miRTarBase - #MIRT468482


—
pre-miRNA Information
pre-miRNA hsa-mir-6509   
Genomic Coordinates chr7: 135206994 - 135207078
Description Homo sapiens miR-6509 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6509-3p
Sequence 52| UUCCACUGCCACUACCUAAUUU |73
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs778601614 1 dbSNP
rs754554776 3 dbSNP
rs767798995 3 dbSNP
rs145322812 4 dbSNP
rs773941257 5 dbSNP
rs768273593 9 dbSNP
rs984565062 12 dbSNP
rs748872915 13 dbSNP
rs774861125 14 dbSNP
rs13241975 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SESN3   
Synonyms SEST3
Description sestrin 3
Transcript NM_144665   
Expression
Putative miRNA Targets on SESN3
3'UTR of SESN3
(miRNA target sites are highlighted)		 
>SESN3|NM_144665|3'UTR
   1 AGTATCACCCAAGGAAAATGTCATACATGTGTAAAGACCTTTCACATAAGATAAACATTGAAGCTATTTGTGATATAGCA
  81 TCAAAAATTATTCAGTTCTCTAGTGTCAAAGTTTAGCCGTTTGTTTTTTTTTTTTTGTTTTTTGCGGCTGTAATGTGCAA
 161 TGATGTGTTTTATTTTCCTTGATGCTTAACATTACTAACAATTGCAAAAATAATACTGAGGAGCACTACTTTGCATTGTT
 241 TGTAGTTGGAGTTTTGGATACTGATCATAAATCATGAATCTGGCGTATTAATGCTTAACTTCAGCGCCTTTGGGTTGTGT
 321 GTATGTGTATTTTTTCTCCCCCCACCCCGCCCTTTTTTTTTTAAGAATAAGGACAAGTGCTTACAATCTGCTCAAGCAAT
 401 TGTTTTTCAGATATTGGAATTCAGCAAAGAGTGACCTCTCTGGCCATTCTAAAACTTTAATGTTGTGTCCTAAATCTGGT
 481 GGAGGAAAAGCATGCGCTGTTGAACCAAGCTGCTCACTGGACACATATTTGTGTCCCCAGGAGATTATTTGTCAGGCACT
 561 GTTTTTTATTTGTTTGTTTGTTCATTTATTGTTGTTTTACTGCTATTGGCGATAACATGAAATGTGATACAGCTATTGCC
 641 CATAATTTAATGTGAAATTAATCATGATGAATTCTATAGCATGCTACTGAAATGCCAAATTCAGCTATTTTCTTTCTCTT
 721 CTAAAATGGAAGTTTCAGTTTTCCATATCAGATGTATATAAGTGGAATTATAACACAATCCTATCACTGACAGTAATCCT
 801 CAGTCACCTTAAATAATCAGTGCTCACAGTGCTGCTTACAGTTCATTTAGTTGGCACATATAAACCTGTACCCACACAAG
 881 ACTGACCAAAAATTTTCTTTGCACATTTTTCCTTTCTCATAGTTTTTTTCTATATTTCGTTAAGCAAAGGAAGGTTAATA
 961 TGCCTATTTTTCCTGTTAGGCTTTTAGAAATTATTTTCCATGACTTTTGTTCTTATAATAGGTTAGACAGTTTATTTTTC
1041 AAAGGTAAAAATTGTGTTTCTATGCATTAATGTGATTGAACTACAAAAACAGAGTGCAATATGTTCAAAAAATACTCAAC
1121 TAAACTTTCCCCCTGTCATATCACTGCAAAAGTGTCCTTTTAAACAGAGCCATAAAGAAATTTTTTTCAAATTTCTTTAT
1201 TGCACAGGCTTTTTTCAGTTTTACCTTTCTGGGATTGAACAATGTTCCTTTCATAATGCCAAAGCATTCCCTTCCCCAGA
1281 AAAATCTCCTTGGACAACTGGTTTAAAAACGTTATTAAGTCATAGGGGAGGAATAAGCGGCCAAAAAGTCACATTTTTGC
1361 ATTGGTTTACGTTGCTTGATTAGACTATCTTCAGAGAGCACATTATGTGTTTATAGCTTTAATTTGTATTATGTCAATGA
1441 ACCAGTGAAGTGCCTAAAGAGATGCTTACAACTATCCAGTAGGACACAACTGCACTGCTTTTTAAACACTTTTTGGTTAG
1521 TTAAGGGTGACTTGAATTGTACACATACATGCTAATTTTTGAAAACTTATCCATTTTTCATAGTAAATAATATAGATAAA
1601 ATTTTCTGTTAGAGTTCCCGCAAATATTTCATTTTAGACTTACTTGTGATATAAGATTTAACTTTTCTTTTGTGAAAGAA
1681 TCGTGAACTAGTGTTTCATGAAATCATTTTCCTCTTCCATTTATCATCCTCCTCTGGTACAATATATTGGGTTGCTTTCT
1761 TTTAGATTTTGTTCCAGATAGGAAAACAAATATGACTGTATACTTATTAACATAAGGTAGTTCTGCATTTTTGGATTCCA
1841 GGATCCTGTTTGAAATCTTCCATGTGAGGAAAAAATTACTAATATTTTTAAAGACAGGGTGGTTTATTTAAAGAGATTAT
1921 TCAGAGAACTTGTGCCATATCTCGTCTGTTTTATTGCATATGCCATATGTTAACTTTTATTCAATATTACATTATGTAGA
2001 TATGTAATACAAAGAAAATATTTAGGAGAATGGCAAAACACAAATGGCAACATAAATGTCCATTTGACTTACCTAACTTC
2081 ACAACTTTCAAGTTGAGGATGTCATTTATTCTTGAATTTGTTTTTTTACTAGATGCTTTCAATTAATAGCCCTATATTTT
2161 TGTGCAGGCGAACTGTATAACAGGATAAAAAATGATTTGTATGTATTGAAAAGGAGGAGAAATTCTCACAGAACACCATA
2241 TGAGCTTTAGACCAAAAGGGGAAACAAGGTTTAAGTAACTAAAATGGCCACTTAGTTTGTGTTTATTTTTTTCCCTGGAA
2321 ATGTAAGTAGTTGGAGTTTAGGCTATGGAAATATTAGTGCCTTTAATAGATCTCTTTCCTTGCAAAGTTTCTTTTTAGCT
2401 CAGCATTGATCTATCTTATCAATAGGAAAATAAGTTGACTTGGAACTATAAACAAAAACAACACCATATATTTATGAACC
2481 TCAGTGAACCAGCCTAGAAAAATTGACTTCTGCAGGTGCTAAAGCACCTACTAATACGCAGCATGCACAGCATTTCAGGT
2561 TGTGAATACCATTTTACAACGAGTTTGCTGTTAACTCTCTTTATCCAATGCAAACTTGAAATTCTGATGCGGTTTTCCAG
2641 GGTGGTATTTTTTCAGAGTATTGAATTTACTATTTAGTAATTTATAGTATAGCTTTTTATATTAAAATGTGATATTTTTA
2721 AAAGAGATATCTGGTTCAATTGGTATAATGACGTGATTATGCAATATGCTGATCTACACCTTGCGCTCACATTGTGCCAA
2801 ACTTAAATGTGCAAGTGTACGTGAGAAAAGCACATGTGAATGTGAATTCTTTAATTCTTTGCTTATTATGTTAAAATTAG
2881 TCTTCATAGTCCACTGATGTGTATGCTTGAATAATGTCTATTTACTTTGGAATTTCAAGATTTCCAGCTTCAATGGTAAT
2961 TTATAATTTCTCAGATCACCTTAAGAAATATTGAGATACTCTCCCACCTGAAAATAATCTGTTCTTTAACCCACCTGACT
3041 ATGGGAGTAGCCAGGCAGGTGCCTCACTGGCTTCTTCAGACGAGGCTTCCTCAGGTGGATATATGACTATTAGGGGAAAA
3121 GAGGCTTTTGAGACAGCTTATTACCTCCTTCCCCTTTTTGAACTAAGTACATTGTCTCAGTCCCAGTATGAATTTGTCCC
3201 ATTTGGGGTATTTTTAAAATAAAAGATGGCTAACATGGAATCTGGGGCATAGCCTTGGCCTTTAATTATGGTTGTAAGCC
3281 CAAATAATGGCAGAGAAACACAGGGCTGTTTTTACAACAGAAAACTCAATATAAGTTTTATATAAGAATCCTATAAAATT
3361 TGAACCAGAGCTCCTATTTAGTTGTTATAATGTCTCCTAAAGATCTTAAATGCTTCTAAAAGCTAATTATTATTCCAGAG
3441 CAACTTTTTCCTTTTCCCCCTTATAAAGTTTTTTTTTAAATCCAAAATCTTAGATTTCTGTGCCACAGCAAAATAAAATG
3521 ATCAACAATTAAAGATCTGTACTTAAAATAGTACACCATTTTTAGTGGAGGGAGGGTGCATGCCTATATGATGGTAAGAT
3601 TCTTTTGAACTCTAAGGACAATTCCTCATGGAAAAAATAAATTTCAGTGCATATTATAAAAATGATTTGCACTGTGTTAG
3681 CAAAATAAGGTGTTTTAGGTTGTATTTTAAAGACAATTCTAAATCATTTCTCTGGAAAGCAAGACCTTAAATTCTTCTCT
3761 TTAATAGAACTGCTTTTATGCAAAGAGATGGTCTTAACATGGACTAAACAGTACATAACAATAATGTTTGTTATGTAAAT
3841 AGTATATCACATTTGCTTAGTAGCACAATTCAACAGCAGGCTGAAAGTCGTGGCTCCTCTGCTCAGATTGAGTTTTAAGT
3921 TACCTAATTTATGTAATCAGAATCTATTCTAGGTGGCCGTCAACGTAAACTGTGTTTCCCTATTATATCCCTCTGGAGAC
4001 TGAGAATCAAATTAAATAGTCTTTCTTCAAAGCAGTACTGTAACATGAATGTATTTATCTCAGTCAACAGAACTTATATG
4081 CCCACTGTATGTGGAGCTTATTTCAATGCTAATTTGGCTTAGTTAGCAGACCTAGAATCTGCCCAGGTGAGACCTAGAAC
4161 AAAAATAGCTGGGGTGAAATGGATAAGAGAGGTAGAGGTATATGTCAAGGCAGAGCCCTATGAGGAAGGAAGAGTTTTCA
4241 AAGAATATGAGGAACATAGTGCTGAGAGTGTGGCTGCCTTCAGCACCGTACACCTAATCTAGAGAAAATATTTCCCATGT
4321 GGGAGGTCCTGTCTGCATTCAGTCCACCCTTTTCTGCCTGCTTCTTCCTCCAAGTGCCTCAACCTCTACATGCTCACTCT
4401 CCTCCCCTTCCCTCAGCCCATCTTGGTCTAAGCAGCTTTCACAATCCAAACCAAACATCACCAGCCACCCGCTGATAAGT
4481 CACCAGCATTTACTTTCCTGAGTTACTTTTTCTCCATTCATTGAGACTATGGATTCATCCCAACTCCTTCTAAATCCCTC
4561 AACCATCCAGCTATATTTTGGCTAACCTTTGCCCTAGACACTCTACCAGATGTTAATGCAGTATCAAGTGTAAATTGTGT
4641 CACCCTATTCTGTTCTACCCTTTTCCCTGCTGCCGAAATATCTTGCTCTCCTCTACCTCATCCCCAAAGAGCCTATAAAT
4721 TCAGAGTATCCAACCTTTTCATGGATTCACTCACTGTTGTTCAGTAATACAACTTCCATATTTTAAATAAATCATAAAAG
4801 ATTTTTGCCTTCTATCAAAGTAGGAAACTTTATATTTATACATGATACAGAAATTGAACTATTTCTATCGTTCAGAATTT
4881 AGCATATAACAGGATTTTAAAGTGATTGAATTGCCATCCTAACTTGGATTTGTATTAGGTTATGAATGAATACTGTTGTT
4961 AGTCCAAGCTATTTGAATGTAAAGTTAAAATTCTCCAGCAATCCAGAATGACTTGTAACCCTTCAGTGGAATGGGAAATT
5041 TCTGGTATGCAAATAGGGTGGTGTTCCAGACATTTGTTTTATTGGTGGTGTTTGGGCCTTGAAACACATTTCTAATAGAA
5121 TGACATATGGCAAAGGGTATTTAGATGGTCCTATGGGATCACAGAAGCCCATATGATTTAAAATATAGATAAAATAACAC
5201 AAAATTGGGTACATAAGGGTTTAACCAGGCTTTCCTGGGTTAGACTAAGCCTCTAACCTCTGTTCCTATCCTGTTCTTAT
5281 GGGAGGAAAAAAAATGTTCCATGGGATGAAAAGAAAATGCATTGACTTTGTAGTCTTTATTCTCCTAGCCGCACTTCGGG
5361 TATATCCAGAAGGAAGAGGAAATGCAAAGAGGAAGAAGATGTAATAGTTCTTCTCTCCAGCTAGGTGCACTTGAGGTTGT
5441 TCATAAATGTAAAATTATGTCAGGTTTCTAACATGGGACACTGCACACAGTTGTCTGACCTGATGAACCATCCCATTTGA
5521 AAGTATAGATTATTATTATTTCTTGTAGTATTTGGTTGTTTTCCATCTCATTCATGAACAACTCAACCTGATAGTAGTAT
5601 CCAATAAATGCCTTTCAGGGCTCAGGAATGAATTGACATCCTAGTTAAGAAATGAGACTTAATAATGGAGACTGAATGAG
5681 GCGGTTTGTATTAAATTATATGCCATGAAGTGTTCATTTTAGCTTTAACCTAATTATGACTGTACCACCATGAAGTACAG
5761 AATGAAAAATTATATATATGGGGGGGAAACAGAATGAATATCTGATTCTTTTGAATGCTTGTGGAAATCTTTGAGATCGT
5841 GCAGGGCATACCACAAAATAGCCTTTAGAACAGATACCCAATTTTACAGTTCATAGGACAACATCAAACATTAGTAAGTC
5921 TAAATAAGATGAATAGAATTTTTGTTATGTAAATTTTGCTAGAACAGTCTATTTTCTTGCACCCCTCAAGTTAACCTCTT
6001 AAAAAAATGAATGTATAATTTCTACCGAAAGAATATCAGAGAGAATCTCTCTGGCCTATAGTGTTAAAATATTGTTCACA
6081 AATCCTGATTAGTTAAGTGCATACATTATGAAACTTACAGAATAAAACTTATTATACATCTCTTTCTTAAATTAATATCT
6161 TTACACATTTTCAACTGGCTCCCCAAGTCTGATAAGGAAGGATTAAAAGAAAAAAGAAATGTATTAGTTGGGTGGCCAAG
6241 GAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGGTTCTCTAAGGTAAAAGAGTTAAATAGTACCC
6321 TTGTTCACCAAGGAAAGTGATCCAAACTATATATCTAGTGCAGATATTTCCTTTGCATTATTTAGTCTTCTCTGGAGAGA
6401 AAATACAGTTTCCCCTTCCTCTTTCTCTTCACATTTACTCTTTTCAACCCAAAATAAGAGACATAGAAAGCAAACCACAG
6481 CCAGTTTGGCATCTTCTCAGTGCTACTAGTATAGGCACATACACATACACAGTCTCAGCAAGGTTATAAAGAACCCTGTC
6561 AGGTCCACTTGCAACATGGCCTTGCTACTTGGATTAGCTCCTTTAAGCCTGAAAATAACTTTCCTGGTCATGGAAGAACT
6641 GGACGCATCTTTTAACTTATGAAATAGAAGTTGAACTTGAAAACTCTTTTTAAAAAATCCTGGTTTTGCAGGACAGCTAC
6721 ATAATGAATGTATATATTAAGACTGTAGCTGAATTGCACATGAAATCAGATTGCCAACTTCTTGACTTTCAATGTTAGAC
6801 ATTTATCCTTAAGTTGTGAGCGATATATGTAGCATGCTGTGAAATGTCTGTTATAGCTCTTTAATTCATCAGTATTAATA
6881 CAGAATTATCATTTGCGTTTCTTGGTACTTTTTATTCAATGTAATCAGAAGCTGTGATGTTTTGCCTTTGTAGTCCTGTG
6961 CTTTGTTACTGTAATTTTTTTTTTTTTTTTACGAAGCACGTGACTGGACTAATGTAAGGCAGATGACGTGATCTTTAAGA
7041 CTGCTATATATATCAGTCTCTTACTCTATAAGGTTTTAAATTAGAATAAGCTTTTATCAAATAGATAATTGATGCAATTT
7121 AGGATTCACGCAAGTTTCAGTGTCAAATGGCGGTCTTATAGTTTCAATTCTGAAAATAGCAAACTTAATAAACAGCCACT
7201 TTAAACTTGTTCTGGCAAACCAGACCCTGCTGTAGATATAGTCTAAGGTAGTTAACCATATAAGCCTTTTCAACTCTTAA
7281 TGCCCTCCACATGAATCAGCAGTTAAGAAGGTTCTAGAACCCATGAAAGCTTTTGTATGTATTACTAGGTTTTGTTTTTC
7361 TTATGTTTGCTGATTTTACAGTTCTGACTAAAGCTGACCTAAATGGATCAGTTTATGTGTAATATTCTAGTGCTTTAATG
7441 ACTCTTTTTTTCTTTGGAGGGAGGGTAACATTATTTGGACAGATGCAGAAGGAACTGTTAGTGAGTCAAGACAAACACAT
7521 CTGAAATAAAGGAACTGTGTATTAACATGTTAACAATTCATAACTGCACTTTTTATGACATTTTGAAAATCTATTTATAG
7601 GTACAGAACAATGGGTTTTGTTAAACTGTATCACATTTATACTTGCAGAAATTTATTTCATTGTTATTAGTAGGAATTTT
7681 ATTGGTTCAATAAAATTGGCAAAACTGAACACCAATCATTTGCCTACTTTGTTTATACTGGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuuaauccaucaccGUCACCUu 5'
                        ||||||| 
Target 5' gacttgtaacccttCAGTGGAa 3'
 5010 - 5031 140.00 -11.50
2 
miRNA  3' uuuaauccaUCACCGUCACCUu 5'
                   | |  :|||||| 
Target 5' tagtacaccATTTTTAGTGGAg 3'
 3549 - 3570 125.00 -9.10
3 
miRNA  3' uuUAAUC--CAUCACCGUCACCUu 5'
            || ||  ||| |   |||||| 
Target 5' atATCAGATGTA-TATAAGTGGAa 3'
 745 - 767 121.00 -8.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30106066 6 COSMIC
COSN30135230 15 COSMIC
COSN31505864 29 COSMIC
COSN30191903 38 COSMIC
COSN30167888 50 COSMIC
COSN30470754 60 COSMIC
COSN30501753 83 COSMIC
COSN32064487 87 COSMIC
COSN30542816 117 COSMIC
COSN31544847 119 COSMIC
COSN13359177 123 COSMIC
COSN20108637 123 COSMIC
COSN1140046 124 COSMIC
COSN24406150 130 COSMIC
COSN1550788 132 COSMIC
COSN24455827 133 COSMIC
COSN30137300 161 COSMIC
COSN30166400 163 COSMIC
COSN31547263 276 COSMIC
COSN31490939 285 COSMIC
COSN29769177 352 COSMIC
COSN14450814 683 COSMIC
COSN6534330 719 COSMIC
COSN7293156 938 COSMIC
COSN21920043 1700 COSMIC
COSN29803782 2628 COSMIC
COSN25945534 2897 COSMIC
COSN5925036 3387 COSMIC
COSN5312568 3716 COSMIC
COSN8286385 3880 COSMIC
COSN8879635 4348 COSMIC
COSN8879634 5214 COSMIC
COSN15586747 5912 COSMIC
COSN16125040 6026 COSMIC
COSN24230231 6465 COSMIC
COSN8879633 6594 COSMIC
COSN27501971 6974 COSMIC
COSN14984433 7372 COSMIC
COSN7293155 7433 COSMIC
COSN16483282 7518 COSMIC
COSN26709158 7591 COSMIC
rs12361586 4248 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1449768614 2 dbSNP
rs761749019 4 dbSNP
rs374523250 6 dbSNP
rs139887233 9 dbSNP
rs569528 15 dbSNP
rs1290549520 25 dbSNP
rs369821373 27 dbSNP
rs1361647156 28 dbSNP
rs746661727 29 dbSNP
rs1221806990 31 dbSNP
rs1245514368 36 dbSNP
rs1285248076 37 dbSNP
rs1366205675 39 dbSNP
rs666116 40 dbSNP
rs1272230981 41 dbSNP
rs1429087140 42 dbSNP
rs1326253563 43 dbSNP
rs888569163 46 dbSNP
rs1047487500 57 dbSNP
rs537930999 58 dbSNP
rs1210726742 60 dbSNP
rs1461144247 62 dbSNP
rs1042224591 64 dbSNP
rs78754097 66 dbSNP
rs1211064154 76 dbSNP
rs1329957494 83 dbSNP
rs923058200 94 dbSNP
rs1260182536 98 dbSNP
rs1196721233 102 dbSNP
rs558694276 104 dbSNP
rs895834966 109 dbSNP
rs1057040407 112 dbSNP
rs533718772 118 dbSNP
rs1342542214 119 dbSNP
rs1313693534 120 dbSNP
rs879151148 123 dbSNP
rs375839799 124 dbSNP
rs1455704922 127 dbSNP
rs765138028 127 dbSNP
rs1365242325 129 dbSNP
rs1346239404 130 dbSNP
rs559356961 130 dbSNP
rs541147549 131 dbSNP
rs984449351 131 dbSNP
rs1286449901 132 dbSNP
rs370213912 132 dbSNP
rs2155239 133 dbSNP
rs373651256 133 dbSNP
rs373458894 134 dbSNP
rs58831783 134 dbSNP
rs199555368 135 dbSNP
rs1423061687 136 dbSNP
rs72283010 136 dbSNP
rs1012782506 137 dbSNP
rs1491295177 137 dbSNP
rs200346992 137 dbSNP
rs781304580 137 dbSNP
rs878895096 137 dbSNP
rs765972876 138 dbSNP
rs1321917167 139 dbSNP
rs1203270271 140 dbSNP
rs1334630801 141 dbSNP
rs1179823168 144 dbSNP
rs1481946163 144 dbSNP
rs1458708897 145 dbSNP
rs1385541213 146 dbSNP
rs531673061 149 dbSNP
rs1409591033 152 dbSNP
rs976931788 166 dbSNP
rs377168605 172 dbSNP
rs931871594 172 dbSNP
rs1450977622 173 dbSNP
rs964297318 178 dbSNP
rs377140390 179 dbSNP
rs564398765 191 dbSNP
rs1018846513 192 dbSNP
rs1331983498 192 dbSNP
rs1005742245 201 dbSNP
rs1450231733 202 dbSNP
rs1316865555 203 dbSNP
rs1379519983 214 dbSNP
rs888631365 216 dbSNP
rs1025701026 235 dbSNP
rs1308766685 239 dbSNP
rs994262751 243 dbSNP
rs745330742 252 dbSNP
rs1263098607 259 dbSNP
rs1460350214 261 dbSNP
rs902455872 267 dbSNP
rs1238404448 274 dbSNP
rs1475250361 283 dbSNP
rs895782358 284 dbSNP
rs546394010 285 dbSNP
rs1444414044 288 dbSNP
rs1478207428 289 dbSNP
rs1241632759 302 dbSNP
rs770549781 304 dbSNP
rs748568960 305 dbSNP
rs1057191539 306 dbSNP
rs684856 308 dbSNP
rs1429699408 312 dbSNP
rs1358558447 314 dbSNP
rs1363588750 321 dbSNP
rs1218756007 323 dbSNP
rs1282071703 329 dbSNP
rs1266273435 330 dbSNP
rs1245456642 336 dbSNP
rs1322114766 336 dbSNP
rs1206123921 337 dbSNP
rs943147460 340 dbSNP
rs561614296 343 dbSNP
rs1244096902 344 dbSNP
rs984480612 344 dbSNP
rs1488726868 345 dbSNP
rs542538323 348 dbSNP
rs1427284880 349 dbSNP
rs574525728 349 dbSNP
rs556179937 352 dbSNP
rs1399927729 353 dbSNP
rs1315929361 354 dbSNP
rs918857162 355 dbSNP
rs1400219483 362 dbSNP
rs1343108403 363 dbSNP
rs973363550 363 dbSNP
rs970924895 368 dbSNP
rs1043261017 376 dbSNP
rs1380034115 380 dbSNP
rs1392188106 382 dbSNP
rs947217008 384 dbSNP
rs544351143 398 dbSNP
rs667793 401 dbSNP
rs112879526 405 dbSNP
rs752119889 408 dbSNP
rs990988881 413 dbSNP
rs1266970689 414 dbSNP
rs1382977616 426 dbSNP
rs959470626 427 dbSNP
rs1170932590 430 dbSNP
rs1032363930 432 dbSNP
rs1000833763 438 dbSNP
rs1365294870 441 dbSNP
rs902488319 448 dbSNP
rs1156660201 458 dbSNP
rs566941159 461 dbSNP
rs1420020863 480 dbSNP
rs933073655 482 dbSNP
rs577032554 485 dbSNP
rs1269643528 492 dbSNP
rs974410955 494 dbSNP
rs1335746457 495 dbSNP
rs558332913 496 dbSNP
rs1312014860 499 dbSNP
rs1039308725 502 dbSNP
rs911455317 504 dbSNP
rs1489934908 505 dbSNP
rs1277020154 524 dbSNP
rs533998406 525 dbSNP
rs668311 530 dbSNP
rs1361824227 531 dbSNP
rs780371874 533 dbSNP
rs750345239 534 dbSNP
rs887546677 543 dbSNP
rs572902863 545 dbSNP
rs1026236741 547 dbSNP
rs1440109094 553 dbSNP
rs1182716787 562 dbSNP
rs369611027 572 dbSNP
rs1339749048 576 dbSNP
rs1048816565 580 dbSNP
rs1163401234 583 dbSNP
rs749833053 587 dbSNP
rs1395150119 592 dbSNP
rs1407657404 594 dbSNP
rs758532500 596 dbSNP
rs1225091180 597 dbSNP
rs780976939 597 dbSNP
rs1452422315 599 dbSNP
rs1313349499 608 dbSNP
rs928965567 611 dbSNP
rs1303274676 622 dbSNP
rs867698157 624 dbSNP
rs1269760157 626 dbSNP
rs1337554921 630 dbSNP
rs1200559608 631 dbSNP
rs994252783 640 dbSNP
rs778157043 652 dbSNP
rs1202863473 662 dbSNP
rs1241032799 664 dbSNP
rs1425265483 676 dbSNP
rs1187831709 677 dbSNP
rs1372096343 679 dbSNP
rs1410886768 683 dbSNP
rs1419190179 711 dbSNP
rs1401726772 723 dbSNP
rs949695269 728 dbSNP
rs960143805 732 dbSNP
rs1404812889 737 dbSNP
rs1396921242 753 dbSNP
rs1295162850 756 dbSNP
rs1324876277 769 dbSNP
rs1220595977 772 dbSNP
rs918155893 772 dbSNP
rs1318603290 790 dbSNP
rs1222828062 793 dbSNP
rs1254114381 820 dbSNP
rs1479311168 823 dbSNP
rs781339590 834 dbSNP
rs1260659182 838 dbSNP
rs1035677704 844 dbSNP
rs925377744 851 dbSNP
rs1479494667 862 dbSNP
rs750435434 866 dbSNP
rs976003524 886 dbSNP
rs1379835928 900 dbSNP
rs1466909527 901 dbSNP
rs1288630712 902 dbSNP
rs1205419231 904 dbSNP
rs966762539 905 dbSNP
rs1021412564 911 dbSNP
rs554891785 913 dbSNP
rs997507734 923 dbSNP
rs1042949367 927 dbSNP
rs1438207417 928 dbSNP
rs1403129377 930 dbSNP
rs1011916263 933 dbSNP
rs1193828185 938 dbSNP
rs536128071 939 dbSNP
rs1233771955 953 dbSNP
rs1053400510 959 dbSNP
rs1259918778 964 dbSNP
rs933059086 971 dbSNP
rs1017490400 979 dbSNP
rs1218351524 993 dbSNP
rs1283839241 994 dbSNP
rs762124936 998 dbSNP
rs191924818 1000 dbSNP
rs1270153421 1003 dbSNP
rs1038778169 1004 dbSNP
rs1343022957 1009 dbSNP
rs1468952430 1012 dbSNP
rs770769374 1016 dbSNP
rs150664483 1021 dbSNP
rs943010769 1022 dbSNP
rs1421843892 1028 dbSNP
rs1280948634 1031 dbSNP
rs908880039 1031 dbSNP
rs1442430636 1036 dbSNP
rs1048847592 1052 dbSNP
rs754048721 1057 dbSNP
rs1295342449 1062 dbSNP
rs953117860 1063 dbSNP
rs918753262 1069 dbSNP
rs1369715264 1070 dbSNP
rs1387277834 1071 dbSNP
rs1327320630 1072 dbSNP
rs972924564 1072 dbSNP
rs897562713 1074 dbSNP
rs187440208 1078 dbSNP
rs1176251353 1080 dbSNP
rs1479504384 1089 dbSNP
rs1266692810 1090 dbSNP
rs1488483262 1095 dbSNP
rs1035752356 1098 dbSNP
rs183752427 1106 dbSNP
rs1178029922 1115 dbSNP
rs1469854155 1122 dbSNP
rs1441965372 1126 dbSNP
rs552342859 1129 dbSNP
rs970050203 1131 dbSNP
rs1403803834 1133 dbSNP
rs1055343667 1135 dbSNP
rs1167092048 1135 dbSNP
rs527932685 1135 dbSNP
rs1297566316 1138 dbSNP
rs1462487109 1147 dbSNP
rs544035795 1151 dbSNP
rs938190664 1169 dbSNP
rs1202894153 1170 dbSNP
rs1448778329 1171 dbSNP
rs1309695315 1176 dbSNP
rs1011488902 1181 dbSNP
rs1320838310 1198 dbSNP
rs925489560 1202 dbSNP
rs1321816698 1207 dbSNP
rs891736951 1208 dbSNP
rs1256761814 1209 dbSNP
rs1459467344 1231 dbSNP
rs763998678 1242 dbSNP
rs997280724 1243 dbSNP
rs1285790891 1244 dbSNP
rs192428477 1249 dbSNP
rs1471978058 1255 dbSNP
rs1183835088 1258 dbSNP
rs1038727883 1269 dbSNP
rs201258376 1273 dbSNP
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rs371969891 1315 dbSNP
rs1275746358 1319 dbSNP
rs1320705846 1321 dbSNP
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rs187557307 1344 dbSNP
rs547376263 1347 dbSNP
rs1212643425 1361 dbSNP
rs16921487 1370 dbSNP
rs771872918 1371 dbSNP
rs1191679057 1378 dbSNP
rs78046385 1378 dbSNP
rs1446243408 1387 dbSNP
rs539945776 1405 dbSNP
rs1171326223 1407 dbSNP
rs1424327182 1437 dbSNP
rs970585974 1443 dbSNP
rs1021618624 1448 dbSNP
rs894108165 1460 dbSNP
rs762414206 1466 dbSNP
rs1182716442 1468 dbSNP
rs1459960118 1481 dbSNP
rs990580782 1485 dbSNP
rs1295894250 1501 dbSNP
rs938305693 1512 dbSNP
rs925519366 1515 dbSNP
rs1283247428 1525 dbSNP
rs1342293837 1526 dbSNP
rs1243758310 1527 dbSNP
rs773721649 1529 dbSNP
rs1215969533 1531 dbSNP
rs1220542014 1540 dbSNP
rs1278899518 1542 dbSNP
rs956084652 1548 dbSNP
rs1043901202 1550 dbSNP
rs1265126126 1569 dbSNP
rs1488558650 1572 dbSNP
rs1198641546 1579 dbSNP
rs1315741305 1579 dbSNP
rs945518468 1606 dbSNP
rs1193065065 1619 dbSNP
rs573030301 1620 dbSNP
rs1419388807 1621 dbSNP
rs571396324 1623 dbSNP
rs1362883353 1639 dbSNP
rs1420793171 1642 dbSNP
rs114708324 1652 dbSNP
rs944710924 1655 dbSNP
rs748942854 1665 dbSNP
rs1450883468 1682 dbSNP
rs1375668394 1683 dbSNP
rs1237561084 1687 dbSNP
rs1364772831 1688 dbSNP
rs1240467569 1694 dbSNP
rs986125248 1699 dbSNP
rs1354176167 1713 dbSNP
rs951973105 1718 dbSNP
rs1027545672 1736 dbSNP
rs1287647859 1740 dbSNP
rs1289966139 1744 dbSNP
rs1201071559 1752 dbSNP
rs1247413355 1763 dbSNP
rs1430115686 1772 dbSNP
rs1177032418 1787 dbSNP
rs189850569 1788 dbSNP
rs1007303712 1800 dbSNP
rs1440706599 1803 dbSNP
rs887550447 1807 dbSNP
rs1343451544 1813 dbSNP
rs1163111166 1823 dbSNP
rs1389190622 1824 dbSNP
rs1165730287 1828 dbSNP
rs1425576128 1831 dbSNP
rs1048703178 1834 dbSNP
rs551441985 1846 dbSNP
rs752314375 1848 dbSNP
rs115955307 1850 dbSNP
rs897506087 1853 dbSNP
rs1421575364 1857 dbSNP
rs1037251616 1860 dbSNP
rs1186976139 1864 dbSNP
rs938917293 1865 dbSNP
rs1282268056 1879 dbSNP
rs928783959 1883 dbSNP
rs556798651 1885 dbSNP
rs1210396240 1897 dbSNP
rs1239820726 1898 dbSNP
rs1457383406 1901 dbSNP
rs766781691 1903 dbSNP
rs1034000279 1911 dbSNP
rs948815219 1917 dbSNP
rs1244324913 1941 dbSNP
rs185540958 1943 dbSNP
rs914619170 1944 dbSNP
rs1214449250 1949 dbSNP
rs1422213554 1957 dbSNP
rs570754449 1967 dbSNP
rs761185801 1969 dbSNP
rs1332869545 1970 dbSNP
rs1400551833 1974 dbSNP
rs990264136 1980 dbSNP
rs1331913242 1984 dbSNP
rs956201177 1996 dbSNP
rs769030518 1997 dbSNP
rs904125644 2004 dbSNP
rs1031637530 2025 dbSNP
rs1277497832 2030 dbSNP
rs945536957 2045 dbSNP
rs1216863012 2051 dbSNP
rs1305082632 2052 dbSNP
rs892599317 2059 dbSNP
rs1200126420 2061 dbSNP
rs975970543 2072 dbSNP
rs747292246 2076 dbSNP
rs1444505510 2096 dbSNP
rs552681121 2102 dbSNP
rs1188773361 2103 dbSNP
rs1263095841 2108 dbSNP
rs1405611436 2117 dbSNP
rs944846756 2125 dbSNP
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rs1423763680 2135 dbSNP
rs1465194194 2145 dbSNP
rs1017381207 2148 dbSNP
rs780646303 2149 dbSNP
rs534019225 2150 dbSNP
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rs764735962 5262 dbSNP
rs188301445 5271 dbSNP
rs959601196 5273 dbSNP
rs1482933850 5275 dbSNP
rs925309963 5279 dbSNP
rs185438492 5282 dbSNP
rs749999853 5294 dbSNP
rs1241403991 5295 dbSNP
rs1054658079 5303 dbSNP
rs999397869 5311 dbSNP
rs1390343872 5313 dbSNP
rs966628122 5321 dbSNP
rs1020726719 5331 dbSNP
rs1309774695 5340 dbSNP
rs764670144 5350 dbSNP
rs1007993588 5351 dbSNP
rs955249654 5357 dbSNP
rs575665468 5358 dbSNP
rs1028458365 5359 dbSNP
rs1320614801 5360 dbSNP
rs866495467 5374 dbSNP
rs1282285420 5376 dbSNP
rs1374574827 5377 dbSNP
rs193090238 5378 dbSNP
rs776182787 5387 dbSNP
rs1396161849 5391 dbSNP
rs375256292 5391 dbSNP
rs1467409749 5392 dbSNP
rs1400839488 5398 dbSNP
rs909763046 5400 dbSNP
rs1038073996 5401 dbSNP
rs1247775039 5406 dbSNP
rs982655529 5411 dbSNP
rs1174929246 5415 dbSNP
rs763776205 5415 dbSNP
rs1413559453 5420 dbSNP
rs1455046996 5421 dbSNP
rs1006463588 5422 dbSNP
rs951250147 5423 dbSNP
rs570554016 5427 dbSNP
rs188861885 5436 dbSNP
rs1438220330 5439 dbSNP
rs1353818173 5442 dbSNP
rs1439966988 5447 dbSNP
rs183919782 5461 dbSNP
rs1352411392 5472 dbSNP
rs949554323 5473 dbSNP
rs1229157775 5479 dbSNP
rs1387697953 5481 dbSNP
rs969107363 5484 dbSNP
rs1188829588 5507 dbSNP
rs774843336 5514 dbSNP
rs1423361684 5517 dbSNP
rs918098841 5529 dbSNP
rs1055579569 5540 dbSNP
rs1023279385 5541 dbSNP
rs1203050666 5542 dbSNP
rs1254678815 5556 dbSNP
rs1483089670 5587 dbSNP
rs1186666126 5595 dbSNP
rs1010515439 5599 dbSNP
rs1473594637 5615 dbSNP
rs1163575948 5625 dbSNP
rs1418549931 5636 dbSNP
rs1206923151 5638 dbSNP
rs1488746675 5643 dbSNP
rs1309766675 5645 dbSNP
rs1285493208 5648 dbSNP
rs957656833 5656 dbSNP
rs938143129 5659 dbSNP
rs1351212008 5661 dbSNP
rs1317132442 5665 dbSNP
rs1285092694 5666 dbSNP
rs1339143823 5673 dbSNP
rs143435906 5680 dbSNP
rs67670499 5680 dbSNP
rs751953079 5680 dbSNP
rs553511058 5682 dbSNP
rs1187856589 5683 dbSNP
rs1309976222 5704 dbSNP
rs979425597 5705 dbSNP
rs570166969 5707 dbSNP
rs551666241 5710 dbSNP
rs1254809660 5727 dbSNP
rs1418309106 5727 dbSNP
rs1367815011 5728 dbSNP
rs1443732981 5728 dbSNP
rs1164157904 5729 dbSNP
rs1241223252 5730 dbSNP
rs1457861325 5732 dbSNP
rs986686611 5758 dbSNP
rs763561108 5770 dbSNP
rs773709635 5772 dbSNP
rs1434059153 5776 dbSNP
rs1028194580 5778 dbSNP
rs996995871 5779 dbSNP
rs1173028434 5780 dbSNP
rs563322416 5780 dbSNP
rs941337953 5781 dbSNP
rs1200590197 5787 dbSNP
rs1346506903 5787 dbSNP
rs909803134 5787 dbSNP
rs962523404 5788 dbSNP
rs1190221829 5790 dbSNP
rs1248434429 5795 dbSNP
rs1016593336 5798 dbSNP
rs1453660796 5802 dbSNP
rs1191674096 5806 dbSNP
rs1047388857 5812 dbSNP
rs1003859545 5821 dbSNP
rs1173277184 5823 dbSNP
rs886788183 5829 dbSNP
rs1455866313 5836 dbSNP
rs146382796 5838 dbSNP
rs191286617 5839 dbSNP
rs1191745912 5845 dbSNP
rs896644885 5847 dbSNP
rs981891322 5848 dbSNP
rs1260024643 5857 dbSNP
rs1233296229 5862 dbSNP
rs1055326751 5871 dbSNP
rs1278473767 5877 dbSNP
rs1326581201 5888 dbSNP
rs1210224804 5901 dbSNP
rs969138525 5905 dbSNP
rs938075746 5918 dbSNP
rs1467864597 5920 dbSNP
rs536652088 5934 dbSNP
rs925346618 5939 dbSNP
rs1043801939 5944 dbSNP
rs569627180 5946 dbSNP
rs1269338373 5948 dbSNP
rs551224945 5951 dbSNP
rs1433733777 5954 dbSNP
rs142250917 5961 dbSNP
rs1471697013 5965 dbSNP
rs565763225 5967 dbSNP
rs1389740356 5969 dbSNP
rs1355566510 5971 dbSNP
rs1263607588 5977 dbSNP
rs913904992 5980 dbSNP
rs1292185013 5982 dbSNP
rs111955366 5985 dbSNP
rs1305598471 5993 dbSNP
rs1033273341 5995 dbSNP
rs781308998 5996 dbSNP
rs1288573596 6004 dbSNP
rs541970324 6008 dbSNP
rs1277224734 6012 dbSNP
rs1333755439 6013 dbSNP
rs1242288466 6025 dbSNP
rs567649295 6026 dbSNP
rs768896331 6027 dbSNP
rs975298508 6029 dbSNP
rs962882262 6035 dbSNP
rs1016666724 6037 dbSNP
rs1482110038 6045 dbSNP
rs1389289409 6058 dbSNP
rs1184494446 6069 dbSNP
rs1170131823 6071 dbSNP
rs1412930362 6079 dbSNP
rs982537555 6080 dbSNP
rs1423490815 6083 dbSNP
rs547630559 6084 dbSNP
rs1024016733 6096 dbSNP
rs1370575203 6101 dbSNP
rs182595517 6104 dbSNP
rs998328782 6105 dbSNP
rs1369308278 6117 dbSNP
rs1411096766 6119 dbSNP
rs1308144736 6130 dbSNP
rs1354379159 6132 dbSNP
rs138983528 6133 dbSNP
rs1393942764 6138 dbSNP
rs1314530278 6139 dbSNP
rs899938391 6140 dbSNP
rs1014240876 6157 dbSNP
rs1226502733 6159 dbSNP
rs1018332974 6162 dbSNP
rs1005559028 6175 dbSNP
rs150717109 6179 dbSNP
rs1047057073 6192 dbSNP
rs1034364683 6197 dbSNP
rs1483014141 6201 dbSNP
rs1002345918 6210 dbSNP
rs904036481 6211 dbSNP
rs1258611875 6219 dbSNP
rs1424746089 6220 dbSNP
rs929905632 6221 dbSNP
rs1388813777 6223 dbSNP
rs530968042 6231 dbSNP
rs1432196851 6232 dbSNP
rs906446633 6251 dbSNP
rs1374327507 6261 dbSNP
rs1445264638 6265 dbSNP
rs1043750333 6270 dbSNP
rs945501925 6271 dbSNP
rs892457504 6273 dbSNP
rs1051133382 6284 dbSNP
rs190383183 6285 dbSNP
rs1367206692 6288 dbSNP
rs933885583 6288 dbSNP
rs916331414 6294 dbSNP
rs921169877 6301 dbSNP
rs1275354108 6305 dbSNP
rs989599019 6305 dbSNP
rs1311674125 6313 dbSNP
rs746860430 6315 dbSNP
rs1442568873 6323 dbSNP
rs975750539 6330 dbSNP
rs34616802 6344 dbSNP
rs1318459732 6349 dbSNP
rs923640173 6351 dbSNP
rs941141238 6360 dbSNP
rs909721372 6367 dbSNP
rs1188272929 6369 dbSNP
rs1246590226 6385 dbSNP
rs977774255 6385 dbSNP
rs1425158870 6393 dbSNP
rs74821658 6394 dbSNP
rs1346687946 6396 dbSNP
rs1177661008 6408 dbSNP
rs951144279 6409 dbSNP
rs1275068729 6410 dbSNP
rs1318226976 6413 dbSNP
rs1390566198 6417 dbSNP
rs976923909 6427 dbSNP
rs1302568893 6430 dbSNP
rs11542698 6431 dbSNP
rs1365464299 6436 dbSNP
rs186717028 6438 dbSNP
rs1303529622 6442 dbSNP
rs1312934089 6442 dbSNP
rs1208352322 6443 dbSNP
rs1266547726 6443 dbSNP
rs1466518569 6447 dbSNP
rs1018446397 6463 dbSNP
rs750384791 6464 dbSNP
rs1477346751 6473 dbSNP
rs1192384054 6475 dbSNP
rs559552820 6480 dbSNP
rs1425280753 6483 dbSNP
rs1472024063 6485 dbSNP
rs1390460710 6486 dbSNP
rs183852685 6487 dbSNP
rs1322696878 6488 dbSNP
rs1331503516 6495 dbSNP
rs888521994 6502 dbSNP
rs374007656 6508 dbSNP
rs1295297385 6509 dbSNP
rs1033901256 6519 dbSNP
rs34765497 6525 dbSNP
rs1227924781 6532 dbSNP
rs1002870504 6538 dbSNP
rs1286654777 6539 dbSNP
rs374821664 6546 dbSNP
rs1229346035 6548 dbSNP
rs555686872 6555 dbSNP
rs994152949 6565 dbSNP
rs1450335288 6567 dbSNP
rs3802776 6572 dbSNP
rs1009591524 6593 dbSNP
rs892577073 6598 dbSNP
rs1051636494 6607 dbSNP
rs1046259715 6610 dbSNP
rs575985669 6619 dbSNP
rs947896341 6625 dbSNP
rs895015523 6628 dbSNP
rs191596655 6631 dbSNP
rs1411361183 6636 dbSNP
rs899840923 6644 dbSNP
rs1406941533 6645 dbSNP
rs756761781 6648 dbSNP
rs1477598571 6650 dbSNP
rs1409247072 6652 dbSNP
rs1306289506 6654 dbSNP
rs1352513234 6660 dbSNP
rs941298405 6668 dbSNP
rs909709948 6669 dbSNP
rs141163991 6670 dbSNP
rs1354685416 6683 dbSNP
rs1230446796 6684 dbSNP
rs1291191689 6685 dbSNP
rs763712520 6686 dbSNP
rs1202358954 6687 dbSNP
rs1483140415 6692 dbSNP
rs923686945 6692 dbSNP
rs1186395305 6703 dbSNP
rs565778359 6713 dbSNP
rs187225471 6723 dbSNP
rs1473642019 6733 dbSNP
rs1182271190 6738 dbSNP
rs529552730 6743 dbSNP
rs1443625654 6744 dbSNP
rs1427760075 6745 dbSNP
rs775609845 6747 dbSNP
rs1372498214 6756 dbSNP
rs992994639 6758 dbSNP
rs958358922 6760 dbSNP
rs1218243668 6769 dbSNP
rs926988838 6777 dbSNP
rs1450598073 6781 dbSNP
rs980979311 6786 dbSNP
rs968297714 6792 dbSNP
rs367705419 6797 dbSNP
rs1226842533 6804 dbSNP
rs1022404235 6818 dbSNP
rs1339456665 6821 dbSNP
rs1241248802 6822 dbSNP
rs1199434574 6827 dbSNP
rs535697697 6829 dbSNP
rs1009670030 6841 dbSNP
rs956884134 6844 dbSNP
rs1029714017 6846 dbSNP
rs148211982 6850 dbSNP
rs899829852 6853 dbSNP
rs752333360 6854 dbSNP
rs550134376 6856 dbSNP
rs766861412 6857 dbSNP
rs1190432062 6864 dbSNP
rs984291014 6871 dbSNP
rs181941035 6878 dbSNP
rs1333545081 6879 dbSNP
rs763360215 6881 dbSNP
rs1400287125 6882 dbSNP
rs520287 6884 dbSNP
rs11021062 6886 dbSNP
rs1337727705 6889 dbSNP
rs994578338 6891 dbSNP
rs1047026154 6896 dbSNP
rs145886543 6897 dbSNP
rs1327567707 6918 dbSNP
rs1012156104 6919 dbSNP
rs688272 6920 dbSNP
rs895046616 6921 dbSNP
rs1346608448 6928 dbSNP
rs1054042640 6936 dbSNP
rs1379677374 6940 dbSNP
rs917071917 6944 dbSNP
rs1449039565 6958 dbSNP
rs680237 6959 dbSNP
rs1463368752 6964 dbSNP
rs1176674412 6968 dbSNP
rs1056878910 6970 dbSNP
rs201332680 6973 dbSNP
rs1450998667 6974 dbSNP
rs937118544 6976 dbSNP
rs1198191704 6978 dbSNP
rs1237577786 6990 dbSNP
rs1177400056 6991 dbSNP
rs1322999319 6991 dbSNP
rs1386247874 6991 dbSNP
rs1479086189 6991 dbSNP
rs35582995 6991 dbSNP
rs397752773 6991 dbSNP
rs1208753679 6992 dbSNP
rs1320943425 6993 dbSNP
rs926963834 6999 dbSNP
rs978419894 7000 dbSNP
rs1287717206 7006 dbSNP
rs1326688786 7007 dbSNP
rs776515492 7028 dbSNP
rs915467487 7034 dbSNP
rs1261118098 7039 dbSNP
rs988362192 7041 dbSNP
rs1353412974 7043 dbSNP
rs1269445672 7048 dbSNP
rs1490854081 7052 dbSNP
rs1042107219 7054 dbSNP
rs562555445 7055 dbSNP
rs933049721 7056 dbSNP
rs533133548 7061 dbSNP
rs1161750462 7064 dbSNP
rs1380466431 7067 dbSNP
rs1283689059 7068 dbSNP
rs1161967785 7071 dbSNP
rs1030284068 7072 dbSNP
rs1405000211 7084 dbSNP
rs1306907103 7086 dbSNP
rs1348190495 7091 dbSNP
rs542814859 7127 dbSNP
rs1342687539 7129 dbSNP
rs770303513 7130 dbSNP
rs1420128197 7151 dbSNP
rs761844192 7152 dbSNP
rs1223249015 7153 dbSNP
rs1274028140 7159 dbSNP
rs1482156333 7161 dbSNP
rs1179161628 7164 dbSNP
rs1156567586 7166 dbSNP
rs75437674 7167 dbSNP
rs1407032353 7173 dbSNP
rs1018389831 7176 dbSNP
rs1414360015 7177 dbSNP
rs1038703211 7189 dbSNP
rs1180847067 7193 dbSNP
rs1425873606 7216 dbSNP
rs1167353665 7220 dbSNP
rs942962931 7229 dbSNP
rs776754518 7232 dbSNP
rs1471518310 7239 dbSNP
rs1264948749 7241 dbSNP
rs1005527288 7248 dbSNP
rs888455970 7255 dbSNP
rs867261354 7264 dbSNP
rs1378039181 7265 dbSNP
rs1394025032 7273 dbSNP
rs984712974 7285 dbSNP
rs1383359341 7291 dbSNP
rs1487736048 7300 dbSNP
rs1227574934 7312 dbSNP
rs1272469645 7313 dbSNP
rs188051343 7314 dbSNP
rs1206781263 7324 dbSNP
rs1252079507 7335 dbSNP
rs1483067383 7340 dbSNP
rs1224166600 7344 dbSNP
rs918674606 7368 dbSNP
rs541124326 7369 dbSNP
rs61893695 7377 dbSNP
rs1188483793 7380 dbSNP
rs1289786794 7390 dbSNP
rs1226737104 7395 dbSNP
rs895640648 7396 dbSNP
rs561928326 7398 dbSNP
rs1358166153 7404 dbSNP
rs1464240743 7412 dbSNP
rs1279122075 7423 dbSNP
rs112885822 7425 dbSNP
rs1406532449 7442 dbSNP
rs1295289336 7446 dbSNP
rs1434164409 7446 dbSNP
rs1216366616 7452 dbSNP
rs200957211 7452 dbSNP
rs959301959 7452 dbSNP
rs1032223544 7454 dbSNP
rs1338641254 7462 dbSNP
rs1286910338 7463 dbSNP
rs1231342783 7465 dbSNP
rs1265306020 7473 dbSNP
rs1462028584 7479 dbSNP
rs1001117481 7488 dbSNP
rs1246682737 7494 dbSNP
rs1487149275 7497 dbSNP
rs1186530720 7500 dbSNP
rs576693330 7501 dbSNP
rs1423857406 7508 dbSNP
rs1431014463 7515 dbSNP
rs1178122119 7518 dbSNP
rs1429620125 7534 dbSNP
rs1438346871 7541 dbSNP
rs1318333160 7542 dbSNP
rs937086171 7548 dbSNP
rs1289456333 7557 dbSNP
rs558128586 7560 dbSNP
rs1217603178 7564 dbSNP
rs1285395687 7567 dbSNP
rs1042612160 7572 dbSNP
rs1228115351 7575 dbSNP
rs1266640261 7577 dbSNP
rs1319180389 7584 dbSNP
rs1042803308 7585 dbSNP
rs545789691 7589 dbSNP
rs1246693890 7591 dbSNP
rs1425191252 7596 dbSNP
rs1170717738 7597 dbSNP
rs1477298811 7599 dbSNP
rs1269106935 7605 dbSNP
rs1260508112 7624 dbSNP
rs1409895890 7630 dbSNP
rs901580619 7630 dbSNP
rs1401143217 7634 dbSNP
rs912903343 7646 dbSNP
rs1038730929 7659 dbSNP
rs1246685887 7660 dbSNP
rs988350322 7661 dbSNP
rs571946262 7667 dbSNP
rs1305056510 7670 dbSNP
rs1219965896 7674 dbSNP
rs1409441204 7682 dbSNP
rs553952658 7684 dbSNP
rs922782157 7695 dbSNP
rs34432672 7696 dbSNP
rs1258819270 7699 dbSNP
rs1375963906 7719 dbSNP
rs1224732007 7725 dbSNP
rs1218025111 7735 dbSNP
rs1316297567 7739 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000536441.1 | 3UTR | AAUUAUAACACAAUCCUAUCACUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
82 hsa-miR-6509-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055374 PDCD4 programmed cell death 4 2 4
MIRT378341 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT444668 CDKL2 cyclin dependent kinase like 2 2 2
MIRT446953 CD248 CD248 molecule 2 2
MIRT460332 CAMK4 calcium/calmodulin dependent protein kinase IV 2 6
MIRT464078 VPS4A vacuolar protein sorting 4 homolog A 2 2
MIRT464586 UBN2 ubinuclein 2 2 2
MIRT468482 SESN3 sestrin 3 2 2
MIRT468962 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT475455 HSPA8 heat shock protein family A (Hsp70) member 8 2 2
MIRT482403 ADRB1 adrenoceptor beta 1 2 10
MIRT486992 ZFAND2B zinc finger AN1-type containing 2B 2 2
MIRT489397 TUBB2A tubulin beta 2A class IIa 2 2
MIRT526319 UGT2A1 UDP glucuronosyltransferase family 2 member A1 complex locus 2 2
MIRT526560 UGT2A2 UDP glucuronosyltransferase family 2 member A2 2 2
MIRT526732 ZNF138 zinc finger protein 138 2 8
MIRT531581 STXBP5L syntaxin binding protein 5 like 2 2
MIRT532011 NOX5 NADPH oxidase 5 2 2
MIRT533407 TXLNG taxilin gamma 2 2
MIRT533436 TRPC5 transient receptor potential cation channel subfamily C member 5 2 2
MIRT533866 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT539254 ANKRD50 ankyrin repeat domain 50 2 2
MIRT541451 C15orf48 chromosome 15 open reading frame 48 2 2
MIRT566794 MIER3 MIER family member 3 2 2
MIRT569294 SURF6 surfeit 6 2 2
MIRT571336 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT572802 PPP3CB protein phosphatase 3 catalytic subunit beta 2 2
MIRT572813 MYO1C myosin IC 2 2
MIRT574219 DMRT2 doublesex and mab-3 related transcription factor 2 2 2
MIRT607259 GRAMD1B GRAM domain containing 1B 2 4
MIRT609307 CHD4 chromodomain helicase DNA binding protein 4 2 2
MIRT615459 REPS1 RALBP1 associated Eps domain containing 1 2 2
MIRT616861 RPLP1 ribosomal protein lateral stalk subunit P1 2 2
MIRT619415 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT619652 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT625325 TNFRSF13B TNF receptor superfamily member 13B 2 2
MIRT638980 ARFIP2 ADP ribosylation factor interacting protein 2 2 2
MIRT639458 ZNF429 zinc finger protein 429 2 2
MIRT640550 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT641473 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT642720 ATXN3 ataxin 3 2 2
MIRT643048 SMN1 survival of motor neuron 1, telomeric 2 2
MIRT644921 SMN2 survival of motor neuron 2, centromeric 2 2
MIRT645875 ZNF275 zinc finger protein 275 2 2
MIRT649824 LIPG lipase G, endothelial type 2 2
MIRT649851 GYS2 glycogen synthase 2 2 2
MIRT649972 TRAFD1 TRAF-type zinc finger domain containing 1 2 2
MIRT650675 ZNF259 ZPR1 zinc finger 1 1
MIRT651319 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT652876 TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 2 2
MIRT652881 SYVN1 synoviolin 1 2 2
MIRT654144 RPAP2 RNA polymerase II associated protein 2 2 2
MIRT657080 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT657181 INO80C INO80 complex subunit C 2 2
MIRT657830 GJD3 gap junction protein delta 3 2 2
MIRT657897 GDF7 growth differentiation factor 7 2 2
MIRT659631 CDKN2AIP CDKN2A interacting protein 2 2
MIRT663115 SPTA1 spectrin alpha, erythrocytic 1 2 2
MIRT664739 METTL16 methyltransferase like 16 2 2
MIRT667551 LRAT lecithin retinol acyltransferase 2 2
MIRT668552 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT682893 XIAP X-linked inhibitor of apoptosis 2 2
MIRT683092 PRRG4 proline rich and Gla domain 4 2 2
MIRT683102 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT697648 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT709158 ZNF419 zinc finger protein 419 2 2
MIRT713220 RCAN2 regulator of calcineurin 2 2 2
MIRT713277 LAIR1 leukocyte associated immunoglobulin like receptor 1 2 2
MIRT715008 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT715051 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT715696 PNMAL2 paraneoplastic Ma antigen family member 8B 2 2
MIRT717250 TMEM246 transmembrane protein 246 2 2
MIRT717322 PGK1 phosphoglycerate kinase 1 2 2
MIRT717587 MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like 2 2
MIRT718122 CHST4 carbohydrate sulfotransferase 4 2 2
MIRT718418 CALN1 calneuron 1 2 2
MIRT718750 ZNF490 zinc finger protein 490 2 2
MIRT720048 PPP1R3F protein phosphatase 1 regulatory subunit 3F 2 2
MIRT721497 THRB thyroid hormone receptor beta 2 2
MIRT722531 EPRS glutamyl-prolyl-tRNA synthetase 2 2
MIRT723279 KRTAP21-2 keratin associated protein 21-2 2 2
MIRT724813 MSX2 msh homeobox 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6509-3p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-6509-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6509-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-6509-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-6509-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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