pre-miRNA Information
pre-miRNA hsa-mir-4271   
Genomic Coordinates chr3: 49274120 - 49274186
Description Homo sapiens miR-4271 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4271
Sequence 39| GGGGGAAGAAAAGGUGGGG |57
Evidence Experimental
Experiments SOLiD
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30481495 1 COSMIC
COSN31532060 5 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs760829741 1 dbSNP
rs1277951968 2 dbSNP
rs189148716 3 dbSNP
rs757021935 4 dbSNP
rs1285201145 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MAX   
Synonyms bHLHd4
Description MYC associated factor X
Transcript NM_145113   
Other Transcripts NM_145112 , NM_002382 , NM_145114 , NM_197957   
Expression
Putative miRNA Targets on MAX
3'UTR of MAX
(miRNA target sites are highlighted)
>MAX|NM_145113|3'UTR
   1 TCAAGTTCTTTGTTCCTGGGGAATTCACTTCTCTTCCTCCCTCATGGAAGATGCAAGTAAAAGGAAATGCAAGTAACCAC
  81 CTGGTCCGTGCACTGGAGAAGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGCCTCTACAC
 161 CAACGCCAAGGGCAGCACCATCTCTGCCTTCGATGGGGGCTCGGACTCCAGCTCGGAGTCTGAGCCTGAAGAGCCCCAAA
 241 GCAGGAAGAAGCTCCGGATGGAGGCCAGCTAAGCCACTCGGGGCAGGCCAGCAATAAAAACTGTCTGTCTCCATCGTCTC
 321 ATCCTCCTTTCAGTTCGTTGGTAGAGCCCTCAGAACCATTTAAGAGACTCTTTATTTTTCTCTTTCTCCCTTTTTTTTTT
 401 AAATTTTTATTTTTACGTAGAAGCTCTTGGACAACAGCTCTCGTTCTCCTTCCCCATTTCCACTGTATATTTTTTAATGT
 481 ATTCCCTTCAGGGATTCCCTGTCCCCAACAGGAATTTTTAAACCAAAACACCCCAACTTGGCAGCTTTTTCTGTGGAGGA
 561 CAGACGGCCGGCCGGACCTCTGAGCACATAGTGTCCTGCCCACCCTACCAGCTCCTCCAGCCCTGCCGGGCACATGCCCG
 641 GGGGACGCCTGCCCTGCCCAGGTGGCCTCCTGGCCCGCCCTCACCTCTGATAGACTTTGTGAATCTGAACTGCTCTACTT
 721 TGAGAAGATGACCGGTTTGGAGTAATCAGAATGAACCCTCCTCCTTTTTAAGGGTTTTTTTTTTTTCCTTTTTCTAAAAA
 801 GCTATGTATCGCTCCTATTGAAAGACCAGATCCTTAGAGAAGTTTGTGGTATAAAAAGGAAGTGGGGACAGATTCGCAGC
 881 ACAGAGTCGCTGGCATGTTTCACTCCTGCTTCTCTCAGCCAGCTGTTTAAGCCTGCGGCGCCAGCCTCACGGAGGGCCGT
 961 GTGACACTCTCGTGGTATGTATGGGAGATGGCAGCAGTGAAGCAGCAGCCACCAGGGAGTGGCCATTTGGGGTTGGGACA
1041 GGGAGGGTGTTTTGGGTGGCATAGAGGTTTTGTATTGAGGGCCAGTGATGATGTTTTGATATTTATTTCCTGCTACTTAA
1121 ATTTGAATCTGAGTGAATTGTACCTATTTCTGATGATGTCGGTCTTGCAAAGCGACAGATTCATAAAGTAATGATGAAAT
1201 CTTTCTTTCTTCCCGTGTGTATTTCTAAGAAATAGAGCCAACTGATTTTGTATGTAAATACCAAGAGCAATTTACCTGGT
1281 ACTAAACCCGCACCCCAGTGCGGACCCTTCCCAGCCCTCATCCCACTTCCTTTCCTACTGTCCTGGAACCTGTCTCCATT
1361 GTGTGATCCAGCCCTGGTTCTGGCTGTGGTCAGCAGATGCCAGTGAAGGGTTTTGTGTGTTTAGGCCTCATTTCTTTGTC
1441 TTTTTCCTACTCCGTTCCTGGCATTTGCTGATTTCTAGTGTATACTCTGTAGTCTCAGTTCGTGTTTGATTCCATTCCAT
1521 GGAAATAAAAAGTATGTTGTACATACTGCCGAAGAATTGTCTTGCAAGTTAAGGCTTCCCCCTTTACTATAAGACTATAA
1601 ATAAAAACTTATTTTATCCTTCTTAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggGGUGGAA-AAGAAGGGGg 5'
            :| | || | ||||||| 
Target 5' gcTCTCGTTCTCCTTCCCCa 3'
437 - 456 149.00 -17.10
2
miRNA  3' ggGGUGGAAAAGAAGGGGg 5'
            :|| ||| ||||||:| 
Target 5' atTCA-CTTCTCTTCCTCc 3'
23 - 40 144.00 -19.70
3
miRNA  3' gggguggaaaaGAAGGGGg 5'
                     ||||||| 
Target 5' gcaagttaaggCTTCCCCc 3'
1564 - 1582 140.00 -16.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1191533 160 ClinVar
1120863 745 ClinVar
532509 748 ClinVar
404108 751 ClinVar
654236 752 ClinVar
959087 754 ClinVar
662134 761 ClinVar
229959 767 ClinVar
513738 768 ClinVar
232919 773 ClinVar
1000770 776 ClinVar
771108 780 ClinVar
960788 781 ClinVar
239149 782 ClinVar
759785 783 ClinVar
485703 784 ClinVar
485710 785 ClinVar
1106272 786 ClinVar
1001961 789 ClinVar
823675 789 ClinVar
404107 790 ClinVar
1131238 792 ClinVar
187544 792 ClinVar
239150 794 ClinVar
485706 794 ClinVar
882143 797 ClinVar
662389 799 ClinVar
823808 799 ClinVar
834746 802 ClinVar
532532 804 ClinVar
946631 806 ClinVar
463807 812 ClinVar
463808 813 ClinVar
823984 813 ClinVar
882142 826 ClinVar
412780 828 ClinVar
576522 829 ClinVar
841737 829 ClinVar
843760 833 ClinVar
463809 837 ClinVar
1021025 838 ClinVar
568824 841 ClinVar
824378 844 ClinVar
239151 850 ClinVar
532531 855 ClinVar
485704 856 ClinVar
568216 856 ClinVar
1100618 858 ClinVar
463810 859 ClinVar
570366 863 ClinVar
1059756 866 ClinVar
404111 867 ClinVar
404103 868 ClinVar
948950 875 ClinVar
404109 878 ClinVar
412781 879 ClinVar
1042009 882 ClinVar
1118358 882 ClinVar
463811 885 ClinVar
514278 888 ClinVar
959467 892 ClinVar
570685 896 ClinVar
1099624 912 ClinVar
774772 915 ClinVar
647774 919 ClinVar
232084 920 ClinVar
825151 928 ClinVar
313817 943 ClinVar
313816 980 ClinVar
880744 1001 ClinVar
313815 1028 ClinVar
880743 1032 ClinVar
880742 1064 ClinVar
313814 1080 ClinVar
884037 1105 ClinVar
313813 1106 ClinVar
313812 1184 ClinVar
313811 1233 ClinVar
313810 1256 ClinVar
313809 1280 ClinVar
313808 1311 ClinVar
313807 1340 ClinVar
313806 1341 ClinVar
313805 1397 ClinVar
313804 1439 ClinVar
313803 1470 ClinVar
313802 1501 ClinVar
313801 1523 ClinVar
313800 1539 ClinVar
313799 1548 ClinVar
880683 1552 ClinVar
880682 1614 ClinVar
880681 1636 ClinVar
313798 1653 ClinVar
313797 1809 ClinVar
313796 1878 ClinVar
880680 1879 ClinVar
313795 1959 ClinVar
883970 1971 ClinVar
313794 2059 ClinVar
313793 2063 ClinVar
313792 2165 ClinVar
313791 2212 ClinVar
313790 2214 ClinVar
313789 2221 ClinVar
313788 2244 ClinVar
COSN30167928 21 COSMIC
COSN13592022 31 COSMIC
COSN31606800 31 COSMIC
COSN31600130 34 COSMIC
COSN28162380 40 COSMIC
COSN28162379 41 COSMIC
COSN30125253 59 COSMIC
COSN30634295 190 COSMIC
COSN19596033 349 COSMIC
COSN28701018 449 COSMIC
COSN6542723 461 COSMIC
COSN7024265 481 COSMIC
COSN28860251 605 COSMIC
COSN24313383 711 COSMIC
COSM957094 747 COSMIC
COSM5893773 750 COSMIC
COSM6708940 751 COSMIC
COSM957093 752 COSMIC
COSM4051908 767 COSMIC
COSM433260 786 COSMIC
COSM3401415 800 COSMIC
COSM4051907 808 COSMIC
COSM4385844 812 COSMIC
COSM1607863 818 COSMIC
COSM4834782 819 COSMIC
COSM7498444 822 COSMIC
COSM6076245 824 COSMIC
COSM5769108 828 COSMIC
COSM234964 831 COSMIC
COSM6249484 846 COSMIC
COSM5420976 849 COSMIC
COSM9836213 864 COSMIC
COSM8814072 867 COSMIC
COSM4577970 878 COSMIC
COSM5920697 880 COSMIC
COSM9836212 902 COSMIC
COSM9836211 915 COSMIC
COSM9836210 920 COSMIC
COSM6340286 926 COSMIC
COSM7787471 931 COSMIC
COSM5936064 934 COSMIC
COSN32070531 941 COSMIC
COSN32070530 944 COSMIC
COSN26983864 980 COSMIC
COSN26983866 1001 COSMIC
COSN30140555 1054 COSMIC
COSN2533751 1055 COSMIC
COSN26983865 1055 COSMIC
COSN30484776 1059 COSMIC
COSN26308746 1064 COSMIC
COSN31584525 1066 COSMIC
COSN26632650 1073 COSMIC
COSN31488980 1090 COSMIC
COSN31551877 1229 COSMIC
COSN31552263 1262 COSMIC
COSN28647834 1340 COSMIC
COSN32056991 1397 COSMIC
COSN17076110 1422 COSMIC
COSN8156090 1422 COSMIC
COSN20111408 1438 COSMIC
COSN6638221 1501 COSMIC
COSN6638220 1523 COSMIC
COSN31544901 1623 COSMIC
COSN31522204 1730 COSMIC
COSN29788365 1967 COSMIC
COSN28681711 2063 COSMIC
COSN31535202 2129 COSMIC
COSN30538611 2151 COSMIC
rs4902358 1653 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1443453602 2 dbSNP
rs770035979 4 dbSNP
rs1235431317 10 dbSNP
rs748444616 12 dbSNP
rs776998398 17 dbSNP
rs371825210 21 dbSNP
rs1370344419 23 dbSNP
rs1227922176 26 dbSNP
rs1353625025 33 dbSNP
rs1328075485 38 dbSNP
rs769142713 41 dbSNP
rs368362953 43 dbSNP
rs767291215 44 dbSNP
rs778457519 44 dbSNP
rs200704092 47 dbSNP
rs756763971 50 dbSNP
rs1327351710 57 dbSNP
rs1459488775 59 dbSNP
rs1468599469 71 dbSNP
rs759298481 77 dbSNP
rs1162988634 79 dbSNP
rs1475974657 83 dbSNP
rs1312417949 84 dbSNP
rs748850378 91 dbSNP
rs1432119886 92 dbSNP
rs1187300870 113 dbSNP
rs755827986 115 dbSNP
rs1365435799 120 dbSNP
rs1384870526 120 dbSNP
rs968826358 120 dbSNP
rs1463148040 126 dbSNP
rs1324171429 134 dbSNP
rs1390045484 135 dbSNP
rs568724731 139 dbSNP
rs983723173 145 dbSNP
rs1445808350 157 dbSNP
rs190410205 160 dbSNP
rs117158067 167 dbSNP
rs1463707288 170 dbSNP
rs1270864513 171 dbSNP
rs1487977015 187 dbSNP
rs896049647 197 dbSNP
rs1252123569 200 dbSNP
rs1348276179 203 dbSNP
rs1435946315 216 dbSNP
rs1012686884 217 dbSNP
rs1164133307 222 dbSNP
rs1036368759 248 dbSNP
rs1001626223 249 dbSNP
rs752814012 250 dbSNP
rs895135790 253 dbSNP
rs1368080680 254 dbSNP
rs1032442737 257 dbSNP
rs1251619523 260 dbSNP
rs1299951880 272 dbSNP
rs1197245972 277 dbSNP
rs1000929375 281 dbSNP
rs534206787 289 dbSNP
rs1394429354 303 dbSNP
rs566235860 308 dbSNP
rs1409711366 309 dbSNP
rs185552265 325 dbSNP
rs1222560133 334 dbSNP
rs1357972076 341 dbSNP
rs1231809972 342 dbSNP
rs1293134091 343 dbSNP
rs765896539 345 dbSNP
rs1227726269 349 dbSNP
rs1252483913 351 dbSNP
rs760061399 355 dbSNP
rs1336915539 360 dbSNP
rs1204291642 363 dbSNP
rs941777323 366 dbSNP
rs943875623 369 dbSNP
rs193208971 371 dbSNP
rs1307037788 378 dbSNP
rs891074152 380 dbSNP
rs1185520436 398 dbSNP
rs570380841 401 dbSNP
rs1239259379 407 dbSNP
rs1255280309 410 dbSNP
rs1429278814 411 dbSNP
rs1049646448 413 dbSNP
rs932336434 417 dbSNP
rs1172850352 420 dbSNP
rs1377435884 424 dbSNP
rs886217539 425 dbSNP
rs1393397500 426 dbSNP
rs1429166882 430 dbSNP
rs386778349 436 dbSNP
rs919562672 438 dbSNP
rs1047374472 441 dbSNP
rs1293109316 442 dbSNP
rs1377794888 448 dbSNP
rs1413538296 449 dbSNP
rs550535889 454 dbSNP
rs1367456297 455 dbSNP
rs1382396956 456 dbSNP
rs1297303407 467 dbSNP
rs540036132 468 dbSNP
rs578098666 469 dbSNP
rs978042060 470 dbSNP
rs984064702 471 dbSNP
rs747933307 480 dbSNP
rs925104920 481 dbSNP
rs1364806929 482 dbSNP
rs1208654272 483 dbSNP
rs879734777 489 dbSNP
rs776894786 490 dbSNP
rs1266263786 510 dbSNP
rs1199650092 511 dbSNP
rs530754308 518 dbSNP
rs1188104340 526 dbSNP
rs991059421 530 dbSNP
rs1449165034 540 dbSNP
rs1194326403 541 dbSNP
rs1396983098 542 dbSNP
rs959380620 542 dbSNP
rs1433333154 547 dbSNP
rs1032307130 549 dbSNP
rs1176013521 568 dbSNP
rs988800495 569 dbSNP
rs1000960649 570 dbSNP
rs1287530141 577 dbSNP
rs1283243078 584 dbSNP
rs1215885026 588 dbSNP
rs960322845 594 dbSNP
rs1351269167 602 dbSNP
rs966815680 604 dbSNP
rs1021033762 606 dbSNP
rs561646294 634 dbSNP
rs541677614 637 dbSNP
rs1311351644 638 dbSNP
rs970319874 642 dbSNP
rs1405715852 643 dbSNP
rs1016375993 647 dbSNP
rs1296417246 672 dbSNP
rs1050119604 673 dbSNP
rs996694633 675 dbSNP
rs1214562633 676 dbSNP
rs898168939 687 dbSNP
rs1037966550 689 dbSNP
rs1399976166 692 dbSNP
rs570912983 693 dbSNP
rs1160750476 694 dbSNP
rs1253638939 703 dbSNP
rs1215638013 708 dbSNP
rs752482677 711 dbSNP
rs767476769 713 dbSNP
rs774324946 715 dbSNP
rs374495103 718 dbSNP
rs1157357204 719 dbSNP
rs751489116 721 dbSNP
rs766364903 724 dbSNP
rs762903091 727 dbSNP
rs908323739 731 dbSNP
rs1438108213 732 dbSNP
rs760244573 734 dbSNP
rs765385240 736 dbSNP
rs1326199848 750 dbSNP
rs762084527 751 dbSNP
rs776978293 752 dbSNP
rs769051095 767 dbSNP
rs761220254 768 dbSNP
rs949597477 770 dbSNP
rs997155565 771 dbSNP
rs876660073 773 dbSNP
rs1373955637 774 dbSNP
rs775808138 782 dbSNP
rs772661746 783 dbSNP
rs748675729 784 dbSNP
rs1477107672 785 dbSNP
rs1234074950 788 dbSNP
rs1060500100 790 dbSNP
rs786203812 792 dbSNP
rs772912674 794 dbSNP
rs145657754 796 dbSNP
rs769555911 797 dbSNP
rs1414936007 798 dbSNP
rs1186625283 799 dbSNP
rs747874757 801 dbSNP
rs1483314784 802 dbSNP
rs1175991420 810 dbSNP
rs80206158 812 dbSNP
rs368367806 814 dbSNP
rs1204219897 825 dbSNP
rs754773930 827 dbSNP
rs370238588 828 dbSNP
rs779789251 829 dbSNP
rs758370305 830 dbSNP
rs762809 846 dbSNP
rs750459929 850 dbSNP
rs765370870 855 dbSNP
rs201312694 856 dbSNP
rs1354621995 858 dbSNP
rs140490467 859 dbSNP
rs764320975 861 dbSNP
rs17852278 862 dbSNP
rs771696396 863 dbSNP
rs1176118785 866 dbSNP
rs559090673 867 dbSNP
rs772397458 868 dbSNP
rs1159227189 875 dbSNP
rs760147253 878 dbSNP
rs145787299 879 dbSNP
rs773818427 882 dbSNP
rs1181165143 884 dbSNP
rs1485899939 885 dbSNP
rs1259526031 891 dbSNP
rs747778554 897 dbSNP
rs1441783757 899 dbSNP
rs546006873 909 dbSNP
rs1203172320 915 dbSNP
rs768360710 919 dbSNP
rs876659544 920 dbSNP
rs577250499 922 dbSNP
rs779958074 928 dbSNP
rs199514174 943 dbSNP
rs371163654 944 dbSNP
rs757275635 946 dbSNP
rs898451962 947 dbSNP
rs753946497 948 dbSNP
rs1446384841 954 dbSNP
rs1359129619 958 dbSNP
rs764231017 961 dbSNP
rs1402574606 964 dbSNP
rs1409993485 967 dbSNP
rs989304841 970 dbSNP
rs377672300 972 dbSNP
rs1158792378 974 dbSNP
rs1475405579 975 dbSNP
rs189378334 976 dbSNP
rs752990188 977 dbSNP
rs767990726 980 dbSNP
rs574694307 988 dbSNP
rs1415381767 995 dbSNP
rs555310314 998 dbSNP
rs767026780 1000 dbSNP
rs566299166 1001 dbSNP
rs1364403243 1004 dbSNP
rs768181102 1011 dbSNP
rs1226270175 1012 dbSNP
rs1320861139 1016 dbSNP
rs45604339 1028 dbSNP
rs1405889920 1031 dbSNP
rs949792280 1032 dbSNP
rs1006315440 1036 dbSNP
rs1276903085 1037 dbSNP
rs781284159 1038 dbSNP
rs755872975 1044 dbSNP
rs61987406 1052 dbSNP
rs183519331 1053 dbSNP
rs997670059 1054 dbSNP
rs1451012208 1055 dbSNP
rs918089161 1060 dbSNP
rs539193441 1064 dbSNP
rs1007255390 1065 dbSNP
rs1038706694 1065 dbSNP
rs570519075 1065 dbSNP
rs1421046842 1066 dbSNP
rs1169464290 1067 dbSNP
rs550353151 1073 dbSNP
rs191382960 1080 dbSNP
rs1043673496 1081 dbSNP
rs1296890474 1093 dbSNP
rs945370946 1095 dbSNP
rs1371860744 1097 dbSNP
rs1237085113 1100 dbSNP
rs913879323 1101 dbSNP
rs567680521 1105 dbSNP
rs762709691 1106 dbSNP
rs955450872 1107 dbSNP
rs548097455 1117 dbSNP
rs528344752 1121 dbSNP
rs569443301 1127 dbSNP
rs1205308456 1131 dbSNP
rs1456242869 1135 dbSNP
rs1056334063 1148 dbSNP
rs1256436624 1157 dbSNP
rs1454349343 1163 dbSNP
rs1200431704 1165 dbSNP
rs559154342 1184 dbSNP
rs1340175317 1192 dbSNP
rs938754099 1194 dbSNP
rs1271993133 1211 dbSNP
rs1158871796 1220 dbSNP
rs1390569562 1226 dbSNP
rs545967055 1229 dbSNP
rs561525266 1233 dbSNP
rs1016819639 1234 dbSNP
rs1443160802 1237 dbSNP
rs563806450 1238 dbSNP
rs1331017217 1252 dbSNP
rs1240399713 1255 dbSNP
rs750680125 1256 dbSNP
rs543510655 1257 dbSNP
rs574901784 1260 dbSNP
rs1267074010 1271 dbSNP
rs561238353 1280 dbSNP
rs894266780 1289 dbSNP
rs1055531803 1291 dbSNP
rs1264670540 1292 dbSNP
rs909433010 1294 dbSNP
rs541774297 1298 dbSNP
rs186938615 1303 dbSNP
rs558927088 1304 dbSNP
rs1160920259 1307 dbSNP
rs1472456340 1310 dbSNP
rs539220905 1311 dbSNP
rs1185306377 1312 dbSNP
rs576515287 1326 dbSNP
rs4902359 1340 dbSNP
rs1310411969 1341 dbSNP
rs45440292 1341 dbSNP
rs986853648 1346 dbSNP
rs1425126421 1347 dbSNP
rs1181437998 1348 dbSNP
rs765324569 1356 dbSNP
rs1007202903 1369 dbSNP
rs1246539360 1370 dbSNP
rs1263123821 1390 dbSNP
rs921387534 1396 dbSNP
rs183428804 1397 dbSNP
rs1022009842 1398 dbSNP
rs142514289 1416 dbSNP
rs1181169009 1418 dbSNP
rs1257979454 1420 dbSNP
rs1208155115 1422 dbSNP
rs1367916999 1424 dbSNP
rs1462540520 1425 dbSNP
rs1302817511 1430 dbSNP
rs1358765519 1430 dbSNP
rs886050633 1439 dbSNP
rs1056683944 1441 dbSNP
rs534638682 1450 dbSNP
rs1397370915 1451 dbSNP
rs1456838930 1451 dbSNP
rs75125987 1451 dbSNP
rs879015516 1451 dbSNP
rs1248731856 1452 dbSNP
rs1375220722 1458 dbSNP
rs1279333771 1460 dbSNP
rs1227516818 1467 dbSNP
rs886050632 1470 dbSNP
rs1442539186 1472 dbSNP
rs1337140328 1474 dbSNP
rs951366615 1475 dbSNP
rs1179949179 1476 dbSNP
rs1255694407 1482 dbSNP
rs1429405972 1489 dbSNP
rs755449382 1495 dbSNP
rs1957948 1501 dbSNP
rs1388407927 1506 dbSNP
rs1449351692 1513 dbSNP
rs907269911 1518 dbSNP
rs1957949 1523 dbSNP
rs1034110887 1532 dbSNP
rs999921619 1538 dbSNP
rs117802316 1539 dbSNP
rs1043882534 1540 dbSNP
rs886050631 1548 dbSNP
rs192895631 1552 dbSNP
rs188473061 1553 dbSNP
rs1301866769 1563 dbSNP
rs1313918781 1567 dbSNP
rs1207749754 1572 dbSNP
rs1255207984 1573 dbSNP
rs1486279781 1581 dbSNP
rs1210855905 1585 dbSNP
rs1051770227 1595 dbSNP
rs1407069924 1600 dbSNP
rs1464485286 1601 dbSNP
rs530195656 1603 dbSNP
rs934021031 1614 dbSNP
rs921242081 1615 dbSNP
rs1039765392 1622 dbSNP
rs941414068 1623 dbSNP
rs1457402340 1631 dbSNP
rs1471007976 1635 dbSNP
rs909960054 1635 dbSNP
rs139403325 1636 dbSNP
rs1293675431 1650 dbSNP
rs4902358 1653 dbSNP
rs767195877 1657 dbSNP
rs917204991 1664 dbSNP
rs985876075 1665 dbSNP
rs761415347 1676 dbSNP
rs958419048 1678 dbSNP
rs1022365821 1683 dbSNP
rs866488769 1700 dbSNP
rs1464671164 1703 dbSNP
rs1214389281 1707 dbSNP
rs572823925 1712 dbSNP
rs1487751009 1717 dbSNP
rs565577617 1725 dbSNP
rs1225419134 1729 dbSNP
rs773871859 1730 dbSNP
rs968491035 1731 dbSNP
rs1157452652 1736 dbSNP
rs545338165 1738 dbSNP
rs1020043645 1739 dbSNP
rs1352143200 1741 dbSNP
rs1456430604 1746 dbSNP
rs1284076995 1749 dbSNP
rs1164789211 1750 dbSNP
rs1224698090 1754 dbSNP
rs1434152207 1762 dbSNP
rs1009761370 1769 dbSNP
rs768156086 1772 dbSNP
rs1411428186 1775 dbSNP
rs1403896431 1777 dbSNP
rs576595284 1779 dbSNP
rs1051369203 1783 dbSNP
rs1286294702 1795 dbSNP
rs1328687328 1795 dbSNP
rs998803876 1796 dbSNP
rs899851478 1806 dbSNP
rs1320020171 1809 dbSNP
rs183467855 1809 dbSNP
rs941361616 1810 dbSNP
rs775566276 1823 dbSNP
rs1049514372 1824 dbSNP
rs770290869 1825 dbSNP
rs1251560358 1826 dbSNP
rs1472038026 1831 dbSNP
rs1182107752 1836 dbSNP
rs1415575352 1838 dbSNP
rs929341257 1840 dbSNP
rs919474034 1847 dbSNP
rs749253966 1850 dbSNP
rs1431571048 1854 dbSNP
rs1402265201 1855 dbSNP
rs1422741271 1865 dbSNP
rs147351293 1870 dbSNP
rs1480214935 1873 dbSNP
rs1349680238 1876 dbSNP
rs886050630 1878 dbSNP
rs111875569 1879 dbSNP
rs1377291916 1885 dbSNP
rs1487315243 1901 dbSNP
rs1275514291 1914 dbSNP
rs1242047056 1916 dbSNP
rs1217077075 1926 dbSNP
rs574183061 1931 dbSNP
rs1276914655 1932 dbSNP
rs1274306582 1942 dbSNP
rs1443334126 1943 dbSNP
rs1212734276 1945 dbSNP
rs554188238 1946 dbSNP
rs375343995 1953 dbSNP
rs1182384489 1954 dbSNP
rs1390263215 1957 dbSNP
rs886050629 1959 dbSNP
rs1451205929 1963 dbSNP
rs866730684 1965 dbSNP
rs1020058503 1966 dbSNP
rs1336007507 1970 dbSNP
rs1357628064 1971 dbSNP
rs1447592259 1977 dbSNP
rs915018771 1978 dbSNP
rs1367470383 1979 dbSNP
rs1323794821 1981 dbSNP
rs988185683 1988 dbSNP
rs1284746502 1994 dbSNP
rs534319833 2001 dbSNP
rs1035307881 2002 dbSNP
rs769606544 2006 dbSNP
rs564165542 2024 dbSNP
rs1003411536 2035 dbSNP
rs969308051 2036 dbSNP
rs565294694 2045 dbSNP
rs1023410011 2049 dbSNP
rs552459072 2059 dbSNP
rs4902357 2063 dbSNP
rs1049158074 2067 dbSNP
rs1335835481 2075 dbSNP
rs374841496 2080 dbSNP
rs144346635 2088 dbSNP
rs900130967 2091 dbSNP
rs1414074203 2098 dbSNP
rs1039912813 2104 dbSNP
rs1391163295 2113 dbSNP
rs775846863 2117 dbSNP
rs781106740 2118 dbSNP
rs1332125964 2131 dbSNP
rs1469534275 2133 dbSNP
rs1273405941 2134 dbSNP
rs1430259398 2137 dbSNP
rs897824819 2149 dbSNP
rs531320502 2152 dbSNP
rs1268333476 2153 dbSNP
rs530258164 2153 dbSNP
rs1206266826 2157 dbSNP
rs1426845180 2159 dbSNP
rs1418829441 2160 dbSNP
rs1005535204 2161 dbSNP
rs562514408 2165 dbSNP
rs1047162863 2166 dbSNP
rs1479970912 2179 dbSNP
rs1241751062 2184 dbSNP
rs1203451642 2187 dbSNP
rs1461995284 2188 dbSNP
rs758729000 2198 dbSNP
rs1264652929 2199 dbSNP
rs1391588533 2209 dbSNP
rs748335228 2212 dbSNP
rs541851564 2214 dbSNP
rs1057392096 2215 dbSNP
rs886050628 2221 dbSNP
rs1376869199 2232 dbSNP
rs1314220876 2240 dbSNP
rs769706098 2242 dbSNP
rs527697025 2244 dbSNP
rs927218983 2246 dbSNP
rs946883932 2258 dbSNP
rs140385876 2286 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggGGUGGAA-AAGAAGGGGg 5'
            :| | || | ||||||| 
Target 5' gcUCUCGUUCUCCUUCCCCa 3'
7 - 26
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000284165.6 | 3UTR | ACAACAGCUCUCGUUCUCCUUCCCCAUUUCCACUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
181 hsa-miR-4271 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066209 MARCH9 membrane associated ring-CH-type finger 9 2 2
MIRT079367 CCDC137 coiled-coil domain containing 137 2 2
MIRT081183 MIDN midnolin 2 4
MIRT083278 ZCCHC3 zinc finger CCHC-type containing 3 2 6
MIRT086207 HOXD13 homeobox D13 2 2
MIRT133713 SKI SKI proto-oncogene 2 4
MIRT150653 SLC27A1 solute carrier family 27 member 1 2 2
MIRT159166 NRBP1 nuclear receptor binding protein 1 2 2
MIRT160059 TET3 tet methylcytosine dioxygenase 3 2 4
MIRT180856 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT181931 MARK2 microtubule affinity regulating kinase 2 2 2
MIRT190628 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT190654 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT196107 MPRIP myosin phosphatase Rho interacting protein 2 2
MIRT263248 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT321168 EIF4H eukaryotic translation initiation factor 4H 2 2
MIRT338624 SHMT2 serine hydroxymethyltransferase 2 2 2
MIRT366301 GDI1 GDP dissociation inhibitor 1 2 4
MIRT375172 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT441488 NCEH1 neutral cholesterol ester hydrolase 1 2 2
MIRT442333 WNT9B Wnt family member 9B 2 2
MIRT443889 CNKSR3 CNKSR family member 3 2 2
MIRT445880 WBP1L WW domain binding protein 1 like 2 2
MIRT449312 MRO maestro 2 2
MIRT449844 BCL2L13 BCL2 like 13 2 2
MIRT450304 DRAXIN dorsal inhibitory axon guidance protein 2 2
MIRT450515 EMX1 empty spiracles homeobox 1 2 2
MIRT451243 ZNF444 zinc finger protein 444 2 2
MIRT451713 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT451792 TLR5 toll like receptor 5 2 2
MIRT451823 ALDH3B1 aldehyde dehydrogenase 3 family member B1 2 2
MIRT451906 ILK integrin linked kinase 2 2
MIRT452181 KIAA1456 KIAA1456 2 4
MIRT452242 TRAM1 translocation associated membrane protein 1 2 2
MIRT452544 ZNF467 zinc finger protein 467 2 2
MIRT452605 REPIN1 replication initiator 1 2 2
MIRT454505 ZFYVE27 zinc finger FYVE-type containing 27 2 2
MIRT454657 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT455354 KDM5C lysine demethylase 5C 2 2
MIRT455452 EPB41L4B erythrocyte membrane protein band 4.1 like 4B 2 2
MIRT455587 TAF12 TATA-box binding protein associated factor 12 2 2
MIRT456501 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 2 2
MIRT456815 PIGP phosphatidylinositol glycan anchor biosynthesis class P 2 2
MIRT457425 NOL10 nucleolar protein 10 2 2
MIRT457468 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457660 SERINC1 serine incorporator 1 2 2
MIRT458231 NXPH3 neurexophilin 3 2 2
MIRT458374 ITM2C integral membrane protein 2C 2 2
MIRT458667 GPR35 G protein-coupled receptor 35 2 2
MIRT459665 VPS37C VPS37C, ESCRT-I subunit 2 2
MIRT459825 TPP1 tripeptidyl peptidase 1 2 2
MIRT460564 FEM1A fem-1 homolog A 2 2
MIRT460725 ASXL3 additional sex combs like 3, transcriptional regulator 2 2
MIRT461121 RAB36 RAB36, member RAS oncogene family 2 2
MIRT461529 C14orf1 ergosterol biosynthesis 28 homolog 2 2
MIRT461750 DDX11 DEAD/H-box helicase 11 2 2
MIRT462570 STS steroid sulfatase 2 2
MIRT462798 NTN1 netrin 1 2 2
MIRT463030 ZNF689 zinc finger protein 689 2 2
MIRT463991 WDTC1 WD and tetratricopeptide repeats 1 2 2
MIRT464684 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 2
MIRT465439 TP53 tumor protein p53 2 2
MIRT465512 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT465649 TNPO2 transportin 2 2 10
MIRT465947 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 2
MIRT466028 TMEM189 transmembrane protein 189 2 2
MIRT468076 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 6
MIRT468131 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT468498 SESN2 sestrin 2 2 2
MIRT468879 RREB1 ras responsive element binding protein 1 2 2
MIRT469318 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT469558 RARA retinoic acid receptor alpha 2 2
MIRT469793 RAB15 RAB15, member RAS oncogene family 2 2
MIRT469896 PTRF caveolae associated protein 1 2 2
MIRT470235 PRRC2A proline rich coiled-coil 2A 2 2
MIRT470808 PLXND1 plexin D1 2 2
MIRT471597 PAQR5 progestin and adipoQ receptor family member 5 2 10
MIRT471710 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT471752 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 2 2
MIRT472978 MRRF mitochondrial ribosome recycling factor 2 2
MIRT473538 MAX MYC associated factor X 2 2
MIRT473581 MAT2A methionine adenosyltransferase 2A 2 2
MIRT473970 LRRC58 leucine rich repeat containing 58 2 2
MIRT474223 LCOR ligand dependent nuclear receptor corepressor 2 4
MIRT474553 KLHDC3 kelch domain containing 3 2 2
MIRT474777 KIAA0895L KIAA0895 like 2 2
MIRT476042 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT476438 GBA2 glucosylceramidase beta 2 2 2
MIRT477773 E2F3 E2F transcription factor 3 2 4
MIRT477946 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478782 CRTC2 CREB regulated transcription coactivator 2 2 2
MIRT479320 VPS72 vacuolar protein sorting 72 homolog 2 2
MIRT480405 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT480593 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT480963 BBC3 BCL2 binding component 3 2 2
MIRT481127 AZIN1 antizyme inhibitor 1 2 4
MIRT481444 ARRB2 arrestin beta 2 2 2
MIRT481687 AR androgen receptor 2 2
MIRT481730 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482386 AEN apoptosis enhancing nuclease 2 2
MIRT482564 ABHD2 abhydrolase domain containing 2 2 2
MIRT482605 ABHD14B abhydrolase domain containing 14B 2 2
MIRT483256 CITED4 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 2 4
MIRT483531 TAGLN2 transgelin 2 2 2
MIRT483840 UNC5B unc-5 netrin receptor B 2 4
MIRT483935 LENG8 leukocyte receptor cluster member 8 2 4
MIRT484414 SNX19 sorting nexin 19 2 2
MIRT484487 SLC9A1 solute carrier family 9 member A1 2 2
MIRT484609 SIX3 SIX homeobox 3 2 6
MIRT484703 RNF11 ring finger protein 11 2 2
MIRT485244 POGZ pogo transposable element derived with ZNF domain 2 2
MIRT485607 FOSL1 FOS like 1, AP-1 transcription factor subunit 2 4
MIRT485965 RTBDN retbindin 2 2
MIRT487308 GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein 2 2
MIRT487329 SREBF1 sterol regulatory element binding transcription factor 1 2 4
MIRT487410 CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 2 2
MIRT487607 C20orf96 chromosome 20 open reading frame 96 2 2
MIRT487689 CDK14 cyclin dependent kinase 14 2 2
MIRT487787 GPR20 G protein-coupled receptor 20 2 4
MIRT488026 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT488476 B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 2 2
MIRT488761 FXYD1 FXYD domain containing ion transport regulator 1 2 2
MIRT489161 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489529 MRE11A MRE11 homolog, double strand break repair nuclease 2 8
MIRT489774 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489878 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT490094 FN3K fructosamine 3 kinase 2 2
MIRT490202 PKNOX2 PBX/knotted 1 homeobox 2 2 2
MIRT490283 ISL2 ISL LIM homeobox 2 2 2
MIRT490377 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT491035 ALPK3 alpha kinase 3 2 2
MIRT491186 JUND JunD proto-oncogene, AP-1 transcription factor subunit 2 4
MIRT491766 ZNF385A zinc finger protein 385A 2 2
MIRT491888 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 2 2
MIRT491981 UNK unkempt family zinc finger 2 2
MIRT492400 SDK1 sidekick cell adhesion molecule 1 2 2
MIRT493647 HDLBP high density lipoprotein binding protein 2 2
MIRT494010 DUSP9 dual specificity phosphatase 9 2 2
MIRT494167 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 2
MIRT495712 PADI1 peptidyl arginine deiminase 1 2 2
MIRT496873 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT499175 RBPJL recombination signal binding protein for immunoglobulin kappa J region like 2 2
MIRT501652 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT506645 MAPK1 mitogen-activated protein kinase 1 2 4
MIRT510590 TUBB2A tubulin beta 2A class IIa 2 6
MIRT511907 FKBP1A FK506 binding protein 1A 2 2
MIRT513063 ANKRD45 ankyrin repeat domain 45 2 2
MIRT513104 DYNAP dynactin associated protein 2 2
MIRT521804 POM121C POM121 transmembrane nucleoporin C 2 2
MIRT523520 GLUL glutamate-ammonia ligase 2 2
MIRT525085 FRK fyn related Src family tyrosine kinase 2 2
MIRT530930 SCIN scinderin 2 2
MIRT533501 TRIM71 tripartite motif containing 71 2 2
MIRT538560 CECR2 CECR2, histone acetyl-lysine reader 2 2
MIRT544556 CSNK2A1 casein kinase 2 alpha 1 2 2
MIRT555912 ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 2 2
MIRT560405 TMEM69 transmembrane protein 69 2 2
MIRT560664 RTN3 reticulon 3 2 2
MIRT564061 CDT1 chromatin licensing and DNA replication factor 1 2 2
MIRT565504 SP1 Sp1 transcription factor 2 2
MIRT570014 COL1A2 collagen type I alpha 2 chain 2 2
MIRT572321 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT573229 TRIM21 tripartite motif containing 21 2 2
MIRT573487 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT574137 MARVELD1 MARVEL domain containing 1 2 2
MIRT574323 ZNF703 zinc finger protein 703 2 2
MIRT620939 OSMR oncostatin M receptor 2 2
MIRT650080 MTL5 testis expressed metallothionein like protein 2 2
MIRT684553 ZNF708 zinc finger protein 708 2 2
MIRT685841 ANGEL1 angel homolog 1 2 2
MIRT688551 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT701985 MIER3 MIER family member 3 2 2
MIRT703899 EPT1 selenoprotein I 2 2
MIRT706388 MC2R melanocortin 2 receptor 2 2
MIRT707487 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT711885 INSIG2 insulin induced gene 2 2 2
MIRT719164 KIF6 kinesin family member 6 2 2
MIRT721294 C3orf36 chromosome 3 open reading frame 36 2 2
MIRT721775 ARL6IP4 ADP ribosylation factor like GTPase 6 interacting protein 4 2 2
MIRT723763 NKIRAS2 NFKB inhibitor interacting Ras like 2 2 2
MIRT725485 GPR26 G protein-coupled receptor 26 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miR-4271 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4271 Cisplatin 5460033 NSC119875 approved sensitive High Gastric Cancer cell line (BGC823)
hsa-miR-4271 Platinum-based doublet chemotherapy sensitive High Lung Adenocarcinoma tissue
hsa-miR-4271 Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4271 Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PATU8988)
hsa-miR-4271 Cisplatin 5460033 NSC119875 approved resistant Low Tongue Squamous Cell Carcinoma cell line (CAL-27, SCC-9)
hsa-miR-4271 Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (H460)
hsa-miR-4271 Anlotinib 25017411 NSC832523 sensitive Low Non-Small Cell Lung Cancer cell line (A549, PDC, H460)
hsa-miR-4271 Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (A549, PDC, H460)
hsa-miR-4271 Icotinib 22024915 NSC800770 sensitive Low Non-Small Cell Lung Cancer cell line (A549, PDC, H460)
hsa-miR-4271 Erlotinib 176870 NSC718781 approved sensitive Low Non-Small Cell Lung Cancer cell line (A549, PDC, H460)
hsa-mir-4271 Cisplatin 5460033 NSC119875 approved resistant cell line (W1)
hsa-mir-4271 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-4271 Androstenedione+Anastrozole resistant cell line (MCF-7)
hsa-mir-4271 Androstenedione+Letrozole resistant cell line (MCF-7)
hsa-mir-4271 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-mir-4271 Cisplatin 5460033 NSC119875 approved sensitive cell line (BGC-823)
hsa-miR-4271 Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (cytosolic RNA)
hsa-miR-4271 Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (total RNA)
hsa-miR-4271 Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-4271 Platinum-based doublet chemotherapy sensitive tissue (lung adenocarcinoma)
hsa-miR-4271 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4271 Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM16)
hsa-miR-4271 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4271 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (100 ng/ml)
hsa-miR-4271 Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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