pre-miRNA Information
pre-miRNA hsa-mir-605   
Genomic Coordinates chr10: 51299573 - 51299655
Synonyms MIRN605, hsa-mir-605, MIR605
Description Homo sapiens miR-605 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-605-3p
Sequence 51| AGAAGGCACUAUGAGAUUUAGA |72
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 10 + 51299626 27587585, 28550310, 26028588, 26449202, 26487287, 29165639 MiREDiBase
A-to-I 14 10 + 51299636 29233923 MiREDiBase
A-to-I 20 10 + 51299642 18684997, 26449202, 27587585, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs759219082 5 dbSNP
rs1491224174 9 dbSNP
rs746611214 10 dbSNP
rs367648737 11 dbSNP
rs1359467239 14 dbSNP
rs1442565019 16 dbSNP
Putative Targets

Gene Information
Gene Symbol PMP22   
Synonyms CIDP, CMT1A, CMT1E, DSS, GAS-3, GAS3, HMSNIA, HNPP, Sp110
Description peripheral myelin protein 22
Transcript NM_000304   
Other Transcripts NM_153321 , NM_153322   
Expression
Putative miRNA Targets on PMP22
3'UTR of PMP22
(miRNA target sites are highlighted)
>PMP22|NM_000304|3'UTR
   1 GGCGCCCAGACGGTCTGTCTGAGGCTCTGAGCGTACATAGGGAAGGGAGGAAGGGAAAACAGAAAGCAGACAAAGAAAAA
  81 AGAGCTAGCCCAAAATCCCAAACTCAAACCAAACCAAACAGAAAGCAGTGGAGGTGGGGGTTGCTGTTGATTGAAGATGT
 161 ATATAATATCTCCGGTTTATAAAACCTATTTATAACACTTTTTACATATATGTACATAGTATTGTTTGCTTTTTATGTTG
 241 ACCATCAGCCTCGTGTTGAGCCTTAAAGAAGTAGCTAAGGAACTTTACATCCTAACAGTATAATCCAGCTCAGTATTTTT
 321 GTTTTGTTTTTTGTTTGTTTGTTTTGTTTTACCCAGAAATAAGATAACTCCATCTCGCCCCTTCCCTTTCATCTGAAAGA
 401 AGATACCTCCCTCCCAGTCCACCTCATTTAGAAAACCAAAGTGTGGGTAGAAACCCCAAATGTCCAAAAGCCCTTTTCTG
 481 GTGGGTGACCCAGTGCATCCAACAGAAACAGCCGCTGCCCGAACCTCTGTGTGAAGCTTTACGCGCACACGGACAAAATG
 561 CCCAAACTGGAGCCCTTGCAAAAACACGGCTTGTGGCATTGGCATACTTGCCCTTACAGGTGGAGTATCTTCGTCACACA
 641 TCTAAATGAGAAATCAGTGACAACAAGTCTTTGAAATGGTGCTATGGATTTACCATTCCTTATTATCACTAATCATCTAA
 721 ACAACTCACTGGAAATCCAATTAACAATTTTACAACATAAGATAGAATGGAGACCTGAATAATTCTGTGTAATATAAATG
 801 GTTTATAACTGCTTTTGTACCTAGCTAGGCTGCTATTATTACTATAATGAGTAAATCATAAAGCCTTCATCACTCCCACA
 881 TTTTTCTTACGGTCGGAGCATCAGAACAAGCGTCTAGACTCCTTGGGACCGTGAGTTCCTAGAGCTTGGCTGGGTCTAGG
 961 CTGTTCTGTGCCTCCAAGGACTGTCTGGCAATGACTTGTATTGGCCACCAACTGTAGATGTATATATGGTGCCCTTCTGA
1041 TGCTAAGACTCCAGACCTTTTGTTTTTGCTTTGCATTTTCTGATTTTATACCAACTGTGTGGACTAAGATGCATTAAAAT
1121 AAACATCAGAGTAACTCACT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agAUUUAGAGUAUCACGGAAGa 5'
            ||||  |||||  |||||| 
Target 5' agTAAA--TCATAAAGCCTTCa 3'
850 - 869 140.00 -11.40
2
miRNA  3' agAUUUAGA---GUAUCAC-GGAAGa 5'
            ||:|| |   :||:||| ||||| 
Target 5' tgTAGATGTATATATGGTGCCCTTCt 3'
1013 - 1038 136.00 -15.00
3
miRNA  3' agAUUUA--GAGUA-UCACGGAAGa 5'
            |||||  :|:|| | |||:||: 
Target 5' taTAAATGGTTTATAACTGCTTTTg 3'
793 - 817 134.00 -5.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
321861 3 ClinVar
1194039 4 ClinVar
1195643 8 ClinVar
321860 26 ClinVar
321859 59 ClinVar
890583 63 ClinVar
694890 84 ClinVar
321858 120 ClinVar
321857 173 ClinVar
890582 174 ClinVar
888884 200 ClinVar
321856 205 ClinVar
321855 228 ClinVar
321854 243 ClinVar
892285 376 ClinVar
321853 529 ClinVar
321852 542 ClinVar
891069 544 ClinVar
321851 577 ClinVar
891068 596 ClinVar
890504 818 ClinVar
321850 828 ClinVar
890503 890 ClinVar
888800 894 ClinVar
888799 907 ClinVar
888798 911 ClinVar
321849 912 ClinVar
892221 961 ClinVar
321848 985 ClinVar
321847 1049 ClinVar
321846 1111 ClinVar
321845 1120 ClinVar
COSN19033127 3 COSMIC
COSN30119201 4 COSMIC
COSN30494414 6 COSMIC
COSN31966724 7 COSMIC
COSN31589355 9 COSMIC
COSN31610108 11 COSMIC
COSN30105299 16 COSMIC
COSN13701484 24 COSMIC
COSN30106589 24 COSMIC
COSN28850187 25 COSMIC
COSN26989618 32 COSMIC
COSN31564429 33 COSMIC
COSN30524927 53 COSMIC
COSN7812711 59 COSMIC
COSN30507640 62 COSMIC
COSN31512191 75 COSMIC
COSN31591884 75 COSMIC
COSN31529670 77 COSMIC
COSN8832097 84 COSMIC
COSN31961282 88 COSMIC
COSN30459525 98 COSMIC
COSN31599931 121 COSMIC
COSN31547701 182 COSMIC
COSN21467249 246 COSMIC
COSN31595657 381 COSMIC
COSN26576697 390 COSMIC
COSN9656095 410 COSMIC
COSN31519205 431 COSMIC
COSN31595009 474 COSMIC
COSN15212612 503 COSMIC
COSN30544815 521 COSMIC
COSN20113581 525 COSMIC
COSN31582709 543 COSMIC
COSN28673243 577 COSMIC
COSN22266299 581 COSMIC
COSN31482702 588 COSMIC
COSN31484467 655 COSMIC
COSN31522472 691 COSMIC
COSN6099581 748 COSMIC
COSN31602577 808 COSMIC
COSN23879811 902 COSMIC
COSN17015638 911 COSMIC
COSN30173094 938 COSMIC
COSN28651611 1111 COSMIC
COSN31489911 1127 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1221643686 1 dbSNP
rs1487418732 2 dbSNP
rs1348580629 3 dbSNP
rs373690370 3 dbSNP
rs570955542 4 dbSNP
rs1308336637 6 dbSNP
rs199650994 8 dbSNP
rs758935587 8 dbSNP
rs772282020 11 dbSNP
rs758748518 12 dbSNP
rs1347436597 24 dbSNP
rs200563670 26 dbSNP
rs906229537 31 dbSNP
rs763703270 32 dbSNP
rs201128796 33 dbSNP
rs752369935 37 dbSNP
rs549180136 38 dbSNP
rs1353607905 39 dbSNP
rs1279225806 51 dbSNP
rs13422 59 dbSNP
rs1470706041 62 dbSNP
rs1429369556 66 dbSNP
rs1197999731 67 dbSNP
rs1431376156 68 dbSNP
rs1252531620 69 dbSNP
rs1177595428 71 dbSNP
rs1480175288 72 dbSNP
rs11545342 75 dbSNP
rs1196980214 76 dbSNP
rs1325857230 77 dbSNP
rs773958994 79 dbSNP
rs1263836474 81 dbSNP
rs1461350785 82 dbSNP
rs1222938795 84 dbSNP
rs1329878752 87 dbSNP
rs1309756495 88 dbSNP
rs774341981 90 dbSNP
rs560368157 92 dbSNP
rs1038276725 96 dbSNP
rs541586082 98 dbSNP
rs1454262115 100 dbSNP
rs773184749 102 dbSNP
rs769746708 110 dbSNP
rs1464065264 116 dbSNP
rs1365514823 119 dbSNP
rs112829799 120 dbSNP
rs1418354034 129 dbSNP
rs781273381 132 dbSNP
rs768773339 136 dbSNP
rs1336514763 137 dbSNP
rs1462848374 139 dbSNP
rs747112334 140 dbSNP
rs780587002 144 dbSNP
rs919218318 149 dbSNP
rs572563714 151 dbSNP
rs750957962 157 dbSNP
rs1353548103 158 dbSNP
rs1282715853 161 dbSNP
rs1355785468 163 dbSNP
rs1307544600 166 dbSNP
rs1248574452 167 dbSNP
rs1383105484 169 dbSNP
rs779198796 171 dbSNP
rs117277951 173 dbSNP
rs1386490077 174 dbSNP
rs752328330 176 dbSNP
rs987768280 177 dbSNP
rs1378361736 194 dbSNP
rs767142484 198 dbSNP
rs142106420 200 dbSNP
rs189734097 205 dbSNP
rs766390986 206 dbSNP
rs1440822726 208 dbSNP
rs762946632 209 dbSNP
rs968781773 215 dbSNP
rs1205725631 217 dbSNP
rs1021673443 220 dbSNP
rs1804193 228 dbSNP
rs956539667 231 dbSNP
rs1464528331 233 dbSNP
rs540148653 235 dbSNP
rs533987307 243 dbSNP
rs1393334119 245 dbSNP
rs977610998 250 dbSNP
rs906448084 251 dbSNP
rs1023311535 252 dbSNP
rs1198045389 253 dbSNP
rs1011877584 261 dbSNP
rs898926805 288 dbSNP
rs1037425956 290 dbSNP
rs866479183 313 dbSNP
rs1415547041 317 dbSNP
rs1295208993 320 dbSNP
rs765955811 321 dbSNP
rs1226634116 327 dbSNP
rs1252604094 328 dbSNP
rs1023923800 331 dbSNP
rs1013909893 333 dbSNP
rs1277558429 336 dbSNP
rs1485795265 340 dbSNP
rs894203343 345 dbSNP
rs1260432856 355 dbSNP
rs373020223 356 dbSNP
rs1477103213 364 dbSNP
rs1193150715 368 dbSNP
rs1034079273 374 dbSNP
rs575964802 376 dbSNP
rs886633729 378 dbSNP
rs1375007254 380 dbSNP
rs1435586951 382 dbSNP
rs1314776009 383 dbSNP
rs1051876240 393 dbSNP
rs1274839852 404 dbSNP
rs1046933604 407 dbSNP
rs929873909 408 dbSNP
rs1327975357 409 dbSNP
rs533679946 419 dbSNP
rs1230701221 436 dbSNP
rs1302426391 439 dbSNP
rs1255753243 441 dbSNP
rs746771913 446 dbSNP
rs922154030 448 dbSNP
rs901122284 464 dbSNP
rs1348087801 467 dbSNP
rs1212611846 470 dbSNP
rs1283230281 470 dbSNP
rs1039014494 473 dbSNP
rs1040382788 481 dbSNP
rs947367708 484 dbSNP
rs914656794 486 dbSNP
rs988941721 498 dbSNP
rs1205048996 503 dbSNP
rs1367981574 508 dbSNP
rs1263132729 509 dbSNP
rs944745100 513 dbSNP
rs1197131953 514 dbSNP
rs1394880011 520 dbSNP
rs1454843933 521 dbSNP
rs956302874 524 dbSNP
rs1358687664 525 dbSNP
rs16418 527 dbSNP
rs1289526624 529 dbSNP
rs71699667 529 dbSNP
rs923839157 537 dbSNP
rs1386973398 541 dbSNP
rs184928176 542 dbSNP
rs1399724611 543 dbSNP
rs1329536994 544 dbSNP
rs1471101868 545 dbSNP
rs551380652 546 dbSNP
rs1306708181 547 dbSNP
rs970633285 549 dbSNP
rs775055426 550 dbSNP
rs1011931376 551 dbSNP
rs926085666 563 dbSNP
rs1469235741 572 dbSNP
rs963104481 574 dbSNP
rs7538 577 dbSNP
rs1378627897 578 dbSNP
rs568822260 587 dbSNP
rs1004674553 588 dbSNP
rs1235876418 590 dbSNP
rs1365632498 593 dbSNP
rs1205135654 596 dbSNP
rs992885325 597 dbSNP
rs1276148309 609 dbSNP
rs1442920222 614 dbSNP
rs1329054842 619 dbSNP
rs1372089381 620 dbSNP
rs1391639078 622 dbSNP
rs958370094 632 dbSNP
rs1442594434 633 dbSNP
rs557609991 635 dbSNP
rs886180009 650 dbSNP
rs1051888342 651 dbSNP
rs997601453 664 dbSNP
rs371508374 667 dbSNP
rs796117455 667 dbSNP
rs1200172742 669 dbSNP
rs1215880582 673 dbSNP
rs181257692 699 dbSNP
rs1034438296 704 dbSNP
rs900782186 714 dbSNP
rs1178034599 728 dbSNP
rs1039234144 742 dbSNP
rs1005262176 755 dbSNP
rs947615363 757 dbSNP
rs747872532 764 dbSNP
rs1418409500 772 dbSNP
rs375638809 783 dbSNP
rs1462963014 792 dbSNP
rs1168211482 794 dbSNP
rs952478524 803 dbSNP
rs1462151910 808 dbSNP
rs1241568983 810 dbSNP
rs914604240 817 dbSNP
rs529200588 818 dbSNP
rs1803629 821 dbSNP
rs13027 828 dbSNP
rs1376336053 835 dbSNP
rs1413558953 838 dbSNP
rs1293387822 840 dbSNP
rs550359128 842 dbSNP
rs1359902036 849 dbSNP
rs994028673 852 dbSNP
rs1271281563 862 dbSNP
rs1307331243 864 dbSNP
rs754583973 868 dbSNP
rs901069871 869 dbSNP
rs1333756316 871 dbSNP
rs1484819012 873 dbSNP
rs1804192 885 dbSNP
rs1187244951 887 dbSNP
rs981958578 889 dbSNP
rs546778557 890 dbSNP
rs1476124065 891 dbSNP
rs916402753 894 dbSNP
rs568790725 895 dbSNP
rs1439048654 898 dbSNP
rs963622100 907 dbSNP
rs1015965333 911 dbSNP
rs149070440 912 dbSNP
rs889090722 919 dbSNP
rs1050861677 921 dbSNP
rs950499674 926 dbSNP
rs936098741 927 dbSNP
rs201970368 930 dbSNP
rs552027045 931 dbSNP
rs926074195 935 dbSNP
rs1210476708 946 dbSNP
rs1281092386 953 dbSNP
rs1207659283 954 dbSNP
rs1030014576 955 dbSNP
rs1441029491 960 dbSNP
rs760879114 961 dbSNP
rs1213551466 964 dbSNP
rs1241378819 972 dbSNP
rs886052610 985 dbSNP
rs545400789 988 dbSNP
rs1217849656 992 dbSNP
rs756594808 994 dbSNP
rs1393067460 1004 dbSNP
rs1453386380 1023 dbSNP
rs946242667 1026 dbSNP
rs189748556 1027 dbSNP
rs562876551 1033 dbSNP
rs1396346128 1037 dbSNP
rs917428643 1040 dbSNP
rs1017711738 1045 dbSNP
rs750733887 1049 dbSNP
rs1290960008 1055 dbSNP
rs1380064254 1061 dbSNP
rs1233816232 1073 dbSNP
rs1304520294 1074 dbSNP
rs1283802872 1076 dbSNP
rs1446150243 1081 dbSNP
rs1222085494 1086 dbSNP
rs1283679734 1088 dbSNP
rs893374054 1088 dbSNP
rs1217911038 1102 dbSNP
rs7415 1111 dbSNP
rs11654383 1120 dbSNP
rs1193870482 1134 dbSNP
rs1254422321 1139 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000395938.2 | 3UTR | CCUUCAUCACUCCCACAUUUUUCUUACGGUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
100 hsa-miR-605-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061339 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT061584 BTG2 BTG anti-proliferation factor 2 2 6
MIRT076140 WDR81 WD repeat domain 81 2 2
MIRT079361 CCDC137 coiled-coil domain containing 137 2 2
MIRT079547 VAMP3 vesicle associated membrane protein 3 2 2
MIRT096242 CANX calnexin 2 2
MIRT243877 G3BP1 G3BP stress granule assembly factor 1 2 4
MIRT249186 AKIRIN1 akirin 1 2 8
MIRT273604 SP1 Sp1 transcription factor 2 2
MIRT316766 FOXC1 forkhead box C1 2 4
MIRT322410 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT370117 TRIB3 tribbles pseudokinase 3 2 2
MIRT392725 UBN2 ubinuclein 2 2 2
MIRT406910 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT407440 CTDSP1 CTD small phosphatase 1 2 2
MIRT441887 RD3 retinal degeneration 3 2 4
MIRT444979 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT445241 FOXD4 forkhead box D4 2 2
MIRT445500 FOXD4L5 forkhead box D4 like 5 2 2
MIRT445503 FOXD4L4 forkhead box D4 like 4 2 2
MIRT447025 FOXD4L1 forkhead box D4 like 1 2 2
MIRT447743 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT448761 HDX highly divergent homeobox 2 2
MIRT450003 HAX1 HCLS1 associated protein X-1 2 2
MIRT452830 FAM131B family with sequence similarity 131 member B 2 2
MIRT452872 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT453506 ARRB1 arrestin beta 1 2 2
MIRT454169 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT458742 CES2 carboxylesterase 2 2 2
MIRT459166 HSPA6 heat shock protein family A (Hsp70) member 6 2 21
MIRT460246 IL17RB interleukin 17 receptor B 2 4
MIRT460514 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT460698 RNF157 ring finger protein 157 2 2
MIRT461481 METTL1 methyltransferase like 1 2 2
MIRT462617 C20orf27 chromosome 20 open reading frame 27 2 4
MIRT463233 ZNF131 zinc finger protein 131 2 2
MIRT465699 TNPO2 transportin 2 2 8
MIRT466304 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT468957 RPS14 ribosomal protein S14 2 6
MIRT469571 RARA retinoic acid receptor alpha 2 2
MIRT469685 RAB5B RAB5B, member RAS oncogene family 2 2
MIRT470800 PMP22 peripheral myelin protein 22 2 2
MIRT471649 PANK2 pantothenate kinase 2 2 4
MIRT471722 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT472281 NFIB nuclear factor I B 2 4
MIRT473680 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT475859 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT477326 EPHA2 EPH receptor A2 2 2
MIRT477831 DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 2 2
MIRT478572 CTNND1 catenin delta 1 2 4
MIRT479634 CD81 CD81 molecule 2 2
MIRT481950 ANKRD11 ankyrin repeat domain 11 2 2
MIRT483696 ZNF74 zinc finger protein 74 2 6
MIRT488798 MALT1 MALT1 paracaspase 2 2
MIRT489066 STARD3 StAR related lipid transfer domain containing 3 2 2
MIRT492533 PSMD11 proteasome 26S subunit, non-ATPase 11 2 2
MIRT492857 NRARP NOTCH regulated ankyrin repeat protein 2 2
MIRT496793 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT500122 ZNF106 zinc finger protein 106 2 4
MIRT505359 TMEM167A transmembrane protein 167A 2 2
MIRT506786 KLHL15 kelch like family member 15 2 6
MIRT510692 SRM spermidine synthase 2 6
MIRT515841 CEP104 centrosomal protein 104 2 4
MIRT516448 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT528855 PKP1 plakophilin 1 2 2
MIRT533848 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT539025 ATXN7L1 ataxin 7 like 1 2 4
MIRT542872 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT546543 SATB2 SATB homeobox 2 2 2
MIRT554114 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT560569 ZNF460 zinc finger protein 460 2 2
MIRT560796 EPM2AIP1 EPM2A interacting protein 1 2 2
MIRT562836 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT563109 IFRD2 interferon related developmental regulator 2 2 2
MIRT564177 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT564283 ASB1 ankyrin repeat and SOCS box containing 1 2 2
MIRT564350 USP22 ubiquitin specific peptidase 22 2 2
MIRT565279 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT565338 TMEM104 transmembrane protein 104 2 2
MIRT565905 SCAMP2 secretory carrier membrane protein 2 2 2
MIRT567108 ITGB1 integrin subunit beta 1 2 2
MIRT567601 FANCF Fanconi anemia complementation group F 2 2
MIRT567779 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT568075 CENPQ centromere protein Q 2 2
MIRT624304 COL12A1 collagen type XII alpha 1 chain 2 2
MIRT644395 CDKL1 cyclin dependent kinase like 1 2 2
MIRT661547 ZNF674 zinc finger protein 674 2 4
MIRT670949 IRAK3 interleukin 1 receptor associated kinase 3 2 2
MIRT672951 AKAP5 A-kinase anchoring protein 5 2 2
MIRT697426 ZFP36 ZFP36 ring finger protein 2 2
MIRT700793 PIAS2 protein inhibitor of activated STAT 2 2 2
MIRT702657 ITGA3 integrin subunit alpha 3 2 2
MIRT708945 FZR1 fizzy and cell division cycle 20 related 1 2 2
MIRT713657 PLCE1 phospholipase C epsilon 1 2 2
MIRT719239 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719951 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT722048 HLA-E major histocompatibility complex, class I, E 2 2
MIRT722201 URM1 ubiquitin related modifier 1 2 2
MIRT724790 C1D C1D nuclear receptor corepressor 2 2
MIRT734347 CYP2B6 cytochrome P450 family 2 subfamily B member 6 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-605 Anthranilamide-pyrazolo[1,5-a]pyrimidine NULL NULL Quantitative real-time PCR neuroblastoma cells 23992861 2013 up-regualted
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-605 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-605 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-605 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-605 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-605-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)

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