941764610 1424 dbSNP
rs1041725902 1425 dbSNP
rs571539815 1426 dbSNP
rs112312649 1439 dbSNP
rs1315481562 1444 dbSNP
rs887339692 1448 dbSNP
rs1245056283 1449 dbSNP
rs1227187628 1452 dbSNP
rs950334698 1465 dbSNP
rs1048559945 1468 dbSNP
rs1024905405 1474 dbSNP
rs1489174200 1480 dbSNP
rs1209922008 1481 dbSNP
rs1266511085 1483 dbSNP
rs1449813475 1487 dbSNP
rs992038823 1492 dbSNP
rs1248376306 1493 dbSNP
rs1448697528 1507 dbSNP
rs916006538 1510 dbSNP
rs1370487152 1513 dbSNP
rs959275964 1517 dbSNP
rs576772837 1518 dbSNP
rs559017639 1523 dbSNP
rs534520845 1525 dbSNP
rs1389155310 1533 dbSNP
rs566792938 1546 dbSNP
rs759756936 1547 dbSNP
rs1333242765 1552 dbSNP
rs1000979830 1554 dbSNP
rs968556070 1560 dbSNP
rs1464034125 1561 dbSNP
rs776693856 1562 dbSNP
rs1020965603 1566 dbSNP
rs563809214 1568 dbSNP
rs891085502 1572 dbSNP
rs1051326298 1573 dbSNP
rs1294866042 1585 dbSNP
rs928660753 1604 dbSNP
rs1244816269 1607 dbSNP
rs1264378029 1608 dbSNP
rs1353690201 1609 dbSNP
rs113940572 1611 dbSNP
rs1210488832 1613 dbSNP
rs1268757297 1616 dbSNP
rs997501799 1616 dbSNP
rs61977541 1617 dbSNP
rs1038927927 1623 dbSNP
rs1424649681 1630 dbSNP
rs1187155292 1654 dbSNP
rs1366774825 1661 dbSNP
rs1458941284 1670 dbSNP
rs192255958 1673 dbSNP
rs1388560004 1674 dbSNP
rs774346304 1677 dbSNP
rs1304980717 1679 dbSNP
rs1444336928 1684 dbSNP
rs1047479822 1687 dbSNP
rs1380832192 1696 dbSNP
rs928959007 1704 dbSNP
rs990010081 1705 dbSNP
rs917588174 1707 dbSNP
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rs1209849600 1709 dbSNP
rs1328421281 1711 dbSNP
rs1206545098 1717 dbSNP
rs1357865909 1718 dbSNP
rs1289079159 1721 dbSNP
rs1483484043 1727 dbSNP
rs997266060 1738 dbSNP
rs966149929 1740 dbSNP
rs1473577937 1741 dbSNP
rs1014593473 1742 dbSNP
rs992104308 1756 dbSNP
rs959533064 1757 dbSNP
rs1471912201 1774 dbSNP
rs768653659 1775 dbSNP
rs1311244501 1780 dbSNP
rs887391799 1790 dbSNP
rs1465903642 1795 dbSNP
rs1301890361 1803 dbSNP
rs1373243301 1810 dbSNP
rs1411066946 1814 dbSNP
rs1288463930 1837 dbSNP
rs189115932 1844 dbSNP
rs1444458730 1849 dbSNP
rs1335168906 1854 dbSNP
rs1303396113 1856 dbSNP
rs926536454 1862 dbSNP
rs569049505 1875 dbSNP
rs1254430681 1878 dbSNP
rs371789738 1880 dbSNP
rs1048609979 1887 dbSNP
rs762800513 1894 dbSNP
rs995673587 1896 dbSNP
rs117225615 1898 dbSNP
rs967871757 1899 dbSNP
rs894636409 1904 dbSNP
rs1020995129 1909 dbSNP
rs1009603021 1915 dbSNP
rs955406933 1926 dbSNP
rs1431221113 1928 dbSNP
rs1308311959 1930 dbSNP
rs1381304222 1935 dbSNP
rs1160899372 1939 dbSNP
rs1259670481 1948 dbSNP
rs775022083 1954 dbSNP
rs1439480496 1956 dbSNP
rs938782679 1980 dbSNP
rs997134070 1983 dbSNP
rs1385967169 1987 dbSNP
rs900104391 1988 dbSNP
rs1301014662 1991 dbSNP
rs1344088825 1991 dbSNP
rs769207366 1993 dbSNP
rs1200228532 1995 dbSNP
rs1274259328 2008 dbSNP
rs142523656 2012 dbSNP
rs755361213 2014 dbSNP
rs1190022965 2016 dbSNP
rs183733430 2021 dbSNP
rs990062219 2023 dbSNP
rs745425604 2031 dbSNP
rs929033978 2036 dbSNP
rs921793614 2043 dbSNP
rs1407659225 2050 dbSNP
rs1166324888 2052 dbSNP
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rs1056551002 2064 dbSNP
rs1367074692 2065 dbSNP
rs527605967 2071 dbSNP
rs937663178 2074 dbSNP
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rs1221789167 2083 dbSNP
rs1014616922 2085 dbSNP
rs1290644366 2100 dbSNP
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rs1270650680 2119 dbSNP
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rs1262413575 5430 dbSNP
rs1263158739 5430 dbSNP
rs1278126980 5430 dbSNP
rs1291533537 5430 dbSNP
rs1291835773 5430 dbSNP
rs1321917428 5430 dbSNP
rs1338829103 5430 dbSNP
rs1364245338 5430 dbSNP
rs1401140316 5430 dbSNP
rs1436075094 5430 dbSNP
rs1486561902 5430 dbSNP
rs71448320 5430 dbSNP
rs1420396818 5431 dbSNP
rs1440068418 5431 dbSNP
rs1273734686 5432 dbSNP
rs1298076508 5434 dbSNP
rs1359223494 5439 dbSNP
rs569536278 5450 dbSNP
rs551325444 5451 dbSNP
rs1378983468 5454 dbSNP
rs915731383 5474 dbSNP
rs903792062 5475 dbSNP
rs1216744188 5477 dbSNP
rs565237495 5478 dbSNP
rs1420864524 5486 dbSNP
rs1044032917 5488 dbSNP
rs533481441 5491 dbSNP
rs1410243592 5493 dbSNP
rs1212222674 5496 dbSNP
rs1175484599 5500 dbSNP
rs181465620 5501 dbSNP
rs1180278256 5504 dbSNP
rs1031688179 5505 dbSNP
rs541684332 5514 dbSNP
rs1158096245 5518 dbSNP
rs1201902064 5528 dbSNP
rs189983865 5534 dbSNP
rs1265276379 5552 dbSNP
rs1358884796 5555 dbSNP
rs933756823 5556 dbSNP
rs1300671330 5559 dbSNP
rs1378616879 5563 dbSNP
rs1240484021 5564 dbSNP
rs966032169 5568 dbSNP
rs1220813120 5571 dbSNP
rs918323869 5578 dbSNP
rs1019654862 5600 dbSNP
rs1239824561 5601 dbSNP
rs1458368101 5604 dbSNP
rs1007803437 5608 dbSNP
rs972396263 5609 dbSNP
rs1378482538 5617 dbSNP
rs1455649203 5621 dbSNP
rs1173617744 5624 dbSNP
rs1425117134 5634 dbSNP
rs562189588 5644 dbSNP
rs142056950 5645 dbSNP
rs184611973 5646 dbSNP
rs1447055214 5654 dbSNP
rs139777210 5661 dbSNP
rs1023826720 5662 dbSNP
rs1438016354 5670 dbSNP
rs1284776540 5675 dbSNP
rs752526319 5678 dbSNP
rs939686612 5682 dbSNP
rs906858582 5687 dbSNP
rs1046088315 5698 dbSNP
rs1455154099 5707 dbSNP
rs1318420020 5708 dbSNP
rs1198181308 5713 dbSNP
rs146386783 5714 dbSNP
rs1453357498 5717 dbSNP
rs142166761 5726 dbSNP
rs1246250578 5732 dbSNP
rs1477317748 5742 dbSNP
rs1456737096 5757 dbSNP
rs1424704580 5763 dbSNP
rs1430120967 5773 dbSNP
rs140111698 5775 dbSNP
rs989954061 5784 dbSNP
rs1397714759 5790 dbSNP
rs1007220703 5797 dbSNP
rs1330063529 5804 dbSNP
rs1434210959 5825 dbSNP
rs889682670 5826 dbSNP
rs532994287 5830 dbSNP
rs1187415500 5836 dbSNP
rs76893222 5837 dbSNP
rs933807368 5838 dbSNP
rs1210724984 5844 dbSNP
rs371429424 5853 dbSNP
rs8014629 5857 dbSNP
rs149575641 5865 dbSNP
rs780229316 5868 dbSNP
rs953674495 5869 dbSNP
rs1191917852 5874 dbSNP
rs970055903 5887 dbSNP
rs1044527 5889 dbSNP
rs995013506 5890 dbSNP
rs1311177496 5892 dbSNP
rs1361050429 5893 dbSNP
rs897958339 5895 dbSNP
rs1350994233 5901 dbSNP
rs551096090 5905 dbSNP
rs1245710221 5906 dbSNP
rs1283835134 5912 dbSNP
rs1003951486 5913 dbSNP
rs1218929067 5917 dbSNP
rs1286881640 5925 dbSNP
rs906884386 5927 dbSNP
rs1258700949 5930 dbSNP
rs1443362201 5932 dbSNP
rs1045417649 5934 dbSNP
rs1367561179 5936 dbSNP
rs6573956 5940 dbSNP
rs894405244 5944 dbSNP
rs1006880036 5964 dbSNP
rs1054259851 5968 dbSNP
rs1404015051 5977 dbSNP
rs543030600 5990 dbSNP
rs1464621092 5993 dbSNP
rs1333706465 6000 dbSNP
rs935875438 6005 dbSNP
rs1171436271 6016 dbSNP
rs924440593 6017 dbSNP
rs1430635308 6024 dbSNP
rs566420032 6033 dbSNP
rs1353165606 6049 dbSNP
rs944791214 6056 dbSNP
rs1238530378 6059 dbSNP
rs1258304491 6060 dbSNP
rs911940923 6071 dbSNP
rs1200202214 6082 dbSNP
rs1254570377 6088 dbSNP
rs543335496 6097 dbSNP
rs1180194031 6105 dbSNP
rs1238182505 6109 dbSNP
rs548085011 6109 dbSNP
rs1044534 6114 dbSNP
rs1036788024 6115 dbSNP
rs752368782 6121 dbSNP
rs953327285 6123 dbSNP
rs1171757641 6132 dbSNP
rs1403714715 6133 dbSNP
rs562280961 6143 dbSNP
rs920850609 6146 dbSNP
rs1482654814 6153 dbSNP
rs1251485450 6159 dbSNP
rs1389773782 6161 dbSNP
rs754572579 6161 dbSNP
rs909603258 6168 dbSNP
rs973650412 6169 dbSNP
rs1044538 6171 dbSNP
rs180987174 6172 dbSNP
rs1305528061 6178 dbSNP
rs760095081 6180 dbSNP
rs754826715 6181 dbSNP
rs1246445169 6182 dbSNP
rs971182640 6190 dbSNP
rs188983076 6192 dbSNP
rs1384833197 6196 dbSNP
rs753757496 6202 dbSNP
rs1334639765 6205 dbSNP
rs1394325561 6213 dbSNP
rs1024440569 6222 dbSNP
rs1306922656 6228 dbSNP
rs1012585498 6263 dbSNP
rs960913342 6276 dbSNP
rs1463778325 6281 dbSNP
rs894143391 6288 dbSNP
rs1399791375 6292 dbSNP
rs545919027 6303 dbSNP
rs544853407 6304 dbSNP
rs1368481089 6318 dbSNP
rs1386637328 6325 dbSNP
rs1281945464 6333 dbSNP
rs1044541 6343 dbSNP
rs111717572 6344 dbSNP
rs1257865630 6355 dbSNP
rs968567733 6359 dbSNP
rs1202078126 6366 dbSNP
rs1266698106 6367 dbSNP
rs1488525838 6373 dbSNP
rs117184865 6377 dbSNP
rs1422696806 6386 dbSNP
rs1022362035 6390 dbSNP
rs1250673628 6400 dbSNP
rs367886059 6413 dbSNP
rs555296664 6417 dbSNP
rs954041104 6426 dbSNP
rs911989895 6432 dbSNP
rs1050904155 6433 dbSNP
rs1481907168 6437 dbSNP
rs192644468 6439 dbSNP
rs1301792581 6442 dbSNP
rs920578656 6447 dbSNP
rs576093837 6455 dbSNP
rs897056299 6461 dbSNP
rs375278723 6471 dbSNP
rs1314452233 6478 dbSNP
rs962306154 6488 dbSNP
rs908089022 6493 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ggaugcaagguauCAGAUGGu 5'
                       ||||||| 
Target 5' -----------cuGUCUACCu 3'
 		1 - 10
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HCT116
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in ERX177599. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_2_1 PAR-CLIP data was present in ERX177627. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_4_5 ...

- Krell J; Stebbing J; Carissimi C; Dabrowska et al., 2016, Genome research.

Article - Krell J; Stebbing J; Carissimi C; Dabrowska et al.
- Genome research, 2016
DNA damage activates TP53-regulated surveillance mechanisms that are crucial in suppressing tumorigenesis. TP53 orchestrates these responses directly by transcriptionally modulating genes, including microRNAs (miRNAs), and by regulating miRNA biogenesis through interacting with the DROSHA complex. However, whether the association between miRNAs and AGO2 is regulated following DNA damage is not yet known. Here, we show that, following DNA damage, TP53 interacts with AGO2 to induce or reduce AGO2's association of a subset of miRNAs, including multiple let-7 family members. Furthermore, we show that specific mutations in TP53 decrease rather than increase the association of let-7 family miRNAs, reducing their activity without preventing TP53 from interacting with AGO2. This is consistent with the oncogenic properties of these mutants. Using AGO2 RIP-seq and PAR-CLIP-seq, we show that the DNA damage-induced increase in binding of let-7 family members to the RISC complex is functional. We unambiguously determine the global miRNA-mRNA interaction networks involved in the DNA damage response, validating them through the identification of miRNA-target chimeras formed by endogenous ligation reactions. We find that the target complementary region of the let-7 seed tends to have highly fixed positions and more variable ones. Additionally, we observe that miRNAs, whose cellular abundance or differential association with AGO2 is regulated by TP53, are involved in an intricate network of regulatory feedback and feedforward circuits. TP53-mediated regulation of AGO2-miRNA interaction represents a new mechanism of miRNA regulation in carcinogenesis.
LinkOut: [PMID: 26701625]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000256366.4 | 3UTR | CUGUCUACCUCUCACCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE19536 Breast cancer 0.241 7.9e-3 0.291 1.7e-3 100 Click to see details
GSE28544 Breast cancer 0.485 8.1e-3 0.512 5.3e-3 24 Click to see details
GSE42095 Differentiated embryonic stem cells 0.459 1.4e-2 0.593 1.4e-3 23 Click to see details
GSE28260 Renal cortex and medulla 0.594 1.6e-2 0.593 1.6e-2 13 Click to see details
GSE19783 ER- ER- breast cancer 0.238 1.7e-2 0.285 5.5e-3 79 Click to see details
GSE19350 CNS germ cell tumors -0.454 6.9e-2 -0.357 1.3e-1 12 Click to see details
GSE17498 Multiple myeloma 0.224 8.2e-2 0.195 1.1e-1 40 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.219 1.5e-1 -0.442 1.3e-2 25 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.234 1.6e-1 0.268 1.3e-1 20 Click to see details
GSE21687 Ependynoma primary tumors 0.109 2.0e-1 0.050 3.5e-1 64 Click to see details
GSE14794 Lymphoblastoid cells -0.091 2.0e-1 -0.041 3.5e-1 90 Click to see details
GSE21849 B cell lymphoma -0.156 2.1e-1 -0.257 8.9e-2 29 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.169 2.1e-1 0.136 2.6e-1 25 Click to see details
GSE19783 ER+ ER+ breast cancer 0.185 2.2e-1 0.218 1.8e-1 20 Click to see details
GSE17306 Multiple myeloma -0.041 3.9e-1 0.031 4.2e-1 49 Click to see details
GSE26953 Aortic valvular endothelial cells 0.048 4.1e-1 -0.188 1.9e-1 24 Click to see details
GSE27834 Pluripotent stem cells 0.052 4.2e-1 0.132 3.1e-1 16 Click to see details
GSE38226 Liver fibrosis -0.044 4.2e-1 -0.189 2.1e-1 21 Click to see details
GSE21032 Prostate cancer -0.016 4.4e-1 -0.048 3.3e-1 83 Click to see details
GSE32688 Pancreatic cancer -0.021 4.5e-1 0.033 4.3e-1 32 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.053 4.8e-1 0.500 3.3e-1 3 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.616 0 0.565 0 42 Click to see details
BLCA -0.742 0 -0.684 0 18 Click to see details
STAD -0.475 0 -0.485 0 32 Click to see details
KICH -0.51 0 -0.228 0.14 25 Click to see details
KIRC -0.31 0.01 -0.246 0.02 68 Click to see details
LIHC -0.328 0.01 -0.299 0.02 49 Click to see details
UCEC -0.46 0.02 -0.304 0.1 19 Click to see details
KIRP -0.338 0.03 -0.270 0.07 32 Click to see details
BRCA 0.164 0.07 0.086 0.22 84 Click to see details
COAD -0.446 0.13 -0.381 0.18 8 Click to see details
LUSC -0.122 0.23 -0.164 0.16 38 Click to see details
CHOL -0.278 0.23 -0.167 0.33 9 Click to see details
PRAD -0.063 0.33 -0.018 0.45 50 Click to see details
LUAD -0.12 0.36 -0.098 0.38 12 Click to see details
THCA 0.046 0.36 0.069 0.3 59 Click to see details
CESC 0.299 0.4 0.500 0.33 3 Click to see details
PAAD 0.191 0.4 0.800 0.1 4 Click to see details
ESCA 0.026 0.47 -0.145 0.34 11 Click to see details
PCPG -1 0.5 -1.000 0.5 3 Click to see details
PCPG -1 0.5 -1.000 0.5 3 Click to see details
PCPG -1 0.5 -1.000 0.5 3 Click to see details
70 hsa-miR-379-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT007025 IL11 interleukin 11 1 1
MIRT068534 NHLRC3 NHL repeat containing 3 2 6
MIRT094166 PCGF3 polycomb group ring finger 3 2 6
MIRT100098 ABT1 activator of basal transcription 1 2 8
MIRT120926 PDE12 phosphodiesterase 12 2 8
MIRT179051 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 6
MIRT202043 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT215726 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT254608 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT266219 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT297447 SLC20A1 solute carrier family 20 member 1 2 4
MIRT315444 SLC16A10 solute carrier family 16 member 10 2 2
MIRT442137 C3orf17 nucleolus and neural progenitor protein 2 2
MIRT453878 IFRD1 interferon related developmental regulator 1 2 12
MIRT456258 TDRKH tudor and KH domain containing 2 12
MIRT456412 MTRF1L mitochondrial translational release factor 1 like 2 2
MIRT459729 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT461474 METTL1 methyltransferase like 1 2 2
MIRT463791 YBX1 Y-box binding protein 1 2 6
MIRT464031 WASL Wiskott-Aldrich syndrome like 2 2
MIRT464206 VGLL4 vestigial like family member 4 2 2
MIRT466712 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT467957 SLC16A1 solute carrier family 16 member 1 2 4
MIRT469224 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT473958 LRRC58 leucine rich repeat containing 58 2 2
MIRT475309 IFNLR1 interferon lambda receptor 1 2 2
MIRT476945 FAM83G family with sequence similarity 83 member G 2 4
MIRT477747 EDN1 endothelin 1 2 2
MIRT478260 DDX19B DEAD-box helicase 19B 2 2
MIRT478680 CSRP2 cysteine and glycine rich protein 2 2 4
MIRT490255 HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2 2
MIRT493289 LNPEP leucyl and cystinyl aminopeptidase 2 2
MIRT493564 HSPA5 heat shock protein family A (Hsp70) member 5 2 2
MIRT495960 TBC1D19 TBC1 domain family member 19 2 2
MIRT497106 BEST3 bestrophin 3 2 2
MIRT498348 CISD1 CDGSH iron sulfur domain 1 2 2
MIRT500783 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 8
MIRT501091 SLC5A6 solute carrier family 5 member 6 2 4
MIRT505309 TPD52 tumor protein D52 2 2
MIRT511107 NFIB nuclear factor I B 2 4
MIRT512737 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT514269 ZNF519 zinc finger protein 519 2 2
MIRT514602 NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 2 4
MIRT515378 RPL7 ribosomal protein L7 2 2
MIRT518564 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT520459 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT529765 SF3B1 splicing factor 3b subunit 1 2 2
MIRT538005 DNAL1 dynein axonemal light chain 1 2 2
MIRT538250 CUL3 cullin 3 2 4
MIRT543777 RBM12B RNA binding motif protein 12B 2 4
MIRT546203 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT547201 PARP1 poly(ADP-ribose) polymerase 1 2 2
MIRT548440 ELMOD2 ELMO domain containing 2 2 2
MIRT551634 TRUB1 TruB pseudouridine synthase family member 1 2 4
MIRT553334 TSC22D2 TSC22 domain family member 2 2 2
MIRT556169 MCC mutated in colorectal cancers 2 2
MIRT557968 FAM222B family with sequence similarity 222 member B 2 2
MIRT560021 TM2D2 TM2 domain containing 2 2 2
MIRT560716 ZNF749 zinc finger protein 749 2 2
MIRT564114 ZYG11B zyg-11 family member B, cell cycle regulator 2 4
MIRT564374 MRPS18B mitochondrial ribosomal protein S18B 2 2
MIRT566935 LIN28B lin-28 homolog B 5 2
MIRT573340 TUBD1 tubulin delta 1 2 2
MIRT607186 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT698515 TGFBR1 transforming growth factor beta receptor 1 2 2
MIRT704039 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT714582 PRRC1 proline rich coiled-coil 1 2 2
MIRT732163 PTK2 protein tyrosine kinase 2 3 1
MIRT732827 LINC00665 long intergenic non-protein coding RNA 665 3 0
MIRT735832 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 1 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-379 Vorinostat (SAHA) approved 5311 Microarray A549 human non-small cell lung cancer cells 19513533 2009 up-regulated
miR-379 1,2,6-Tri-O-galloyl-beta-D-glucopyranose NULL NULL Microarray HepG2 hepatocarcinoma cells. 22506400 2011 up-regulated
miR-379 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miR-379 Reversine NULL 210332 Microarray C2C12 myoblast cells 24513286 2014 up-regulated
miR-379 Rifampicin approved 5381226 TaqMan low-density array hepatocellular carcinoma HepG2 cells 21540293 2011 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-379 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-379 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-379-5p (1Z)-2-anilino-N-[(5-carbamoyl-1H-imidazol-4-yl)amino]-2-oxoethanimidoyl cyanide 5466279 NSC683605 resistant
hsa-miR-379-5p (2e)-2-hydroxyimino-4-(3-methyl-4-oxido-1-oxoquinoxalin-1-ium-2-yl)-4-oxo-n-(2,4,5-trichlorophenyl)butanamide 6399319 NSC635544 resistant
hsa-miR-379-5p (2E,5Z)-2-[(5-acetyl-4-methyl-1,3-thiazol-2-yl)hydrazinylidene]-5-[(2-methoxyphenyl)methylidene]-1,3-thiazolidin-4-one 135472679 NSC658292 sensitive
hsa-miR-379-5p (2R)-2-(1H-benzimidazol-2-yl)-2-(2-chloro-6-methylpyrimidin-4-yl)acetonitrile 390694 NSC688326 resistant
hsa-miR-379-5p (2r,6r)-9,11-dibromo-10-thia-3,5-diazatricyclo[6.3.0.02,6]undeca-1(11),8-diene-4,7-dione 400215 NSC711733 resistant
hsa-miR-379-5p (2S,6S,7S,12R)-16-bromo-9-tert-butyl-4-phenyl-4,20-diazapentacyclo[11.7.0.02,6.07,12.014,19]icosa-1(13),14(19),15,17-tetraene-3,5-dione 372657 NSC648154 sensitive
hsa-miR-379-5p (3-(trifluoromethyl)anilino)(2-(trifluoromethyl)phenyl)acetonitrile 375079 NSC654017 resistant
hsa-miR-379-5p (3e)-3-[(6-methylimidazo[2,1-b]thiazol-5-yl)methylene]-1,3-dihydro-2h-indol-2-one 10755270 NSC726902 resistant
hsa-miR-379-5p (3e)-4-chloro-3-[(6-chloro-2-methylimidazo[2,1-b][1,3]thiazol-5-yl)methylidene]-1h-indol-2-one 5471424 NSC711079 sensitive
hsa-miR-379-5p (4-chlorophenyl)-[5-(2,4-dichloro-5-fluorophenyl)-5-hydroxy-3-(4-methoxyphenyl)-4h-pyrazol-1-yl]methanone 400818 NSC713324 resistant
hsa-miR-379-5p (4-chlorophenyl) 2-(5-chloro-2-methylanilino)-6-(trifluoromethyl)pyridine-3-carboxylate 24204990 NSC733906 sensitive
hsa-miR-379-5p (4-chlorophenyl) 3-methyl-5-nitroimidazole-4-sulfonate 236063 NSC38086 resistant
hsa-miR-379-5p (4E)-2-(2-hydroxybenzoyl)-5-methyl-4-[(4-nitrophenyl)methylidene]pyrazol-3-one 5467414 NSC652175 sensitive
hsa-miR-379-5p (4e,12z,27z,43z)-hexatetraconta-4,12,27,43-tetraen-1,18,21,45-tetrayne-3,20-diol 5470605 NSC703544 resistant
hsa-miR-379-5p (5e)-5-[(3,4-dimethoxyphenyl)methylidene]-3-phenyl-2-propylimino-1,3-thiazolidin-4-one 5471348 NSC710598 sensitive
hsa-miR-379-5p (7E)-6-(methoxymethoxy)-2-methylcyclododec-7-en-3-yn-1-one 5467712 NSC658114 resistant
hsa-miR-379-5p (E)-3-(3-chlorophenyl)-N-[2-[(1,1-dioxothian-4-yl)-methylamino]-2-oxoethyl]prop-2-enamide 51003603 NSC761184 resistant
hsa-miR-379-5p (e)-phenyl(2-pyridinyl)methanone (6-chloro-4-pyrimidinyl)hydrazone 9571636 NSC693248 resistant
hsa-miR-379-5p (NE)-N-[(6E)-2-[(hydroxyamino)-(4-phenylmethoxyphenyl)methyl]-6-[(4-phenylmethoxyphenyl)methylidene]cyclohexylidene]hydroxylamine 5928828 NSC632824 resistant
hsa-miR-379-5p [(1h-benzimidazole-2-yl)dithio]-9h-purine 54613148 NSC750485 resistant
hsa-miR-379-5p [(4S,5R,6S)-4-[(3,4-dimethoxyphenyl)methyl]-6-(2,2-diphenylcyclopentyl)oxy-4-ethyl-2-oxido-5,6-dihydrooxazin-2-ium-5-yl] benzoate 395287 NSC699767 resistant
hsa-miR-379-5p [(5R,6S)-4-cyclohexyl-6-(2,2-diphenylcyclopentyl)oxy-2-oxido-5,6-dihydro-4H-oxazin-2-ium-5-yl] acetate 395278 NSC699756 resistant
hsa-miR-379-5p [(6z)-1-thiacyclodec-6-en-3,8-diyn-5-yl] 9,10-dioxoanthracene-2-carboxylate 5468578 NSC671898 sensitive
hsa-miR-379-5p [(6Z,10Z)-6,10-dimethyl-3-methylidene-2-oxo-3a,4,5,8,9,11a-hexahydrocyclodeca[b]furan-4-yl] (Z)-4-hydroxy-2-(hydroxymethyl)but-2-enoate 6477984 NSC659936 resistant
hsa-miR-379-5p [(8R,10S,13R)-7,12-diacetyloxy-17-[5,5-bis(4-chlorophenyl)pent-4-en-2-yl]-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-yl] acetate 376380 NSC657282 sensitive
hsa-miR-379-5p [(E)-1-chlorobutylideneamino] N-[4-(trifluoromethoxy)phenyl]carbamate 5466270 NSC682840 resistant
hsa-miR-379-5p [(E)-1-chloropropylideneamino] N-[2-(trifluoromethoxy)phenyl]carbamate 5466266 NSC682836 resistant
hsa-miR-379-5p [(Z)-(1-chloro-2-methylpropylidene)amino] N-(4-bromophenyl)carbamate 9556248 NSC682825 resistant
hsa-miR-379-5p [1-[(e)-(5-nitrofuran-2-yl)methylideneamino]benzimidazol-2-yl]methanol 9572565 NSC720255 resistant
hsa-miR-379-5p [1-[[[2-amino-6-chloro-5-[(4-chlorophenyl)diazenyl]pyrimidin-4-yl]amino]methyl]-3-phenylmethoxycyclobutyl]methanol 385284 NSC676395 resistant
hsa-miR-379-5p [3,4,5-triacetyloxy-6-(3-cyano-6-phenyl-2-sulfanyl-4-thiophen-2-yl-4h-pyridin-1-yl)oxan-2-yl]methyl acetate 381303 NSC667740 sensitive
hsa-miR-379-5p [3,4,5-triacetyloxy-6-[(e)-2-(azidomethyl)-3-oxobut-1-enoxy]oxan-2-yl]methyl acetate 5471355 NSC710716 resistant
hsa-miR-379-5p [3,4,5-triacetyloxy-6-[6-(4-chlorophenyl)-3-cyano-2-sulfanylidenepyridin-1-yl]oxan-2-yl]methyl acetate 386296 NSC678057 sensitive
hsa-miR-379-5p [4-[(4-bromophenyl)carbamothioyl]phenyl] n-(4-chlorophenyl)carbamate 5471250 NSC710003 resistant
hsa-miR-379-5p [5-(5-fluoro-2,4-dioxopyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methyl [5-[5-fluoro-4-(octadecylamino)-2-oxopyrimidin-1-yl]-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate 390213 NSC687370 sensitive
hsa-miR-379-5p [5-[[2-chloroethyl(nitroso)carbamoyl]amino]-3-hydroxy-2-(hydroxymethyl)-6-methoxyoxan-4-yl] tetradecanoate 370169 NSC642913 sensitive
hsa-miR-379-5p [acetyl-[5-(trityloxymethyl)spiro[3a,5,6,6a-tetrahydrofuro[2,3-d][1,3]dioxole-2,1'-cyclopentane]-6-yl]amino] acetate 374290 NSC651809 sensitive
hsa-miR-379-5p 1-(2-methoxyphenyl)-3-[(z)-1-(2-pyridyl)ethylideneamino]thiourea 5367237 NSC668297 resistant
hsa-miR-379-5p 1-(9-methoxy-11,12-dihydro-6h-indolo[1,2-b][2]benzazepin-13-yl)ethanone 365697 NSC633551 sensitive
hsa-miR-379-5p 1-[(4-bromophenyl)amino]cyclopentanecarbonitrile 238637 NSC43101 resistant
hsa-miR-379-5p 1-[(E)-[phenyl(pyridin-2-yl)methylidene]amino]-3-(2-pyridin-2-ylethyl)thiourea 9571616 NSC689531 resistant
hsa-miR-379-5p 1-[1-(3,4-dimethoxyphenyl)-5-ethyl-7,8-dimethoxy-4-methyl-2,3-benzodiazepin-3-yl]ethanone 343249 NSC382585 resistant
hsa-miR-379-5p 1-[3-[4-(7-chloroquinolin-4-yl)oxy-3-methoxyphenyl]-5-(4-methylphenyl)-3,4-dihydropyrazol-2-yl]ethanone 155808269 NSC762557 sensitive
hsa-miR-379-5p 1-[5-[[[4-chlorobutyl(methyl)amino]-[(5-nitrofuran-2-yl)methoxy]phosphoryl]oxymethyl]-2,5-dihydrofuran-2-yl]-5-methylpyrimidine-2,4-dione 404846 NSC721390 sensitive
hsa-miR-379-5p 1-benzyl-2-methyl-1-(2-phenylethyl)-4,5-dihydroimidazol-1-ium 413544 NSC49460 sensitive
hsa-miR-379-5p 1-cyclopentyl-3-[(Z)-1-pyridin-2-ylethylideneamino]thiourea 5468465 NSC670783 resistant
hsa-miR-379-5p 14,22-dioxa-6,30,36-triazahexacyclo[29.2.2.22,5.116,20.08,13.023,28]octatriaconta-1(34),2(38),3,5(37),6,8,10,12,16(36),17,19,23,25,27,29,31(35),32-heptadecaene 388224 NSC682817 sensitive
hsa-miR-379-5p 17-acetyl-15-benzyl-9,14-dihydroxy-16-methyl-15-azatetracyclo[8.7.0.01,14.03,8]heptadeca-3,5,7,9,12,16-hexaene-2,11-dione 24203201 NSC727113 resistant
hsa-miR-379-5p 17-acetyl-9,14-dihydroxy-16-methyl-15-(4-methylphenyl)-15-azatetracyclo[8.7.0.01,14.03,8]heptadeca-3,5,7,9,12,16-hexaene-2,11-dione 405612 NSC722982 resistant
hsa-miR-379-5p 2'-(4-chlorobenzoyl)-1'-(4-chlorophenyl)-1'-hydroxyspiro[1,3-dihydro-1-benzazepine-4,4'-cyclohexane]-2,5-dione 388188 NSC682756 sensitive
hsa-miR-379-5p 2-(1-anilino-4-methyl-5-phenylimidazol-2-yl)sulfanyl-n-[4-(4-methoxyphenyl)-1,3-thiazol-2-yl]acetamide 60148160 NSC753772 resistant
hsa-miR-379-5p 2-(2-(dimethylamino)ethylamino)naphthazarin 376950 NSC658145 resistant
hsa-miR-379-5p 2-(3,5-di-tert-butyl-4-methoxybenzyl)cyclopent-4-ene-1,3-dione 403662 NSC718730 resistant
hsa-miR-379-5p 2-(hydroxymethyl)-5-[6-(2-propan-2-ylidenehydrazinyl)purin-9-yl]oxolane-3,4-diol 60147745 NSC752330 resistant
hsa-miR-379-5p 2-[(1-anilino-4h-thiochromeno[3,4-d]imidazol-2-yl)sulfanyl]-n-[4-(4-chlorophenyl)-1,3-thiazol-2-yl]acetamide 60148157 NSC753769 sensitive
hsa-miR-379-5p 2-[[4-[methyl-[(2,4,7-triaminopteridin-6-yl)methyl]amino]benzoyl]amino]pentanedioic acid 387951 NSC682306 resistant
hsa-miR-379-5p 2-[2-(aziridin-1-yl)ethoxy]quinoline 268715 NSC109084 resistant
hsa-miR-379-5p 2-[2-[5-(ethoxycarbonylcarbamoyl)-3-methyl-2,4-dioxopyrimidin-1-yl]ethylsulfanyl]ethyl n-[6-[2-[2-[5-(ethoxycarbonylcarbamoyl)-3-methyl-2,4-dioxopyrimidin-1-yl]ethylsulfanyl]ethoxycarbonylamino]hexyl] 367630 NSC637505 sensitive
hsa-miR-379-5p 2-[2-methoxy-5-[(E)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenoxy]acetic acid 5934333 NSC643813 sensitive
hsa-miR-379-5p 2-azaadenine 5480214 NSC57048 resistant
hsa-miR-379-5p 2-hydroxy-3-[(8-hydroxyquinolin-7-yl)-(4-methoxyphenyl)methyl]-6-propan-2-ylcyclohepta-2,4,6-trien-1-one 361375 NSC624401 sensitive
hsa-miR-379-5p 2-hydroxy discorhabdin d 362391 NSC626161 resistant
hsa-miR-379-5p 2-methylellpticinium 21123185 NSC351710 sensitive
hsa-miR-379-5p 2-methylellpticinium 21123185 NSC351710 sensitive
hsa-miR-379-5p 2-methylolivacinium acetate 5458752 NSC336003 sensitive
hsa-miR-379-5p 2-n-methyl-6-oxaellipticinium acetate 10018975 NSC638788 sensitive
hsa-miR-379-5p 2-n-methyl-6-thiaellipticinum iodide 367888 NSC638066 sensitive
hsa-miR-379-5p 2-phenyl-6-((1-phenyl-1h-tetraazol-5-yl)oxy)-4h-chromen-4-one 386037 NSC677603 sensitive
hsa-miR-379-5p 2,4-dinitro-1-benzofuran 332391 NSC329127 resistant
hsa-miR-379-5p 2,5,11-trimethyl-9-phenoxy-6h-pyrido[4,3-b]carbazol-2-ium;acetate 10431819 NSC650269 sensitive
hsa-miR-379-5p 2,5,12-trimethyl-[1,4]benzodioxino[3,2-g]isoquinolin-2-ium acetate 388316 NSC683048 sensitive
hsa-miR-379-5p 2,9-dimethylellipticinium acetate 10472068 NSC639364 sensitive
hsa-miR-379-5p 3-(4-bromophenyl)-4-methyl-8-pyrrolidin-1-yl-8H-thieno[2,3-b]pyrrolizin-4-ium;iodide 388536 NSC683517 sensitive
hsa-miR-379-5p 3-(4-chlorophenyl)-2-(3,4,5-trimethoxyphenyl)-1,3-thiazolidin-4-one 396385 NSC702338 resistant
hsa-miR-379-5p 3-(hydroxymethyl)-5-(6-methylsulfanylpurin-9-yl)-1,4-dioxane-2,6-diol 269951 NSC111702 resistant
hsa-miR-379-5p 3-[(e)-1-(2-hydroxy-4-methoxy-phenyl)ethylideneamino]-1,1-dimethyl-thiourea 135493996 NSC689547 resistant
hsa-miR-379-5p 3-[(E)-3-(4-chlorophenyl)prop-2-enoyl]-2-hydroxycyclohepta-2,4,6-trien-1-one 5918418 NSC356777 resistant
hsa-miR-379-5p 3-[10-(3-cyanophenyl)-3,5,9,11-tetraoxo-4,10-diazatetracyclo[5.5.2.02,6.08,12]tetradec-13-en-4-yl]benzonitrile 365552 NSC633258 sensitive
hsa-miR-379-5p 3-bromo-4-(3,3-dimethyl-but-1-ynyl)-2(5h)-furanone 11413833 NSC726328 resistant
hsa-miR-379-5p 3-chloro-6-[(4-fluorophenoxy)methyl]-2-phenylquinoxaline 392817 NSC693773 sensitive
hsa-miR-379-5p 3-methoxy-1-[(2-methoxyphenyl)methyl]-5-nitroindazole 386342 NSC678125 sensitive
hsa-miR-379-5p 3-methyl-1-(4-nitrobenzoyl)-5-(2-phenylethyl)-2-[[4-tri(propan-2-yl)silyloxyphenyl]methyl]pyrrolidine-3-carbaldehyde 401723 NSC715453 sensitive
hsa-miR-379-5p 3-phenacyliden-5-brom-2-indolinon 5351299 NSC294961 resistant
hsa-miR-379-5p 3,3-bis(3-(trifluoromethyl)phenyl)naphtho[1,2-c]furan-1(3h)-one 362080 NSC625603 sensitive
hsa-miR-379-5p 3no2-2pyrid-so2-ph 371687 NSC646125 resistant
hsa-miR-379-5p 4-((3-chlorobenzyl)oxy)-n-hydroxybenzamide 392397 NSC692761 resistant
hsa-miR-379-5p 4-(4-methoxyphenyl)-16-methyl-9-phenyl-4,20-diazapentacyclo[11.7.0.02,6.07,12.014,19]icosa-1(13),14(19),15,17-tetraene-3,5-dione 390919 NSC689140 sensitive
hsa-miR-379-5p 4-(4-methoxyphenyl)-16-phenylmethoxy-9-propan-2-yl-4,20-diazapentacyclo[11.7.0.02,6.07,12.014,19]icosa-1(13),14(19),15,17-tetraene-3,5-dione 390917 NSC689138 sensitive
hsa-miR-379-5p 4-(bromomethyl)-2,2,5,5-tetramethyl-1-imidazolidinol 3-oxide 378673 NSC661470 resistant
hsa-miR-379-5p 4-[(5s,8ar)-5-(4-fluoroanilino)-5,5a,6,8,8a,9-hexahydro-[2]benzofuro[6,5-f][1,3]benzodioxol-9-yl]-2,6-dimethoxyphenol 378224 NSC660027 sensitive
hsa-miR-379-5p 4-[[(Z)-N-benzamido-C-[4-[bis(2-cyanoethyl)amino]-2-methylphenyl]carbonimidoyl]diazenyl]benzoic acid 135493923 NSC681974 sensitive
hsa-miR-379-5p 4-[2-(methylamino)-1-methylsulfanylethyl]benzene-1,2-diol 412349 NSC39215 resistant
hsa-miR-379-5p 4-[4-(diethylamino)phenyl]-2-(4-hydroxypiperidin-1-yl)-6-(3,4,5-trimethoxyphenyl)pyridine-3-carbonitrile 60148088 NSC753601 resistant
hsa-miR-379-5p 4-[4-[2,3-bis(hydroxymethyl)pyrrol-1-yl]butanoylamino]-n-[5-[[5-[3-(dimethylamino)propylcarbamoyl]-1-methylpyrrol-3-yl]carbamoyl]-1-methylpyrrol-3-yl]-1-methylpyrrole-2-carboxamide 384021 NSC673131 sensitive
hsa-miR-379-5p 4-methoxy-1,5-benzothiazepine-1,1-dioxide 358940 NSC619102 resistant
hsa-miR-379-5p 4-naphthalen-2-yl-2,4-dioxo-3-(3-oxo-1H-2-benzofuran-1-yl)-N-[3-(trifluoromethyl)phenyl]butanamide 369471 NSC641241 sensitive
hsa-miR-379-5p 4-pyridin-3-yl-2-(2,3,5-trichlorophenyl)-1,3-thiazole 24814783 NSC742842 resistant
hsa-miR-379-5p 4,10-bis(3-ethynylphenyl)-4,10-diazatetracyclo[5.5.2.02,6.08,12]tetradec-13-ene-3,5,9,11-tetrone 365547 NSC633253 sensitive
hsa-miR-379-5p 4,16-difluoro-8,11,20-trimethyl-8-aza-20-azoniapentacyclo[11.7.1.02,7.09,21.014,19]henicosa-1(20),2(7),3,5,9,11,13(21),14(19),15,17-decaene;methyl sulfate 9804187 NSC714187 sensitive
hsa-miR-379-5p 5-(3,5-dimethoxybenzyl)-2-hydroxy-5,11-dihydro-6h-benzo[b]carbazol-6-one 403878 NSC719411 resistant
hsa-miR-379-5p 5-chloro-N-[(E)-[phenyl(pyridin-2-yl)methylidene]amino]pyridin-2-amine 6519698 NSC693627 resistant
hsa-miR-379-5p 5-hydroxy-3,7-dimethoxy-3',4'-methylenedioxyflavone 5466137 NSC678102 sensitive
hsa-miR-379-5p 5-methoxy-17-nitroso-8,9,10,12-tetrazatetracyclo[8.7.0.02,7.011,16]heptadeca-1(17),2(7),3,5,8,11(16),12,14-octaene 54613484 NSC749292 resistant
hsa-miR-379-5p 5-methyl-2-{[(2)-3-phenylprop-2-enoyl]amino}benzamide 53329052 NSC748147 sensitive
hsa-miR-379-5p 5-methyl-2-thiophenecarbaldehyde (7-methoxy-4-methyl-2-quinolinyl)hydrazone 9556289 NSC683922 resistant
hsa-miR-379-5p 5,10-dihydroxy-1-(4-piperidin-1-ylbutyl)naphtho[2,3-f]indole-4,11-dione 406505 NSC724632 resistant
hsa-miR-379-5p 5,10-dihydroxy-3-[[4-(2-hydroxyethyl)piperazin-1-yl]methyl]-1H-naphtho[2,3-f]indole-4,11-dione;hydrochloride 135585401 NSC726442 resistant
hsa-miR-379-5p 5,11-dimethyl-2-[(pentanoyloxy)methyl]-6h-pyrido[4,3-b]carbazol-2-ium iodide 367409 NSC637130 sensitive
hsa-miR-379-5p 5,7-dichloro-3-[(2-nitrophenyl)diazenyl]-1H-indol-2-ol 3724036 NSC117187 sensitive
hsa-miR-379-5p 5.alpha.,25d-spirostan-3.beta.-ol glycoside NSC106557 sensitive
hsa-miR-379-5p 6-(2-(3-chlorophenyl)hydrazino)-2,4-pyrimidinediol 385879 NSC677279 resistant
hsa-miR-379-5p 6-(4-acetylanilino)-9-methoxyindeno[1,2-c]quinolin-11-one 24205210 NSC734628 sensitive
hsa-miR-379-5p 6-[2-(dimethylamino)ethyl]-13-(2-isothiocyanatoethyl)-6,13-diazatetracyclo[6.6.2.04,16.011,15]hexadeca-1(15),2,4(16),8,10-pentaene-5,7,12,14-tetrone 57327694 NSC757982 resistant
hsa-miR-379-5p 6-amino-1,3-dichloro-5,6-dihydrocyclopenta[c]thiophen-4-one 378800 NSC662120 resistant
hsa-miR-379-5p 6-amino-5-[(4-fluorophenyl)methyl]-7-(1-methylbenzimidazol-2-yl)pyrrolo[2,3-b]pyrazine-2,3-dicarbonitrile 1179229 NSC730035 resistant
hsa-miR-379-5p 6-aminotoyocamycin 300567 NSC175630 resistant
hsa-miR-379-5p 6-benzyl-3,8,9-trimethoxy-11-methyl-6,11-dihydro-5h-indeno[1,2-c]isoquinolin-5-one 373164 NSC649107 sensitive
hsa-miR-379-5p 6-bromosangivamycin 270853 NSC113943 resistant
hsa-miR-379-5p 6-butyl-12-methyl-5,6-dihydrobenzimidazolo[2,1-a]isoquinolin-7-ium-3,10-diol;6-butyl-12-methyl-5,6-dihydrobenzimidazolo[2,1-a]isoquinolin-12-ium-3,9-diol;diiodide 403475 NSC718370 sensitive
hsa-miR-379-5p 6-ethoxy-2-(hydroxymethyl)-2h-pyran-3(6h)-one 398342 NSC708062 resistant
hsa-miR-379-5p 7'-but-3-en-2-yl-7'-(3-phenylmethoxypropyl)spiro[1,3-dioxolane-2,2'-3,4,7a,8,9,10-hexahydro-1h-cyclopenta[i]indolizine]-6'-thione 361486 NSC624523 sensitive
hsa-miR-379-5p 8-(6-fluorohexyl)-3-methyl-1-phenyl-1,3,8-triazaspiro[4.5]decan-4-one;hydrochloride 380336 NSC665863 resistant
hsa-miR-379-5p 8-[3-(1,3-dioxolan-2-yl)-2-(4-fluorophenyl)propyl]-3-ethyl-1-phenyl-1,3,8-triazaspiro[4.5]decan-4-one;hydrochloride 380308 NSC665789 resistant
hsa-miR-379-5p 8-aminoadenosine 259812 NSC90394 resistant
hsa-miR-379-5p 8-azainosine 135443893 NSC130279 resistant
hsa-miR-379-5p 8-chloro-7-methyl-5,5-dioxo-n-phenyl-[1,2,4]triazolo[4,3-b][1,4,2]benzodithiazin-3-amine 400657 NSC713019 sensitive
hsa-miR-379-5p 8-chloro-7-methyl-n-(4-methylphenyl)-5,5-dioxo-[1,2,4]triazolo[4,3-b][1,4,2]benzodithiazin-3-amine 400656 NSC713018 sensitive
hsa-miR-379-5p 8-trichloromethyldihydroberberine 320713 NSC269192 sensitive
hsa-miR-379-5p 9-((2-chloroethyl)thio)acridine 395387 NSC699923 resistant
hsa-miR-379-5p 9-(benzylsulfinyl)-2,7-dimethoxyacridine 395397 NSC699933 resistant
hsa-miR-379-5p 9-chloro-12,13-dimethoxy-6-phenyl-2,10-diazatetracyclo[6.6.2.04,16.011,15]hexadeca-1(14),4(16),5,7,9,11(15),12-heptaen-3-one 5470922 NSC706236 resistant
hsa-miR-379-5p 9-ethoxy-2,5,11-trimethyl-6h-pyrido[4,3-b]carbazol-2-ium acetate 373614 NSC650263 sensitive
hsa-miR-379-5p 9-hydroxy-2-(.beta.-diethylaminoethyl)ellipticinium acetate 72034 NSC311152 sensitive
hsa-miR-379-5p 9-tert-butyl-4-(4-methoxyphenyl)-16-methyl-4,20-diazapentacyclo[11.7.0.02,6.07,12.014,19]icosa-1(13),14(19),15,17-tetraene-3,5-dione 376302 NSC657017 sensitive
hsa-miR-379-5p Ak136303 388306 NSC682996 resistant
hsa-miR-379-5p Allopurinol 2094 NSC1390 approved resistant
hsa-miR-379-5p Antibiotic x-14766a 434840 NSC359239 sensitive
hsa-miR-379-5p Ao-267/15176074 393944 NSC696916 resistant
hsa-miR-379-5p Bafilomycin antibiotic NSC381867 resistant
hsa-miR-379-5p Berberine iodide 72350 NSC150446 sensitive
hsa-miR-379-5p Bis(2-nitrophenyl)sulfilimine 371591 NSC645984 resistant
hsa-miR-379-5p Carboplatin 38904 NSC241240 approved sensitive
hsa-miR-379-5p Cgp 57380 11644425 NSC741567 resistant
hsa-miR-379-5p Chloroplatinum(1+);2-(4-methylpiperidin-1-yl)ethanethiolate;dihydrate 431390 NSC292596 resistant
hsa-miR-379-5p Chrysarobin 221502 NSC6152 sensitive
hsa-miR-379-5p Crotonosid 223996 NSC12161 resistant
hsa-miR-379-5p Destruxin b NSC236580 resistant
hsa-miR-379-5p Dezaguanine 55710 NSC261726 resistant
hsa-miR-379-5p Diaporthein b 54612739 NSC751295 resistant
hsa-miR-379-5p Diethyl (Z)-2-(2,4-dioxo-3-prop-2-ynylpyrimidin-1-yl)but-2-enedioate 5469884 NSC693983 resistant
hsa-miR-379-5p Diethyl 2-[[4-[[6-(trifluoromethyl)quinoxalin-2-yl]amino]benzoyl]amino]pentanedioate 384948 NSC675772 sensitive
hsa-miR-379-5p Ellipticine 3213 NSC71795 sensitive
hsa-miR-379-5p Ellipticine 3213 NSC71795 sensitive
hsa-miR-379-5p Elliptinium acetate 42722 NSC264137 sensitive
hsa-miR-379-5p Ethyl 16-(3,4-dimethoxyphenyl)-12,14-diphenyl-10-oxa-3,5,6,8,12,13-hexazatetracyclo[7.7.0.02,6.011,15]hexadeca-1(9),2,4,7,11(15),13-hexaene-4-carboxylate 391836 NSC691424 sensitive
hsa-miR-379-5p Ethyl 2-[4-(16-methyl-8-oxo-5-phenyl-2,3,4,7,16-pentazatetracyclo[7.7.0.02,6.010,15]hexadeca-1(9),3,5,10,12,14-hexaen-7-yl)butanoylamino]acetate 24205302 NSC734977 sensitive
hsa-miR-379-5p Ethyl 3,5-dinitro-2-(7H-purin-6-ylsulfanyl)benzoate 4331266 NSC244714 resistant
hsa-miR-379-5p Ethyl 7-(3,4-dihydro-2h-1,5-benzodioxepin-7-yl)-10-methylsulfanyl-2-thia-5,7,9,11-tetrazatricyclo[6.3.1.04,12]dodeca-1(11),3,8(12),9-tetraene-3-carboxylate 399951 NSC711103 sensitive
hsa-miR-379-5p Eupachlorin 5458217 NSC114567 resistant
hsa-miR-379-5p Euphorbia substance spr5 5459191 NSC640929 sensitive
hsa-miR-379-5p Granatomycin a 135476747 NSC355063 resistant
hsa-miR-379-5p Gw701427a 10276395 NSC756323 sensitive
hsa-miR-379-5p Haloprogin 3561 NSC100071 resistant
hsa-miR-379-5p Heteromine a 391982 NSC691767 sensitive
hsa-miR-379-5p Hsdb 8106 16129719 NSC676825 resistant
hsa-miR-379-5p Inosine, 6-thio-, 2',3',5'-tripentanoate 4208664 NSC77495 resistant
hsa-miR-379-5p Isobaccharin 5358646 NSC269760 sensitive
hsa-miR-379-5p Isobrucein a 322357 NSC279503 sensitive
hsa-miR-379-5p J3.522.543i 6163542 NSC113053 resistant
hsa-miR-379-5p Justicidin b 122805 NSC254665 resistant
hsa-miR-379-5p Kinetin riboside 3832 NSC120958 resistant
hsa-miR-379-5p Laurusin 135476719 NSC106486 resistant
hsa-miR-379-5p Litomycin 135460332 NSC77038 resistant
hsa-miR-379-5p Ls-94160 135408599 NSC52426 resistant
hsa-miR-379-5p Maxima isoflavone d 343081 NSC382028 sensitive
hsa-miR-379-5p Mefloquine hydrochloride 456309 NSC157387 resistant
hsa-miR-379-5p Methyl (3r)-3-[[(3r)-3-[[(3r)-3-[(2-methylpropan-2-yl)oxycarbonylamino]-5-methylsulfanylpentanoyl]amino]-5-methylsulfanylpentanoyl]amino]-5-methylsulfanylpentanoate 403118 NSC717705 sensitive
hsa-miR-379-5p Methyl (Z)-4-[(5-bromothiophen-2-yl)methylideneamino]-4,4-dicyanobut-2-enoate 5470186 NSC698282 resistant
hsa-miR-379-5p Methyl (Z)-4,4-dicyano-4-[(3-methoxyphenyl)methylideneamino]but-2-enoate 5470182 NSC698278 resistant
hsa-miR-379-5p Methyl 4-[3-(2-thienyl)quinoxalin-2-yl]oxybenzoate 388002 NSC682365 sensitive
hsa-miR-379-5p Methyl 6-[bis-(4-methylphenyl)sulfonylamino]-7-methoxy-12-oxo-3,13,23-triazahexacyclo[11.10.1.02,11.04,9.014,19.020,24]tetracosa-1(24),2(11),3,5,7,9,14,16,18,20,22-undecaene-22-carboxylate 45028276 NSC742036 sensitive
hsa-miR-379-5p Methyl ester prodigiosene 136040158 NSC753661 resistant
hsa-miR-379-5p Musennin 267361 NSC106554 sensitive
hsa-miR-379-5p N'-(cyano(4-hydroxyphenyl)methyl)-2-hydroxybenzohydrazide 375017 NSC653843 sensitive
hsa-miR-379-5p N'-chloro-4-[2-[2-[4-[(Z)-N'-chlorocarbamimidoyl]phenoxy]ethyl-(4-methylphenyl)sulfonylamino]ethoxy]benzenecarboximidamide 45028721 NSC743909 sensitive
hsa-miR-379-5p N-(1,3-benzothiazol-2-yl)-2-phenyl-7-(3,4,5-trimethoxyphenyl)pyrazolo[1,5-a]pyrimidine-5-carboxamide 71624130 NSC763635 sensitive
hsa-miR-379-5p N-(4-methylphenyl)-3-[3-(4-methylphenyl)imino-2-phenylinden-1-yl]sulfanyl-2-phenylinden-1-imine 389841 NSC686473 sensitive
hsa-miR-379-5p N-(6-methyl-1,3-benzothiazol-2-yl)-4-naphthalen-2-yl-2,4-dioxo-3-(3-oxo-1h-2-benzofuran-1-yl)butanamide 369455 NSC641225 sensitive
hsa-miR-379-5p N-[(e)-[(4-methoxyphenyl)-pyridin-2-ylmethylidene]amino]pyridin-2-amine 9630043 NSC693622 resistant
hsa-miR-379-5p N-[(e)-1-isoquinolin-3-ylethylideneamino]-1-methylbenzimidazol-2-amine 9572093 NSC703108 resistant
hsa-miR-379-5p N-[(e)-1-pyridin-2-ylethylideneamino]-[1,3]thiazolo[5,4-b]pyridin-2-amine 9572047 NSC693635 resistant
hsa-miR-379-5p N-[(e)-1-pyridin-2-ylethylideneamino]-5-(trifluoromethyl)-1,3-benzothiazol-2-amine 9572095 NSC703110 resistant
hsa-miR-379-5p N-[(e)-1-pyrimidin-2-ylethylideneamino]-1,3-benzothiazol-2-amine 9572048 NSC693636 resistant
hsa-miR-379-5p N-[(z)-[phenyl(pyridin-2-yl)methylidene]amino]quinoxalin-2-amine 5869744 NSC693626 resistant
hsa-miR-379-5p N-[[4-[10-[4-[[acetyl(2-phenylethyl)amino]-cyanomethyl]phenoxy]decoxy]phenyl]-cyanomethyl]-n-(2-phenylethyl)acetamide 387721 NSC681750 sensitive
hsa-miR-379-5p N-[2-(dimethylamino)ethyl]-4-(furo[3,2-c]quinolin-4-ylamino)benzamide 24204686 NSC732490 resistant
hsa-miR-379-5p N-[2-chloro-5-(trifluoromethyl)phenyl]-4-naphthalen-2-yl-2,4-dioxo-3-(3-oxo-1h-2-benzofuran-1-yl)butanamide 369469 NSC641239 sensitive
hsa-miR-379-5p N-[3-[(z)-n-methoxy-c-methylcarbonimidoyl]phenyl]-11h-indolo[3,2-c]quinolin-6-amine 9572585 NSC721041 resistant
hsa-miR-379-5p N-[dimethoxyphosphoryl(furan-2-yl)methyl]-4-[[4-[[dimethoxyphosphoryl(furan-2-yl)methyl]amino]phenyl]methyl]aniline 399251 NSC709928 sensitive
hsa-miR-379-5p N-benzyl-1-[10-[4-(benzylamino)-2-methylquinolin-1-ium-1-yl]decyl]-2-methylquinolin-1-ium-4-amine;perchlorate 387881 NSC682094 sensitive
hsa-miR-379-5p N,n-dimethyl-4-[(e)-2-(1-methyl-2,5-diphenylpyrazol-1-ium-3-yl)ethenyl]aniline;trifluoromethanesulfonate 5469868 NSC693576 sensitive
hsa-miR-379-5p Naphtho[1,2-b]quinolizinium, 9-methyl-, bromide 21144314 NSC77810 sensitive
hsa-miR-379-5p Naphtho[2,1-b]quinolizinium, 7-methyl- chloride 5351151 NSC28002 sensitive
hsa-miR-379-5p Nigericin 34230 NSC292567 sensitive
hsa-miR-379-5p NSC372474 NSC372474 resistant
hsa-miR-379-5p NSC631451 NSC631451 resistant
hsa-miR-379-5p NSC751830 NSC751830 resistant
hsa-miR-379-5p NSC755523 NSC755523 resistant
hsa-miR-379-5p Pan (van) 6825 NSC5332 resistant
hsa-miR-379-5p Paucin 282787 NSC136722 resistant
hsa-miR-379-5p Pectenotoxin ii 5468320 NSC668555 sensitive
hsa-miR-379-5p Phenoxathiin-2-ylmethyl carbamimidothioate;hydrochloride 392088 NSC691900 resistant