miRTarBase - #MIRT474153


—
pre-miRNA Information
pre-miRNA hsa-mir-499a   
Genomic Coordinates chr20: 34990376 - 34990497
Description Homo sapiens miR-499a stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-499a-3p
Sequence 70| AACAUCACAGCAAGUCUGUGCU |91
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30512073 1 COSMIC
COSN8868602 4 COSMIC
COSN20079766 19 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs768246420 3 dbSNP
rs3746444 4 dbSNP
rs761417578 6 dbSNP
rs150018420 8 dbSNP
rs1406470841 9 dbSNP
rs772652105 11 dbSNP
rs1189840352 16 dbSNP
rs759966338 17 dbSNP
rs1475405341 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LIFR   
Synonyms CD118, LIF-R, SJS2, STWS, SWS
Description LIF receptor alpha
Transcript NM_002310   
Other Transcripts NM_001127671   
Expression
Putative miRNA Targets on LIFR
3'UTR of LIFR
(miRNA target sites are highlighted)		 
>LIFR|NM_002310|3'UTR
   1 CAGTGTCACCGTGTCACTTCAGTCAGCCATCTCAATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTT
  81 GGAGGGATCCTGTGAAGTATTGTTAGGAGGTGAACTTCACTACATGTTAAGTTACACTGAAAGTGTTCATGTGCTTTTAA
 161 TGTAGTCTAAAAGCCAAAGTATAGTGACTCAGAATCCTCAATCCACAAAACTCAAGATTGGGAGCTCTTTGTGATCAAGC
 241 CAAAGAATTCTCATGTACTCTACCTTCAAGAAGCATTTCAAGGCTAATACCTACTTGTACGTACATGTAAAACAAATCCC
 321 GCCGCAACTGTTTTCTGTTCTGTTGTTTGTGGTTTTCTCATGTGTATACTTGGTGGAATTGTAAGTGGATTTGCAGGCCA
 401 GGGAGAAAATGTCCAAGTAACAGGTGAAGTTTATTTGCCTGACGTTTACTCCTTTCTAGATGAAAACCAAGCACAGATTT
 481 TAAAACTTCTAAGATTATTCTCCTCTATCCACAGCATTCACAAAAATTAATATAATTTTTAATGTAGTGACAGCGATTTA
 561 GTGTTTTGTTTGATAAAGTATGCTTATTTCTGTGCCTACTGTATAATGGTTATCAAACAGTTGTCTCAGGGGTACAAACT
 641 TTGAAAACAAGTGTGACACTGACCAGCCCAAATCATAATCATGTTTTCTTGCTGTGATAGGTTTTGCAAGCCTTTTCATT
 721 ATTTTTTAGCTTTTATGCTTGCTTCCATTATTTCAGTTGGTTGCCCTAATATTTAAAATTTACACTTCTAAGACTAGAGA
 801 CCCACATTTTTTAAAAATCATTTTATTTTGTGATACAGTGACAGCTTTATATGAGCAAATTCAATATTATTCATAAGCAT
 881 GTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGCGTTAGCTGTCCATATAGTTCTGATTGGA
 961 TTTCGTTCCTCCTGAGGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTTCTGGTGGATGT
1041 TCCTCCCACTCATGAGTCTTTTCATCATGCCACATTATCTGATCCAGTCCTCACATTTTTAAATATAAAACTAAAGAGAG
1121 AATGCTTCTTACAGGAACAGTTACCCAAGGGCTGTTTCTTAGTAACTGTCATAAACTGATCTGAATCCATGGGCATACCT
1201 GTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTGCCCACCCTTGTT
1281 TCTCATAAGCGATGTCTGGAGTGATTGTGGTTCTTGGAAAAGCAGAAGGAAAAACTAAAAAGTGTATCTTGTATTTTCCC
1361 TGCCCTCAGGTTGCCTATGTATTTTACCTTTTCATATTTAAGGCAAAAGTACTTGAAAATTTTAAGTGTCCGAATAAGAT
1441 ATGTCTTTTTTGTTTGTTTTTTTTGGTTGTTTGTTTGTTTTTTATCATCTGAGATTCTGTAATGTATTTGCAAATAATGG
1521 ATCAATTAATTTTTTTTGAAGCTCATATTGTATCTTTTTAAAAACCATGTTGTGGAAAAAAGCCAGAGTGACAAGTGACA
1601 AAATCTATTTAGGTTCTCTGTGTATGAATCCTGATTTTAACTGCTAGGATTCAGCTAAATTTCTGAGCTTTATGATCTGT
1681 GGAAATTTGGAATGAAATGCAATTCATTTTGTACATACATAGTATATTAAAACTATATAATAGTTCATAGAAATGTTCAG
1761 TAATGAAAAATATATCCAATCAGAGCCATCCCTAAAGAGTGTTCTCTTGTCTTCCTTTGTATCCTCTTTGGCTCCTTCCC
1841 TTAGCTTCCACCCCAGACATCAGACCTGGGGCTGCCTTCTCTCCCTGCCAAAGCTTGCTGTTAGCATTGTCTGCTTGCCC
1921 TCAACTCCTGCCTTGTTCCCTGTTGAAATGTATCAATCCCGTACTTTATCTCTCCAGGACAAGGATAAGTGTGGCTACAG
2001 TAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAGATAATGAGAAAAGGCCAGAAGAGATTGTTTGATCTCTGTCTGTCA
2081 ATATATATGCATTTCAACTGTGACCATCTGGATCCAGGGCCCTTTCTAACCTATATAACGACTCATTTGTTTGGTTAATG
2161 ATGAATATCACTGGGGCTCTTAAGTCCTTTCGTTCTATCCAAGACTTCATTGTTTTTTTCTGTATGAAAAAAGTGCAGAA
2241 TATCACTCACCTTTCCCCTACTTTTGGATCCCCTACACGAGGATCACTAGCTTAATGAGAAGCAGAGTAACGCTATTAAG
2321 TCTGGGCAAGCTCCTTATAAGTTGCTGTGTGCTTAAAAGAATGTGATTTATGTCTGGGGCCAAAGCAGTTTTCCTTCTTT
2401 TCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAGGATATTACCTCTACTCCCCCCAACCTGTGTGTGTA
2481 GGGAGAGTAACAACACGGGAAGAGGGGAGGGAAGTTGGAAGGAGATTGGTCACATGTTCAGTTGTCTGAGATACTGGTAA
2561 ATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCTCATACTGATTGTGCTCTGTCCAGTTAGA
2641 TTCGTGGCTTCTCCCTTGGAAGCTACAATTAAGGACTAGTTAGAAGCAGAGGCTAGATGTGTTCTCTCCAGCCCTTACTA
2721 ACTGGGAAAATAATTGAGAAATCCCTCTTTTCCTCAGTGAAAGCCCAGTCATTGGTTAGAAAAATCTAATTGTCAAACTA
2801 GCATTATGTTCCATCATATCTGTGGGATAGTAATTCATGTAAGACACATTTTTACCTCTCTTACAAGTCAATTCACTTAC
2881 AAGCCAGTTTCAAATCAAGCTTCCCTTGCGAGGAATGGAGATCATTATGGGGCTTATTATGACTACATTTCTTTTATGAG
2961 TGACCATTTTAAATAATTAATATTTTATTTAATATTAAATTATTAAAGACTTAGCTAGACTTTTAACATTAGATGAACCT
3041 TGTGAATCATATATTGCATAGATTAGCACATGTATGCAATCTAGGTCATCAATTTGTTGAATTTATACAGCCCTAGATTT
3121 GAGATTGTGGCCCTGAGTATCTGGATAGTTGAGTTGTGTGTTTATGTGCTTATATGATAGAGGTGCTTTGTTCCTGCAGC
3201 TTAGAAACAGAAGCAGCCATTCACTGAGAAGCTTAAGAGAGGAAGTATCAACCTCATTTTCCAAACCAGCATTACTTTCA
3281 CCGCTCGTGGATCTGAAAGATTACATTTAGAACATTTAGTACTATTACACTCTCAGAAACTGTGGTAAAAAGTCACATTT
3361 TCAAAACTTCATGCATATTGTATTCTTGTTGGAAATAAGTCCTATAGTTTCTTAATTGTCTTCATGCCGTCCATATTTAA
3441 CAAACATTGCAAGTCCTTTTTATATTTGGGTAATTATTTGTAATTTAGTGAAGGAGACTAGGGGATGTTTTCTTCCAAAG
3521 GGAATTTAAAATCAATTTTATGGTATTTTGAAAGTAAAATACTCCTTAACGTGTCAATATTTTTAAAATGTTATCTCGAA
3601 GTTTTCTATTGCTCAGGTATATAATCTAATAAAATTTTTTGTTTGCTCTAAGGTTATTTTTGCTATTCTCTATTTTGAAT
3681 TATGTTAAAATTTGTGTGCATTTTATGAAATGCCTTTTTTCTTATTTTGAAAGTGTAAAATTGGGCATCTCAGAGTAAAA
3761 TGTGGGATTATTAGCTACAAAGACTAGGCACATCGTGAAAGCTCAGTAACTAATTTTCTTGACTGAGTCCTATCCCAGAG
3841 TGTCACAGATTCAACAGAATTTTCCTGAAGGGTGATACACACCAAAATCTAGCTTGTGTGGATCTGAGACTATTGACTCA
3921 AAGATTCAAATCTACTTCGGAAGTGACTCCACGGTTTGAGTGAAAACTGAGGAAGGACTCATGCCTGTATATCACTAGAT
4001 ATCTTATTTCTCCATAATTTTAAGTGTTCATAATTTCTTCTTCTTTGATGGGTGTGCAACTGGGGCATGTTTGTACCAGC
4081 CAGCATGTGTTCTGCCCAACAGTGTGTCCGTGTGTGAGGTTAACTGATTCAGAACTCATTCTCTTGATAAACTATTTCTT
4161 GAAAGCATTTATTTTAAGTCTTTATTTCCTGCTGAAATGAAGTTTCATGCTGTCATGCCCATCTTATTTATTCTAGAAGA
4241 AAATTTTCATAGAAGAAAATGATTTATGGCCAAAGTTACAGAACATTCATCTTTTAGACTTAGCCTTAGAATATCATTGG
4321 AAATTACTTGGCTTGAATTTGGTTCGTTTTTATCTTTATGGATTATGTACCAGGGCTATTAATAATACTTAAACCCCTTA
4401 TTTTGCTATGGTGGTTAGATTTTTTTATTCCTTTTCAATTAGTGCTATTAATTATTACATGGTCGTATTCATGCTTATTA
4481 CAGATGAACTATTTTTAGTGCCAGTGTAAAGGATTAAGAATAACATTCAATTAGTTGGCTATTTCAGGCTTTATTGTACA
4561 TGGTAATGTTTCAGGGAGTGTGATTTGGTCTAGAATATATCCAGATCCTTGTAATTATGATATTGGGTTATGACAGGATT
4641 CTATTATTTTTAGCTATGAATGGTGCTTATTTTTCCCTATATTAGGAATGTTAATATTTGGATTATCAGAGTCCATGTTA
4721 TAAACAGAATTTACCTATGCAAGACAAATTCTAACTGTGCAACATTTTCATGAGAATTAAAAGTTGTGTGTTAAGGGGAA
4801 AACCCTCTGAATGTTTTTATGTGTAAGTGCCTAAAGAACCGTAGAAACAGTACATCAAAAGCTCTTATAAAAGAAAAACT
4881 GATTGAACATTAGCCAGAAACAAAATATGATTTACATTTTTTTTTTTGGTTGCTGGGACTGAATACCCTAAAAACTAAGA
4961 GATGTGAGTGGGGAAAATGTCTAATTGATAAGAAAGTTGATTTATATTATATTTACATGCATCTTCTAAGATTGCCTTTA
5041 CAGTAGCCAATCAGAACTTTAAAAAAAAAAAAGCTAACAACATAGATCCTATGTGTTGCCCTTAAGACTAAAATACTTTG
5121 CACACGTGATTGAATGGCTCACTTAAGTTGTTGAATTTCCTTATACATTTAAAGTGTACTTCCGTTAAGAATTATTCCAT
5201 TTTAAATGGGTAACTTTCAGCTTCCGAACTATTTTCCTAAACATTCCAGTTGTGTATTATAAAAGATCAAAATATCTCTA
5281 GGTGGTAGTACAATTTTCATTTATAACGTGGAAAAGTTAACTGTTAGGTTTAACATTAGTATTAGTGTTTTTGCAATTGC
5361 TCATAGAAAAGAACACTGAATAATGGTTTTCATACAATTTTTGTAAAACATTCTTCTCCCAGTTTGATTCCAAATGCTTT
5441 TCCCCAAATTGTCTAATATATCATAAGCTAGTGTTTCCTTGTATTTAATTTTTCCTTCCAACACAATATTTAGGAAAAAT
5521 ATGAATAACATTGTGAGTAGCGGGAGACAACACGAAAAAGAAACCTTTCATTGTTGTGGAGGGGTAGGTGTTATGTGATT
5601 GATGCCCTTCCTGGCGTTTGTTTTATCCTGTTATTTTCTCAAAAAAGAGCACGGCTTTTTCTTAAATACATTTAAATTCA
5681 GAATTGCTTGCAAAAGATTGGCCTGGATAGATAGACATCCTAGATTTAAGATAGTACCATCTTAAAAGTATGTTGAAAGG
5761 TAAAATAAATCATTTCAAAATACTTAACTTTCCTAATAAGGATGTTAGGTTTTCTTCTCTTTCATTAGCTGGCCATAAGT
5841 CAAGGTCCTTATAACACTAGGAAATTACCTTTTTTTACTTTCAAAATTGCATTATAGTGAATTACTGTTTACAAAATACA
5921 CATACTGTGAACAGATATAAGTTTCTGTCTTTTATAAGGTTTGTAGAATGAATGTTTTTTTAAAGTGAGTATTATATGTT
6001 AAATATTTTAAGTTTTTTATAAATACTAGTAACTGTTTACTAATTTTTGTTTGGTCAAATGCTTGTAAATGTAGCTGAAA
6081 GAAGATAGGGAGAAACTGCGGATCCCAAACTGTTCCCTTTTTCATTTCTTGAAATGTTACCACTACAGACATTTTTTTAA
6161 GGTGAATAAACAGTTGTGATGTGCTGTACCTAAAATCATGTTTAATCGTATAAGGAAACATTTCAATACACTTATACAGG
6241 AAGAAAACTATAGATGAAGTACATGTGTGTGATTCAGTCTGATTCACAGAATTCTGAGAGTAATATGGAATAAAACAACT
6321 CCACTTAGATGATAACTGAAGCATTTCCTGCCTTGTGAAAATTTGGATTTTAAATTGCTGTTAGAATGGGAAATTTGGAC
6401 ACTTTATATCATTGTATAATTTCAGAATTTAGTTTCTGTATCTTTTGGAAAACATGATTATAGCAAAAACATAGAAAATA
6481 ATCTATTACTAAAACACCATAAATGTAAAACTAGTATGCTTGGCTGTTAACTCTAAAGATGTTACTTATGTCTGTTTTTA
6561 AAACATGCATGTATTTAACAATTTTATCATAGTATTGTCATGGAAAAAATAAATATATTTTCTTACATCTTAAAAAAAAA
6641 AAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucgUGUCUGAACGACACUACAa 5'
             |:| ||  |:|||||||| 
Target 5' tgaATAAAC-AGTTGTGATGTg 3'
 6163 - 6183 158.00 -12.40
2 
miRNA  3' ucgugucuGAACGACACUAcaa 5'
                  |||||||||||   
Target 5' catgttttCTTGCTGTGATagg 3'
 680 - 701 130.00 -14.72
3 
miRNA  3' ucgugUCUGAACGACACUACAa 5'
               |||:|  |||| |||| 
Target 5' atctgAGATT--CTGTAATGTa 3'
 1487 - 1506 129.00 -8.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
907396 9 ClinVar
907395 10 ClinVar
907394 212 ClinVar
353604 262 ClinVar
907393 320 ClinVar
353603 324 ClinVar
353602 362 ClinVar
353601 368 ClinVar
353600 393 ClinVar
353599 394 ClinVar
906390 398 ClinVar
906389 415 ClinVar
906388 426 ClinVar
906387 443 ClinVar
906386 517 ClinVar
353598 546 ClinVar
353597 586 ClinVar
353596 648 ClinVar
905875 657 ClinVar
905874 933 ClinVar
353595 966 ClinVar
905873 972 ClinVar
353594 984 ClinVar
353593 987 ClinVar
353592 988 ClinVar
353591 1005 ClinVar
353590 1051 ClinVar
903997 1086 ClinVar
353589 1198 ClinVar
903996 1291 ClinVar
353588 1302 ClinVar
353587 1459 ClinVar
353586 1465 ClinVar
353585 1468 ClinVar
353584 1470 ClinVar
907332 1474 ClinVar
353583 1484 ClinVar
353582 1540 ClinVar
353581 1554 ClinVar
353580 1610 ClinVar
906326 1643 ClinVar
906325 1779 ClinVar
906324 1840 ClinVar
353579 1854 ClinVar
353578 1855 ClinVar
353577 1859 ClinVar
353576 1860 ClinVar
353575 1870 ClinVar
905817 1952 ClinVar
905816 1968 ClinVar
905815 1972 ClinVar
353574 2042 ClinVar
353573 2139 ClinVar
905814 2360 ClinVar
905813 2437 ClinVar
353572 2464 ClinVar
353571 2476 ClinVar
353570 2567 ClinVar
903929 2570 ClinVar
903928 2585 ClinVar
903927 2611 ClinVar
353569 2697 ClinVar
353568 2712 ClinVar
903926 2746 ClinVar
903925 2825 ClinVar
353567 2910 ClinVar
353566 2991 ClinVar
907269 3074 ClinVar
907268 3085 ClinVar
907267 3162 ClinVar
353565 3163 ClinVar
907266 3163 ClinVar
907265 3182 ClinVar
353563 3302 ClinVar
353564 3302 ClinVar
906270 3330 ClinVar
353562 3375 ClinVar
906269 3449 ClinVar
906268 3470 ClinVar
906267 3563 ClinVar
353561 3641 ClinVar
353560 3748 ClinVar
906266 3753 ClinVar
353559 3834 ClinVar
353558 3850 ClinVar
353557 3851 ClinVar
905756 3852 ClinVar
905755 4020 ClinVar
353556 4024 ClinVar
353555 4056 ClinVar
905754 4154 ClinVar
353554 4243 ClinVar
353553 4264 ClinVar
903859 4346 ClinVar
353552 4405 ClinVar
353551 4414 ClinVar
353550 4417 ClinVar
353549 4428 ClinVar
353548 4438 ClinVar
353547 4618 ClinVar
903858 4735 ClinVar
907204 4799 ClinVar
353546 4801 ClinVar
353545 4804 ClinVar
907203 4841 ClinVar
353544 4854 ClinVar
353542 4928 ClinVar
353543 4928 ClinVar
907202 5004 ClinVar
353541 5017 ClinVar
907201 5060 ClinVar
353540 5073 ClinVar
906211 5107 ClinVar
353539 5125 ClinVar
353538 5169 ClinVar
353537 5184 ClinVar
906210 5206 ClinVar
353536 5225 ClinVar
353535 5356 ClinVar
906209 5421 ClinVar
353534 5542 ClinVar
353533 5634 ClinVar
353532 5667 ClinVar
353531 5670 ClinVar
353530 5768 ClinVar
353529 5793 ClinVar
353528 5796 ClinVar
905686 5925 ClinVar
353527 5986 ClinVar
353526 6042 ClinVar
353525 6100 ClinVar
353524 6140 ClinVar
353523 6190 ClinVar
903785 6226 ClinVar
903784 6248 ClinVar
353522 6316 ClinVar
903783 6380 ClinVar
907139 6386 ClinVar
907138 6395 ClinVar
907137 6483 ClinVar
907136 6491 ClinVar
353521 6564 ClinVar
369474 6641 ClinVar
COSN30117115 10 COSMIC
COSN31502822 28 COSMIC
COSN30151071 31 COSMIC
COSN30181266 38 COSMIC
COSN26982411 63 COSMIC
COSN31543003 74 COSMIC
COSN31573604 78 COSMIC
COSN6296253 109 COSMIC
COSN30148773 139 COSMIC
COSN31599349 143 COSMIC
COSN30156287 148 COSMIC
COSN31610022 209 COSMIC
COSN31567590 246 COSMIC
COSN28201939 282 COSMIC
COSN17441159 308 COSMIC
COSN32058555 320 COSMIC
COSN32056700 321 COSMIC
COSN28647989 324 COSMIC
COSN31589068 352 COSMIC
COSN31519566 471 COSMIC
COSN31528008 527 COSMIC
COSN31540888 591 COSMIC
COSN8492757 596 COSMIC
COSN30538258 601 COSMIC
COSN24300880 664 COSMIC
COSN23485461 891 COSMIC
COSN4849730 1290 COSMIC
COSN2104939 1392 COSMIC
COSN20261104 1456 COSMIC
COSN32057713 1470 COSMIC
COSN2104938 1702 COSMIC
COSN9950646 1758 COSMIC
COSN8224867 1915 COSMIC
COSN32223680 1958 COSMIC
COSN23104519 2146 COSMIC
COSN16174061 2197 COSMIC
COSN32232057 2248 COSMIC
COSN24660344 2294 COSMIC
COSN19140907 2442 COSMIC
COSN31609744 2738 COSMIC
COSN28710810 2746 COSMIC
COSN31533507 2768 COSMIC
COSN31487500 2836 COSMIC
COSN25057034 2857 COSMIC
COSN25063722 2858 COSMIC
COSN26576491 2900 COSMIC
COSN17542725 3077 COSMIC
COSN28438442 3092 COSMIC
COSN31551614 3134 COSMIC
COSN8492756 3142 COSMIC
COSN8492755 3230 COSMIC
COSN31480941 3334 COSMIC
COSN29188261 3385 COSMIC
COSN24489805 3411 COSMIC
COSN31585866 3598 COSMIC
COSN31516751 3636 COSMIC
COSN31548646 3668 COSMIC
COSN31589073 3694 COSMIC
COSN32056469 3724 COSMIC
COSN28201291 3794 COSMIC
COSN31486268 3827 COSMIC
COSN32057712 3834 COSMIC
COSN31520136 3857 COSMIC
COSN16809816 3919 COSMIC
COSN8492754 3919 COSMIC
COSN28201950 3997 COSMIC
COSN19547500 4592 COSMIC
COSN20101146 4916 COSMIC
COSN27259798 4917 COSMIC
COSN24703672 4928 COSMIC
COSN16043414 5060 COSMIC
COSN20101144 5060 COSMIC
COSN27207290 5061 COSMIC
COSN22655468 5179 COSMIC
COSN31648600 5226 COSMIC
COSN19540995 5293 COSMIC
COSN28992918 5372 COSMIC
COSN29954405 5518 COSMIC
COSN32057212 5574 COSMIC
COSN15970746 5616 COSMIC
COSN32057711 5670 COSMIC
COSN19502863 5739 COSMIC
COSN31545058 5776 COSMIC
COSN31520419 5789 COSMIC
COSN31533496 5904 COSMIC
COSN31567588 5934 COSMIC
COSN31585018 5934 COSMIC
COSN16126796 5941 COSMIC
COSN19662069 6008 COSMIC
COSN26482245 6077 COSMIC
COSN31585022 6100 COSMIC
COSN9435270 6112 COSMIC
COSN24797086 6279 COSMIC
COSN9435269 6344 COSMIC
COSN28464160 6476 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs761993625 1 dbSNP
rs1445666709 3 dbSNP
rs751758745 4 dbSNP
rs1214840263 7 dbSNP
rs764112814 10 dbSNP
rs747346598 11 dbSNP
rs1017110423 13 dbSNP
rs1464734035 15 dbSNP
rs763025065 22 dbSNP
rs1161567306 23 dbSNP
rs1012469576 24 dbSNP
rs1362855264 31 dbSNP
rs1269854876 35 dbSNP
rs775583426 42 dbSNP
rs769910547 46 dbSNP
rs201449967 48 dbSNP
rs1437697948 52 dbSNP
rs990969498 58 dbSNP
rs1249775289 60 dbSNP
rs895277030 70 dbSNP
rs1301027021 71 dbSNP
rs561532221 82 dbSNP
rs1182420548 84 dbSNP
rs1484096819 92 dbSNP
rs1230639838 106 dbSNP
rs1269584832 107 dbSNP
rs1329385837 119 dbSNP
rs1056565587 122 dbSNP
rs1265682301 123 dbSNP
rs1191632996 131 dbSNP
rs543255047 140 dbSNP
rs1431181175 142 dbSNP
rs1004153561 163 dbSNP
rs575862798 165 dbSNP
rs1456905506 167 dbSNP
rs1354686639 168 dbSNP
rs902593150 171 dbSNP
rs1288178662 181 dbSNP
rs1238083916 190 dbSNP
rs1353564603 196 dbSNP
rs1323909923 197 dbSNP
rs1293408345 198 dbSNP
rs982341801 201 dbSNP
rs966334291 205 dbSNP
rs1289351757 208 dbSNP
rs1350790157 212 dbSNP
rs777885799 213 dbSNP
rs1227393187 219 dbSNP
rs1304233891 225 dbSNP
rs1322936486 227 dbSNP
rs1222242591 232 dbSNP
rs543535972 238 dbSNP
rs1487444801 240 dbSNP
rs1207109793 252 dbSNP
rs946711397 254 dbSNP
rs188257573 256 dbSNP
rs1180218304 257 dbSNP
rs1416081870 258 dbSNP
rs1424432792 261 dbSNP
rs763998777 262 dbSNP
rs893587501 262 dbSNP
rs577604105 272 dbSNP
rs1432154350 274 dbSNP
rs942602060 279 dbSNP
rs772267633 281 dbSNP
rs1017776903 285 dbSNP
rs552952862 293 dbSNP
rs986649666 300 dbSNP
rs1380746036 301 dbSNP
rs1228433113 304 dbSNP
rs1417291030 305 dbSNP
rs965343380 308 dbSNP
rs1362757411 313 dbSNP
rs534286563 315 dbSNP
rs201394596 317 dbSNP
rs149357204 320 dbSNP
rs918331216 321 dbSNP
rs929232267 323 dbSNP
rs3797156 324 dbSNP
rs1037070110 327 dbSNP
rs962329134 332 dbSNP
rs1186973818 335 dbSNP
rs1483689469 348 dbSNP
rs1488711231 348 dbSNP
rs1181417507 357 dbSNP
rs941366080 360 dbSNP
rs1005017 362 dbSNP
rs909929597 362 dbSNP
rs886060625 368 dbSNP
rs1428170878 379 dbSNP
rs1266182729 381 dbSNP
rs1247539523 387 dbSNP
rs779132960 393 dbSNP
rs115958115 394 dbSNP
rs138772371 398 dbSNP
rs1003696231 402 dbSNP
rs1437222457 419 dbSNP
rs1020566455 422 dbSNP
rs116625329 426 dbSNP
rs1021014288 438 dbSNP
rs184101529 439 dbSNP
rs1212641788 442 dbSNP
rs1011411405 443 dbSNP
rs1017327410 444 dbSNP
rs1209597446 447 dbSNP
rs1007751946 479 dbSNP
rs893778990 486 dbSNP
rs1039047142 491 dbSNP
rs546989449 496 dbSNP
rs943391630 500 dbSNP
rs528435493 505 dbSNP
rs1459324858 506 dbSNP
rs1366666774 516 dbSNP
rs889691332 517 dbSNP
rs1193340569 518 dbSNP
rs1426236740 523 dbSNP
rs1414699317 529 dbSNP
rs1174862634 532 dbSNP
rs1403311129 537 dbSNP
rs1478007853 537 dbSNP
rs1425569434 544 dbSNP
rs3822427 546 dbSNP
rs933809480 547 dbSNP
rs993407707 550 dbSNP
rs897711684 553 dbSNP
rs770527327 554 dbSNP
rs549697077 555 dbSNP
rs1218885844 561 dbSNP
rs1261449199 566 dbSNP
rs972469393 580 dbSNP
rs2561819 586 dbSNP
rs909668342 598 dbSNP
rs1445782984 600 dbSNP
rs193019517 601 dbSNP
rs778051771 605 dbSNP
rs756472947 609 dbSNP
rs544807588 610 dbSNP
rs116040046 613 dbSNP
rs1199881332 616 dbSNP
rs1320427314 630 dbSNP
rs886060624 648 dbSNP
rs1473361821 651 dbSNP
rs748590225 654 dbSNP
rs938116389 657 dbSNP
rs570512971 659 dbSNP
rs754726326 674 dbSNP
rs966864203 675 dbSNP
rs1021549861 678 dbSNP
rs541023079 696 dbSNP
rs1325501697 697 dbSNP
rs376245959 701 dbSNP
rs1388040791 706 dbSNP
rs1387998957 710 dbSNP
rs781748205 722 dbSNP
rs1352621686 728 dbSNP
rs774127787 728 dbSNP
rs755894698 730 dbSNP
rs1229236964 731 dbSNP
rs186664100 737 dbSNP
rs1348571157 759 dbSNP
rs1007554825 764 dbSNP
rs555282081 767 dbSNP
rs1451516408 772 dbSNP
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rs754981305 784 dbSNP
rs1378461782 790 dbSNP
rs751619532 812 dbSNP
rs543297073 813 dbSNP
rs1164457916 818 dbSNP
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rs1431492376 826 dbSNP
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rs896951008 836 dbSNP
rs1301130415 841 dbSNP
rs961890704 848 dbSNP
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rs1016159112 864 dbSNP
rs1252522664 866 dbSNP
rs1334178586 875 dbSNP
rs1247146621 879 dbSNP
rs909617548 887 dbSNP
rs1054829617 898 dbSNP
rs1006578693 900 dbSNP
rs937655824 906 dbSNP
rs1356346669 913 dbSNP
rs927623324 913 dbSNP
rs1483557344 916 dbSNP
rs1179805352 924 dbSNP
rs182349822 928 dbSNP
rs866664073 932 dbSNP
rs578231637 933 dbSNP
rs914200508 944 dbSNP
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rs1161548223 953 dbSNP
rs1042795 960 dbSNP
rs906590598 964 dbSNP
rs557553154 965 dbSNP
rs886060623 966 dbSNP
rs1235022976 968 dbSNP
rs1284872495 969 dbSNP
rs1339890366 971 dbSNP
rs1368133920 972 dbSNP
rs1300392076 979 dbSNP
rs558681338 984 dbSNP
rs886060622 987 dbSNP
rs3776425 988 dbSNP
rs1337113559 993 dbSNP
rs1201750002 1004 dbSNP
rs3776424 1005 dbSNP
rs1054024835 1009 dbSNP
rs1030753796 1016 dbSNP
rs538779717 1020 dbSNP
rs1409119562 1025 dbSNP
rs993544909 1026 dbSNP
rs897060838 1030 dbSNP
rs553146386 1033 dbSNP
rs1249878231 1045 dbSNP
rs1402701051 1049 dbSNP
rs189674684 1051 dbSNP
rs575907434 1052 dbSNP
rs1036931751 1057 dbSNP
rs1174517118 1063 dbSNP
rs1005328918 1067 dbSNP
rs922992004 1079 dbSNP
rs567657966 1086 dbSNP
rs1394490121 1087 dbSNP
rs1366627994 1096 dbSNP
rs1054764771 1097 dbSNP
rs1159345891 1106 dbSNP
rs145074110 1126 dbSNP
rs750168816 1135 dbSNP
rs1256271070 1141 dbSNP
rs1181771288 1148 dbSNP
rs1201297042 1149 dbSNP
rs1443332579 1152 dbSNP
rs1269474247 1166 dbSNP
rs1465296083 1176 dbSNP
rs141338789 1177 dbSNP
rs1201752254 1180 dbSNP
rs945087454 1181 dbSNP
rs1345308919 1182 dbSNP
rs914127908 1192 dbSNP
rs1479571361 1193 dbSNP
rs1161543442 1194 dbSNP
rs185611559 1195 dbSNP
rs1240276585 1197 dbSNP
rs775264074 1198 dbSNP
rs1002573883 1199 dbSNP
rs906559459 1205 dbSNP
rs1441456286 1207 dbSNP
rs1283032294 1208 dbSNP
rs958171933 1210 dbSNP
rs551957274 1218 dbSNP
rs1329183759 1226 dbSNP
rs1238279668 1233 dbSNP
rs1258931477 1250 dbSNP
rs1489409593 1252 dbSNP
rs182901603 1254 dbSNP
rs1267907314 1257 dbSNP
rs1375097786 1269 dbSNP
rs1184540621 1272 dbSNP
rs191968058 1274 dbSNP
rs1418621852 1277 dbSNP
rs1156989438 1282 dbSNP
rs1030454519 1289 dbSNP
rs1421559830 1290 dbSNP
rs767087396 1291 dbSNP
rs962097782 1292 dbSNP
rs1458866726 1293 dbSNP
rs1302929826 1294 dbSNP
rs1364041473 1295 dbSNP
rs1402742929 1295 dbSNP
rs1158484857 1297 dbSNP
rs886060621 1302 dbSNP
rs1370505297 1306 dbSNP
rs1005428673 1307 dbSNP
rs910756619 1309 dbSNP
rs1323500398 1310 dbSNP
rs570656304 1322 dbSNP
rs1246533298 1326 dbSNP
rs759420511 1332 dbSNP
rs888245578 1342 dbSNP
rs1054877698 1343 dbSNP
rs1002083883 1344 dbSNP
rs1050718642 1353 dbSNP
rs906259229 1375 dbSNP
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rs1484462067 1385 dbSNP
rs1252876916 1387 dbSNP
rs756920194 1391 dbSNP
rs1046177000 1392 dbSNP
rs1480424548 1395 dbSNP
rs932943032 1402 dbSNP
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rs540758119 1422 dbSNP
rs1424917685 1431 dbSNP
rs892157715 1432 dbSNP
rs1383813702 1441 dbSNP
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rs1256327069 1453 dbSNP
rs940460046 1457 dbSNP
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rs1488975450 1467 dbSNP
rs1281602285 1468 dbSNP
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rs1045668570 1469 dbSNP
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rs13156520 1470 dbSNP
rs1202629163 1471 dbSNP
rs1257861258 1472 dbSNP
rs1285688747 1473 dbSNP
rs1483598105 1473 dbSNP
rs567565130 1474 dbSNP
rs111879831 1477 dbSNP
rs1354628355 1477 dbSNP
rs150617726 1481 dbSNP
rs368867968 1481 dbSNP
rs1451861954 1484 dbSNP
rs75368466 1484 dbSNP
rs1419165623 1486 dbSNP
rs1409025144 1490 dbSNP
rs1167818134 1492 dbSNP
rs1360418980 1493 dbSNP
rs557727961 1497 dbSNP
rs972187313 1499 dbSNP
rs1335481577 1510 dbSNP
rs1403904442 1515 dbSNP
rs1024972854 1520 dbSNP
rs545983404 1529 dbSNP
rs1360956986 1532 dbSNP
rs1016226786 1537 dbSNP
rs1032430244 1538 dbSNP
rs547319835 1540 dbSNP
rs952628669 1547 dbSNP
rs1203173516 1552 dbSNP
rs1428604 1554 dbSNP
rs1466638438 1567 dbSNP
rs1475071121 1568 dbSNP
rs1424857337 1569 dbSNP
rs1193923537 1576 dbSNP
rs1478598591 1582 dbSNP
rs1002434928 1585 dbSNP
rs1051104115 1598 dbSNP
rs1239807072 1607 dbSNP
rs2731964 1610 dbSNP
rs1426905400 1613 dbSNP
rs1042798 1614 dbSNP
rs1042799 1615 dbSNP
rs1025123056 1621 dbSNP
rs1175094598 1622 dbSNP
rs769159601 1631 dbSNP
rs1009323722 1643 dbSNP
rs747486468 1652 dbSNP
rs1318847917 1654 dbSNP
rs1344505829 1657 dbSNP
rs1428444381 1658 dbSNP
rs901505287 1663 dbSNP
rs1036062050 1675 dbSNP
rs1452072459 1675 dbSNP
rs1053438930 1701 dbSNP
rs1223060328 1711 dbSNP
rs1281466922 1717 dbSNP
rs940344375 1719 dbSNP
rs936359625 1724 dbSNP
rs1445762786 1737 dbSNP
rs889352175 1737 dbSNP
rs766866057 1739 dbSNP
rs1211796775 1740 dbSNP
rs760950378 1741 dbSNP
rs534795497 1742 dbSNP
rs933455736 1743 dbSNP
rs773615697 1744 dbSNP
rs796244144 1747 dbSNP
rs1158620218 1749 dbSNP
rs1407238044 1753 dbSNP
rs1398872766 1772 dbSNP
rs984574111 1773 dbSNP
rs533737306 1779 dbSNP
rs1404592372 1781 dbSNP
rs1360162328 1788 dbSNP
rs1352525703 1790 dbSNP
rs1443082021 1794 dbSNP
rs1269629612 1796 dbSNP
rs1349169045 1799 dbSNP
rs182437124 1819 dbSNP
rs1292988582 1822 dbSNP
rs1359126887 1824 dbSNP
rs972524015 1826 dbSNP
rs1220684136 1827 dbSNP
rs1266396832 1831 dbSNP
rs940778655 1833 dbSNP
rs190209875 1840 dbSNP
rs1231748186 1842 dbSNP
rs758622370 1847 dbSNP
rs1324452861 1848 dbSNP
rs1461437105 1851 dbSNP
rs570364419 1852 dbSNP
rs886060619 1854 dbSNP
rs886060618 1855 dbSNP
rs1033530675 1858 dbSNP
rs772252918 1859 dbSNP
rs748353397 1860 dbSNP
rs1410681624 1863 dbSNP
rs956749900 1866 dbSNP
rs60287085 1870 dbSNP
rs1009847157 1871 dbSNP
rs1382670865 1875 dbSNP
rs892216593 1887 dbSNP
rs1244312562 1889 dbSNP
rs889264989 1890 dbSNP
rs1341039785 1894 dbSNP
rs1195957658 1895 dbSNP
rs1271702205 1909 dbSNP
rs1435525764 1911 dbSNP
rs764095689 1925 dbSNP
rs1243725069 1938 dbSNP
rs1000519192 1950 dbSNP
rs558503590 1952 dbSNP
rs1374526325 1954 dbSNP
rs997758887 1955 dbSNP
rs138452115 1956 dbSNP
rs1471027440 1960 dbSNP
rs571151710 1961 dbSNP
rs759458908 1968 dbSNP
rs1451007859 1969 dbSNP
rs1300280367 1970 dbSNP
rs186434048 1971 dbSNP
rs1227741988 1972 dbSNP
rs1036529684 1978 dbSNP
rs1337016945 1980 dbSNP
rs774626456 1982 dbSNP
rs937148133 1985 dbSNP
rs1220089651 1986 dbSNP
rs1201639320 1989 dbSNP
rs940887279 1999 dbSNP
rs528976508 2000 dbSNP
rs1428945593 2002 dbSNP
rs1192178775 2010 dbSNP
rs1049149310 2014 dbSNP
rs1481541175 2019 dbSNP
rs1301340818 2021 dbSNP
rs867000960 2022 dbSNP
rs1468719146 2023 dbSNP
rs561412516 2024 dbSNP
rs1440733249 2025 dbSNP
rs1378325505 2037 dbSNP
rs927321491 2040 dbSNP
rs551424232 2042 dbSNP
rs1324391498 2060 dbSNP
rs1440433220 2061 dbSNP
rs1354371131 2067 dbSNP
rs1322163840 2069 dbSNP
rs1221121560 2071 dbSNP
rs988702753 2079 dbSNP
rs1204406241 2080 dbSNP
rs1486148378 2080 dbSNP
rs549375204 2081 dbSNP
rs531162642 2085 dbSNP
rs1490904887 2087 dbSNP
rs970660528 2087 dbSNP
rs925331003 2090 dbSNP
rs1161349900 2097 dbSNP
rs1364938252 2098 dbSNP
rs917863693 2098 dbSNP
rs1453666685 2106 dbSNP
rs1157194603 2108 dbSNP
rs1367795983 2111 dbSNP
rs1406425840 2116 dbSNP
rs979920823 2121 dbSNP
rs953521789 2135 dbSNP
rs1308516792 2139 dbSNP
rs141563662 2139 dbSNP
rs997644541 2144 dbSNP
rs966216047 2145 dbSNP
rs1015154265 2146 dbSNP
rs1361277408 2167 dbSNP
rs987971627 2171 dbSNP
rs1222906740 2172 dbSNP
rs1005160710 2174 dbSNP
rs564452811 2176 dbSNP
rs1489917073 2182 dbSNP
rs1179089748 2186 dbSNP
rs887441201 2191 dbSNP
rs765868545 2192 dbSNP
rs1180238473 2194 dbSNP
rs1387596249 2203 dbSNP
rs1425743060 2209 dbSNP
rs1163332415 2224 dbSNP
rs1364651889 2233 dbSNP
rs1048755350 2234 dbSNP
rs1032065943 2236 dbSNP
rs1000635339 2238 dbSNP
rs1299400714 2240 dbSNP
rs545771896 2248 dbSNP
rs1373359704 2249 dbSNP
rs1390777511 2251 dbSNP
rs1178926594 2255 dbSNP
rs1028650851 2256 dbSNP
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rs1290752544 2274 dbSNP
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rs1357557123 2278 dbSNP
rs1206818806 2280 dbSNP
rs1001618372 2304 dbSNP
rs1480373126 2308 dbSNP
rs762499948 2311 dbSNP
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rs772821407 2315 dbSNP
rs1445763812 2316 dbSNP
rs1233705533 2322 dbSNP
rs887966775 2325 dbSNP
rs1354555713 2334 dbSNP
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rs937436636 2348 dbSNP
rs1172030770 2350 dbSNP
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rs1461084870 2360 dbSNP
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rs1408294875 2377 dbSNP
rs1453198087 2396 dbSNP
rs1314125340 2398 dbSNP
rs1045727438 2400 dbSNP
rs1376647029 2400 dbSNP
rs1296624050 2408 dbSNP
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rs1303796722 2442 dbSNP
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rs540513218 2991 dbSNP
rs980792156 3000 dbSNP
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rs969678109 3019 dbSNP
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rs1264968049 3220 dbSNP
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rs975821681 3280 dbSNP
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rs983063080 3300 dbSNP
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rs560364899 3314 dbSNP
rs980376451 3319 dbSNP
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rs1312337812 3325 dbSNP
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rs1306412749 3350 dbSNP
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rs757448384 3389 dbSNP
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rs1302041425 3410 dbSNP
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rs780971288 3571 dbSNP
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rs1247897012 3612 dbSNP
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rs796517933 3641 dbSNP
rs201550012 3643 dbSNP
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rs996661385 3683 dbSNP
rs1239761976 3687 dbSNP
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rs1004157228 3716 dbSNP
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rs1414775600 3751 dbSNP
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rs1356792926 3774 dbSNP
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rs1285651615 3791 dbSNP
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rs572653499 3795 dbSNP
rs758363017 3797 dbSNP
rs1287055197 3820 dbSNP
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rs34130318 3834 dbSNP
rs370245489 3847 dbSNP
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rs78474283 3851 dbSNP
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rs1212647617 3866 dbSNP
rs1484400949 3867 dbSNP
rs924898043 3883 dbSNP
rs978796656 3887 dbSNP
rs187911883 3891 dbSNP
rs1161549902 3893 dbSNP
rs564678968 3901 dbSNP
rs886293348 3903 dbSNP
rs1466178577 3910 dbSNP
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rs1352773247 3928 dbSNP
rs1277511936 3934 dbSNP
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rs1238018396 3936 dbSNP
rs1446766192 3938 dbSNP
rs1355901735 3941 dbSNP
rs1295338594 3943 dbSNP
rs761465550 3945 dbSNP
rs776215326 3949 dbSNP
rs1044451246 3952 dbSNP
rs764510269 3953 dbSNP
rs537529670 3958 dbSNP
rs112983622 3960 dbSNP
rs1319085004 3961 dbSNP
rs956152384 3977 dbSNP
rs1185738579 3980 dbSNP
rs570491104 3981 dbSNP
rs982689518 3984 dbSNP
rs1193035499 3987 dbSNP
rs551905367 3994 dbSNP
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rs1173547107 4010 dbSNP
rs968785250 4020 dbSNP
rs140501581 4024 dbSNP
rs1189536762 4036 dbSNP
rs975809279 4044 dbSNP
rs1331851591 4045 dbSNP
rs539548553 4052 dbSNP
rs73077449 4056 dbSNP
rs899177554 4060 dbSNP
rs1022990753 4067 dbSNP
rs1019255941 4078 dbSNP
rs1275255587 4081 dbSNP
rs1012975634 4083 dbSNP
rs1008772535 4084 dbSNP
rs886239393 4110 dbSNP
rs1057264444 4118 dbSNP
rs1215998668 4124 dbSNP
rs1026097852 4128 dbSNP
rs548502269 4130 dbSNP
rs1282036092 4133 dbSNP
rs1261056673 4134 dbSNP
rs1204543029 4140 dbSNP
rs1335235016 4141 dbSNP
rs1435451285 4145 dbSNP
rs1274820342 4151 dbSNP
rs529945644 4153 dbSNP
rs73077448 4154 dbSNP
rs1477280293 4158 dbSNP
rs1355090555 4161 dbSNP
rs1362070421 4171 dbSNP
rs1270804238 4177 dbSNP
rs1297068412 4190 dbSNP
rs1382093304 4207 dbSNP
rs776106608 4210 dbSNP
rs903411555 4212 dbSNP
rs1230797791 4221 dbSNP
rs1311103622 4227 dbSNP
rs1324812982 4238 dbSNP
rs73749255 4243 dbSNP
rs746397347 4249 dbSNP
rs920954790 4255 dbSNP
rs567027526 4261 dbSNP
rs886060615 4264 dbSNP
rs1180915482 4266 dbSNP
rs774427939 4272 dbSNP
rs531736082 4279 dbSNP
rs1439954673 4297 dbSNP
rs1163251416 4301 dbSNP
rs895485038 4305 dbSNP
rs1459508218 4309 dbSNP
rs975158078 4313 dbSNP
rs755448270 4314 dbSNP
rs1293534227 4317 dbSNP
rs1186790466 4324 dbSNP
rs564558255 4332 dbSNP
rs1333155011 4335 dbSNP
rs184642499 4346 dbSNP
rs572394300 4351 dbSNP
rs924895405 4352 dbSNP
rs1305208118 4353 dbSNP
rs1323730997 4365 dbSNP
rs1245620439 4366 dbSNP
rs1264885147 4372 dbSNP
rs1192299881 4404 dbSNP
rs191397058 4405 dbSNP
rs542094343 4414 dbSNP
rs921321787 4416 dbSNP
rs886060614 4417 dbSNP
rs1177155090 4421 dbSNP
rs974043765 4427 dbSNP
rs10056657 4428 dbSNP
rs1273950674 4430 dbSNP
rs369779516 4436 dbSNP
rs886060613 4438 dbSNP
rs1022959608 4441 dbSNP
rs1459381718 4444 dbSNP
rs1172788858 4451 dbSNP
rs1012944694 4455 dbSNP
rs76275181 4459 dbSNP
rs1296172974 4461 dbSNP
rs1035757066 4462 dbSNP
rs556352612 4465 dbSNP
rs1312140815 4467 dbSNP
rs903383107 4481 dbSNP
rs1259343604 4482 dbSNP
rs749520316 4484 dbSNP
rs947702835 4492 dbSNP
rs899493173 4498 dbSNP
rs538404675 4504 dbSNP
rs1039353472 4505 dbSNP
rs1182124348 4528 dbSNP
rs943686232 4534 dbSNP
rs1355536996 4535 dbSNP
rs1170701703 4541 dbSNP
rs1424257288 4552 dbSNP
rs1464987487 4555 dbSNP
rs1168090444 4556 dbSNP
rs1360643499 4558 dbSNP
rs1466333705 4570 dbSNP
rs1302539649 4573 dbSNP
rs1026212623 4591 dbSNP
rs912290831 4592 dbSNP
rs1278859119 4593 dbSNP
rs1340473650 4594 dbSNP
rs1213279996 4597 dbSNP
rs1304007240 4601 dbSNP
rs994617259 4605 dbSNP
rs1454632772 4611 dbSNP
rs576106981 4618 dbSNP
rs1484448881 4620 dbSNP
rs1023096464 4623 dbSNP
rs1263222051 4631 dbSNP
rs919791461 4638 dbSNP
rs1184751152 4640 dbSNP
rs1467858386 4643 dbSNP
rs1012674708 4663 dbSNP
rs1433618496 4674 dbSNP
rs113629002 4676 dbSNP
rs1233245301 4679 dbSNP
rs895587056 4685 dbSNP
rs1393512786 4696 dbSNP
rs370856053 4705 dbSNP
rs761242769 4706 dbSNP
rs1360023758 4717 dbSNP
rs1428692602 4721 dbSNP
rs1436313947 4722 dbSNP
rs1272325340 4729 dbSNP
rs201856141 4735 dbSNP
rs969308147 4737 dbSNP
rs1056813184 4738 dbSNP
rs377641524 4751 dbSNP
rs1301634070 4760 dbSNP
rs934337053 4762 dbSNP
rs1286247814 4769 dbSNP
rs916504283 4772 dbSNP
rs991427128 4775 dbSNP
rs903420422 4783 dbSNP
rs1235069879 4784 dbSNP
rs1350203201 4788 dbSNP
rs960045457 4796 dbSNP
rs1392993911 4799 dbSNP
rs555849365 4801 dbSNP
rs55917124 4804 dbSNP
rs1379901272 4813 dbSNP
rs1399096254 4815 dbSNP
rs921446474 4821 dbSNP
rs1040160293 4823 dbSNP
rs1436332399 4827 dbSNP
rs944129245 4827 dbSNP
rs558613121 4831 dbSNP
rs754738153 4840 dbSNP
rs1307069696 4841 dbSNP
rs1434777644 4845 dbSNP
rs951413415 4849 dbSNP
rs35853268 4854 dbSNP
rs1291340198 4856 dbSNP
rs1171681748 4860 dbSNP
rs973296820 4865 dbSNP
rs1007868498 4868 dbSNP
rs963508105 4878 dbSNP
rs1179015299 4884 dbSNP
rs1408378799 4887 dbSNP
rs1178760679 4907 dbSNP
rs1232522484 4910 dbSNP
rs1022789070 4912 dbSNP
rs1404812210 4928 dbSNP
rs764162435 4928 dbSNP
rs886060611 4928 dbSNP
rs886060612 4928 dbSNP
rs199512272 4929 dbSNP
rs1251326811 4932 dbSNP
rs1211933461 4935 dbSNP
rs1486690604 4936 dbSNP
rs1278285813 4941 dbSNP
rs186565945 4944 dbSNP
rs1318074020 4949 dbSNP
rs779848824 4962 dbSNP
rs1285559543 4967 dbSNP
rs1379321546 4971 dbSNP
rs1222397401 4981 dbSNP
rs772471379 4983 dbSNP
rs1287309997 4985 dbSNP
rs752040002 4990 dbSNP
rs766684854 4995 dbSNP
rs758275090 5004 dbSNP
rs1310566791 5009 dbSNP
rs1247096101 5015 dbSNP
rs886060610 5017 dbSNP
rs1474954700 5020 dbSNP
rs1465448510 5021 dbSNP
rs919745242 5022 dbSNP
rs1426418239 5023 dbSNP
rs762223198 5029 dbSNP
rs1478406181 5030 dbSNP
rs1161258436 5036 dbSNP
rs1398722882 5037 dbSNP
rs548538764 5041 dbSNP
rs1411042575 5054 dbSNP
rs183333459 5060 dbSNP
rs1394833057 5061 dbSNP
rs959797125 5061 dbSNP
rs1335840468 5067 dbSNP
rs1359372777 5072 dbSNP
rs1413632180 5073 dbSNP
rs34579169 5073 dbSNP
rs947910934 5085 dbSNP
rs1269493782 5086 dbSNP
rs1337265645 5091 dbSNP
rs1476318857 5093 dbSNP
rs1279688622 5100 dbSNP
rs1485429746 5104 dbSNP
rs1035465616 5107 dbSNP
rs1265376097 5116 dbSNP
rs1488639505 5123 dbSNP
rs147202739 5125 dbSNP
rs1371830299 5126 dbSNP
rs1486260926 5140 dbSNP
rs902871255 5143 dbSNP
rs1479245147 5147 dbSNP
rs1043293384 5150 dbSNP
rs3822426 5169 dbSNP
rs1433665253 5174 dbSNP
rs960014742 5174 dbSNP
rs1214351723 5176 dbSNP
rs928691941 5178 dbSNP
rs1361951707 5183 dbSNP
rs886060609 5184 dbSNP
rs1317626421 5191 dbSNP
rs1324614420 5193 dbSNP
rs1235150723 5196 dbSNP
rs977901466 5197 dbSNP
rs1347465930 5206 dbSNP
rs900119099 5218 dbSNP
rs1039871413 5221 dbSNP
rs1288398584 5222 dbSNP
rs58755763 5225 dbSNP
rs1204623429 5226 dbSNP
rs1011727076 5233 dbSNP
rs1453771495 5239 dbSNP
rs1200049713 5254 dbSNP
rs1252721701 5270 dbSNP
rs753510025 5272 dbSNP
rs1357006525 5276 dbSNP
rs768933877 5279 dbSNP
rs1171422099 5289 dbSNP
rs912634693 5291 dbSNP
rs1453929025 5293 dbSNP
rs1394923495 5296 dbSNP
rs1047147808 5297 dbSNP
rs534046332 5307 dbSNP
rs929939520 5308 dbSNP
rs890781619 5316 dbSNP
rs1326459403 5336 dbSNP
rs1370040685 5339 dbSNP
rs1438424235 5345 dbSNP
rs7713531 5356 dbSNP
rs867067613 5358 dbSNP
rs1354596541 5363 dbSNP
rs546275142 5371 dbSNP
rs1359119406 5376 dbSNP
rs898203099 5385 dbSNP
rs1387559161 5386 dbSNP
rs1180894187 5388 dbSNP
rs1239624987 5392 dbSNP
rs1419243111 5393 dbSNP
rs1180498374 5403 dbSNP
rs1361600189 5403 dbSNP
rs1458973652 5405 dbSNP
rs527711751 5418 dbSNP
rs1393635624 5421 dbSNP
rs1459679719 5437 dbSNP
rs1463176332 5441 dbSNP
rs1333047662 5442 dbSNP
rs1374353844 5458 dbSNP
rs1390998206 5466 dbSNP
rs1415919763 5467 dbSNP
rs1305097925 5473 dbSNP
rs1342395336 5476 dbSNP
rs560097040 5477 dbSNP
rs1429186064 5480 dbSNP
rs916441045 5481 dbSNP
rs1056309797 5485 dbSNP
rs541785486 5498 dbSNP
rs1253975827 5506 dbSNP
rs574812537 5507 dbSNP
rs923863600 5515 dbSNP
rs556389970 5528 dbSNP
rs1247962005 5537 dbSNP
rs369128015 5541 dbSNP
rs886060608 5542 dbSNP
rs1187965466 5545 dbSNP
rs1035416865 5553 dbSNP
rs998610352 5554 dbSNP
rs1172592882 5568 dbSNP
rs1263297168 5575 dbSNP
rs1354938460 5576 dbSNP
rs1461278774 5583 dbSNP
rs1243695961 5584 dbSNP
rs912532145 5585 dbSNP
rs964189582 5594 dbSNP
rs1307495949 5597 dbSNP
rs1297113964 5615 dbSNP
rs375363202 5616 dbSNP
rs149932478 5634 dbSNP
rs1011698764 5652 dbSNP
rs1220963707 5653 dbSNP
rs955614984 5664 dbSNP
rs886060607 5667 dbSNP
rs3822425 5670 dbSNP
rs558399671 5681 dbSNP
rs1249265221 5692 dbSNP
rs768004410 5699 dbSNP
rs1256142413 5708 dbSNP
rs1008367730 5712 dbSNP
rs1016623024 5714 dbSNP
rs191019863 5731 dbSNP
rs1011992574 5733 dbSNP
rs566540398 5734 dbSNP
rs760051833 5736 dbSNP
rs554626836 5739 dbSNP
rs536207682 5741 dbSNP
rs1312388661 5744 dbSNP
rs886060606 5768 dbSNP
rs1373753886 5771 dbSNP
rs1401907371 5772 dbSNP
rs939185069 5775 dbSNP
rs1361786536 5787 dbSNP
rs556240742 5793 dbSNP
rs886060605 5796 dbSNP
rs1168463971 5808 dbSNP
rs948076814 5809 dbSNP
rs569182863 5822 dbSNP
rs991831481 5834 dbSNP
rs1042709820 5849 dbSNP
rs946055402 5855 dbSNP
rs369004224 5861 dbSNP
rs550842280 5867 dbSNP
rs1345193183 5868 dbSNP
rs1396186807 5873 dbSNP
rs914580137 5875 dbSNP
rs1242637588 5880 dbSNP
rs1485472636 5887 dbSNP
rs1184588978 5891 dbSNP
rs1269157581 5897 dbSNP
rs990230466 5901 dbSNP
rs1173308466 5902 dbSNP
rs942793434 5907 dbSNP
rs571064663 5925 dbSNP
rs538503092 5937 dbSNP
rs1345141070 5938 dbSNP
rs986926057 5941 dbSNP
rs551184868 5945 dbSNP
rs1372241170 5952 dbSNP
rs1252517135 5953 dbSNP
rs1440615466 5954 dbSNP
rs1302323817 5955 dbSNP
rs1368250857 5956 dbSNP
rs1225509733 5958 dbSNP
rs1224980606 5968 dbSNP
rs1284294329 5969 dbSNP
rs1316305202 5970 dbSNP
rs1213609992 5975 dbSNP
rs376744831 5978 dbSNP
rs1192700634 5982 dbSNP
rs1468799134 5982 dbSNP
rs928463083 5983 dbSNP
rs977288362 5984 dbSNP
rs886060604 5986 dbSNP
rs1021409519 5987 dbSNP
rs1407401859 5993 dbSNP
rs1025884057 5995 dbSNP
rs34965361 6010 dbSNP
rs973420869 6010 dbSNP
rs962404965 6012 dbSNP
rs989820767 6018 dbSNP
rs1398867977 6019 dbSNP
rs1324235094 6021 dbSNP
rs1011876276 6024 dbSNP
rs1443877966 6035 dbSNP
rs1279742342 6041 dbSNP
rs542021288 6042 dbSNP
rs964062901 6056 dbSNP
rs1018504658 6065 dbSNP
rs1008903618 6071 dbSNP
rs1295054228 6080 dbSNP
rs1335326523 6081 dbSNP
rs1376206858 6082 dbSNP
rs1175999750 6093 dbSNP
rs188682396 6100 dbSNP
rs867374278 6101 dbSNP
rs1270994934 6102 dbSNP
rs1439306767 6103 dbSNP
rs1377374174 6106 dbSNP
rs35194348 6107 dbSNP
rs1025764026 6110 dbSNP
rs994317486 6113 dbSNP
rs1190077461 6118 dbSNP
rs73077446 6140 dbSNP
rs1475139262 6141 dbSNP
rs1421293397 6150 dbSNP
rs1038871616 6153 dbSNP
rs1042286798 6158 dbSNP
rs946662699 6159 dbSNP
rs1329200321 6162 dbSNP
rs893134196 6164 dbSNP
rs1482442393 6171 dbSNP
rs1314124448 6176 dbSNP
rs1356041515 6181 dbSNP
rs1232645107 6183 dbSNP
rs948053630 6186 dbSNP
rs1046224 6190 dbSNP
rs1055684180 6198 dbSNP
rs942678964 6199 dbSNP
rs911284490 6207 dbSNP
rs938573682 6208 dbSNP
rs769954591 6210 dbSNP
rs1274222770 6226 dbSNP
rs113362017 6233 dbSNP
rs1375275652 6234 dbSNP
rs748385075 6235 dbSNP
rs1239470445 6238 dbSNP
rs1418374907 6240 dbSNP
rs1427373023 6244 dbSNP
rs560182899 6248 dbSNP
rs1286672684 6250 dbSNP
rs1409443820 6251 dbSNP
rs1356104765 6254 dbSNP
rs1311061846 6262 dbSNP
rs973001410 6263 dbSNP
rs1269327950 6265 dbSNP
rs945892451 6266 dbSNP
rs1281285500 6294 dbSNP
rs1347324241 6296 dbSNP
rs548178333 6305 dbSNP
rs1208815837 6306 dbSNP
rs115572283 6316 dbSNP
rs1448030453 6317 dbSNP
rs1159703556 6319 dbSNP
rs562894485 6320 dbSNP
rs1192954208 6334 dbSNP
rs990324204 6336 dbSNP
rs1240755819 6355 dbSNP
rs1455837222 6368 dbSNP
rs1175187548 6373 dbSNP
rs963712767 6380 dbSNP
rs1433564191 6383 dbSNP
rs141407987 6395 dbSNP
rs1387077952 6397 dbSNP
rs1179491151 6404 dbSNP
rs1472069989 6406 dbSNP
rs1317522646 6408 dbSNP
rs1324522711 6410 dbSNP
rs1442816237 6440 dbSNP
rs959045828 6442 dbSNP
rs577400565 6453 dbSNP
rs1034718023 6471 dbSNP
rs771210595 6483 dbSNP
rs1257550537 6485 dbSNP
rs565492489 6497 dbSNP
rs1003726332 6498 dbSNP
rs986520492 6504 dbSNP
rs1440243835 6509 dbSNP
rs1021238040 6518 dbSNP
rs1277808089 6530 dbSNP
rs745807147 6531 dbSNP
rs1196170006 6532 dbSNP
rs778769582 6542 dbSNP
rs756764764 6547 dbSNP
rs1157987609 6549 dbSNP
rs1386357772 6560 dbSNP
rs566612340 6564 dbSNP
rs572978278 6565 dbSNP
rs1394062921 6571 dbSNP
rs1352491312 6577 dbSNP
rs994266586 6579 dbSNP
rs1336488917 6586 dbSNP
rs1006865899 6593 dbSNP
rs898683932 6598 dbSNP
rs1337509545 6603 dbSNP
rs1214732728 6609 dbSNP
rs1051187224 6610 dbSNP
rs1016978489 6617 dbSNP
rs1410538133 6622 dbSNP
rs1295393638 6623 dbSNP
rs1445886069 6626 dbSNP
rs1252219221 6632 dbSNP
rs57386567 6641 dbSNP
rs1319552595 6647 dbSNP
rs1012755349 6654 dbSNP
rs1037570036 6659 dbSNP
rs1165517866 6662 dbSNP
rs941552690 6664 dbSNP
rs1456186142 6665 dbSNP
rs138828902 6666 dbSNP
rs910109452 6678 dbSNP
rs991059036 6685 dbSNP
rs1390904333 6688 dbSNP
rs1306207555 6699 dbSNP
rs959011671 6704 dbSNP
rs895268095 6707 dbSNP
rs1386842079 6708 dbSNP
rs1234484470 6709 dbSNP
rs1056866725 6716 dbSNP
rs1320358872 6717 dbSNP
rs1003571375 6722 dbSNP
rs907107564 6725 dbSNP
rs1041671375 6726 dbSNP
rs966827515 6727 dbSNP
rs1194762176 6729 dbSNP
rs1428605 6731 dbSNP
rs1486351988 6737 dbSNP
rs1188640348 6738 dbSNP
rs945839857 6738 dbSNP
rs1421839158 6743 dbSNP
rs199671883 6745 dbSNP
rs1172191341 6746 dbSNP
rs549239159 6753 dbSNP
rs914393827 6758 dbSNP
rs529285350 6762 dbSNP
rs1017516076 6763 dbSNP
rs1007522099 6766 dbSNP
rs72742524 6769 dbSNP
rs1377539193 6770 dbSNP
rs1384291417 6779 dbSNP
rs910996515 6791 dbSNP
rs183639435 6792 dbSNP
rs1207842518 6793 dbSNP
rs1227271605 6798 dbSNP
rs1335294359 6799 dbSNP
rs955053764 6801 dbSNP
rs1349503906 6807 dbSNP
rs1210890203 6810 dbSNP
rs1275271568 6819 dbSNP
rs918813579 6821 dbSNP
rs1188084558 6823 dbSNP
rs972959577 6834 dbSNP
rs190606765 6837 dbSNP
rs112733645 6846 dbSNP
rs1397117744 6855 dbSNP
rs752399140 6871 dbSNP
rs1012457488 6888 dbSNP
rs113163678 6890 dbSNP
rs59046986 6892 dbSNP
rs534461602 6893 dbSNP
rs1289936688 6896 dbSNP
rs181829232 6900 dbSNP
rs1361766268 6906 dbSNP
rs1003517365 6908 dbSNP
rs1433340600 6912 dbSNP
rs928243512 6912 dbSNP
rs867786668 6915 dbSNP
rs1397227994 6923 dbSNP
rs1277244269 6927 dbSNP
rs1041617719 6928 dbSNP
rs145694161 6928 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucgugucuGAACGACACUAcaa 5'
                  |||||||||||   
Target 5' ----uuuuCUUGCUGUGAUag- 3'
 		1 - 17
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000263409.4 | 3UTR | UUUUCUUGCUGUGAUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla 0.726 2.5e-3 0.548 2.6e-2 13 Click to see details
GSE38226 Liver fibrosis 0.479 1.4e-2 0.575 3.2e-3 21 Click to see details
GSE28544 Breast cancer 0.245 1.2e-1 0.330 5.8e-2 24 Click to see details
GSE21687 Ependynoma primary tumors 0.13 1.5e-1 0.153 1.1e-1 64 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.057 3.9e-1 0.230 1.3e-1 25 Click to see details
GSE26953 Aortic valvular endothelial cells -0.053 4.0e-1 -0.063 3.8e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.048 4.2e-1 -0.171 2.4e-1 20 Click to see details
GSE19350 CNS germ cell tumors -0.058 4.3e-1 0.260 2.1e-1 12 Click to see details
GSE17498 Multiple myeloma 0.022 4.5e-1 0.090 2.9e-1 40 Click to see details
GSE32688 Pancreatic cancer 0.009 4.8e-1 0.055 3.8e-1 32 Click to see details
GSE42095 Differentiated embryonic stem cells 0.008 4.9e-1 0.003 4.9e-1 23 Click to see details
GSE42095 Differentiated embryonic stem cells 0.008 4.9e-1 0.003 4.9e-1 23 Click to see details
GSE42095 Differentiated embryonic stem cells 0.008 4.9e-1 0.003 4.9e-1 23 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
STAD 0.871 0.03 0.900 0.02 5 Click to see details
BRCA -0.974 0.07 -1.000 0.5 3 Click to see details
THCA 0.256 0.09 0.159 0.21 29 Click to see details
KIRP 0.489 0.09 0.700 0.02 9 Click to see details
UCEC -0.349 0.22 -0.500 0.13 7 Click to see details
LIHC -0.168 0.26 -0.277 0.14 17 Click to see details
PRAD 0.139 0.32 0.064 0.41 14 Click to see details
LUSC -0.308 0.35 -0.400 0.3 4 Click to see details
HNSC 0.096 0.4 -0.017 0.48 9 Click to see details
KIRC 0.051 0.42 0.119 0.31 19 Click to see details
KICH 0.015 0.48 0.006 0.49 10 Click to see details
KICH 0.015 0.48 0.006 0.49 10 Click to see details
KICH 0.015 0.48 0.006 0.49 10 Click to see details
KICH 0.015 0.48 0.006 0.49 10 Click to see details
KICH 0.015 0.48 0.006 0.49 10 Click to see details
59 hsa-miR-499a-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT130131 TXNIP thioredoxin interacting protein 2 2
MIRT133678 ETNK1 ethanolamine kinase 1 2 2
MIRT252103 NAPG NSF attachment protein gamma 2 2
MIRT260160 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT388009 DR1 down-regulator of transcription 1 2 2
MIRT441692 ABLIM1 actin binding LIM protein 1 2 6
MIRT447799 EPC2 enhancer of polycomb homolog 2 2 2
MIRT450657 STYX serine/threonine/tyrosine interacting protein 2 4
MIRT456843 ZNF460 zinc finger protein 460 2 2
MIRT464134 VPS35 VPS35, retromer complex component 2 2
MIRT465101 TSC22D3 TSC22 domain family member 3 2 4
MIRT470051 PTGFRN prostaglandin F2 receptor inhibitor 2 2
MIRT474146 LIMA1 LIM domain and actin binding 1 2 6
MIRT474153 LIFR LIF receptor alpha 2 2
MIRT485327 MYO1D myosin ID 2 2
MIRT496403 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT497280 MAF MAF bZIP transcription factor 2 2
MIRT500970 SPTSSA serine palmitoyltransferase small subunit A 2 2
MIRT501536 POM121C POM121 transmembrane nucleoporin C 2 6
MIRT505174 WDR76 WD repeat domain 76 2 4
MIRT505203 UQCRB ubiquinol-cytochrome c reductase binding protein 2 4
MIRT506745 LIN54 lin-54 DREAM MuvB core complex component 2 4
MIRT506799 KLHL15 kelch like family member 15 2 6
MIRT525718 DCAF12L2 DDB1 and CUL4 associated factor 12 like 2 2 2
MIRT530014 SRRM1 serine and arginine repetitive matrix 1 2 2
MIRT531457 PROSER2 proline and serine rich 2 2 2
MIRT532272 CD93 CD93 molecule 2 2
MIRT538715 CAPRIN2 caprin family member 2 2 4
MIRT547356 NAT8L N-acetyltransferase 8 like 2 2
MIRT551468 TRIM59 tripartite motif containing 59 2 2
MIRT555444 NT5C3A 5'-nucleotidase, cytosolic IIIA 2 2
MIRT555674 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT557816 FOXO1 forkhead box O1 2 2
MIRT557853 FIGN fidgetin, microtubule severing factor 2 2
MIRT557880 FEM1B fem-1 homolog B 2 4
MIRT562299 GLO1 glyoxalase I 2 2
MIRT563245 QRFPR pyroglutamylated RFamide peptide receptor 2 2
MIRT565571 SLC7A2 solute carrier family 7 member 2 2 2
MIRT566214 PTMA prothymosin, alpha 2 2
MIRT575544 Map4 microtubule-associated protein 4 2 2
MIRT609316 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT609362 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT611163 BTLA B and T lymphocyte associated 2 4
MIRT611749 CACNA1B calcium voltage-gated channel subunit alpha1 B 2 2
MIRT615019 ELK4 ELK4, ETS transcription factor 2 2
MIRT623317 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT624550 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT633934 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT635691 BMP10 bone morphogenetic protein 10 2 2
MIRT646438 DNAH8 dynein axonemal heavy chain 8 2 2
MIRT651940 UBN1 ubinuclein 1 2 2
MIRT663605 TBC1D22A TBC1 domain family member 22A 2 2
MIRT689759 PRR13 proline rich 13 2 2
MIRT691916 SRXN1 sulfiredoxin 1 2 2
MIRT698678 TEF TEF, PAR bZIP transcription factor 2 2
MIRT700924 PDS5A PDS5 cohesin associated factor A 2 2
MIRT707970 PDE12 phosphodiesterase 12 2 2
MIRT715290 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT722414 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-499a Erlotinib 176870 NSC718781 approved sensitive Low Osteosarcoma cell line (CD166)
hsa-mir-499a Cisplatin 5460033 NSC119875 approved resistant Low Cervical Cancer cell line (GH329, Hela, CaSki, Siha)
hsa-miR-499a-3p Trametinib 11707110 NSC758246 approved sensitive High Melanoma cell line (M14) (2uM)
hsa-miR-499a-3p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (M14) (2uM)
hsa-miR-499a-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-499a-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-499a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-499a-3p Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM47)
hsa-miR-499a-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-499a-3p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-499a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-miR-499a-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-499a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-499a-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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