miRTarBase - #MIRT466954


—
pre-miRNA Information
pre-miRNA hsa-mir-7113   
Genomic Coordinates chr11: 68032864 - 68032922
Description Homo sapiens miR-7113 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-7113-5p
Sequence 2| UCCAGGGAGACAGUGUGUGAG |22
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs536888936 4 dbSNP
rs896404692 5 dbSNP
rs1431421326 7 dbSNP
rs746958707 11 dbSNP
rs756213920 13 dbSNP
rs1467018028 14 dbSNP
rs1168207815 21 dbSNP
Putative Targets

Gene Information
Gene Symbol STAT3   
Synonyms ADMIO, ADMIO1, APRF, HIES
Description signal transducer and activator of transcription 3
Transcript NM_213662   
Other Transcripts NM_139276 , NM_003150   
Expression
Putative miRNA Targets on STAT3
3'UTR of STAT3
(miRNA target sites are highlighted)		 
>STAT3|NM_213662|3'UTR
   1 TGGTGAAGGTGCTGAACCCTCAGCAGGAGGGCAGTTTGAGTCCCTCACCTTTGACATGGAGTTGACCTCGGAGTGCGCTA
  81 CCTCCCCCATGTGAGGAGCTGAGAACGGAAGCTGCAGAAAGATACGACTGAGGCGCCTACCTGCATTCTGCCACCCCTCA
 161 CACAGCCAAACCCCAGATCATCTGAAACTACTAACTTTGTGGTTCCAGATTTTTTTTAATCTCCTACTTCTGCTATCTTT
 241 GAGCAATCTGGGCACTTTTAAAAATAGAGAAATGAGTGAATGTGGGTGATCTGCTTTTATCTAAATGCAAATAAGGATGT
 321 GTTCTCTGAGACCCATGATCAGGGGATGTGGCGGGGGGTGGCTAGAGGGAGAAAAAGGAAATGTCTTGTGTTGTTTTGTT
 401 CCCCTGCCCTCCTTTCTCAGCAGCTTTTTGTTATTGTTGTTGTTGTTCTTAGACAAGTGCCTCCTGGTGCCTGCGGCATC
 481 CTTCTGCCTGTTTCTGTAAGCAAATGCCACAGGCCACCTATAGCTACATACTCCTGGCATTGCACTTTTTAACCTTGCTG
 561 ACATCCAAATAGAAGATAGGACTATCTAAGCCCTAGGTTTCTTTTTAAATTAAGAAATAATAACAATTAAAGGGCAAAAA
 641 ACACTGTATCAGCATAGCCTTTCTGTATTTAAGAAACTTAAGCAGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCAC
 721 TTTGGGAGGCCGAGGCGGATCATAAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAA
 801 AGTACAAAAAATTAGCTGGGTGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTG
 881 AACCTGAGAGGCGGAGGTTGCAGTGAGCCAAAATTGCACCACTGCACACTGCACTCCATCCTGGGCGACAGTCTGAGACT
 961 CTGTCTCAAAAAAAAAAAAAAAAAAAAGAAACTTCAGTTAACAGCCTCCTTGGTGCTTTAAGCATTCAGCTTCCTTCAGG
1041 CTGGTAATTTATATAATCCCTGAAACGGGCTTCAGGTCAAACCCTTAAGACATCTGAAGCTGCAACCTGGCCTTTGGTGT
1121 TGAAATAGGAAGGTTTAAGGAGAATCTAAGCATTTTAGACTTTTTTTTATAAATAGACTTATTTTCCTTTGTAATGTATT
1201 GGCCTTTTAGTGAGTAAGGCTGGGCAGAGGGTGCTTACAACCTTGACTCCCTTTCTCCCTGGACTTGATCTGCTGTTTCA
1281 GAGGCTAGGTTGTTTCTGTGGGTGCCTTATCAGGGCTGGGATACTTCTGATTCTGGCTTCCTTCCTGCCCCACCCTCCCG
1361 ACCCCAGTCCCCCTGATCCTGCTAGAGGCATGTCTCCTTGCGTGTCTAAAGGTCCCTCATCCTGTTTGTTTTAGGAATCC
1441 TGGTCTCAGGACCTCATGGAAGAAGAGGGGGAGAGAGTTACAGGTTGGACATGATGCACACTATGGGGCCCCAGCGACGT
1521 GTCTGGTTGAGCTCAGGGAATATGGTTCTTAGCCAGTTTCTTGGTGATATCCAGTGGCACTTGTAATGGCGTCTTCATTC
1601 AGTTCATGCAGGGCAAAGGCTTACTGATAAACTTGAGTCTGCCCTCGTATGAGGGTGTATACCTGGCCTCCCTCTGAGGC
1681 TGGTGACTCCTCCCTGCTGGGGCCCCACAGGTGAGGCAGAACAGCTAGAGGGCCTCCCCGCCTGCCCGCCTTGGCTGGCT
1761 AGCTCGCCTCTCCTGTGCGTATGGGAACACCTAGCACGTGCTGGATGGGCTGCCTCTGACTCAGAGGCATGGCCGGATTT
1841 GGCAACTCAAAACCACCTTGCCTCAGCTGATCAGAGTTTCTGTGGAATTCTGTTTGTTAAATCAAATTAGCTGGTCTCTG
1921 AATTAAGGGGGAGACGACCTTCTCTAAGATGAACAGGGTTCGCCCCAGTCCTCCTGCCTGGAGACAGTTGATGTGTCATG
2001 CAGAGCTCTTACTTCTCCAGCAACACTCTTCAGTACATAATAAGCTTAACTGATAAACAGAATATTTAGAAAGGTGAGAC
2081 TTGGGCTTACCATTGGGTTTAAATCATAGGGACCTAGGGCGAGGGTTCAGGGCTTCTCTGGAGCAGATATTGTCAAGTTC
2161 ATGGCCTTAGGTAGCATGTATCTGGTCTTAACTCTGATTGTAGCAAAAGTTCTGAGAGGAGCTGAGCCCTGTTGTGGCCC
2241 ATTAAAGAACAGGGTCCTCAGGCCCTGCCCGCTTCCTGTCCACTGCCCCCTCCCCATCCCCAGCCCAGCCGAGGGAATCC
2321 CGTGGGTTGCTTACCTACCTATAAGGTGGTTTATAAGCTGCTGTCCTGGCCACTGCATTCAAATTCCAATGTGTACTTCA
2401 TAGTGTAAAAATTTATATTATTGTGAGGTTTTTTGTCTTTTTTTTTTTTTTTTTTTTTTGGTATATTGCTGTATCTACTT
2481 TAACTTCCAGAAATAAACGTTATATAGGAACCGTAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gagUGUGUGACAGAGGGACCu 5'
             || | || ||||||||| 
Target 5' ttgACTCCCTTTCTCCCTGGa 3'
 1243 - 1263 166.00 -21.80
2 
miRNA  3' gagugugUGACAGAGGGACCu 5'
                 || | ||||:||| 
Target 5' tcagttaACAGCCTCCTTGGt 3'
 994 - 1014 138.00 -13.80
3 
miRNA  3' gaguguGUGACAGAGGGACCu 5'
                ||  | :||:|||| 
Target 5' agggttCAGGGCTTCTCTGGa 3'
 2122 - 2142 131.00 -14.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
636593 4 ClinVar
514074 9 ClinVar
677746 846 ClinVar
1055052 1040 ClinVar
378673 1050 ClinVar
515337 1057 ClinVar
760615 1064 ClinVar
754191 1065 ClinVar
1152705 1067 ClinVar
728516 1070 ClinVar
1045933 1072 ClinVar
889638 1113 ClinVar
889637 1247 ClinVar
323240 1293 ClinVar
323239 1342 ClinVar
323238 1347 ClinVar
323237 1436 ClinVar
888957 1484 ClinVar
323236 1664 ClinVar
323235 1666 ClinVar
888956 1676 ClinVar
888955 1689 ClinVar
888954 1690 ClinVar
323234 1728 ClinVar
323233 1751 ClinVar
323232 1812 ClinVar
323231 1976 ClinVar
323229 1977 ClinVar
323230 1977 ClinVar
892352 2093 ClinVar
892351 2164 ClinVar
323228 2207 ClinVar
323227 2278 ClinVar
323226 2348 ClinVar
323225 2352 ClinVar
323224 2398 ClinVar
323223 2407 ClinVar
323222 2465 ClinVar
323221 2497 ClinVar
323220 2579 ClinVar
323219 2599 ClinVar
891153 2727 ClinVar
323218 2753 ClinVar
323217 2755 ClinVar
323216 2757 ClinVar
323214 2932 ClinVar
323215 2932 ClinVar
323213 2935 ClinVar
890595 2973 ClinVar
323212 3013 ClinVar
888897 3052 ClinVar
323211 3084 ClinVar
323210 3226 ClinVar
323209 3229 ClinVar
323208 3337 ClinVar
323207 3423 ClinVar
323206 3426 ClinVar
323205 3427 ClinVar
COSM3188669 1 COSMIC
COSM6235941 16 COSMIC
COSN8356387 84 COSMIC
COSN26573092 99 COSMIC
COSN5027870 111 COSMIC
COSN5027869 115 COSMIC
COSN15663052 124 COSMIC
COSN26195461 233 COSMIC
COSN26671731 276 COSMIC
COSN31783501 319 COSMIC
COSN19700620 356 COSMIC
COSN18188250 799 COSMIC
COSN26441056 863 COSMIC
COSN26997199 967 COSMIC
COSN28891030 988 COSMIC
COSN26596153 995 COSMIC
COSM9038807 1057 COSMIC
COSM4066545 1058 COSMIC
COSM1659100 1064 COSMIC
COSM9546065 1065 COSMIC
COSM4479208 1072 COSMIC
COSM4905112 1074 COSMIC
COSM4828478 1081 COSMIC
COSN30535867 1094 COSMIC
COSN31593463 1095 COSMIC
COSN30463660 1109 COSMIC
COSN13722179 1113 COSMIC
COSN31526998 1159 COSMIC
COSN30473979 1160 COSMIC
COSN31592964 1197 COSMIC
COSN28838565 1198 COSMIC
COSN24229446 1289 COSMIC
COSN24230326 1304 COSMIC
COSN17981829 1347 COSMIC
COSN24231658 1542 COSMIC
COSN24229034 1574 COSMIC
COSN17647963 1769 COSMIC
COSN24229033 1779 COSMIC
COSN32061750 1975 COSMIC
COSN30542784 2056 COSMIC
COSN16923727 2202 COSMIC
COSN31547320 2221 COSMIC
COSN31487233 2299 COSMIC
COSN31491140 2390 COSMIC
COSN6548402 2407 COSMIC
COSN7166875 2429 COSMIC
COSN31532339 2473 COSMIC
COSN31540570 2520 COSMIC
COSN26573836 2579 COSMIC
COSN25138440 2595 COSMIC
COSN23345996 2724 COSMIC
COSN31540562 2735 COSMIC
COSN17496284 2935 COSMIC
COSN31487859 2949 COSMIC
COSN15660786 2996 COSMIC
COSN26570257 3097 COSMIC
COSN15321576 3383 COSMIC
COSN32064739 3423 COSMIC
COSN20113951 3425 COSMIC
COSN26576511 3448 COSMIC
COSN26575355 3472 COSMIC
COSN26575003 3496 COSMIC
rs1053004 2753 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs747460012 1 dbSNP
rs778445506 4 dbSNP
rs151033214 9 dbSNP
rs376372615 19 dbSNP
rs1418958306 25 dbSNP
rs1382657069 31 dbSNP
rs1047479040 37 dbSNP
rs1025230203 44 dbSNP
rs1184022469 50 dbSNP
rs765471971 54 dbSNP
rs1329100311 56 dbSNP
rs1232560568 60 dbSNP
rs371680667 64 dbSNP
rs1459106820 66 dbSNP
rs767148329 67 dbSNP
rs114401618 69 dbSNP
rs766588194 69 dbSNP
rs1329785042 74 dbSNP
rs1267567943 82 dbSNP
rs761612523 85 dbSNP
rs763273110 88 dbSNP
rs1290307533 96 dbSNP
rs1018548443 98 dbSNP
rs774226646 99 dbSNP
rs1348076516 104 dbSNP
rs1265909331 105 dbSNP
rs1278546395 108 dbSNP
rs867510786 111 dbSNP
rs1447108948 112 dbSNP
rs1378391152 113 dbSNP
rs764054768 116 dbSNP
rs762422383 117 dbSNP
rs1395941160 119 dbSNP
rs1431990598 125 dbSNP
rs774912379 131 dbSNP
rs769474707 132 dbSNP
rs1156527937 148 dbSNP
rs745575806 149 dbSNP
rs1159325348 150 dbSNP
rs1441778499 153 dbSNP
rs776352614 154 dbSNP
rs1193148096 158 dbSNP
rs771372774 165 dbSNP
rs1388455438 166 dbSNP
rs1247271189 170 dbSNP
rs747408974 172 dbSNP
rs1314873547 173 dbSNP
rs1283300367 185 dbSNP
rs1347227953 190 dbSNP
rs750770119 195 dbSNP
rs765798355 209 dbSNP
rs1300623121 211 dbSNP
rs1232977195 216 dbSNP
rs535817996 219 dbSNP
rs1295751848 221 dbSNP
rs772751087 226 dbSNP
rs1317551063 228 dbSNP
rs369339037 230 dbSNP
rs754193509 231 dbSNP
rs892477585 233 dbSNP
rs1421736258 245 dbSNP
rs1393572237 247 dbSNP
rs1173067433 252 dbSNP
rs1174047699 260 dbSNP
rs1052404737 267 dbSNP
rs1454730211 271 dbSNP
rs1427397631 272 dbSNP
rs766859146 276 dbSNP
rs547224085 283 dbSNP
rs1049754104 286 dbSNP
rs1484860955 305 dbSNP
rs1477008571 306 dbSNP
rs879132189 307 dbSNP
rs934012389 310 dbSNP
rs1160610273 320 dbSNP
rs1366270214 326 dbSNP
rs1486176319 327 dbSNP
rs922646385 328 dbSNP
rs547534665 331 dbSNP
rs1282888056 332 dbSNP
rs746707436 337 dbSNP
rs1203505688 344 dbSNP
rs1339302851 347 dbSNP
rs527771115 353 dbSNP
rs556314902 354 dbSNP
rs1229636177 355 dbSNP
rs9891867 356 dbSNP
rs773296241 357 dbSNP
rs1310648460 362 dbSNP
rs1382146641 381 dbSNP
rs767831411 388 dbSNP
rs1294631610 389 dbSNP
rs951603283 397 dbSNP
rs995127521 397 dbSNP
rs978641784 413 dbSNP
rs970376824 416 dbSNP
rs1204854367 428 dbSNP
rs1252293627 429 dbSNP
rs1480750872 431 dbSNP
rs1415599776 439 dbSNP
rs1022916751 440 dbSNP
rs761768929 442 dbSNP
rs992419896 443 dbSNP
rs1314483300 445 dbSNP
rs1295534503 447 dbSNP
rs1443483428 472 dbSNP
rs1407827107 475 dbSNP
rs1184087533 477 dbSNP
rs1395611964 481 dbSNP
rs1387036626 484 dbSNP
rs959703498 488 dbSNP
rs1169481144 491 dbSNP
rs1354956226 496 dbSNP
rs1190101289 506 dbSNP
rs1463670322 514 dbSNP
rs570979439 517 dbSNP
rs1301325141 523 dbSNP
rs1025997768 528 dbSNP
rs541998099 529 dbSNP
rs1317316725 530 dbSNP
rs1463035486 531 dbSNP
rs1366228486 532 dbSNP
rs898945250 538 dbSNP
rs1214564318 541 dbSNP
rs1017499267 552 dbSNP
rs1163647172 559 dbSNP
rs1025283325 562 dbSNP
rs973691816 565 dbSNP
rs552731968 566 dbSNP
rs1005756823 572 dbSNP
rs962465163 573 dbSNP
rs780289949 585 dbSNP
rs758061552 587 dbSNP
rs890025329 589 dbSNP
rs1203715668 591 dbSNP
rs1244516291 592 dbSNP
rs1447570891 594 dbSNP
rs1185873826 596 dbSNP
rs1475313945 596 dbSNP
rs1430121724 598 dbSNP
rs1050011554 600 dbSNP
rs1428838856 604 dbSNP
rs1470446564 606 dbSNP
rs1259266643 612 dbSNP
rs1338772694 620 dbSNP
rs1386616171 625 dbSNP
rs1007174718 632 dbSNP
rs890963677 633 dbSNP
rs370802898 634 dbSNP
rs774523245 638 dbSNP
rs901192684 640 dbSNP
rs531019311 642 dbSNP
rs1053164745 646 dbSNP
rs1322397120 655 dbSNP
rs1223809598 657 dbSNP
rs1198097658 660 dbSNP
rs934723701 666 dbSNP
rs768428811 670 dbSNP
rs1444787694 674 dbSNP
rs1214939054 681 dbSNP
rs1242658532 686 dbSNP
rs563574140 687 dbSNP
rs926098438 688 dbSNP
rs978996255 698 dbSNP
rs531916159 699 dbSNP
rs891691594 712 dbSNP
rs1234048000 720 dbSNP
rs542205092 721 dbSNP
rs1400222557 727 dbSNP
rs113239619 729 dbSNP
rs1337208100 730 dbSNP
rs1435034340 733 dbSNP
rs1302912253 740 dbSNP
rs1240911250 769 dbSNP
rs529178778 771 dbSNP
rs1346555692 776 dbSNP
rs561611194 780 dbSNP
rs1405109037 782 dbSNP
rs563005749 785 dbSNP
rs143028761 796 dbSNP
rs992724674 798 dbSNP
rs1284397583 808 dbSNP
rs1318647916 812 dbSNP
rs1220234240 823 dbSNP
rs1267840489 824 dbSNP
rs1490452952 842 dbSNP
rs1334981785 845 dbSNP
rs17882369 846 dbSNP
rs1025925749 847 dbSNP
rs1177820126 852 dbSNP
rs188436590 855 dbSNP
rs1410332343 857 dbSNP
rs1404038077 867 dbSNP
rs1163511732 868 dbSNP
rs971725676 881 dbSNP
rs1045160288 882 dbSNP
rs963453751 884 dbSNP
rs1426975139 886 dbSNP
rs1016048814 887 dbSNP
rs1393043858 891 dbSNP
rs1006097626 896 dbSNP
rs545531357 897 dbSNP
rs889963084 908 dbSNP
rs1290985280 909 dbSNP
rs1359825000 910 dbSNP
rs1224409765 919 dbSNP
rs1270671648 932 dbSNP
rs1437449517 933 dbSNP
rs1028555172 944 dbSNP
rs1324632266 956 dbSNP
rs1461564568 960 dbSNP
rs930252278 965 dbSNP
rs1183468422 967 dbSNP
rs757232430 978 dbSNP
rs778924760 987 dbSNP
rs377703627 991 dbSNP
rs1209736073 995 dbSNP
rs753951483 997 dbSNP
rs780349523 998 dbSNP
rs372390326 1001 dbSNP
rs1408946313 1004 dbSNP
rs373718081 1009 dbSNP
rs901452964 1011 dbSNP
rs763997609 1013 dbSNP
rs1279226247 1015 dbSNP
rs1402285355 1017 dbSNP
rs762936871 1020 dbSNP
rs1449859858 1027 dbSNP
rs1313800550 1036 dbSNP
rs1383396218 1036 dbSNP
rs752248821 1037 dbSNP
rs142236792 1050 dbSNP
rs759106857 1054 dbSNP
rs140604473 1057 dbSNP
rs147202525 1058 dbSNP
rs368404940 1061 dbSNP
rs773766015 1063 dbSNP
rs145244024 1064 dbSNP
rs779485558 1065 dbSNP
rs948537906 1066 dbSNP
rs1243900024 1067 dbSNP
rs183996904 1068 dbSNP
rs955268684 1070 dbSNP
rs1191676333 1072 dbSNP
rs568695064 1073 dbSNP
rs1372796820 1077 dbSNP
rs1029514274 1081 dbSNP
rs749420271 1085 dbSNP
rs780221973 1091 dbSNP
rs374327257 1094 dbSNP
rs756380897 1095 dbSNP
rs368050581 1108 dbSNP
rs748972949 1110 dbSNP
rs374107124 1113 dbSNP
rs752520342 1114 dbSNP
rs762310059 1115 dbSNP
rs1396815054 1116 dbSNP
rs7207492 1117 dbSNP
rs1296493900 1119 dbSNP
rs758935946 1122 dbSNP
rs557841793 1123 dbSNP
rs1171250945 1126 dbSNP
rs1467124591 1127 dbSNP
rs375752935 1129 dbSNP
rs1186642802 1133 dbSNP
rs903864086 1134 dbSNP
rs368388401 1138 dbSNP
rs1261670514 1140 dbSNP
rs769563218 1145 dbSNP
rs1440924366 1165 dbSNP
rs1045446234 1177 dbSNP
rs908915684 1181 dbSNP
rs896545123 1182 dbSNP
rs1479244764 1185 dbSNP
rs1175270768 1188 dbSNP
rs985915188 1200 dbSNP
rs745710035 1205 dbSNP
rs1156350939 1206 dbSNP
rs201259337 1206 dbSNP
rs867310417 1211 dbSNP
rs869028282 1229 dbSNP
rs1803126 1236 dbSNP
rs1299790750 1243 dbSNP
rs998394512 1246 dbSNP
rs930137822 1247 dbSNP
rs1404499964 1254 dbSNP
rs1394935506 1259 dbSNP
rs1284206204 1260 dbSNP
rs1347421649 1269 dbSNP
rs571072469 1273 dbSNP
rs1260262107 1276 dbSNP
rs965611089 1288 dbSNP
rs918877553 1289 dbSNP
rs41289087 1293 dbSNP
rs1192614406 1294 dbSNP
rs1490297435 1294 dbSNP
rs374525108 1299 dbSNP
rs530910704 1314 dbSNP
rs570130402 1323 dbSNP
rs999224119 1325 dbSNP
rs548332594 1330 dbSNP
rs1434582700 1339 dbSNP
rs1179036729 1340 dbSNP
rs530088285 1341 dbSNP
rs886052940 1342 dbSNP
rs561673659 1343 dbSNP
rs910901689 1346 dbSNP
rs554015274 1347 dbSNP
rs898196758 1347 dbSNP
rs1363443676 1352 dbSNP
rs1012992742 1376 dbSNP
rs746452227 1378 dbSNP
rs1423796868 1380 dbSNP
rs955171872 1383 dbSNP
rs566824382 1386 dbSNP
rs1345480031 1390 dbSNP
rs1306369897 1395 dbSNP
rs988675518 1399 dbSNP
rs117735406 1401 dbSNP
rs1242899687 1410 dbSNP
rs955861995 1418 dbSNP
rs1032814116 1420 dbSNP
rs1234898868 1421 dbSNP
rs1294487374 1424 dbSNP
rs1489248526 1424 dbSNP
rs1373145660 1429 dbSNP
rs533596827 1436 dbSNP
rs970355591 1439 dbSNP
rs1023660997 1443 dbSNP
rs1180383836 1445 dbSNP
rs1429484807 1448 dbSNP
rs1383283808 1449 dbSNP
rs113644902 1450 dbSNP
rs1443980871 1451 dbSNP
rs1351463983 1455 dbSNP
rs1056889573 1463 dbSNP
rs896604790 1469 dbSNP
rs1397242373 1470 dbSNP
rs1056470449 1479 dbSNP
rs1433202978 1480 dbSNP
rs186798539 1484 dbSNP
rs1174712087 1486 dbSNP
rs777345728 1489 dbSNP
rs1036282644 1503 dbSNP
rs1306126370 1514 dbSNP
rs1224745348 1515 dbSNP
rs540114461 1517 dbSNP
rs767787925 1517 dbSNP
rs1250439585 1520 dbSNP
rs1480784574 1536 dbSNP
rs1388933487 1540 dbSNP
rs528332516 1542 dbSNP
rs897337280 1549 dbSNP
rs1460807865 1568 dbSNP
rs908889991 1581 dbSNP
rs563944808 1592 dbSNP
rs986229525 1597 dbSNP
rs572165563 1609 dbSNP
rs923050811 1612 dbSNP
rs1426540928 1614 dbSNP
rs569395714 1617 dbSNP
rs545977519 1619 dbSNP
rs976884651 1621 dbSNP
rs368910594 1630 dbSNP
rs941637082 1630 dbSNP
rs965539806 1645 dbSNP
rs115090026 1664 dbSNP
rs11079042 1666 dbSNP
rs933641992 1675 dbSNP
rs1405453923 1676 dbSNP
rs1453923506 1689 dbSNP
rs969407289 1689 dbSNP
rs759943258 1691 dbSNP
rs1296797389 1692 dbSNP
rs1256519054 1698 dbSNP
rs1211408180 1699 dbSNP
rs751996505 1701 dbSNP
rs988569103 1719 dbSNP
rs886052939 1728 dbSNP
rs894554346 1730 dbSNP
rs1270807263 1731 dbSNP
rs1057151553 1737 dbSNP
rs1002621124 1739 dbSNP
rs897680334 1742 dbSNP
rs1339511089 1745 dbSNP
rs138998960 1751 dbSNP
rs941945346 1758 dbSNP
rs970029187 1765 dbSNP
rs1470359434 1766 dbSNP
rs766973491 1771 dbSNP
rs1178391590 1776 dbSNP
rs1343919543 1777 dbSNP
rs1453762361 1786 dbSNP
rs1460892694 1790 dbSNP
rs1354480019 1805 dbSNP
rs1313855590 1809 dbSNP
rs555637030 1812 dbSNP
rs990876312 1819 dbSNP
rs1344529411 1820 dbSNP
rs1219274351 1821 dbSNP
rs1353197114 1822 dbSNP
rs1280207499 1824 dbSNP
rs1315041325 1829 dbSNP
rs1214995465 1838 dbSNP
rs1166854131 1841 dbSNP
rs1050086855 1842 dbSNP
rs1268424228 1846 dbSNP
rs535612802 1847 dbSNP
rs1170372525 1857 dbSNP
rs931643946 1859 dbSNP
rs1405961791 1862 dbSNP
rs1421774783 1863 dbSNP
rs552970845 1864 dbSNP
rs535347870 1867 dbSNP
rs1423155125 1871 dbSNP
rs577565516 1880 dbSNP
rs1364567398 1895 dbSNP
rs1436823952 1907 dbSNP
rs1418936516 1921 dbSNP
rs1276045982 1923 dbSNP
rs1370542793 1929 dbSNP
rs1034949256 1934 dbSNP
rs559241286 1935 dbSNP
rs1247933347 1945 dbSNP
rs763595711 1947 dbSNP
rs1355832850 1950 dbSNP
rs1231056374 1954 dbSNP
rs1203772160 1955 dbSNP
rs1290854012 1956 dbSNP
rs994225725 1957 dbSNP
rs897222822 1959 dbSNP
rs1231182029 1966 dbSNP
rs1469719998 1971 dbSNP
rs1438366915 1972 dbSNP
rs1274469960 1975 dbSNP
rs1006118753 1976 dbSNP
rs1017079378 1976 dbSNP
rs1037900933 1976 dbSNP
rs1163325787 1976 dbSNP
rs1314644159 1976 dbSNP
rs1325151515 1976 dbSNP
rs1386261243 1976 dbSNP
rs1405517950 1976 dbSNP
rs754306251 1976 dbSNP
rs373212106 1977 dbSNP
rs537640981 1977 dbSNP
rs924793078 1978 dbSNP
rs1271175166 1980 dbSNP
rs1437513822 1983 dbSNP
rs1050427601 1984 dbSNP
rs978018478 1985 dbSNP
rs1235460321 1986 dbSNP
rs1240166691 1996 dbSNP
rs968996889 2001 dbSNP
rs752673079 2008 dbSNP
rs1183522387 2010 dbSNP
rs1022326561 2012 dbSNP
rs1298062988 2015 dbSNP
rs1473988971 2017 dbSNP
rs367884098 2025 dbSNP
rs1416913100 2030 dbSNP
rs1418351879 2034 dbSNP
rs1186806754 2035 dbSNP
rs1170760788 2040 dbSNP
rs1356854732 2040 dbSNP
rs958699777 2053 dbSNP
rs1035712223 2054 dbSNP
rs1002925540 2055 dbSNP
rs948559316 2071 dbSNP
rs1449928892 2072 dbSNP
rs1167400593 2077 dbSNP
rs897943031 2079 dbSNP
rs1405483226 2083 dbSNP
rs1219493077 2086 dbSNP
rs1176454911 2089 dbSNP
rs1321545484 2093 dbSNP
rs1203531969 2094 dbSNP
rs1257448277 2103 dbSNP
rs1014741604 2104 dbSNP
rs146907042 2113 dbSNP
rs915706709 2114 dbSNP
rs1241961657 2124 dbSNP
rs1470463587 2128 dbSNP
rs887667252 2130 dbSNP
rs1477259564 2135 dbSNP
rs993161490 2148 dbSNP
rs1050775369 2154 dbSNP
rs931614384 2156 dbSNP
rs536318793 2157 dbSNP
rs959919684 2157 dbSNP
rs1040092530 2160 dbSNP
rs1315888109 2163 dbSNP
rs184030721 2164 dbSNP
rs923727041 2166 dbSNP
rs1215207411 2169 dbSNP
rs1314801339 2172 dbSNP
rs1343922449 2177 dbSNP
rs1222946301 2180 dbSNP
rs865973211 2181 dbSNP
rs1400163447 2188 dbSNP
rs961468223 2191 dbSNP
rs1347740937 2193 dbSNP
rs569957236 2196 dbSNP
rs377364072 2207 dbSNP
rs1283923477 2219 dbSNP
rs1488840508 2226 dbSNP
rs35427318 2248 dbSNP
rs1193871862 2256 dbSNP
rs1376085061 2257 dbSNP
rs947547118 2258 dbSNP
rs1479275922 2265 dbSNP
rs1197533804 2271 dbSNP
rs1377710525 2273 dbSNP
rs914788917 2276 dbSNP
rs193126798 2278 dbSNP
rs991718184 2280 dbSNP
rs1359602872 2286 dbSNP
rs1395355670 2287 dbSNP
rs1016964951 2289 dbSNP
rs1328053675 2298 dbSNP
rs958668641 2303 dbSNP
rs112608032 2311 dbSNP
rs1035641116 2315 dbSNP
rs1386484071 2337 dbSNP
rs1302002075 2338 dbSNP
rs1332915669 2339 dbSNP
rs1344889009 2340 dbSNP
rs372716251 2341 dbSNP
rs149628743 2342 dbSNP
rs1382030707 2344 dbSNP
rs1015430633 2347 dbSNP
rs886052938 2348 dbSNP
rs1253044206 2349 dbSNP
rs886052937 2352 dbSNP
rs1267388675 2354 dbSNP
rs1192473022 2357 dbSNP
rs1452855400 2363 dbSNP
rs1484688700 2363 dbSNP
rs556139569 2376 dbSNP
rs1028887029 2380 dbSNP
rs1259793267 2381 dbSNP
rs1440308713 2382 dbSNP
rs996083436 2384 dbSNP
rs1319132381 2389 dbSNP
rs756528147 2390 dbSNP
rs1278768257 2396 dbSNP
rs552123985 2398 dbSNP
rs1330814452 2399 dbSNP
rs1242966702 2406 dbSNP
rs3744483 2407 dbSNP
rs75018295 2415 dbSNP
rs902223944 2421 dbSNP
rs1358072471 2425 dbSNP
rs1193564006 2429 dbSNP
rs541925122 2431 dbSNP
rs188588928 2433 dbSNP
rs1289679848 2435 dbSNP
rs947554247 2441 dbSNP
rs915740202 2442 dbSNP
rs914737078 2443 dbSNP
rs1240999563 2447 dbSNP
rs1454075269 2451 dbSNP
rs1362251106 2456 dbSNP
rs1171565964 2459 dbSNP
rs868515978 2463 dbSNP
rs183293865 2465 dbSNP
rs781243612 2466 dbSNP
rs1370385966 2473 dbSNP
rs937575580 2479 dbSNP
rs919162188 2483 dbSNP
rs1401129478 2490 dbSNP
rs928929680 2494 dbSNP
rs972742250 2496 dbSNP
rs886052936 2497 dbSNP
rs547767441 2500 dbSNP
rs541024608 2503 dbSNP
rs577652056 2504 dbSNP
rs954132444 2506 dbSNP
rs559186748 2507 dbSNP
rs1028933365 2511 dbSNP
rs998343820 2516 dbSNP
rs1200407513 2517 dbSNP
rs1260551465 2518 dbSNP
rs985294547 2525 dbSNP
rs1489090890 2532 dbSNP
rs537273486 2538 dbSNP
rs576595680 2545 dbSNP
rs1255823634 2551 dbSNP
rs1210690577 2555 dbSNP
rs1349225947 2558 dbSNP
rs879158757 2569 dbSNP
rs554827097 2574 dbSNP
rs1467228103 2578 dbSNP
rs190710939 2579 dbSNP
rs1359087653 2581 dbSNP
rs999070201 2584 dbSNP
rs1307014962 2595 dbSNP
rs1360322444 2597 dbSNP
rs75454844 2599 dbSNP
rs965946715 2601 dbSNP
rs185508151 2619 dbSNP
rs1310828604 2622 dbSNP
rs894204518 2632 dbSNP
rs1057387216 2634 dbSNP
rs999159136 2635 dbSNP
rs1375933231 2637 dbSNP
rs902193273 2651 dbSNP
rs1043453080 2653 dbSNP
rs1210748114 2666 dbSNP
rs1257497768 2677 dbSNP
rs763077835 2681 dbSNP
rs1215688956 2684 dbSNP
rs111904020 2686 dbSNP
rs547430088 2689 dbSNP
rs1478960641 2691 dbSNP
rs1197341682 2692 dbSNP
rs1424563324 2699 dbSNP
rs894917706 2703 dbSNP
rs182824638 2710 dbSNP
rs1170594807 2711 dbSNP
rs941924672 2722 dbSNP
rs1055885995 2727 dbSNP
rs937544615 2730 dbSNP
rs1360763037 2735 dbSNP
rs928851826 2736 dbSNP
rs1187596532 2737 dbSNP
rs1401528632 2744 dbSNP
rs1053004 2753 dbSNP
rs886052935 2755 dbSNP
rs1366326259 2756 dbSNP
rs886052934 2757 dbSNP
rs1219685299 2760 dbSNP
rs1303288296 2765 dbSNP
rs940673921 2766 dbSNP
rs954299992 2767 dbSNP
rs1239149515 2770 dbSNP
rs373503231 2775 dbSNP
rs921353125 2777 dbSNP
rs1258810791 2785 dbSNP
rs907855026 2786 dbSNP
rs984834346 2791 dbSNP
rs976959973 2807 dbSNP
rs552467234 2820 dbSNP
rs965539927 2822 dbSNP
rs530683057 2823 dbSNP
rs769760865 2831 dbSNP
rs974542354 2837 dbSNP
rs1439692600 2845 dbSNP
rs1159617370 2849 dbSNP
rs1220604781 2854 dbSNP
rs1382569836 2867 dbSNP
rs965868337 2883 dbSNP
rs1018847400 2886 dbSNP
rs1332868828 2887 dbSNP
rs1421072326 2904 dbSNP
rs1321199186 2906 dbSNP
rs999119253 2908 dbSNP
rs10775 2916 dbSNP
rs376764794 2923 dbSNP
rs1021730051 2924 dbSNP
rs886052933 2932 dbSNP
rs1053005 2935 dbSNP
rs1355890980 2941 dbSNP
rs1226776875 2945 dbSNP
rs1289406522 2946 dbSNP
rs1322600385 2947 dbSNP
rs1010609641 2948 dbSNP
rs894889757 2949 dbSNP
rs548033008 2950 dbSNP
rs1035442349 2962 dbSNP
rs1395759446 2971 dbSNP
rs1240359704 2973 dbSNP
rs1472000952 2987 dbSNP
rs1163081576 2991 dbSNP
rs1412615593 2998 dbSNP
rs1405648719 3000 dbSNP
rs1298247744 3003 dbSNP
rs1166211405 3004 dbSNP
rs1466735862 3005 dbSNP
rs1445902011 3009 dbSNP
rs1331988359 3012 dbSNP
rs138326799 3013 dbSNP
rs1445504210 3014 dbSNP
rs897670258 3020 dbSNP
rs907394439 3023 dbSNP
rs1230255214 3024 dbSNP
rs941976958 3046 dbSNP
rs1475716153 3052 dbSNP
rs1199401895 3062 dbSNP
rs1260518013 3065 dbSNP
rs1441260563 3071 dbSNP
rs1187265945 3072 dbSNP
rs1238420108 3073 dbSNP
rs1370530062 3074 dbSNP
rs1472882068 3080 dbSNP
rs1189662593 3083 dbSNP
rs150467429 3083 dbSNP
rs531760487 3084 dbSNP
rs541059766 3092 dbSNP
rs1170824966 3094 dbSNP
rs532120833 3096 dbSNP
rs886733912 3106 dbSNP
rs1333195912 3108 dbSNP
rs1049525647 3109 dbSNP
rs1450421316 3113 dbSNP
rs1276514808 3135 dbSNP
rs1219321305 3149 dbSNP
rs564695836 3153 dbSNP
rs1048908764 3168 dbSNP
rs1280242071 3180 dbSNP
rs1343413446 3186 dbSNP
rs1200386276 3200 dbSNP
rs1279731672 3207 dbSNP
rs878873898 3207 dbSNP
rs879147401 3208 dbSNP
rs1477895055 3211 dbSNP
rs932668797 3216 dbSNP
rs921226719 3219 dbSNP
rs976842905 3224 dbSNP
rs886052932 3226 dbSNP
rs1200547442 3227 dbSNP
rs924790647 3228 dbSNP
rs1053023 3229 dbSNP
rs969402569 3240 dbSNP
rs1296183457 3246 dbSNP
rs1021870093 3258 dbSNP
rs1400849612 3259 dbSNP
rs1300040731 3270 dbSNP
rs991601427 3272 dbSNP
rs1233097444 3281 dbSNP
rs1347802112 3283 dbSNP
rs958400994 3284 dbSNP
rs1285830392 3288 dbSNP
rs1487727092 3289 dbSNP
rs1035284022 3295 dbSNP
rs974840137 3297 dbSNP
rs1449404093 3298 dbSNP
rs576615644 3299 dbSNP
rs1455574514 3310 dbSNP
rs1156545760 3318 dbSNP
rs911712994 3319 dbSNP
rs977973524 3320 dbSNP
rs1358802474 3323 dbSNP
rs886052931 3337 dbSNP
rs751300490 3341 dbSNP
rs967025387 3343 dbSNP
rs1388904284 3349 dbSNP
rs1386253769 3360 dbSNP
rs1224550290 3362 dbSNP
rs1324361851 3369 dbSNP
rs1285719676 3385 dbSNP
rs1373812454 3388 dbSNP
rs1236700263 3391 dbSNP
rs1022245945 3400 dbSNP
rs762995262 3403 dbSNP
rs1309903204 3405 dbSNP
rs988251590 3408 dbSNP
rs555195129 3413 dbSNP
rs1324676892 3416 dbSNP
rs1262103442 3423 dbSNP
rs886052930 3423 dbSNP
rs958005205 3423 dbSNP
rs200029754 3425 dbSNP
rs773939681 3426 dbSNP
rs886052929 3426 dbSNP
rs80323123 3427 dbSNP
rs886052928 3427 dbSNP
rs1392501929 3434 dbSNP
rs1176735432 3447 dbSNP
rs1491138124 3447 dbSNP
rs1050370063 3448 dbSNP
rs1183771268 3448 dbSNP
rs1290846006 3448 dbSNP
rs1331288315 3448 dbSNP
rs1336335079 3448 dbSNP
rs1366933011 3448 dbSNP
rs1378360438 3448 dbSNP
rs1393495588 3448 dbSNP
rs1396793780 3448 dbSNP
rs1457647738 3448 dbSNP
rs147045863 3448 dbSNP
rs397857989 3448 dbSNP
rs398041696 3448 dbSNP
rs760910438 3448 dbSNP
rs887733546 3448 dbSNP
rs931859197 3448 dbSNP
rs1453518197 3450 dbSNP
rs1458212348 3461 dbSNP
rs1178714858 3478 dbSNP
rs1364834870 3486 dbSNP
rs1423396633 3487 dbSNP
rs1188551640 3490 dbSNP
rs1476871669 3492 dbSNP
rs1041042698 3499 dbSNP
rs944126170 3500 dbSNP
rs1453164404 3501 dbSNP
rs924675023 3502 dbSNP
rs959050460 3503 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gagUGUGUGACAGAGGGACCu 5'
             || | || ||||||||| 
Target 5' uugACUCCCUUUCUCCCUGGa 3'
 		10 - 30
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000585517.1 | 3UTR | CUUACAACCUUGACUCCCUUUCUCCCUGGACUUGAUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
104 hsa-miR-7113-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059935 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT083388 E2F1 E2F transcription factor 1 2 4
MIRT183511 BTG2 BTG anti-proliferation factor 2 2 2
MIRT192333 KLF13 Kruppel like factor 13 2 2
MIRT347200 SIN3B SIN3 transcription regulator family member B 2 2
MIRT451431 TJP3 tight junction protein 3 2 2
MIRT452499 HMGXB3 HMG-box containing 3 2 2
MIRT453830 SAA1 serum amyloid A1 2 2
MIRT454309 ZNF134 zinc finger protein 134 2 2
MIRT454833 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT454890 RAD50 RAD50 double strand break repair protein 2 2
MIRT455881 KIF2C kinesin family member 2C 2 2
MIRT456161 TTF2 transcription termination factor 2 2 2
MIRT456945 LRP10 LDL receptor related protein 10 2 2
MIRT457627 UPK3BL uroplakin 3B like 1 2 2
MIRT459486 CCL11 C-C motif chemokine ligand 11 2 2
MIRT459585 NLGN2 neuroligin 2 2 2
MIRT460719 FN3KRP fructosamine 3 kinase related protein 2 2
MIRT461576 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461817 SNAP23 synaptosome associated protein 23 2 2
MIRT462409 RBM28 RNA binding motif protein 28 2 2
MIRT462434 GTPBP10 GTP binding protein 10 2 4
MIRT462523 ZNF500 zinc finger protein 500 2 2
MIRT462787 ZNF8 zinc finger protein 8 2 2
MIRT463898 WNT7B Wnt family member 7B 2 4
MIRT466954 STAT3 signal transducer and activator of transcription 3 2 2
MIRT467035 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT467436 SND1 staphylococcal nuclease and tudor domain containing 1 2 2
MIRT468780 SCD stearoyl-CoA desaturase 2 2
MIRT469765 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470784 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT471842 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472222 NGFR nerve growth factor receptor 2 2
MIRT472538 NACC1 nucleus accumbens associated 1 2 2
MIRT472937 MSN moesin 2 2
MIRT477462 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 2
MIRT479077 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479260 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT480254 C8orf58 chromosome 8 open reading frame 58 2 2
MIRT480552 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT480929 BCAT1 branched chain amino acid transaminase 1 2 2
MIRT482048 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT483182 HIST1H2AH histone cluster 1 H2A family member h 2 8
MIRT486998 ZFAND2B zinc finger AN1-type containing 2B 2 2
MIRT488253 DNLZ DNL-type zinc finger 2 4
MIRT488588 ST7L suppression of tumorigenicity 7 like 2 2
MIRT491068 ACVR1B activin A receptor type 1B 2 2
MIRT492618 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT493817 FSCN1 fascin actin-bundling protein 1 2 2
MIRT495988 LTBP2 latent transforming growth factor beta binding protein 2 2 2
MIRT499248 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT500451 ZFP36L1 ZFP36 ring finger protein like 1 2 2
MIRT508311 RPL18 ribosomal protein L18 2 4
MIRT509711 ANKRD23 ankyrin repeat domain 23 2 2
MIRT531511 NONO non-POU domain containing octamer binding 2 2
MIRT531711 ABCB6 ATP binding cassette subfamily B member 6 (Langereis blood group) 2 2
MIRT533753 TMEM184B transmembrane protein 184B 2 2
MIRT535987 MED28 mediator complex subunit 28 2 4
MIRT537865 EDA2R ectodysplasin A2 receptor 2 2
MIRT539922 DUSP28 dual specificity phosphatase 28 2 2
MIRT541124 RAB34 RAB34, member RAS oncogene family 2 2
MIRT543053 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT562618 BCL7A BCL tumor suppressor 7A 2 2
MIRT563606 ZNF277 zinc finger protein 277 2 2
MIRT573680 HES6 hes family bHLH transcription factor 6 2 2
MIRT609224 TMEM178B transmembrane protein 178B 2 2
MIRT611658 LIPC lipase C, hepatic type 2 2
MIRT612822 KLHL3 kelch like family member 3 2 2
MIRT613217 CCDC85C coiled-coil domain containing 85C 2 4
MIRT617687 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT618536 TMEM241 transmembrane protein 241 2 2
MIRT622094 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT627600 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT637157 PCDHA6 protocadherin alpha 6 2 4
MIRT642156 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT643941 WIPF3 WAS/WASL interacting protein family member 3 2 2
MIRT646855 SLC35E4 solute carrier family 35 member E4 2 2
MIRT647401 SPNS2 sphingolipid transporter 2 2 2
MIRT648708 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT655571 OXSR1 oxidative stress responsive 1 2 2
MIRT655878 NFASC neurofascin 2 2
MIRT660309 BHLHE40 basic helix-loop-helix family member e40 2 2
MIRT664073 ZNF417 zinc finger protein 417 2 2
MIRT667522 LUC7L2 LUC7 like 2, pre-mRNA splicing factor 2 2
MIRT667852 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT669240 C7orf55-LUC7L2 C7orf55-LUC7L2 readthrough 2 2
MIRT674763 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2 2
MIRT679704 GRK4 G protein-coupled receptor kinase 4 2 2
MIRT681445 CIITA class II major histocompatibility complex transactivator 2 2
MIRT684814 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT694604 AAR2 AAR2 splicing factor homolog 2 2
MIRT696944 CERK ceramide kinase 2 2
MIRT704430 CTNNBIP1 catenin beta interacting protein 1 2 2
MIRT708304 MPPE1 metallophosphoesterase 1 2 2
MIRT708874 TMEM151B transmembrane protein 151B 2 2
MIRT713557 TBC1D22B TBC1 domain family member 22B 2 2
MIRT714998 TSPAN11 tetraspanin 11 2 2
MIRT715993 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT718872 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT719664 DMRT2 doublesex and mab-3 related transcription factor 2 2 2
MIRT720825 C6orf89 chromosome 6 open reading frame 89 2 2
MIRT723357 ASCL2 achaete-scute family bHLH transcription factor 2 2 2
MIRT724561 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT732592 WNT10B Wnt family member 10B 2 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-7113 Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-7113 Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-7113-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-7113-5p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-7113-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-7113-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)

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