pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SRRD   
Synonyms HC/HCC, SRR1L
Description SRR1 domain containing
Transcript NM_001013694   
Expression
Putative miRNA Targets on SRRD
3'UTR of SRRD
(miRNA target sites are highlighted)
>SRRD|NM_001013694|3'UTR
   1 ACTCGTTGTGAGGTACTCAGTGTTGGCTGAGGTAGAAGCTGCCACCAGAGACTAAAGGGAAGGCTGCTATGGAGGAACTA
  81 CAGAGAACTCCTTTGCCAGGAAAGAACATCAACTTGGCTGTCCTGTTTTGAGGACGATACCCCACATGAGGACTTGGTAT
 161 AAAGATTCCTGCCCTACGTGGCATTGTCCCATTTTACATCCTTCCCTCATGACCTGGCCTGATGTGGAGTAGCTCCTGAG
 241 TAAAGAAGTTACCCTTTTGAAGGTGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaGGUGACGAUGUUGGAGGGucu 5'
            |||:| :|||| |||:||   
Target 5' tcCCATT-TTACATCCTTCCctc 3'
187 - 208 120.00 -17.12
2
miRNA  3' aaggUGA--CGAUGUUGGAGGGUcu 5'
              :||  | || || || |||  
Target 5' gttgGCTGAGGTAGAAGCTGCCAcc 3'
22 - 46 105.00 -11.00
3
miRNA  3' aaGGUGACGAUGUUG----GAGGGUCu 5'
            |:|| |  | |||    :| |||| 
Target 5' aaCTACAG--AGAACTCCTTTGCCAGg 3'
76 - 100 103.00 -14.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30608967 6 COSMIC
COSN31602895 26 COSMIC
COSN4908674 44 COSMIC
COSN8015484 96 COSMIC
COSN31522984 137 COSMIC
COSN30530459 279 COSMIC
COSN30143786 292 COSMIC
COSN31556757 309 COSMIC
COSM2935605 356 COSMIC
COSM4733294 370 COSMIC
COSM4974742 381 COSMIC
COSM1032989 384 COSMIC
COSM9540968 385 COSMIC
COSM8266745 387 COSMIC
COSM1032990 395 COSMIC
COSM1415369 396 COSMIC
COSM7975540 398 COSMIC
COSM8507956 417 COSMIC
COSM4103195 418 COSMIC
COSM6443594 419 COSMIC
COSM5859104 422 COSMIC
COSM7588613 439 COSMIC
COSM7444106 463 COSMIC
COSM5788732 470 COSMIC
COSM8814322 480 COSMIC
COSM4186258 485 COSMIC
COSM1032991 486 COSMIC
COSM4614893 488 COSMIC
COSM4156101 507 COSMIC
COSM4156102 509 COSMIC
COSM4156103 510 COSMIC
COSM4751575 512 COSMIC
COSM9509848 522 COSMIC
COSM4103196 532 COSMIC
COSM6800569 543 COSMIC
COSM9083541 566 COSMIC
COSM8840686 574 COSMIC
COSM5506549 602 COSMIC
COSM9075212 610 COSMIC
COSM7607519 611 COSMIC
COSM7607529 612 COSMIC
COSM5511206 621 COSMIC
COSM2935608 634 COSMIC
COSM5759338 641 COSMIC
COSM9185455 644 COSMIC
COSM6452410 645 COSMIC
COSM9489620 655 COSMIC
COSM7620628 661 COSMIC
COSM5818908 673 COSMIC
COSM8221273 674 COSMIC
COSM4103197 677 COSMIC
COSM726043 682 COSMIC
COSM5550433 694 COSMIC
COSN26998412 713 COSMIC
COSN30639356 714 COSMIC
COSN30503447 747 COSMIC
COSN31554350 748 COSMIC
COSN31588193 764 COSMIC
COSN26998410 784 COSMIC
COSN5990078 853 COSMIC
COSN25433045 1168 COSMIC
COSN5990079 1173 COSMIC
COSN18756869 1358 COSMIC
COSN26764307 1497 COSMIC
COSN25074398 1785 COSMIC
COSN31554256 2358 COSMIC
COSN30121585 2388 COSMIC
COSN30156980 2425 COSMIC
COSN30503937 2430 COSMIC
COSN30481124 2434 COSMIC
COSM1032992 2485 COSMIC
COSM3730227 2489 COSMIC
COSM5859105 2493 COSMIC
COSM4790311 2499 COSMIC
COSM3681407 2518 COSMIC
COSM4002120 2518 COSMIC
COSM4733295 2525 COSMIC
COSM4103198 2548 COSMIC
COSM4440646 2563 COSMIC
COSM4963038 2568 COSMIC
COSM9874460 2597 COSMIC
COSM6800563 2599 COSMIC
COSM3734394 2602 COSMIC
COSM4103199 2608 COSMIC
COSM7164374 2623 COSMIC
COSM3748168 2632 COSMIC
COSN31532378 2656 COSMIC
COSN30507099 2664 COSMIC
COSN30517443 2692 COSMIC
COSN26998411 2699 COSMIC
COSN30101247 2703 COSMIC
COSN30101261 2704 COSMIC
COSN28187863 2766 COSMIC
COSN19693741 2772 COSMIC
COSN30530982 2919 COSMIC
COSN5136820 2948 COSMIC
COSN31583927 2949 COSMIC
COSN29175535 2974 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs368093065 3 dbSNP
rs1345946711 5 dbSNP
rs768996357 5 dbSNP
rs757744125 6 dbSNP
rs775641346 7 dbSNP
rs372305952 8 dbSNP
rs755727393 13 dbSNP
rs1407930636 16 dbSNP
rs377155634 17 dbSNP
rs779174936 19 dbSNP
rs368505595 20 dbSNP
rs1416506268 21 dbSNP
rs1355592495 24 dbSNP
rs754941272 27 dbSNP
rs1311689870 30 dbSNP
rs1317035875 32 dbSNP
rs778865452 33 dbSNP
rs747920354 34 dbSNP
rs1388369507 35 dbSNP
rs1323775291 37 dbSNP
rs372640084 38 dbSNP
rs548387383 40 dbSNP
rs746041781 46 dbSNP
rs375860165 48 dbSNP
rs775633695 53 dbSNP
rs577061104 63 dbSNP
rs2269649 71 dbSNP
rs1367596224 72 dbSNP
rs1026866337 73 dbSNP
rs1055939146 79 dbSNP
rs114590603 101 dbSNP
rs1484823224 102 dbSNP
rs575055761 109 dbSNP
rs1196601934 114 dbSNP
rs1480207889 119 dbSNP
rs1249377399 122 dbSNP
rs542130726 123 dbSNP
rs1235080930 124 dbSNP
rs564026303 136 dbSNP
rs745930607 144 dbSNP
rs1014398963 145 dbSNP
rs1329208117 146 dbSNP
rs530963587 148 dbSNP
rs1390440141 154 dbSNP
rs115358886 157 dbSNP
rs969742554 159 dbSNP
rs776589742 160 dbSNP
rs1419141985 171 dbSNP
rs34839069 172 dbSNP
rs1164820357 175 dbSNP
rs534524731 178 dbSNP
rs565844400 179 dbSNP
rs1248375382 183 dbSNP
rs528596348 185 dbSNP
rs150122446 191 dbSNP
rs1045523 192 dbSNP
rs376350902 198 dbSNP
rs913031840 218 dbSNP
rs1215257574 224 dbSNP
rs1263057573 225 dbSNP
rs1482558475 226 dbSNP
rs1200297743 228 dbSNP
rs945492787 229 dbSNP
rs1011013640 235 dbSNP
rs1352278427 238 dbSNP
rs772993672 241 dbSNP
rs1018749495 244 dbSNP
rs529301973 246 dbSNP
rs1333558747 249 dbSNP
rs964255542 258 dbSNP
rs1443640549 264 dbSNP
rs180739776 276 dbSNP
rs1029925692 277 dbSNP
rs1404077921 278 dbSNP
rs951650594 279 dbSNP
rs911957995 282 dbSNP
rs1469823496 283 dbSNP
rs1365533279 284 dbSNP
rs112158657 285 dbSNP
rs909579263 291 dbSNP
rs762981297 293 dbSNP
rs764675405 294 dbSNP
rs1212054520 295 dbSNP
rs1252114062 298 dbSNP
rs748354044 298 dbSNP
rs774949405 299 dbSNP
rs762441611 300 dbSNP
rs1392037995 302 dbSNP
rs767926947 305 dbSNP
rs1167879302 307 dbSNP
rs750832696 310 dbSNP
rs1459230975 315 dbSNP
rs369030233 318 dbSNP
rs772234370 319 dbSNP
rs915617326 326 dbSNP
rs766014682 327 dbSNP
rs1322156466 328 dbSNP
rs901341799 330 dbSNP
rs753360683 331 dbSNP
rs1297479407 335 dbSNP
rs778421528 336 dbSNP
rs752559901 345 dbSNP
rs758342275 346 dbSNP
rs1356107431 348 dbSNP
rs1208274522 350 dbSNP
rs1250209712 351 dbSNP
rs1328642144 352 dbSNP
rs1465378564 356 dbSNP
rs777527490 357 dbSNP
rs1246289788 370 dbSNP
rs746844288 371 dbSNP
rs1165404685 376 dbSNP
rs1367621707 379 dbSNP
rs34981548 387 dbSNP
rs780188579 388 dbSNP
rs749547123 395 dbSNP
rs16982207 396 dbSNP
rs1394284432 400 dbSNP
rs145968579 404 dbSNP
rs373549377 408 dbSNP
rs1317907490 409 dbSNP
rs570548923 411 dbSNP
rs772765613 415 dbSNP
rs1242689323 416 dbSNP
rs1314136444 418 dbSNP
rs773624109 419 dbSNP
rs760988087 420 dbSNP
rs374904559 422 dbSNP
rs17850763 423 dbSNP
rs753388584 424 dbSNP
rs759190048 429 dbSNP
rs752259502 434 dbSNP
rs1024086601 439 dbSNP
rs758325865 440 dbSNP
rs1421807217 447 dbSNP
rs553055105 453 dbSNP
rs3177310 454 dbSNP
rs756952141 463 dbSNP
rs781071325 467 dbSNP
rs369081686 468 dbSNP
rs769013718 470 dbSNP
rs1401985128 479 dbSNP
rs149236260 483 dbSNP
rs574318611 485 dbSNP
rs535442688 486 dbSNP
rs773643884 487 dbSNP
rs1290554925 498 dbSNP
rs1032637543 507 dbSNP
rs761271278 510 dbSNP
rs1314784321 514 dbSNP
rs957327049 519 dbSNP
rs1375012861 520 dbSNP
rs771163665 528 dbSNP
rs777063374 531 dbSNP
rs1314023230 533 dbSNP
rs1210969044 537 dbSNP
rs759171870 539 dbSNP
rs1238566452 541 dbSNP
rs1255509340 545 dbSNP
rs1484625760 548 dbSNP
rs377384093 553 dbSNP
rs1207214131 554 dbSNP
rs764932526 557 dbSNP
rs1472174887 559 dbSNP
rs144403503 560 dbSNP
rs754504467 561 dbSNP
rs763682219 562 dbSNP
rs1174689819 564 dbSNP
rs148804829 565 dbSNP
rs757223429 566 dbSNP
rs148812134 567 dbSNP
rs750291699 578 dbSNP
rs147941626 584 dbSNP
rs1296640899 585 dbSNP
rs779320513 592 dbSNP
rs140083093 593 dbSNP
rs1300594381 595 dbSNP
rs986593060 596 dbSNP
rs1047124063 598 dbSNP
rs1230502472 600 dbSNP
rs758506991 601 dbSNP
rs777944340 602 dbSNP
rs747412650 606 dbSNP
rs771523466 609 dbSNP
rs776851933 613 dbSNP
rs746269405 616 dbSNP
rs143452076 621 dbSNP
rs773395758 625 dbSNP
rs201235822 627 dbSNP
rs915576147 630 dbSNP
rs371046387 634 dbSNP
rs974718255 636 dbSNP
rs376300046 640 dbSNP
rs761644057 641 dbSNP
rs561791002 645 dbSNP
rs147683514 646 dbSNP
rs756024698 648 dbSNP
rs367681837 650 dbSNP
rs747153588 654 dbSNP
rs766303217 656 dbSNP
rs1208068491 660 dbSNP
rs753163860 664 dbSNP
rs1212768097 671 dbSNP
rs371455445 673 dbSNP
rs374879389 674 dbSNP
rs758655707 675 dbSNP
rs1250827445 676 dbSNP
rs777697682 683 dbSNP
rs1188583600 689 dbSNP
rs1048479505 691 dbSNP
rs1475333828 693 dbSNP
rs747177089 694 dbSNP
rs1416391788 695 dbSNP
rs1406383886 696 dbSNP
rs757671059 698 dbSNP
rs781746152 707 dbSNP
rs148164977 708 dbSNP
rs746394406 709 dbSNP
rs758880366 715 dbSNP
rs1233822716 716 dbSNP
rs1428486041 717 dbSNP
rs775837320 719 dbSNP
rs748881857 720 dbSNP
rs367942266 721 dbSNP
rs1270865428 725 dbSNP
rs773731544 726 dbSNP
rs1208967066 730 dbSNP
rs1266872737 739 dbSNP
rs200343279 740 dbSNP
rs372171229 746 dbSNP
rs184864753 748 dbSNP
rs1045926537 753 dbSNP
rs1481367785 754 dbSNP
rs1308282797 756 dbSNP
rs558034655 758 dbSNP
rs1191248508 764 dbSNP
rs1326545565 768 dbSNP
rs1457325910 776 dbSNP
rs1347636432 779 dbSNP
rs905611208 780 dbSNP
rs747391772 789 dbSNP
rs373495506 793 dbSNP
rs1160604532 799 dbSNP
rs114418963 810 dbSNP
rs1051165502 818 dbSNP
rs1410771059 828 dbSNP
rs1054134197 838 dbSNP
rs371243047 843 dbSNP
rs1172746010 846 dbSNP
rs892821577 853 dbSNP
rs1017194843 854 dbSNP
rs963249428 894 dbSNP
rs1009886056 924 dbSNP
rs1217975353 933 dbSNP
rs1457508994 936 dbSNP
rs1303837916 940 dbSNP
rs1285667125 943 dbSNP
rs1238208609 945 dbSNP
rs1347998266 955 dbSNP
rs1013160751 956 dbSNP
rs1303812233 957 dbSNP
rs1386170980 979 dbSNP
rs1365334146 985 dbSNP
rs556738425 992 dbSNP
rs1398632505 997 dbSNP
rs1430910715 998 dbSNP
rs1020658908 1009 dbSNP
rs1156506861 1018 dbSNP
rs955309783 1020 dbSNP
rs1023081661 1026 dbSNP
rs1397301697 1028 dbSNP
rs563427702 1044 dbSNP
rs1018023538 1053 dbSNP
rs1433133290 1059 dbSNP
rs1265956661 1064 dbSNP
rs1188799324 1069 dbSNP
rs981173997 1072 dbSNP
rs1216667657 1077 dbSNP
rs757528884 1079 dbSNP
rs1280788896 1082 dbSNP
rs530864868 1086 dbSNP
rs2032574 1088 dbSNP
rs1310213092 1090 dbSNP
rs1297686387 1099 dbSNP
rs1221166596 1110 dbSNP
rs1339300260 1111 dbSNP
rs868413376 1112 dbSNP
rs1416244302 1115 dbSNP
rs746052611 1121 dbSNP
rs1301888853 1123 dbSNP
rs1465915048 1125 dbSNP
rs1376255239 1127 dbSNP
rs1490820335 1129 dbSNP
rs1214305255 1144 dbSNP
rs943317556 1145 dbSNP
rs1191514363 1150 dbSNP
rs1486687167 1156 dbSNP
rs974676107 1159 dbSNP
rs952167297 1165 dbSNP
rs1188016761 1167 dbSNP
rs983471136 1169 dbSNP
rs1236950220 1172 dbSNP
rs1423452849 1177 dbSNP
rs1317147755 1203 dbSNP
rs144147871 1205 dbSNP
rs1234660870 1211 dbSNP
rs368969867 1217 dbSNP
rs1355540599 1225 dbSNP
rs1367456236 1228 dbSNP
rs534829782 1232 dbSNP
rs1393911265 1233 dbSNP
rs1400545825 1236 dbSNP
rs1300224018 1243 dbSNP
rs933956902 1245 dbSNP
rs1051194871 1255 dbSNP
rs950238515 1264 dbSNP
rs1169159135 1267 dbSNP
rs1476251018 1269 dbSNP
rs887156718 1270 dbSNP
rs940174826 1277 dbSNP
rs1045947388 1283 dbSNP
rs927415228 1288 dbSNP
rs769885587 1297 dbSNP
rs1418791328 1311 dbSNP
rs1196097427 1320 dbSNP
rs1256157267 1321 dbSNP
rs1457147167 1321 dbSNP
rs898650749 1329 dbSNP
rs1334976174 1330 dbSNP
rs1264301553 1333 dbSNP
rs1242201549 1334 dbSNP
rs1054636270 1343 dbSNP
rs892882734 1347 dbSNP
rs546338227 1350 dbSNP
rs1013607758 1353 dbSNP
rs752093181 1359 dbSNP
rs906888968 1359 dbSNP
rs1162665893 1366 dbSNP
rs75970513 1372 dbSNP
rs74355529 1373 dbSNP
rs1002458879 1374 dbSNP
rs1179495083 1378 dbSNP
rs754598030 1379 dbSNP
rs866480434 1386 dbSNP
rs989910815 1389 dbSNP
rs1315176836 1398 dbSNP
rs1452070741 1402 dbSNP
rs1288535297 1405 dbSNP
rs1041348949 1407 dbSNP
rs1352200811 1420 dbSNP
rs568193964 1425 dbSNP
rs116044790 1426 dbSNP
rs1353465991 1430 dbSNP
rs1307478778 1436 dbSNP
rs1213802010 1439 dbSNP
rs1332121814 1440 dbSNP
rs1323458611 1442 dbSNP
rs1018077820 1452 dbSNP
rs963876099 1460 dbSNP
rs1159533837 1464 dbSNP
rs1433048809 1475 dbSNP
rs1217756139 1476 dbSNP
rs1378288893 1477 dbSNP
rs9608493 1480 dbSNP
rs1235464617 1484 dbSNP
rs1461041124 1486 dbSNP
rs1175210824 1504 dbSNP
rs775584534 1511 dbSNP
rs1028195050 1512 dbSNP
rs535511893 1513 dbSNP
rs146723512 1514 dbSNP
rs907843748 1516 dbSNP
rs575510911 1517 dbSNP
rs1487063929 1518 dbSNP
rs981716416 1531 dbSNP
rs927519060 1545 dbSNP
rs755691768 1546 dbSNP
rs1274821620 1556 dbSNP
rs1231683858 1558 dbSNP
rs1328303646 1559 dbSNP
rs940128732 1560 dbSNP
rs189669718 1565 dbSNP
rs1358903390 1568 dbSNP
rs1358795837 1573 dbSNP
rs914310347 1576 dbSNP
rs772042942 1590 dbSNP
rs945781531 1591 dbSNP
rs1041788971 1594 dbSNP
rs890767600 1596 dbSNP
rs1424178438 1601 dbSNP
rs1451486861 1602 dbSNP
rs772937980 1604 dbSNP
rs1039624122 1606 dbSNP
rs899751214 1607 dbSNP
rs1487013289 1614 dbSNP
rs1259259323 1615 dbSNP
rs760523957 1616 dbSNP
rs770745514 1622 dbSNP
rs1443405638 1623 dbSNP
rs776453787 1630 dbSNP
rs759213077 1633 dbSNP
rs1237414259 1634 dbSNP
rs1320541004 1635 dbSNP
rs887874519 1635 dbSNP
rs1004948130 1637 dbSNP
rs1351332225 1639 dbSNP
rs1225329251 1640 dbSNP
rs1338515731 1644 dbSNP
rs764850845 1645 dbSNP
rs1448966982 1647 dbSNP
rs1003074265 1666 dbSNP
rs377023830 1667 dbSNP
rs1411599923 1670 dbSNP
rs573058460 1673 dbSNP
rs981435014 1676 dbSNP
rs1401010143 1683 dbSNP
rs1245268883 1685 dbSNP
rs1476576346 1692 dbSNP
rs1034640567 1695 dbSNP
rs749248611 1700 dbSNP
rs540822898 1704 dbSNP
rs1456600383 1708 dbSNP
rs1181193576 1711 dbSNP
rs990731581 1716 dbSNP
rs1472240399 1719 dbSNP
rs181762685 1726 dbSNP
rs1237273691 1730 dbSNP
rs1021352843 1731 dbSNP
rs914717181 1748 dbSNP
rs186259475 1751 dbSNP
rs1198538413 1752 dbSNP
rs977220962 1756 dbSNP
rs1292062962 1757 dbSNP
rs572319908 1760 dbSNP
rs1378642105 1762 dbSNP
rs943739005 1764 dbSNP
rs1171284443 1765 dbSNP
rs954649581 1771 dbSNP
rs1470531909 1776 dbSNP
rs983354483 1784 dbSNP
rs1407924654 1794 dbSNP
rs763433435 1798 dbSNP
rs1463957543 1800 dbSNP
rs1039340836 1803 dbSNP
rs899761009 1804 dbSNP
rs931209287 1808 dbSNP
rs1335794108 1809 dbSNP
rs134981 1813 dbSNP
rs1441974020 1819 dbSNP
rs1273058604 1826 dbSNP
rs78437722 1845 dbSNP
rs1456775543 1851 dbSNP
rs1248541459 1868 dbSNP
rs754763887 1881 dbSNP
rs886972803 1883 dbSNP
rs1264707828 1897 dbSNP
rs35881287 1898 dbSNP
rs1354181668 1912 dbSNP
rs1308213740 1913 dbSNP
rs1444486808 1916 dbSNP
rs948901606 1926 dbSNP
rs4822727 1927 dbSNP
rs907284477 1933 dbSNP
rs928797278 1938 dbSNP
rs1002878900 1940 dbSNP
rs1381323045 1941 dbSNP
rs1438207235 1942 dbSNP
rs1053284523 1947 dbSNP
rs750659427 1961 dbSNP
rs1192247699 1964 dbSNP
rs1439681825 1966 dbSNP
rs575888430 1970 dbSNP
rs1219116356 1974 dbSNP
rs1488704047 1975 dbSNP
rs190635816 1989 dbSNP
rs756264229 2011 dbSNP
rs1268888494 2014 dbSNP
rs546811990 2017 dbSNP
rs544606761 2021 dbSNP
rs780065073 2023 dbSNP
rs1359568263 2024 dbSNP
rs182017277 2027 dbSNP
rs529011685 2029 dbSNP
rs1168131926 2035 dbSNP
rs77461683 2056 dbSNP
rs996326202 2064 dbSNP
rs977984111 2066 dbSNP
rs912350047 2076 dbSNP
rs1411195778 2078 dbSNP
rs1300729672 2083 dbSNP
rs954509086 2083 dbSNP
rs965057634 2084 dbSNP
rs143229044 2091 dbSNP
rs1214687993 2092 dbSNP
rs1405410857 2098 dbSNP
rs920908507 2099 dbSNP
rs568476649 2100 dbSNP
rs539052539 2101 dbSNP
rs1310305804 2105 dbSNP
rs1338085548 2107 dbSNP
rs1226388333 2111 dbSNP
rs1339234009 2115 dbSNP
rs1271030264 2116 dbSNP
rs961682724 2116 dbSNP
rs1397363609 2118 dbSNP
rs530616311 2124 dbSNP
rs1048336630 2126 dbSNP
rs919917222 2127 dbSNP
rs771952265 2138 dbSNP
rs1173450721 2142 dbSNP
rs566868686 2146 dbSNP
rs1291061209 2153 dbSNP
rs1422985143 2161 dbSNP
rs1191335109 2163 dbSNP
rs1425710573 2166 dbSNP
rs1256610915 2172 dbSNP
rs939909936 2175 dbSNP
rs1046224688 2190 dbSNP
rs1259958109 2194 dbSNP
rs534123621 2195 dbSNP
rs555964162 2196 dbSNP
rs1255553590 2197 dbSNP
rs1225318985 2202 dbSNP
rs1246542081 2206 dbSNP
rs1002929798 2210 dbSNP
rs1311557788 2235 dbSNP
rs1055821757 2237 dbSNP
rs1261511222 2239 dbSNP
rs1380999020 2243 dbSNP
rs894499162 2253 dbSNP
rs1194312085 2254 dbSNP
rs1373349635 2263 dbSNP
rs1399689316 2266 dbSNP
rs9613189 2270 dbSNP
rs1459496193 2272 dbSNP
rs1476156161 2274 dbSNP
rs1164308350 2285 dbSNP
rs1161136561 2290 dbSNP
rs1053314632 2293 dbSNP
rs1011978363 2298 dbSNP
rs1364362636 2300 dbSNP
rs913450942 2307 dbSNP
rs947045670 2314 dbSNP
rs1425243049 2326 dbSNP
rs1211179762 2327 dbSNP
rs1356438054 2333 dbSNP
rs1264533733 2335 dbSNP
rs1042768209 2338 dbSNP
rs1021911056 2343 dbSNP
rs968030974 2345 dbSNP
rs999033755 2347 dbSNP
rs375844287 2351 dbSNP
rs544668537 2352 dbSNP
rs9625032 2358 dbSNP
rs556711733 2369 dbSNP
rs1278494571 2377 dbSNP
rs1388635719 2383 dbSNP
rs777734839 2385 dbSNP
rs746902000 2386 dbSNP
rs1422929231 2388 dbSNP
rs1381942514 2391 dbSNP
rs1158966999 2392 dbSNP
rs1438840169 2393 dbSNP
rs532025998 2393 dbSNP
rs1381503605 2395 dbSNP
rs770870253 2397 dbSNP
rs1266001475 2416 dbSNP
rs952448450 2421 dbSNP
rs1473322948 2422 dbSNP
rs1219840422 2425 dbSNP
rs375297738 2427 dbSNP
rs1286265831 2428 dbSNP
rs1014850132 2442 dbSNP
rs1416149750 2446 dbSNP
rs78536867 2449 dbSNP
rs753740257 2450 dbSNP
rs186315739 2455 dbSNP
rs1399066008 2458 dbSNP
rs34396783 2466 dbSNP
rs995153211 2466 dbSNP
rs1236005628 2467 dbSNP
rs140942811 2471 dbSNP
rs908459511 2472 dbSNP
rs939900288 2473 dbSNP
rs769844960 2474 dbSNP
rs1046277241 2475 dbSNP
rs1228601875 2476 dbSNP
rs1287376258 2478 dbSNP
rs1347919184 2484 dbSNP
rs190854539 2485 dbSNP
rs781280511 2488 dbSNP
rs1278730515 2489 dbSNP
rs1027014804 2496 dbSNP
rs775514243 2514 dbSNP
rs150843922 2518 dbSNP
rs1255789204 2525 dbSNP
rs1484268124 2528 dbSNP
rs780374673 2534 dbSNP
rs1363504775 2540 dbSNP
rs1468651315 2549 dbSNP
rs1305129818 2559 dbSNP
rs1174272867 2560 dbSNP
rs749701497 2562 dbSNP
rs149764032 2563 dbSNP
rs778682484 2577 dbSNP
rs747766013 2584 dbSNP
rs755011208 2587 dbSNP
rs762805603 2591 dbSNP
rs145696489 2592 dbSNP
rs148911336 2595 dbSNP
rs960208140 2599 dbSNP
rs760636378 2606 dbSNP
rs1274882701 2610 dbSNP
rs763912440 2613 dbSNP
rs771035863 2614 dbSNP
rs375290632 2615 dbSNP
rs1234170776 2620 dbSNP
rs1446808764 2624 dbSNP
rs759436489 2626 dbSNP
rs894543435 2627 dbSNP
rs1344748963 2632 dbSNP
rs1206386346 2633 dbSNP
rs1250270631 2634 dbSNP
rs565807758 2637 dbSNP
rs35869349 2638 dbSNP
rs1436256857 2639 dbSNP
rs1202709066 2641 dbSNP
rs1201312732 2642 dbSNP
rs369881723 2648 dbSNP
rs1346254236 2649 dbSNP
rs1247345258 2655 dbSNP
rs1453914272 2656 dbSNP
rs751740130 2657 dbSNP
rs1221835056 2660 dbSNP
rs372424588 2661 dbSNP
rs540030929 2664 dbSNP
rs767537316 2665 dbSNP
rs750551577 2668 dbSNP
rs377035333 2674 dbSNP
rs374824076 2677 dbSNP
rs1323860629 2678 dbSNP
rs780603679 2681 dbSNP
rs754137855 2684 dbSNP
rs903442111 2687 dbSNP
rs755309325 2690 dbSNP
rs1367895212 2694 dbSNP
rs1174137097 2695 dbSNP
rs1229787407 2696 dbSNP
rs1466773549 2697 dbSNP
rs1251063372 2698 dbSNP
rs561892979 2701 dbSNP
rs1211831177 2712 dbSNP
rs1423656180 2715 dbSNP
rs1290945567 2717 dbSNP
rs747793282 2718 dbSNP
rs1474183780 2730 dbSNP
rs774060606 2734 dbSNP
rs1480501641 2735 dbSNP
rs771869605 2740 dbSNP
rs529091667 2741 dbSNP
rs761492457 2741 dbSNP
rs759264286 2743 dbSNP
rs770375094 2751 dbSNP
rs1164928033 2767 dbSNP
rs550219010 2775 dbSNP
rs1202308777 2784 dbSNP
rs1019808790 2793 dbSNP
rs1320129043 2810 dbSNP
rs182608238 2813 dbSNP
rs901380590 2815 dbSNP
rs1258751929 2824 dbSNP
rs188008526 2825 dbSNP
rs1337632090 2826 dbSNP
rs1289238942 2835 dbSNP
rs1448530451 2839 dbSNP
rs562544500 2840 dbSNP
rs931606496 2840 dbSNP
rs1028114328 2842 dbSNP
rs1386823765 2845 dbSNP
rs1400395458 2846 dbSNP
rs11703142 2851 dbSNP
rs952531134 2856 dbSNP
rs1407699054 2862 dbSNP
rs890170063 2863 dbSNP
rs983813064 2874 dbSNP
rs1473358900 2880 dbSNP
rs769478816 2882 dbSNP
rs1336379396 2884 dbSNP
rs191581526 2891 dbSNP
rs117898810 2893 dbSNP
rs1459433107 2895 dbSNP
rs1238884668 2900 dbSNP
rs982048723 2905 dbSNP
rs927852755 2910 dbSNP
rs1292347408 2931 dbSNP
rs371732902 2937 dbSNP
rs1358499388 2938 dbSNP
rs1312561841 2940 dbSNP
rs937860765 2942 dbSNP
rs762497462 2946 dbSNP
rs915999541 2948 dbSNP
rs779056094 2954 dbSNP
rs1043073539 2959 dbSNP
rs1351094911 2960 dbSNP
rs1323834284 2964 dbSNP
rs1343368128 2967 dbSNP
rs1295002580 2977 dbSNP
rs534540520 2978 dbSNP
rs1441918989 2980 dbSNP
rs879597117 2986 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aaGGUGACGAU---GUUGGAGGGUCu 5'
            :|||| | |   | :|||||||| 
Target 5' -cUCACUACAACCUCUGCCUCCCAG- 3'
1 - 24
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions Prostate Tissue
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRX1760630. RNA binding protein: AGO2. Condition:AGO-CLIP-22RV1_A ...

- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.).

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aaggugacgauguuGGAGGGUCu 5'
                        |||||||| 
Target 5' --------------CCUCCCAGg 3'
1 - 9
Article - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al.
- Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000215917.7 | 3UTR | CUCACUACAACCUCUGCCUCCCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
HNSC -0.319 0.4 -0.500 0.33 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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