pre-miRNA Information
pre-miRNA hsa-mir-3160-1   
Genomic Coordinates chr11: 46451805 - 46451889
Description Homo sapiens miR-3160-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3160-2   
Genomic Coordinates chr11: 46451807 - 46451887
Description Homo sapiens miR-3160-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3160-3p
Sequence 54| AGAGCUGAGACUAGAAAGCCCA |75
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30582333 1 COSMIC
COSN1535547 3 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1396368683 1 dbSNP
rs1162409303 2 dbSNP
rs1404378453 12 dbSNP
rs1171960732 14 dbSNP
rs1324633375 16 dbSNP
rs1187765019 16 dbSNP
rs1300058326 19 dbSNP
rs1432898407 21 dbSNP
rs1011279103 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SETD3   
Synonyms C14orf154
Description SET domain containing 3
Transcript NM_032233   
Other Transcripts NM_199123   
Expression
Putative miRNA Targets on SETD3
3'UTR of SETD3
(miRNA target sites are highlighted)
>SETD3|NM_032233|3'UTR
   1 CTCGAGGTGAAGCTGGATGGGGGATCCAGTGGAGCAGGAGTTGACGGACAGTCCGTTCACATCGCTGTGTTTCCTTGTTA
  81 ACATTTTTCTTTCTGCAGAGAGGAAGATATGTTTTTGCTGCTTTATATAAAAATGGTTTTTTTAAGTTATTTTAAAAATC
 161 TAGCTTCCCTTTTTGATTAAGATTGCCATCTTGCTTTTAGGCAAAACAAACCAATTAACAAACAACCACAAGAAAGGGAG
 241 AAGAGGTGCCTGTGGGAGATTTTGCAGACCTATTGTGGGTATAGGTATTTTCTTCCTGGGGAAGAATTCAGTTCCCGTCT
 321 CAGCTGTACTTTTGTGGGCCTGTCATCTTGATGACCAGAATGAAAGCTTGCTCTGCCTCCTGCCAGCCAGAATTGGTGGC
 401 GGGACTTGGGGATACAGCGTGAAGGTGGGGAAGTTGCACAGCAGAAAACAGAATTGAAGTTGGGAAACTCTAGAGTCTGG
 481 GCAAAATGTTTGGTTTTTTCTCTTAAAAAAAATAACACCCCATTACCAAAAGAAAAGGTAAGGTGGCAACCTTATTTTTA
 561 ATAGTTTGAAATGATGATAATCCTAATTATATAAAAATATATATATAAACACACATATATATAGTGATTTCTAAAGATTT
 641 GTTTACTTTTGTGTTTTGTTTTACTGTACTAAGAACTTGTCCTTTCTCCTTGAATCAAAGTAGGACATGCATCATCCTCC
 721 TAATTTTAAATGTTGGCTCTGATTTTAAAGTGGTGCATTTGATTCCAGCCTTGGTAATGGAGAGTTTGCAAACACACAGC
 801 GGCCCACAGCTTCACGTGGTGGTGTGCAGTGTGAGGCAGCTCCTTGGCTTTCCTGGTTTTCACAACAAGCTAGAGATTTT
 881 CAAAGCTACACTTTTGAGTAAAAACCCTTATTAAAAGAAAAACATGATTAATAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acccgaAAGAUCAGAGUCGAga 5'
                |||  |||||||||  
Target 5' attcagTTCCCGTCTCAGCTgt 3'
306 - 327 144.00 -15.30
2
miRNA  3' acccgAAAGAUCAGAGUCGAGa 5'
               |||: | | |::|||| 
Target 5' cctaaTTTTAAATGTTGGCTCt 3'
719 - 740 125.00 -6.70
3
miRNA  3' acccgaaagaucagaGUCGAGa 5'
                         |||||| 
Target 5' gtgtgcagtgtgaggCAGCTCc 3'
822 - 843 120.00 -10.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30449683 3 COSMIC
COSN24304978 14 COSMIC
COSN30689234 23 COSMIC
COSN26668366 31 COSMIC
COSN30140604 45 COSMIC
COSN31532249 48 COSMIC
COSN30498658 52 COSMIC
COSN30469649 54 COSMIC
COSN26994403 55 COSMIC
COSN31536372 57 COSMIC
COSN17564248 136 COSMIC
COSN31566440 138 COSMIC
COSN7036175 444 COSMIC
COSN31566857 639 COSMIC
COSN22714129 686 COSMIC
COSN31573203 800 COSMIC
COSN30540258 820 COSMIC
COSN31484667 848 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs369903929 3 dbSNP
rs750838124 4 dbSNP
rs1447516169 5 dbSNP
rs767888707 6 dbSNP
rs750967808 13 dbSNP
rs763711950 16 dbSNP
rs762611042 17 dbSNP
rs775279149 19 dbSNP
rs769613116 23 dbSNP
rs1385577281 24 dbSNP
rs34814044 24 dbSNP
rs779737811 25 dbSNP
rs759232753 26 dbSNP
rs776503920 29 dbSNP
rs199804307 34 dbSNP
rs367631983 35 dbSNP
rs778910078 40 dbSNP
rs768711755 43 dbSNP
rs1034180456 45 dbSNP
rs76524529 46 dbSNP
rs1313813687 51 dbSNP
rs558300652 54 dbSNP
rs1046690626 55 dbSNP
rs995612575 56 dbSNP
rs1209676436 58 dbSNP
rs534882940 63 dbSNP
rs1174903911 64 dbSNP
rs1172727424 65 dbSNP
rs1249226921 66 dbSNP
rs1420193224 67 dbSNP
rs1465115738 84 dbSNP
rs971292003 90 dbSNP
rs1393626081 103 dbSNP
rs1434545283 106 dbSNP
rs1037938680 108 dbSNP
rs943639253 114 dbSNP
rs1377464990 117 dbSNP
rs1024910579 124 dbSNP
rs1297663820 127 dbSNP
rs910690922 135 dbSNP
rs1051888134 136 dbSNP
rs933379556 143 dbSNP
rs1375375423 144 dbSNP
rs34151950 145 dbSNP
rs1174941293 149 dbSNP
rs1473832518 151 dbSNP
rs1253034137 152 dbSNP
rs1311428260 156 dbSNP
rs111982663 157 dbSNP
rs988152642 161 dbSNP
rs1233242123 166 dbSNP
rs549058604 168 dbSNP
rs892492514 201 dbSNP
rs958309149 203 dbSNP
rs925173452 206 dbSNP
rs1231812896 211 dbSNP
rs769191529 218 dbSNP
rs980660296 225 dbSNP
rs548609517 226 dbSNP
rs747347789 226 dbSNP
rs969309953 248 dbSNP
rs1454250459 253 dbSNP
rs1482974092 254 dbSNP
rs529297352 268 dbSNP
rs996406168 272 dbSNP
rs183992119 279 dbSNP
rs191823938 287 dbSNP
rs1463545812 295 dbSNP
rs1324004426 300 dbSNP
rs150681320 316 dbSNP
rs1440098652 317 dbSNP
rs1303860757 320 dbSNP
rs112519989 321 dbSNP
rs1013429626 326 dbSNP
rs183411693 329 dbSNP
rs951161581 334 dbSNP
rs1212408593 338 dbSNP
rs527481513 341 dbSNP
rs1025843453 344 dbSNP
rs1226344348 352 dbSNP
rs940350061 355 dbSNP
rs907572398 360 dbSNP
rs561810898 369 dbSNP
rs1468387036 379 dbSNP
rs112028289 381 dbSNP
rs1248785063 386 dbSNP
rs541899091 388 dbSNP
rs1334419777 390 dbSNP
rs1395045760 400 dbSNP
rs1039355703 401 dbSNP
rs1420441520 403 dbSNP
rs930398032 412 dbSNP
rs780738886 418 dbSNP
rs1459325778 419 dbSNP
rs34348846 422 dbSNP
rs889368732 428 dbSNP
rs1393908879 429 dbSNP
rs927091320 433 dbSNP
rs1051876059 439 dbSNP
rs1351386060 441 dbSNP
rs1428327809 442 dbSNP
rs933518017 446 dbSNP
rs1413322852 449 dbSNP
rs971261084 450 dbSNP
rs1362141494 469 dbSNP
rs1220107804 472 dbSNP
rs1158976043 475 dbSNP
rs1290893950 482 dbSNP
rs576115764 493 dbSNP
rs1214837208 500 dbSNP
rs989172097 505 dbSNP
rs1445805362 508 dbSNP
rs1215429360 511 dbSNP
rs1370503798 512 dbSNP
rs111691428 513 dbSNP
rs1243068617 513 dbSNP
rs1489385625 513 dbSNP
rs1475605973 514 dbSNP
rs1423424227 516 dbSNP
rs1415829479 518 dbSNP
rs956722825 518 dbSNP
rs1052972604 520 dbSNP
rs1360997856 525 dbSNP
rs769837913 527 dbSNP
rs1310744183 528 dbSNP
rs1210657671 537 dbSNP
rs1354449461 540 dbSNP
rs1233318436 542 dbSNP
rs1465343745 544 dbSNP
rs1267435621 545 dbSNP
rs1223772888 550 dbSNP
rs1285389419 568 dbSNP
rs1356341793 574 dbSNP
rs936788340 581 dbSNP
rs1208974682 582 dbSNP
rs1257019686 584 dbSNP
rs925247407 589 dbSNP
rs968141966 590 dbSNP
rs562431005 592 dbSNP
rs1231267543 598 dbSNP
rs538205534 600 dbSNP
rs578216479 601 dbSNP
rs1421232883 602 dbSNP
rs1005580674 603 dbSNP
rs558150738 608 dbSNP
rs886072745 608 dbSNP
rs1049208507 616 dbSNP
rs1396261225 616 dbSNP
rs1462589350 616 dbSNP
rs1333547308 618 dbSNP
rs569282696 618 dbSNP
rs1310693017 621 dbSNP
rs1044156030 624 dbSNP
rs1280074495 624 dbSNP
rs927059999 624 dbSNP
rs930373200 624 dbSNP
rs949872092 629 dbSNP
rs1202463029 633 dbSNP
rs535263373 645 dbSNP
rs572551101 646 dbSNP
rs917112502 649 dbSNP
rs1437362628 650 dbSNP
rs1182643972 654 dbSNP
rs988708885 657 dbSNP
rs778796008 658 dbSNP
rs1399413388 663 dbSNP
rs1191451024 664 dbSNP
rs555446301 665 dbSNP
rs1164177861 668 dbSNP
rs1025491657 681 dbSNP
rs1393665437 689 dbSNP
rs968069018 707 dbSNP
rs1383613877 711 dbSNP
rs1029063918 722 dbSNP
rs1439363521 723 dbSNP
rs974863149 729 dbSNP
rs781095114 734 dbSNP
rs1249474757 737 dbSNP
rs1303115278 737 dbSNP
rs1235659533 739 dbSNP
rs974198158 742 dbSNP
rs1268586411 750 dbSNP
rs1226427707 753 dbSNP
rs1339012580 755 dbSNP
rs966192993 770 dbSNP
rs1019539022 772 dbSNP
rs1005097020 784 dbSNP
rs886710045 791 dbSNP
rs1027294812 795 dbSNP
rs759096013 799 dbSNP
rs962443520 800 dbSNP
rs535518821 801 dbSNP
rs1474881437 812 dbSNP
rs569393560 815 dbSNP
rs889357438 816 dbSNP
rs8402 819 dbSNP
rs1209010875 821 dbSNP
rs1392105062 825 dbSNP
rs997677108 828 dbSNP
rs144120818 835 dbSNP
rs539429509 839 dbSNP
rs1219536955 848 dbSNP
rs892605302 862 dbSNP
rs1332819554 863 dbSNP
rs1231356380 867 dbSNP
rs1052631327 872 dbSNP
rs1488784709 875 dbSNP
rs1053379605 883 dbSNP
rs1259418035 889 dbSNP
rs1363858834 906 dbSNP
rs936719946 908 dbSNP
rs903943762 910 dbSNP
rs879116282 915 dbSNP
rs1194023957 917 dbSNP
rs1294718173 922 dbSNP
rs1473969955 924 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acccgaaaGAUCAGAGUCGAGa 5'
                  || || ||||||| 
Target 5' -------aCU-GUGUCAGCUCa 3'
1 - 14
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000331768.5 | 3UTR | ACUGUGUCAGCUCACUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
118 hsa-miR-3160-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066658 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT075318 SF3B3 splicing factor 3b subunit 3 2 4
MIRT077083 EIF1 eukaryotic translation initiation factor 1 2 2
MIRT100381 HSPA1B heat shock protein family A (Hsp70) member 1B 2 6
MIRT135259 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT184913 ZNF268 zinc finger protein 268 2 2
MIRT218862 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT446580 FPR2 formyl peptide receptor 2 2 2
MIRT448834 FGD4 FYVE, RhoGEF and PH domain containing 4 2 2
MIRT449455 RNF13 ring finger protein 13 2 2
MIRT452284 CARD8 caspase recruitment domain family member 8 2 2
MIRT452628 FAM162A family with sequence similarity 162 member A 2 2
MIRT453454 GLG1 golgi glycoprotein 1 2 2
MIRT454188 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454434 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454575 NT5DC3 5'-nucleotidase domain containing 3 2 2
MIRT455555 TRAF1 TNF receptor associated factor 1 2 6
MIRT455841 MPL MPL proto-oncogene, thrombopoietin receptor 2 6
MIRT455969 BCAS4 breast carcinoma amplified sequence 4 2 4
MIRT456805 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457320 DUSP19 dual specificity phosphatase 19 2 2
MIRT457366 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457684 ZNF587 zinc finger protein 587 2 2
MIRT458158 LYRM4 LYR motif containing 4 2 6
MIRT458641 SGPP2 sphingosine-1-phosphate phosphatase 2 2 2
MIRT459134 FADS6 fatty acid desaturase 6 2 2
MIRT459153 NARF nuclear prelamin A recognition factor 2 4
MIRT460460 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460974 STK17B serine/threonine kinase 17b 2 2
MIRT461439 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT461507 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 2 2
MIRT462490 GSR glutathione-disulfide reductase 2 2
MIRT462638 PHF5A PHD finger protein 5A 2 2
MIRT463279 ZFX zinc finger protein, X-linked 2 2
MIRT463360 ZFAND4 zinc finger AN1-type containing 4 2 2
MIRT465777 TMOD3 tropomodulin 3 2 2
MIRT466143 TMEM120B transmembrane protein 120B 2 2
MIRT468401 SETD3 SET domain containing 3 2 2
MIRT468998 RNPS1 RNA binding protein with serine rich domain 1 2 2
MIRT471574 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT472108 NME2 NME/NM23 nucleoside diphosphate kinase 2 2 2
MIRT472125 NME1-NME2 NME1-NME2 readthrough 2 2
MIRT473020 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT473083 MORN4 MORN repeat containing 4 2 2
MIRT475598 HMGB2 high mobility group box 2 2 4
MIRT475937 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476117 GPR157 G protein-coupled receptor 157 2 2
MIRT476406 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT478003 DNAL1 dynein axonemal light chain 1 2 2
MIRT487969 IQSEC2 IQ motif and Sec7 domain 2 2 2
MIRT489418 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491522 IL10RA interleukin 10 receptor subunit alpha 2 2
MIRT492673 PLEC plectin 2 2
MIRT493545 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT513085 USP9X ubiquitin specific peptidase 9, X-linked 2 2
MIRT514009 CECR2 CECR2, histone acetyl-lysine reader 2 4
MIRT516683 ZNF860 zinc finger protein 860 2 2
MIRT518392 ZNF250 zinc finger protein 250 2 2
MIRT522683 LUZP1 leucine zipper protein 1 2 6
MIRT524488 CEP97 centrosomal protein 97 2 2
MIRT527457 CLEC12B C-type lectin domain family 12 member B 2 2
MIRT527705 IL17REL interleukin 17 receptor E like 2 2
MIRT531647 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT532381 UMPS uridine monophosphate synthetase 2 2
MIRT532588 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 2 2
MIRT533555 TPM4 tropomyosin 4 2 2
MIRT548371 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 4
MIRT550250 PVR poliovirus receptor 2 2
MIRT552555 ZFP36L2 ZFP36 ring finger protein like 2 2 4
MIRT554113 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT554131 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT561344 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT561638 RUNX3 runt related transcription factor 3 2 2
MIRT566497 PBX2P1 PBX homeobox 2 pseudogene 1 2 2
MIRT570583 OTUD7B OTU deubiquitinase 7B 2 2
MIRT572731 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT574041 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT575231 Fut1 fucosyltransferase 1 2 2
MIRT606811 BICD2 BICD cargo adaptor 2 2 2
MIRT621016 CLSTN3 calsyntenin 3 2 2
MIRT637852 PDCL3 phosducin like 3 2 2
MIRT640477 ZNF557 zinc finger protein 557 2 2
MIRT642827 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT643887 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT664874 PCNXL2 pecanex homolog 2 2 2
MIRT680528 PRIM2 DNA primase subunit 2 2 2
MIRT680648 KIAA1456 KIAA1456 2 2
MIRT680807 ZNF578 zinc finger protein 578 2 2
MIRT680921 STX2 syntaxin 2 2 2
MIRT681112 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT681147 INTS7 integrator complex subunit 7 2 2
MIRT681966 TFCP2 transcription factor CP2 2 2
MIRT684316 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT684906 GSG2 histone H3 associated protein kinase 2 2
MIRT685499 MED16 mediator complex subunit 16 2 2
MIRT685929 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686875 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688204 FNIP1 folliculin interacting protein 1 2 2
MIRT688791 CCNB1 cyclin B1 2 2
MIRT689227 RPS19 ribosomal protein S19 2 2
MIRT690470 ZNF33A zinc finger protein 33A 2 2
MIRT691982 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 2 2
MIRT694006 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694529 TRIM72 tripartite motif containing 72 2 2
MIRT695420 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT695784 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT697799 UBXN2A UBX domain protein 2A 2 2
MIRT698275 TMEM2 transmembrane protein 2 2 2
MIRT698317 TMEM136 transmembrane protein 136 2 2
MIRT699971 RREB1 ras responsive element binding protein 1 2 2
MIRT700717 PNO1 partner of NOB1 homolog 2 2
MIRT701721 MTMR12 myotubularin related protein 12 2 2
MIRT701879 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT702959 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT706178 ZNF716 zinc finger protein 716 2 2
MIRT706463 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT718154 TTC33 tetratricopeptide repeat domain 33 2 2
MIRT718711 ANKRD18A ankyrin repeat domain 18A 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3160-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3160-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-3160-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3160-3p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-3160-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3160-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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