pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MORN4   
Synonyms C10orf83, bA548K23.4, rtp
Description MORN repeat containing 4
Transcript NM_001098831   
Other Transcripts NM_178832   
Expression
Putative miRNA Targets on MORN4
3'UTR of MORN4
(miRNA target sites are highlighted)
>MORN4|NM_001098831|3'UTR
   1 CAGCGCAGTGGGCACCAGCTGATAAGTATTGGGTAAAGCCAGTGCCCCTGTTGTTGATTCGAGGTGAACAAATGAATCAG
  81 AGCTGAGATGAGTTGACAATGACAGTGGAGCAGAGGCCTTGTATGTGCCCTGTCACCTGCCATTCCAGAACTGGACCACA
 161 GAAAAGTGCTGAGGATGCTGGCCAGCAGACCCTGCAGCAGTCATTGGTGGTTCTGTCTTTCCCTAACCCTTATGTGCTGG
 241 AGGACAGAGGAGCCACCTCTTCTCACTGGTTGATACTCTGTTCCTAAGACCTCAGGTTACCCAGTGTAGCCTGCTGTGAC
 321 CCTTCTGCTTCATTTTCTGCCAAGTGATACAGAACCTTCGTTCTGCTGCTTTGGGGACAGGTGATCCTAGCCCCAGCTTA
 401 GGGCCAGTGCTCTGTGCCACTCTGGAGAAATAGGGAAAAGATAGGGGTGGCTCAGTACAGCAGCCCTGTGAAAGTCAAGG
 481 CCAGAGCTTTTCTTTTTTAATTTTTTTATTATTATTATTATTATTTTATTTTTTATTTTTGAGATGGAGTTTTACTCTCG
 561 CCCAGGCTAGAGTGCAGTGGCATGATCTCAGCTCACTGCAACTTCTGCCTCCCAGGTTCAAGCAATTCCCCTGCCTCAGC
 641 TTCCTGAGTAGCTGGGACTACAGGAGCGCGCCACCACACCCAGCTAATTTTTGTATTTTTTTTTAGTAGAGACGGGGTTT
 721 CACCATATTGGCCAGGCTGGTCTCAAACTCCTGACCTCGTGATCCACCCGCCTTGGTCTCCCAAAGTGCTGGGATTACAG
 801 GCGTGAGCCACCACGCTCAGCCTTTAATTTTATTATTATAAAAAATTGAGCCAGGGTCTTGCTATGTGGCTCAGGCTCAT
 881 CTCAAAATCCTGGGCTCAAGTGATCCTCCTGCCTGGGCCTGCCAAAGTGCTAGGATTGCAGGTGTGAGCCACTGTGCCTG
 961 GCTGGCAGAGCTTTTCCATATGTTACTCCTCATGCTGGTTGGAATCATGGCTGCAGGCTTCCACTTGGTCTGATCAGACT
1041 GGTATTCATTCCTGCCTATGTCCCCGTGAAGGATTCGGTAAGAGTGCTATTTCCTCCTCCCTTTAGAAGACAGGCTGTCT
1121 TCTTTCATCAACTTAGAGCAGATAATCCCCATGTGTGCCTCTCTCCTTCCTTAGATGGGGAACAGGATCCCTTTTTGGGA
1201 CAATCAAGAAAAAAACTCATGTAAACAGTAATCTTATTACTTGTATTTGTGACTAACTCCAGGGAAAAGGGTAGAATATT
1281 TAGGCCACTTCAGGCACTACCATGGAGTGAACTGAATTCATACGGATGGCTTGGGCTGACACAGTTTCTTCCCAGTGGAC
1361 CAATAAATCAGACTCACCCGAACCCCTGGGGTTTTGGTAGAATTGGACCTACTCTAGGACTGTGGGGAACTAAAGGAGCA
1441 TTTGGCTCACTGTAGCTCTTCTATCATGAGCCTTGACCGTCAGGCCGCAATCAGACCTTACTGATGGGATCTCTGCAGTT
1521 TATTACGTAGGCCTCCCGTTACCCTGGTACCCAAATACGTCCCCCACCTCTAGCTCCCTAGCCTCACATTGAATGTCTCT
1601 TCAACAGCAGATTGTGGTGGAAGTTATAGCCGTGTGCCTCTATTTATTCTCTGAATTGTACTGTAGAAAAAGGTGTTTAT
1681 AAAGAATAAAGAAATCACCAGAACTGCCTAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaGGUGAC---GAUGUUGGAGGGUCu 5'
            :|||||   || | :|||||||| 
Target 5' gcTCACTGCAACTTCTGCCTCCCAGg 3'
591 - 616 169.00 -28.60
2
miRNA  3' aaggUGACGAUGUU---GGAGGGUCu 5'
              :|||  |||:   |:|||||| 
Target 5' ttggGCTGACACAGTTTCTTCCCAGt 3'
1331 - 1356 143.00 -19.30
3
miRNA  3' aaGGU-GACGAUGUUGGAGGGUcu 5'
            ||| | ||  ::::||||||  
Target 5' atCCACCCGCCTTGGTCTCCCAaa 3'
762 - 785 137.00 -20.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN509489 5 COSMIC
COSN8407236 12 COSMIC
COSN30479562 47 COSMIC
COSN30447056 48 COSMIC
COSN30513087 58 COSMIC
COSN13294806 60 COSMIC
COSN30517435 85 COSMIC
COSN30495217 115 COSMIC
COSN30479256 126 COSMIC
COSN30262474 523 COSMIC
COSN15986108 714 COSMIC
COSN7076698 941 COSMIC
COSN28631312 980 COSMIC
COSN31489962 991 COSMIC
COSN31602918 1066 COSMIC
COSN31546804 1175 COSMIC
COSN31589277 1307 COSMIC
COSN31522050 1343 COSMIC
COSN23070743 1522 COSMIC
COSN31576028 1562 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs770007983 1 dbSNP
rs757165240 4 dbSNP
rs368332732 5 dbSNP
rs1040380241 15 dbSNP
rs776942031 16 dbSNP
rs769188551 18 dbSNP
rs747582728 19 dbSNP
rs770808880 23 dbSNP
rs944681801 25 dbSNP
rs778533755 26 dbSNP
rs1363517775 29 dbSNP
rs950218024 38 dbSNP
rs375258873 40 dbSNP
rs1451657402 41 dbSNP
rs1391654323 46 dbSNP
rs371585677 47 dbSNP
rs985332431 56 dbSNP
rs1308952684 58 dbSNP
rs932510675 60 dbSNP
rs1434583044 61 dbSNP
rs1053099163 64 dbSNP
rs1235120241 68 dbSNP
rs1349456537 74 dbSNP
rs1329775314 93 dbSNP
rs1253927541 99 dbSNP
rs936004754 103 dbSNP
rs541835476 105 dbSNP
rs1264730168 110 dbSNP
rs925955840 120 dbSNP
rs1167908338 122 dbSNP
rs1186516229 123 dbSNP
rs574335075 131 dbSNP
rs777227368 140 dbSNP
rs757927535 141 dbSNP
rs562257546 155 dbSNP
rs78229835 161 dbSNP
rs1174360498 164 dbSNP
rs1426673610 173 dbSNP
rs576239619 175 dbSNP
rs1015734846 188 dbSNP
rs991850731 200 dbSNP
rs911791565 203 dbSNP
rs1477402842 211 dbSNP
rs1358710744 215 dbSNP
rs1430095141 228 dbSNP
rs960637100 237 dbSNP
rs1288272624 239 dbSNP
rs1368182157 240 dbSNP
rs1033957009 266 dbSNP
rs950522117 273 dbSNP
rs1346819035 312 dbSNP
rs778164389 321 dbSNP
rs1240436998 330 dbSNP
rs557972366 332 dbSNP
rs919015716 336 dbSNP
rs1404722047 339 dbSNP
rs1363284375 340 dbSNP
rs1484267098 345 dbSNP
rs1189939959 346 dbSNP
rs1252782847 348 dbSNP
rs973136881 357 dbSNP
rs1272866303 359 dbSNP
rs904057918 360 dbSNP
rs1378681280 365 dbSNP
rs1022480615 368 dbSNP
rs1400238933 371 dbSNP
rs1009701445 380 dbSNP
rs1351648610 383 dbSNP
rs565480718 384 dbSNP
rs892571342 386 dbSNP
rs375805804 388 dbSNP
rs1002263269 390 dbSNP
rs1217600855 399 dbSNP
rs1366989953 400 dbSNP
rs1447229806 401 dbSNP
rs944753420 407 dbSNP
rs889097713 409 dbSNP
rs1280399366 410 dbSNP
rs758721908 431 dbSNP
rs1348436088 435 dbSNP
rs1322943400 437 dbSNP
rs1212374190 440 dbSNP
rs539643053 447 dbSNP
rs1273104607 454 dbSNP
rs753064617 455 dbSNP
rs932577799 458 dbSNP
rs1307110285 461 dbSNP
rs1231430183 463 dbSNP
rs1469842965 498 dbSNP
rs1014385342 499 dbSNP
rs1360885443 502 dbSNP
rs45488200 505 dbSNP
rs1413455874 506 dbSNP
rs1393614669 507 dbSNP
rs973894681 508 dbSNP
rs1333158261 510 dbSNP
rs188556309 520 dbSNP
rs1471381090 521 dbSNP
rs1000257845 526 dbSNP
rs1383673283 526 dbSNP
rs904594895 526 dbSNP
rs1230912158 528 dbSNP
rs1293262138 528 dbSNP
rs201658224 533 dbSNP
rs1039060799 535 dbSNP
rs943360118 545 dbSNP
rs1181836870 546 dbSNP
rs1483774594 549 dbSNP
rs2065669 551 dbSNP
rs879265192 555 dbSNP
rs1211093805 558 dbSNP
rs911843834 559 dbSNP
rs535860687 560 dbSNP
rs1187272599 570 dbSNP
rs1424377070 577 dbSNP
rs992297616 590 dbSNP
rs1172664583 598 dbSNP
rs960441507 599 dbSNP
rs929125829 600 dbSNP
rs568338111 605 dbSNP
rs926266181 607 dbSNP
rs550299214 609 dbSNP
rs1311702575 611 dbSNP
rs1340541207 612 dbSNP
rs1221017316 613 dbSNP
rs1268809019 614 dbSNP
rs1268863926 615 dbSNP
rs184604210 616 dbSNP
rs1220163769 621 dbSNP
rs1281045349 627 dbSNP
rs968294138 630 dbSNP
rs1484831983 631 dbSNP
rs1210379754 644 dbSNP
rs1022532459 645 dbSNP
rs1489275823 651 dbSNP
rs1327268142 658 dbSNP
rs1009753839 667 dbSNP
rs570946900 668 dbSNP
rs926363738 669 dbSNP
rs752236178 670 dbSNP
rs1019053092 672 dbSNP
rs1009394224 676 dbSNP
rs552445588 678 dbSNP
rs980497282 691 dbSNP
rs1316912719 699 dbSNP
rs970334506 705 dbSNP
rs1447143274 706 dbSNP
rs1345306882 713 dbSNP
rs1160655653 714 dbSNP
rs1233856680 718 dbSNP
rs1050387491 719 dbSNP
rs1410845756 721 dbSNP
rs1014437849 722 dbSNP
rs1282110134 723 dbSNP
rs1446385769 725 dbSNP
rs1424801115 727 dbSNP
rs1254669411 728 dbSNP
rs956222146 735 dbSNP
rs1000756225 740 dbSNP
rs192107283 748 dbSNP
rs1156336460 758 dbSNP
rs1383554579 759 dbSNP
rs1483171041 766 dbSNP
rs898430746 769 dbSNP
rs1038236949 780 dbSNP
rs1369333086 781 dbSNP
rs939891844 788 dbSNP
rs560430378 789 dbSNP
rs1056248743 790 dbSNP
rs939108160 792 dbSNP
rs1039518655 793 dbSNP
rs1245762181 798 dbSNP
rs548151526 802 dbSNP
rs1310268197 803 dbSNP
rs1007565085 807 dbSNP
rs980453885 814 dbSNP
rs890420833 815 dbSNP
rs190755402 816 dbSNP
rs929178023 821 dbSNP
rs1238519613 827 dbSNP
rs1420526330 835 dbSNP
rs915526150 837 dbSNP
rs1387236840 839 dbSNP
rs1037563878 848 dbSNP
rs562104359 851 dbSNP
rs1326230054 855 dbSNP
rs1167811566 856 dbSNP
rs1392895669 863 dbSNP
rs1461290640 864 dbSNP
rs941851332 865 dbSNP
rs73332796 868 dbSNP
rs980891905 871 dbSNP
rs949075497 878 dbSNP
rs9804387 879 dbSNP
rs1163050530 889 dbSNP
rs1295106416 890 dbSNP
rs1332548512 892 dbSNP
rs987755723 898 dbSNP
rs1019524046 902 dbSNP
rs1009027291 915 dbSNP
rs1391394937 921 dbSNP
rs564616811 922 dbSNP
rs546414105 924 dbSNP
rs572515617 926 dbSNP
rs1029004057 928 dbSNP
rs1447784032 929 dbSNP
rs1247437232 936 dbSNP
rs1442545863 960 dbSNP
rs1189414236 961 dbSNP
rs113832034 962 dbSNP
rs9804386 980 dbSNP
rs775442762 988 dbSNP
rs1460781169 989 dbSNP
rs1297876461 991 dbSNP
rs1403153076 992 dbSNP
rs769769642 992 dbSNP
rs745531120 993 dbSNP
rs1232609621 995 dbSNP
rs574782078 997 dbSNP
rs1056705927 1008 dbSNP
rs776188583 1012 dbSNP
rs374320860 1027 dbSNP
rs1299785843 1032 dbSNP
rs1345323486 1036 dbSNP
rs897776059 1040 dbSNP
rs1254788554 1049 dbSNP
rs1037988252 1058 dbSNP
rs1195116105 1059 dbSNP
rs556634104 1063 dbSNP
rs1363858586 1065 dbSNP
rs941878240 1066 dbSNP
rs9804330 1066 dbSNP
rs139458989 1076 dbSNP
rs1044825438 1077 dbSNP
rs540248554 1082 dbSNP
rs949167286 1083 dbSNP
rs946389372 1099 dbSNP
rs1424468529 1105 dbSNP
rs1374997471 1109 dbSNP
rs1400678908 1113 dbSNP
rs1289426215 1114 dbSNP
rs914909369 1127 dbSNP
rs752283388 1130 dbSNP
rs988445147 1138 dbSNP
rs185552250 1139 dbSNP
rs1294616340 1144 dbSNP
rs1448156462 1152 dbSNP
rs1236040865 1161 dbSNP
rs1277742745 1162 dbSNP
rs935590110 1169 dbSNP
rs1346597423 1170 dbSNP
rs912123446 1190 dbSNP
rs1199604043 1205 dbSNP
rs934987627 1211 dbSNP
rs1186387186 1215 dbSNP
rs1455853602 1216 dbSNP
rs924894512 1216 dbSNP
rs1224118805 1219 dbSNP
rs988058190 1229 dbSNP
rs979382856 1236 dbSNP
rs559077528 1245 dbSNP
rs1265618485 1252 dbSNP
rs953532518 1264 dbSNP
rs968931094 1268 dbSNP
rs1029056239 1273 dbSNP
rs973454600 1274 dbSNP
rs1451555383 1295 dbSNP
rs867521538 1296 dbSNP
rs1288144223 1300 dbSNP
rs1018160444 1304 dbSNP
rs34643785 1306 dbSNP
rs963378737 1306 dbSNP
rs534006696 1323 dbSNP
rs773874412 1326 dbSNP
rs1223954897 1329 dbSNP
rs1483289147 1331 dbSNP
rs887045123 1332 dbSNP
rs368059286 1334 dbSNP
rs1034916915 1337 dbSNP
rs1202941700 1344 dbSNP
rs566520569 1356 dbSNP
rs778275444 1362 dbSNP
rs1003817968 1367 dbSNP
rs1212181272 1369 dbSNP
rs993504602 1379 dbSNP
rs767646119 1380 dbSNP
rs574369558 1384 dbSNP
rs1179113479 1387 dbSNP
rs146236645 1403 dbSNP
rs1410000493 1412 dbSNP
rs1418569202 1417 dbSNP
rs1351518282 1420 dbSNP
rs1395095564 1425 dbSNP
rs1016201099 1439 dbSNP
rs1044877953 1440 dbSNP
rs748712053 1445 dbSNP
rs192798181 1451 dbSNP
rs563798823 1471 dbSNP
rs1044900275 1475 dbSNP
rs1299522222 1478 dbSNP
rs141783490 1479 dbSNP
rs80212649 1484 dbSNP
rs912157716 1486 dbSNP
rs1052098043 1487 dbSNP
rs1375977714 1488 dbSNP
rs768908490 1500 dbSNP
rs1337628694 1504 dbSNP
rs767107917 1508 dbSNP
rs1272965165 1511 dbSNP
rs78674590 1513 dbSNP
rs922094528 1516 dbSNP
rs973506619 1526 dbSNP
rs1473018789 1527 dbSNP
rs1480375521 1531 dbSNP
rs947655420 1533 dbSNP
rs963430784 1537 dbSNP
rs1014988377 1538 dbSNP
rs983873364 1543 dbSNP
rs960057448 1544 dbSNP
rs755372873 1555 dbSNP
rs954826043 1559 dbSNP
rs754065885 1563 dbSNP
rs1256826008 1567 dbSNP
rs564656070 1568 dbSNP
rs1352369226 1581 dbSNP
rs1440970869 1583 dbSNP
rs766530163 1585 dbSNP
rs1023481634 1588 dbSNP
rs138848613 1594 dbSNP
rs1293213509 1597 dbSNP
rs1340579104 1601 dbSNP
rs893559215 1604 dbSNP
rs1271199664 1605 dbSNP
rs1307167753 1614 dbSNP
rs1254860820 1617 dbSNP
rs1211806797 1624 dbSNP
rs1052177165 1627 dbSNP
rs1484693966 1628 dbSNP
rs935014395 1632 dbSNP
rs1009575 1633 dbSNP
rs764070048 1642 dbSNP
rs776456294 1650 dbSNP
rs932240899 1661 dbSNP
rs1169455805 1667 dbSNP
rs1417062917 1675 dbSNP
rs527891815 1678 dbSNP
rs575711780 1683 dbSNP
rs1398255832 1685 dbSNP
rs1037854971 1686 dbSNP
rs1023503176 1694 dbSNP
rs1432315615 1698 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aaGGUGAC---GAUGUUGGAGGGUCu 5'
            :|||||   || | :|||||||| 
Target 5' gcUCACUGCAACUUCUGCCUCCCAG- 3'
7 - 31
2
miRNA  3' aaggugacgauguuggAGGGUCu 5'
                          ||:||| 
Target 5' ---------------aUCUCAGc 3'
1 - 8
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000478953.1 | 3UTR | AUCUCAGCUCACUGCAACUUCUGCCUCCCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
HNSC -0.939 0.11 -1.000 0.5 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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