miRTarBase - #MIRT475228


—
pre-miRNA Information
pre-miRNA hsa-mir-5189   
Genomic Coordinates chr16: 88468918 - 88469031
Description Homo sapiens miR-5189 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-5189-5p
Sequence 26| UCUGGGCACAGGCGGAUGGACAGG |49
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1253186568 1 dbSNP
rs1157467955 6 dbSNP
rs1375543253 7 dbSNP
rs188172752 9 dbSNP
rs1214792828 10 dbSNP
rs990027849 13 dbSNP
rs913161946 14 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol IKZF3   
Synonyms AIO, AIOLOS, ZNFN1A3
Description IKAROS family zinc finger 3
Transcript NM_012481   
Other Transcripts NM_183228 , NM_183229 , NM_183230 , NM_183231 , NM_183232   
Expression
Putative miRNA Targets on IKZF3
3'UTR of IKZF3
(miRNA target sites are highlighted)		 
>IKZF3|NM_012481|3'UTR
   1 ATATCTGGTCTCAGGGATTGCTCCTATGTATTCAGCATCGTTTCTAAAAACCAATGACCTCGCCTAACAGATTGCTCTCA
  81 AAACATACTCAGTTCCAAACTTCTTTTCATACCATTTTTAGCTGTGTTCACAGGGGTAGCCAGGGAAACACTGTCTTCCT
 161 TCAGAAATTATTCGCAGGTCTAGCATATTATTACTTTTGTGAAACCTTTGTTTTCCCATCAGGGACTTGAATTTTATGGA
 241 ATTTAAAAGCCAAAAAGGTATTTGGTCATTATCTTCTACAGCAGTGGAATGAGTGGTCCCGGAGATGTGCTATATGAAAC
 321 ATTCTTTCTGAGATATATCAACCACACGTGGAAAAGCCTTTCAGTCATACATGCAAATCCACAAAGAGGAAGAGCTGACC
 401 AGCTGACCTTGCTGGGAAGCCTCACCCTTCTGCCCTTCACAGGCTGAAGGGTTAAGATCTAATCTCCCTAATCTAAATGA
 481 CAGTCTAAGAGTAAGTAAAAGAACAGCCATAAAATAAGTATCTGTTACGAGTAACTGAAGACCCCATTCTCCAAGCATCA
 561 GATCCATTTCCTATCACAACATTTTTAAAAAATGTCATCTGATGGCACTTCTGCTTCTGTCCTTTACCTTCCCATCTCCA
 641 GTGAAAAGCTGAGCTGCTTTGGGCTAAACCAGTTGTCTATAGAAGAAAATCTATGCCAGAAGAACTCATGGTTTTAAATA
 721 TAGACCATCATCGAAACTCCAGAAATTTATCCACTGTGGATGATGACATCGCTTTCCTTTGGTCAAGGTTGGCAGAGCAA
 801 GGGTATAAAGGGGGAAATTGTTTGGCAGCACCAACAGAAAACAAACAAACAAAAAACAGCTACCTAAAACTTCTTGAAAG
 881 AGTTCATGGAGAATTGGTGATACAGACCCAAAGCAAATTTGCCAATGATATTTTCCACAAAAAAAGTCCAAAAAGTATGG
 961 CTCAGCCTCCCCCTCCCCACAGGAGAGGAATTGGAGATAGATGGCATGTGTGTTTAGATCGGAGTTGAGCTCCGGAATGG
1041 GGTGAGGAGGGACACCTCTATTGAGAGGTTCTCCTTGATCAGGCAGGCTTCGGCCCTTTTTTTCCCATTTAAATGGAACT
1121 GCTGTATTCCATGAAAATTCCTGAAAGTCTGATCACGGTTCTGCAGATGTATAAGTCATCCTTGTCACTCATAATATGTA
1201 CATACTATCAGGAGGAGTGCTGTTATCATGGTAAAATTAGCACTGGAATAGGAGGTCACAAAATGCTGGCTAATTAGCTA
1281 TGTGACTTTGAGAAATCGTTTAACTTTTTTTTTTTTTTTTTTTTTGAGACAGGATCTCACTCTGTTGCCCAGGCTGGAGT
1361 GCAGTGGTGCAATCATGGCTCAGTGCAGCCTCGACCTCCCCAGGCTCAGGTGATCCTCCCACCTCAGCCTCTTGAGTACT
1441 GGGACAACAAGTGCACACCACCATGTCTGGCTACATTTTGTTCTTTTTGTAGAGATAGGGGTCTCACTATGTTGCCCATG
1521 CTGGTCTTGAACTCCTGGGCTCAAGCAATCAGCCCGCCTCAGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACCAC
1601 ACCCAGCCTTATTTAACTCTTAAAACTCAGTTTCCGGCCAGGCTCGGTGGCTCACACCTGTAATCCCAACACTTTGGGAA
1681 GCCGAGGCAGGCGCATCATTTGAGGTCAGGAGTTCGAGACCAGCCTGACCCACATGGTGAAACCCTGTCTCTACTAAAAA
1761 TACAAAAATTAGCTGGGCAGTAGTGGCACATGCCTGTAATCCCAGCTACTCCGGAGGCTGAGGCAGAAAAATCGCTTAAG
1841 CCTGGGAGGTTGAGGTTGCGGTGAGTGGAGATCACACTACTGCACTCCAGTCTGGGCGACAGAGTGAGACCCTGTCTCAA
1921 ACAAAACAAAACAAAAACAAACAAACAAAAACAAAAAAAACTCAGTTTCCTCATCCATAAAATAGGAATTAGATTTCAAT
2001 GTTCTCTTAGGTCCCTTCTAGCTTTAATTCATATGTGATTATGCAGTAACCACAAGGTATTTTTTAAACCTCCTAATGTA
2081 TGGATATTAAGCAGAAGAGTATTTATATGAATACATGTTTCACATTCCTTTGGTATGAAAATGGTGTGTTAAGTTTTTCC
2161 TTTAACCACTGAGTTGTGAATGTGAAGAAGGTGGTGGAGAGGAACAAAAAACAGAAAGGTATTTTGATCTTGCCACAAAG
2241 CATACACACAAATTGGCACATGCAGCTGTTTGCCAAAGCCTTCTTTTTTTTTTTACTTTTTAAGAAATTATGTTAGGGAA
2321 AATAAATTCTGCTTCCAGGGACAACTTCATGGAGCCTATTTACAAATTAAGAGTCAGCTTAATTTGTAACATTTCTACCA
2401 GAGCCAAGAATCCCAAATTCCTGGTAGATTAGTGTTTTATTTCTAAGGGGCTTATGCATTCGGCTCCAACTCAACTCGTC
2481 TATGTGCTGCCAGTAATTAAAATGTTCCACCTCAGACTGCACAAATGGCTTATCCTTCTTTGTGGCATGGCGTCTGTCTC
2561 AGGAAAAAAGGTTTTATGAAATTCCATGGCAACAGTCCCAACATGTTTGAGACTTCAGCTAAAGGAATGGATGTATTTTG
2641 GTGTGTAGTCTTCAGTATATCACTGTATTTCCGTAATACTAGACTCCAAGCTATGCCAGATTGCTTATTCCCTTTGTGAA
2721 AGAGGAGTTGCTCATTACGTTCTTGAAATATCGCACATCCTGTTGGTTCTTCAAGGGACAAGAGAAAGAGAATTTGGAAG
2801 CAGGGATTAGTAGAAGAGAAAACGAGGGAAAGGAAGCCTTTCCACCAGATTAGTGTTCAAGTCTTTGCAGAGGAGACCAA
2881 CTTTTTTTGTTTTCTTTTGTTTTGAGACAGTCTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCA
2961 CGGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCTCACCACC
3041 AAGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAAGGTTTCACCATGTTGGCCAGGCCAGTCTCAAACTCCTGACCTCA
3121 GGTGATCTGCCCGCCTTGGCCTCCCACAGTGCTGGGATTACAGGCATGAGCTACCGCACCCAGCCTGAGACCACCTTTTG
3201 CATCTCAAGATTGTGAAACCAAGGCCCATTCCACCAGCCTGGGGACTCTTTTTATAGATATGATCCTCCTTTTTCCTGTG
3281 ACTAATGAATTTGCTGCATGATTTCTATTCTTCTGAGGTTAGTTTTCTGAGTAAGGTGACCACTCACAAAGGCACTTTCT
3361 TTGTGGCATTCTGAGCCTAGATTGGGGCCCATCAATTCCAGAAAAAATTTATGTGTGGAAACTCTGCATCCTTAAGTCTT
3441 GAAGTTGAACCAGATATGCAGTGGTTACCATCACACAGATAAACGCTGCCTTCTGTACATACCCCTTATGCTGTACTAAT
3521 TAACAAACCCCTTGCCAGGGCTGGGGAGGTGAGGGTGAAGGAGAATCTTAGCAGAAGGGCAGAGTCAGGACTTGCATCTG
3601 CCACTGCTGGGCACTGAAGCCCTGGAGCAGCTTCAGATAGTACCTGTACTTTCTCATGCAGACTCCCTCTGAACAAGAGC
3681 CTTGTAGGCCCCTCTCCTTCATTTCCCACCAGCCTCTTATCAGGCGGGCTTTCCACCATACACCCAGGAGGCCACGGTCT
3761 GAGGAACAACCAAACCCATGCAAAGGGCCGGGCGCGATAGCTCACGCCTGTAATGCCAGCACTTTGGGAGGCTGGGGCAG
3841 GCAGATCACCTGAGGTTGGGAGTTCGAGACCTGCCTGACCAACATGGAGAAACCCCCATCTCTACTAAAAATACAAAATT
3921 AGCCGGGCGTGATGGCACATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCG
4001 GAGGTTGCGGTGAGCCGAGATGGCACCACTGCACTCCAGCCTCGGCAACAAGAGCGAAACTCTGTCTAAAACAAAAACAA
4081 ACAAACAAACAAAAAAACCCAGGCAAAGTTTCCTTGCAGCCAAGGTGACAGAACTGGGCTGAGGGTGGAAAAGAAACAGA
4161 ACCAGTGCTCCAGGTGTTTTTTAATTTTTTAATTTATTTTTATTTTTTTTGTATATGTATATATATGTATGTATATTTTA
4241 GAGGACCAGGGTCTCACTATGTTGCCTAGGCCAGACTCAAACTCCTGTGCTCAAGCAATCCTGCCTCAGCCTCCCAAGTA
4321 GCTGGGATTACAGGCATGCACAAACAATGCCCAGCTCTCCAAATGTTTTCTGTCACTACCTGAAGTGTTGCATCGGTACT
4401 TCCTACGGAAAGAAAACTAAATAGAAGTGTCTCTCCCGTGAGCCCCCACCACTACCACCAGAAAAAAAAAAGAGAGAAAA
4481 TGAACTCATCAGTCTTTAGTTTCCTCAAGTTATTCTCCCAAAAAGACATTCGCCTTGGCACAGATAAGCCAGCTAATCTT
4561 ATGCTTTATGACCCACTGTGAGCTGTTCCTGACACAGCTTCTGACTTTGTCAGTGACAAAATTTCTCACCTTTTAAATGC
4641 AGTGCTTAACATTTTGTTAGGCCCATACTCAAAATCGGCCAGATATAAAATGACCTCAGATTTTGATCTCCTAGGCTCAA
4721 ACAATCCTCCTACCTCAGCCTCCCAAGTAGCTGGGACTATAGGCACACCACCATGCACAGCTAATTTTTTTTGTATTTTT
4801 CTGCAGAGATGGCGTTTCGCCATACTGCCCAGGCTAGTCTCAAAATCCTGGGCTCAAGCAATCTGCCCACCTCAGCCTCC
4881 CAAAGTGCTGGAACTACAGGCAAGAGCCACTGCGCCCAGCCACAACCTCAGATTTCTTTGGCAAACAGAAATGTTTAAAA
4961 ACACAAAATTTTGCTCAGGTGAAACACTGTGTTACTATCAAATCTCACATCCACATAAAGTTTTTCTTTTCGGCTTTGTT
5041 TCGTGAGGAACAGACAGAACAAAGTTTTTCCAGGTAGCATCTGTATCACTATTATTCTCCTATTTCCTGTACCACCCCCA
5121 CCTCCCCAAGCCCTACTGAATGTGAGGTTTAGAATGTTTTAAGGAGGGTCAGGTGCGGTGGCTCACGCCTGTAATCCCAG
5201 CACTTTGGGAGGCCAAGGCGGGCGGATCACCTGAGTTTGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCTGTC
5281 TCTACTAAAAATACAAAATTAGCCAGGCGTGGTGGCACATGCCTGTAATCCCAGCTACTTAGGAGGCTGAGGCAGGAGAA
5361 TCGCTTGAACCCAGGAGGAGGAGGTTGTGGTGAGCCGAGATCGTGCCATTGCACTCCAGCCTGGGTGACAGAGTGAGACT
5441 CCATCTCGAAAAAAAAAATACAAAAATTAGCTGGGTGTGGTGGTGCACACCTGTAATCCCAGCTACTCGGGAGGCTGACG
5521 CAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCGCCATTGCAATCCAGCCTGGACAACAGA
5601 GTGAGACTCCATCTCAAAAAAAAAAAAAAAAAGAATGTTTTAAGGAAAAAAATAGTACTGTTACATATAATCCCAGGTGA
5681 TAAGACCACAATGGAAATGTTTAAGTCCTCACTTTAAAGAGTACCCCACTGAGAAGAGGTATGTTGGACTCTAGCAGAGA
5761 TTTGGAAACTCTGGGACACTCAAGATGTGAAAGAGCCTGGCTATCTGAGGACTCAAAGAGTCAGCATCGGGACTTGTGAG
5841 CTCAAGAAGAGAAAAGGGAGTGGTGAAACTTTGTCCTAAAAGTTAGCACCAGGAACAGAAGAAAAAAACCCGATATATAG
5921 TGATACCTCATCTTTTAGAGAATGGGAAGCTATTTTTGTGTTCACACAGAAAGTATAGTTCAAAAAACCTCTATATCCAG
6001 AGTTCAGACAAGGAGAATGATTTGAGATATAAGTGCCGATGAAGGAGGTCAATTTTGATCTGAAACCAGCAGCTGGACCT
6081 GGGCCACCTCAGGAAAAGGACTCTGTTCTCCAAGGCAGCACGACTGAATGGTTCTGAGAATAAGCCAGGGTTCAGGACTC
6161 CTGACCCTTTAGGACCATGGACTCAGAAGAGCCTGAAGGACAATTGTGGGCTTTAAACTTCTGAGAGCTTGTAAAGTAAC
6241 ACAAGACTGTGCCTCTCCCTTGCCCCAGCTGTAGATAGTCTTTGCCCCACCATTGTTATGAAGATACACAGGGTTTTGCA
6321 GTTTGAATAAATTGGATACAAGTTTCCTCTTTTTTTTTTTCTTTTTGAGACAAAGTCTCGCTCTGTTTCCCCAGGCTGAG
6401 TGCAGTGGCACAATCAAGGCTTACTTGCCGCCTCAACCTCCTGGGCTCAAGCAACGAGCCATCCTCCCGTCTTAGCCTCC
6481 CAACTAGCTGAGACTACAGGCGTGGGTCACCACACCCAGCTAATTTTTGTACTTTTTGTAGAGACAGGGTCTCACCATGT
6561 TGCCCAGGCTGGTCCTGAACTCCTGGGCTCAAGTAATCTGCCCACCTCAGCCTCCCAAAGTGTTGGGGTTACAGGCGTGA
6641 GGCACCGCGGCTGGCCTGAGTTTCTTCTTAATACTGTATCACAATTGTGGGCTGTCTTATGTGTTGATATCGATTGAGCT
6721 ATTTGAAATAGGAATGTTAATGGGTGTATTAAATTTTTGTAAGGATATAACAATATCTACCTTCCAAGGATGTTGTGAGG
6801 TTTTCCATGATTTTGTATATGAGCTAATGTTACCTTTGAGGGGTGGTGTGCATTATGTTGGATGATTGTAAATTTTCAGT
6881 GGAAAATGTACCGTGTCCTAAATTTAAAGACATGAAAAATATCCCAAGATCATACTAGATCATAATAGCAATTCCTTTAC
6961 AAATGAATTATGGAGGTAACTGATCTCTAACAGTTTCCTTCATGTTGTTTTAATGCACAAGGGCAGAGGATCTGCTGACC
7041 CTTGGAACCAGCGTGAGCTAACCACGTGCTATAGACACTTCATGGTGTCGCACCCAGGGAAGTCAAAGCGCTTTGCTCCC
7121 TCACTGTCTGTGAGTCCTCAGCCATTAGTACCCCACCCCCCGCTGCTCCAAAACTTGAGTTATTTCAAATGTTTCTCACT
7201 GTTCATCTCTCCACTGACCCCACTCCAGAAAGCCTGGAGAGAGTCCCAAGATGCCACCCACCTTCCCCAATCCCTCGCCA
7281 CAGATCTGTGTCTATCTCACACTCTGTAAGTGCCGCTTTGCTTCTTCCTCTCTTGAAAAGACTGAGAACACACATTTTAA
7361 CATGTTAGGAAAATGGGGCAGCCTAAAAAATGACTGATCCCACCGCCAGTGACTCATGTATACTCCAGGCTAGCAGACAA
7441 GGCCCTTTTTGGTGGGCCTGCTTCTGTGGGTTCACAGAAACCAAATTACTGTGGGTTGCAAAGAATTAGCAGGTCATTTA
7521 CAAAGCAGACATCCCTTCACCCAGACTGTGGTTTTGCATGCTCAGGTTCTCAGTCTATGAGCTTTGGTGCAGGATCATTT
7601 TGGCTACTGGAAAAACCATAGCTTATTTTAAATTTCTGGTTGCCAAAGCCACCACACGTGTGGTCTGTGGATGACCATTG
7681 TCTGCAGAATGACGAGGAAGGAACAGAATGTGGTTTGGGGCTCAGGGTGGCCTTCCCACTGGGAGGGAAGGCGGGAGGGA
7761 GCCCTTGCCCTGGGTTTTGACACAGCCTGTGCTCACAGCCTCTCCTCTCATCTGCATTTCTCAGAAATGCCCTCCCTGCC
7841 CAGTGGTGACTTTCCCTCGTCACTCCTATGGAGTTCTACCTGGAGCCCAGCCATGTGTGGAACTGTGAAGTTTACTCCTC
7921 TGTAAAGATGGTTTAAAGAAAGTCAGCTTCTGAAATGTAACAATGCTAACCCTTGCTGGAACCCTGTAAGAAATAGCCCT
8001 GCTGATAGTTTTCTAGGTTTATCATGTTTGATTTTTACACTGAAAAATAAAAAAATCCTGGTATGTTTGAAATTAAAAAA
8081 AAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggaCAGGUAGGCGGAC-ACGGGUCu 5'
             |||: ||  :||| ||||||| 
Target 5' acaGTCTCTCGCTCTGTTGCCCAGg 3'
 2907 - 2931 165.00 -25.90
2 
miRNA  3' ggACAGGUAGGCGG-A-CACGGGUCu 5'
            || |  |:|||| |  ||||||| 
Target 5' gaTGGCGTTTCGCCATACTGCCCAGg 3'
 4808 - 4833 158.00 -22.10
3 
miRNA  3' ggacaggUAG-GCG-GAC-ACGGGUCu 5'
                 ||| | | ||| ||||||| 
Target 5' agacaggATCTCACTCTGTTGCCCAGg 3'
 1327 - 1353 153.00 -22.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30493732 10 COSMIC
COSN24384586 20 COSMIC
COSN30104547 22 COSMIC
COSN31553178 35 COSMIC
COSN30462552 39 COSMIC
COSN13718041 40 COSMIC
COSN31506976 44 COSMIC
COSN30499974 62 COSMIC
COSN26980272 66 COSMIC
COSN27113738 70 COSMIC
COSN20345106 88 COSMIC
COSN31770185 113 COSMIC
COSN30637299 160 COSMIC
COSN30140654 193 COSMIC
COSN27113739 201 COSMIC
COSN18001704 496 COSMIC
COSN27620087 503 COSMIC
COSN7166216 702 COSMIC
COSN7166215 899 COSMIC
COSN23547107 1393 COSMIC
COSN19607797 1653 COSMIC
COSN31769234 1662 COSMIC
COSN1718893 2014 COSMIC
COSN22544590 2109 COSMIC
COSN27596511 2284 COSMIC
COSN30727149 2304 COSMIC
COSN18723485 2551 COSMIC
COSN31770184 2775 COSMIC
COSN31770183 2777 COSMIC
COSN30565368 2882 COSMIC
COSN18915877 3024 COSMIC
COSN31770171 3147 COSMIC
COSN1196432 3283 COSMIC
COSN26701845 3315 COSMIC
COSN8393885 3557 COSMIC
COSN20634700 3681 COSMIC
COSN7166214 3925 COSMIC
COSN31770169 4082 COSMIC
COSN27109289 4394 COSMIC
COSN29059563 4461 COSMIC
COSN19074026 4627 COSMIC
COSN27742143 4759 COSMIC
COSN31770161 5011 COSMIC
COSN31770160 5015 COSMIC
COSN22720567 5106 COSMIC
COSN8242439 5509 COSMIC
COSN1196431 5645 COSMIC
COSN32065238 5727 COSMIC
COSN31770159 6203 COSMIC
COSN17461247 6290 COSMIC
COSN1196430 6361 COSMIC
COSN7166213 6373 COSMIC
COSN32063770 6380 COSMIC
COSN28472986 6408 COSMIC
COSN16421984 6445 COSMIC
COSN8393884 6454 COSMIC
COSN8836201 6593 COSMIC
COSN31770157 7186 COSMIC
COSN8836200 7220 COSMIC
COSN8836199 7368 COSMIC
COSN21472633 7392 COSMIC
COSN31769278 7538 COSMIC
COSN31995627 7649 COSMIC
COSN5220199 7684 COSMIC
COSN20812657 7693 COSMIC
COSN4769055 7757 COSMIC
rs907091 301 GWAS
rs2941509 849 GWAS
rs3764354 5220 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs763221325 2 dbSNP
rs775902225 4 dbSNP
rs982655715 7 dbSNP
rs1463896345 10 dbSNP
rs368887738 12 dbSNP
rs1283403452 23 dbSNP
rs760013051 30 dbSNP
rs777232562 36 dbSNP
rs1012187934 37 dbSNP
rs771486799 39 dbSNP
rs1233040472 40 dbSNP
rs746437844 45 dbSNP
rs557353006 49 dbSNP
rs1432229314 50 dbSNP
rs771541635 51 dbSNP
rs370349812 52 dbSNP
rs1034356310 54 dbSNP
rs1002918498 61 dbSNP
rs114554780 62 dbSNP
rs773644338 68 dbSNP
rs113671163 74 dbSNP
rs1484486218 77 dbSNP
rs1015084706 87 dbSNP
rs963744226 88 dbSNP
rs1255847369 99 dbSNP
rs1017954637 112 dbSNP
rs1005485800 125 dbSNP
rs1409389130 135 dbSNP
rs2952141 144 dbSNP
rs1176088344 150 dbSNP
rs1360397512 151 dbSNP
rs1464450430 152 dbSNP
rs1020846941 162 dbSNP
rs1370916494 173 dbSNP
rs1010426519 174 dbSNP
rs1290439851 178 dbSNP
rs1348927926 182 dbSNP
rs1049273727 187 dbSNP
rs1302021695 193 dbSNP
rs1033091403 197 dbSNP
rs190237031 206 dbSNP
rs1208610698 207 dbSNP
rs1433071750 207 dbSNP
rs1280283290 223 dbSNP
rs748697329 224 dbSNP
rs1165672332 232 dbSNP
rs538477840 239 dbSNP
rs1250078537 242 dbSNP
rs781496956 250 dbSNP
rs1461138704 265 dbSNP
rs777295733 266 dbSNP
rs567748854 273 dbSNP
rs1426606159 282 dbSNP
rs1045722590 292 dbSNP
rs1476257016 296 dbSNP
rs1242694081 298 dbSNP
rs907091 301 dbSNP
rs1305880188 314 dbSNP
rs1369751758 319 dbSNP
rs534496858 320 dbSNP
rs1254354958 331 dbSNP
rs1369775421 333 dbSNP
rs1156540228 339 dbSNP
rs944465432 347 dbSNP
rs923717058 348 dbSNP
rs1320778163 349 dbSNP
rs1231268044 353 dbSNP
rs567139793 357 dbSNP
rs1437641665 358 dbSNP
rs1287267782 371 dbSNP
rs977931108 372 dbSNP
rs919675065 378 dbSNP
rs76072302 381 dbSNP
rs145732147 383 dbSNP
rs1248122498 386 dbSNP
rs1451208188 386 dbSNP
rs1297236901 389 dbSNP
rs569381918 394 dbSNP
rs986500549 396 dbSNP
rs550789387 401 dbSNP
rs1405778890 407 dbSNP
rs1165740762 408 dbSNP
rs959278024 409 dbSNP
rs1034348049 419 dbSNP
rs913512924 420 dbSNP
rs529349825 425 dbSNP
rs1437844549 427 dbSNP
rs775968961 429 dbSNP
rs1296114286 431 dbSNP
rs981882623 438 dbSNP
rs1326695309 444 dbSNP
rs1339109855 445 dbSNP
rs989376801 447 dbSNP
rs1291565584 450 dbSNP
rs971492043 468 dbSNP
rs770456297 471 dbSNP
rs957574112 477 dbSNP
rs1268151047 486 dbSNP
rs1348405192 489 dbSNP
rs561738012 491 dbSNP
rs1331113677 496 dbSNP
rs1411521673 501 dbSNP
rs1163025205 503 dbSNP
rs140541594 504 dbSNP
rs1033148774 505 dbSNP
rs1183320540 509 dbSNP
rs1001546055 516 dbSNP
rs1403779180 519 dbSNP
rs1164512032 521 dbSNP
rs1004982626 524 dbSNP
rs778364591 528 dbSNP
rs887910238 538 dbSNP
rs1396768376 545 dbSNP
rs1449417182 549 dbSNP
rs1027782333 564 dbSNP
rs1014287958 566 dbSNP
rs1193764031 573 dbSNP
rs540395595 578 dbSNP
rs1232277095 582 dbSNP
rs528385729 586 dbSNP
rs900799983 587 dbSNP
rs1206343610 591 dbSNP
rs756952707 592 dbSNP
rs1437989181 602 dbSNP
rs753382907 608 dbSNP
rs879228572 618 dbSNP
rs944395498 619 dbSNP
rs902192856 638 dbSNP
rs564023066 663 dbSNP
rs1274398841 671 dbSNP
rs942401273 674 dbSNP
rs185478724 679 dbSNP
rs946492090 680 dbSNP
rs1304773404 684 dbSNP
rs1357752975 686 dbSNP
rs538729941 688 dbSNP
rs1288570600 693 dbSNP
rs1365579961 702 dbSNP
rs990690194 703 dbSNP
rs937903384 704 dbSNP
rs1226192191 706 dbSNP
rs1278401726 720 dbSNP
rs1345140948 721 dbSNP
rs913471733 728 dbSNP
rs574888974 732 dbSNP
rs1370140312 745 dbSNP
rs927893836 750 dbSNP
rs1307217065 767 dbSNP
rs981447080 769 dbSNP
rs957631516 770 dbSNP
rs1427547869 771 dbSNP
rs1253723618 781 dbSNP
rs373643986 785 dbSNP
rs541567149 792 dbSNP
rs1179966816 797 dbSNP
rs1377254727 802 dbSNP
rs1363278383 803 dbSNP
rs1174822105 810 dbSNP
rs1478419056 810 dbSNP
rs1014934295 813 dbSNP
rs1176690082 818 dbSNP
rs983902788 823 dbSNP
rs1434652252 828 dbSNP
rs1432456595 842 dbSNP
rs1372826489 845 dbSNP
rs866742497 846 dbSNP
rs980263614 847 dbSNP
rs2941509 849 dbSNP
rs1470326262 850 dbSNP
rs1250568197 854 dbSNP
rs1272994200 856 dbSNP
rs1346989290 857 dbSNP
rs1229058123 858 dbSNP
rs1276465904 861 dbSNP
rs1339860282 869 dbSNP
rs1203508433 882 dbSNP
rs996331629 887 dbSNP
rs1250158854 889 dbSNP
rs1452239273 902 dbSNP
rs964915157 903 dbSNP
rs1210038401 905 dbSNP
rs767627727 907 dbSNP
rs950710328 912 dbSNP
rs1019129895 922 dbSNP
rs552673903 928 dbSNP
rs1460828228 930 dbSNP
rs1286462130 937 dbSNP
rs1171469904 941 dbSNP
rs902139316 945 dbSNP
rs1224374005 946 dbSNP
rs1388166323 946 dbSNP
rs1323229807 951 dbSNP
rs534351861 955 dbSNP
rs149791960 965 dbSNP
rs1016756995 969 dbSNP
rs774618473 972 dbSNP
rs1211885072 973 dbSNP
rs1271294476 987 dbSNP
rs1006756313 991 dbSNP
rs558490048 1005 dbSNP
rs1250519378 1006 dbSNP
rs1407830325 1007 dbSNP
rs1357131366 1011 dbSNP
rs1427100064 1020 dbSNP
rs539885109 1020 dbSNP
rs1011069365 1023 dbSNP
rs182238726 1033 dbSNP
rs889530995 1034 dbSNP
rs1393069205 1046 dbSNP
rs1160702684 1050 dbSNP
rs1457372810 1061 dbSNP
rs1457287209 1064 dbSNP
rs893594210 1069 dbSNP
rs1179560456 1091 dbSNP
rs766514710 1092 dbSNP
rs1342062298 1102 dbSNP
rs933738310 1104 dbSNP
rs143684620 1107 dbSNP
rs1291710959 1109 dbSNP
rs937850839 1115 dbSNP
rs1482582957 1119 dbSNP
rs140096656 1126 dbSNP
rs1485140875 1129 dbSNP
rs1205092934 1137 dbSNP
rs1257244184 1145 dbSNP
rs1425980295 1149 dbSNP
rs368011231 1152 dbSNP
rs939955379 1156 dbSNP
rs1416790496 1157 dbSNP
rs1472721787 1171 dbSNP
rs907864851 1176 dbSNP
rs983507741 1178 dbSNP
rs952120082 1187 dbSNP
rs920704712 1188 dbSNP
rs1303405116 1190 dbSNP
rs1404043838 1192 dbSNP
rs67571561 1196 dbSNP
rs1311280252 1197 dbSNP
rs926238434 1201 dbSNP
rs546424851 1207 dbSNP
rs770211486 1211 dbSNP
rs1309188647 1218 dbSNP
rs374392489 1230 dbSNP
rs1238936124 1243 dbSNP
rs1257139266 1244 dbSNP
rs528249696 1249 dbSNP
rs146233608 1251 dbSNP
rs1257264384 1265 dbSNP
rs967024118 1268 dbSNP
rs141771580 1269 dbSNP
rs1387280166 1290 dbSNP
rs1010603600 1297 dbSNP
rs1156249750 1298 dbSNP
rs893542242 1299 dbSNP
rs1418039826 1302 dbSNP
rs1462714345 1304 dbSNP
rs1368648921 1315 dbSNP
rs1379362087 1322 dbSNP
rs1156420692 1326 dbSNP
rs1172714801 1326 dbSNP
rs1279999634 1326 dbSNP
rs1300167225 1326 dbSNP
rs1370972511 1326 dbSNP
rs1410615151 1326 dbSNP
rs1432803655 1326 dbSNP
rs71149801 1326 dbSNP
rs778678418 1326 dbSNP
rs1164570098 1330 dbSNP
rs1206815389 1336 dbSNP
rs1422412340 1341 dbSNP
rs1480019617 1342 dbSNP
rs530674651 1348 dbSNP
rs1268847234 1353 dbSNP
rs1001962521 1366 dbSNP
rs1026292781 1370 dbSNP
rs1464790693 1372 dbSNP
rs906327323 1381 dbSNP
rs1352918814 1384 dbSNP
rs1461672795 1392 dbSNP
rs1391174239 1393 dbSNP
rs1294144423 1398 dbSNP
rs1373316284 1406 dbSNP
rs973426319 1409 dbSNP
rs962608471 1412 dbSNP
rs563139263 1414 dbSNP
rs1366370682 1422 dbSNP
rs1016896302 1424 dbSNP
rs1244068825 1433 dbSNP
rs1215591606 1437 dbSNP
rs1046267134 1440 dbSNP
rs1469104152 1451 dbSNP
rs939926634 1456 dbSNP
rs908485711 1458 dbSNP
rs1048177313 1464 dbSNP
rs1243862150 1468 dbSNP
rs1319697088 1475 dbSNP
rs1192900018 1487 dbSNP
rs139948257 1488 dbSNP
rs1229072516 1489 dbSNP
rs192416649 1495 dbSNP
rs1317994176 1498 dbSNP
rs374830016 1498 dbSNP
rs974762393 1500 dbSNP
rs370739376 1502 dbSNP
rs1442427842 1507 dbSNP
rs748522475 1509 dbSNP
rs1165811444 1514 dbSNP
rs1391069619 1534 dbSNP
rs1292573621 1543 dbSNP
rs1460002323 1548 dbSNP
rs964766085 1555 dbSNP
rs1389947000 1556 dbSNP
rs912043380 1558 dbSNP
rs1375147762 1562 dbSNP
rs987689840 1563 dbSNP
rs1294792379 1566 dbSNP
rs997921304 1585 dbSNP
rs891562380 1588 dbSNP
rs1268211632 1592 dbSNP
rs1052706148 1596 dbSNP
rs935701583 1598 dbSNP
rs967350543 1602 dbSNP
rs1473026602 1623 dbSNP
rs1388818009 1634 dbSNP
rs1021230267 1635 dbSNP
rs989748344 1636 dbSNP
rs957659156 1640 dbSNP
rs567166625 1645 dbSNP
rs1001952621 1646 dbSNP
rs948978335 1656 dbSNP
rs1208290905 1660 dbSNP
rs917398731 1663 dbSNP
rs1481706476 1666 dbSNP
rs1314320393 1674 dbSNP
rs879885068 1679 dbSNP
rs993425476 1683 dbSNP
rs187310898 1684 dbSNP
rs146033721 1686 dbSNP
rs1221973999 1688 dbSNP
rs573468484 1692 dbSNP
rs558343804 1693 dbSNP
rs919366376 1698 dbSNP
rs1484791353 1705 dbSNP
rs1187530780 1708 dbSNP
rs1004074248 1712 dbSNP
rs973395069 1715 dbSNP
rs377404929 1716 dbSNP
rs1471225094 1718 dbSNP
rs1384731260 1725 dbSNP
rs1157339046 1729 dbSNP
rs1398133196 1730 dbSNP
rs1415562958 1734 dbSNP
rs1175874657 1737 dbSNP
rs886962052 1745 dbSNP
rs963413761 1754 dbSNP
rs182262115 1769 dbSNP
rs747493900 1774 dbSNP
rs931235837 1776 dbSNP
rs1369308226 1781 dbSNP
rs769523287 1781 dbSNP
rs954116662 1782 dbSNP
rs1345548545 1788 dbSNP
rs899129774 1789 dbSNP
rs998455303 1795 dbSNP
rs955807546 1801 dbSNP
rs1251601392 1803 dbSNP
rs1031421386 1807 dbSNP
rs190032182 1812 dbSNP
rs1377152252 1819 dbSNP
rs943447595 1821 dbSNP
rs904161510 1822 dbSNP
rs1421142679 1823 dbSNP
rs1044051020 1826 dbSNP
rs1182695420 1832 dbSNP
rs778417498 1834 dbSNP
rs1434560543 1849 dbSNP
rs185690285 1859 dbSNP
rs535826651 1860 dbSNP
rs1398113149 1865 dbSNP
rs1013148059 1867 dbSNP
rs1327558528 1882 dbSNP
rs1331204123 1884 dbSNP
rs1442982324 1885 dbSNP
rs1301210163 1890 dbSNP
rs945542080 1896 dbSNP
rs181345226 1897 dbSNP
rs141810094 1898 dbSNP
rs1194314067 1900 dbSNP
rs1057288096 1904 dbSNP
rs1337208719 1910 dbSNP
rs1288569214 1911 dbSNP
rs989692869 1914 dbSNP
rs958315343 1920 dbSNP
rs1251741459 1937 dbSNP
rs1454231694 1938 dbSNP
rs1409672558 1946 dbSNP
rs1194260460 1950 dbSNP
rs1375175600 1950 dbSNP
rs929500333 1950 dbSNP
rs1349021438 1952 dbSNP
rs748983318 1953 dbSNP
rs1167015033 1956 dbSNP
rs1315107474 1956 dbSNP
rs1394536358 1961 dbSNP
rs570873502 1961 dbSNP
rs35708591 1966 dbSNP
rs980463899 1970 dbSNP
rs376446296 1976 dbSNP
rs942101958 1978 dbSNP
rs910531550 1981 dbSNP
rs986153214 1983 dbSNP
rs1170935410 1986 dbSNP
rs755785672 1993 dbSNP
rs752472991 1998 dbSNP
rs953974077 1999 dbSNP
rs1335533264 2005 dbSNP
rs1024705436 2006 dbSNP
rs1468396342 2015 dbSNP
rs976608753 2031 dbSNP
rs1471697644 2033 dbSNP
rs1192020499 2034 dbSNP
rs956026040 2041 dbSNP
rs1189304278 2056 dbSNP
rs1004385356 2057 dbSNP
rs1162093826 2065 dbSNP
rs1442974294 2081 dbSNP
rs999871235 2085 dbSNP
rs113162064 2099 dbSNP
rs1198284748 2105 dbSNP
rs564055088 2107 dbSNP
rs1026775093 2110 dbSNP
rs1381493869 2114 dbSNP
rs995379554 2115 dbSNP
rs1227415223 2117 dbSNP
rs143460560 2123 dbSNP
rs188710489 2124 dbSNP
rs1013027747 2127 dbSNP
rs530734610 2133 dbSNP
rs899792745 2135 dbSNP
rs1291464258 2151 dbSNP
rs1334328506 2152 dbSNP
rs1240350874 2153 dbSNP
rs149262106 2153 dbSNP
rs943405632 2161 dbSNP
rs890470815 2168 dbSNP
rs1204864718 2189 dbSNP
rs1448226102 2196 dbSNP
rs1057514901 2202 dbSNP
rs1449173552 2211 dbSNP
rs1185409428 2212 dbSNP
rs1256154523 2212 dbSNP
rs1419218668 2218 dbSNP
rs78848907 2224 dbSNP
rs1161178474 2229 dbSNP
rs1051827096 2231 dbSNP
rs551201402 2236 dbSNP
rs188500605 2244 dbSNP
rs1361933628 2255 dbSNP
rs945455611 2256 dbSNP
rs1173986697 2262 dbSNP
rs1384066122 2262 dbSNP
rs1377068159 2281 dbSNP
rs1416833520 2282 dbSNP
rs1389479503 2283 dbSNP
rs993768529 2285 dbSNP
rs914070576 2294 dbSNP
rs1240106132 2295 dbSNP
rs1281437733 2295 dbSNP
rs879408164 2295 dbSNP
rs1420249258 2296 dbSNP
rs528560806 2316 dbSNP
rs1208270913 2317 dbSNP
rs1472994063 2318 dbSNP
rs1480760695 2331 dbSNP
rs1178363160 2332 dbSNP
rs1367885053 2336 dbSNP
rs1247842821 2337 dbSNP
rs936894859 2341 dbSNP
rs138745067 2357 dbSNP
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rs1432701600 2377 dbSNP
rs1050440836 2378 dbSNP
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rs1466152626 2391 dbSNP
rs933354605 2398 dbSNP
rs1462694252 2404 dbSNP
rs1299930927 2412 dbSNP
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rs1446654553 2441 dbSNP
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rs529249551 2478 dbSNP
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rs924421199 2492 dbSNP
rs978591750 2504 dbSNP
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rs1397238689 2595 dbSNP
rs1439379102 2600 dbSNP
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rs571250885 2611 dbSNP
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rs1215928412 2628 dbSNP
rs1293082425 2630 dbSNP
rs1324445516 2646 dbSNP
rs994127620 2654 dbSNP
rs1274514973 2661 dbSNP
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rs1451287621 2678 dbSNP
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rs1008574910 2687 dbSNP
rs67919571 2692 dbSNP
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rs1052237784 2720 dbSNP
rs889200196 2723 dbSNP
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rs1207697360 2760 dbSNP
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rs1284937084 2783 dbSNP
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rs750719163 2846 dbSNP
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rs1353002547 2869 dbSNP
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rs71355411 2925 dbSNP
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rs1257569501 3300 dbSNP
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rs913056579 4000 dbSNP
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rs775707551 4044 dbSNP
rs536571570 4052 dbSNP
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rs547451665 4079 dbSNP
rs1280137273 4084 dbSNP
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rs924089393 4092 dbSNP
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rs978254673 4094 dbSNP
rs1220074725 4098 dbSNP
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rs1253624372 4200 dbSNP
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rs1491341504 4210 dbSNP
rs1258816130 4211 dbSNP
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rs1052920060 4220 dbSNP
rs1201474541 4226 dbSNP
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rs1278882810 4233 dbSNP
rs1342500690 4234 dbSNP
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rs1007552793 4403 dbSNP
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rs2941521 4410 dbSNP
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rs1382700956 4466 dbSNP
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rs999952485 4498 dbSNP
rs1334569772 4504 dbSNP
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rs1027916779 4522 dbSNP
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rs1044291855 4541 dbSNP
rs1375206004 4548 dbSNP
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rs1301620080 4562 dbSNP
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rs1057425317 4593 dbSNP
rs369606415 4595 dbSNP
rs1318472869 4597 dbSNP
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rs1191563934 4620 dbSNP
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rs1220388855 4706 dbSNP
rs946982571 4711 dbSNP
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rs1204982131 4808 dbSNP
rs1029892474 4813 dbSNP
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rs1456053305 4818 dbSNP
rs977423434 4819 dbSNP
rs1360774351 4823 dbSNP
rs955659116 4830 dbSNP
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rs772493271 4833 dbSNP
rs1228859827 4835 dbSNP
rs999944229 4838 dbSNP
rs1319763008 4839 dbSNP
rs1220526008 4847 dbSNP
rs904307983 4851 dbSNP
rs908553781 4854 dbSNP
rs537966462 4861 dbSNP
rs1218837494 4868 dbSNP
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rs1485816991 4876 dbSNP
rs1490571702 4876 dbSNP
rs1027472148 4885 dbSNP
rs779707221 4890 dbSNP
rs964486995 4897 dbSNP
rs760063502 4898 dbSNP
rs1380477612 4900 dbSNP
rs1421170392 4901 dbSNP
rs1019070504 4907 dbSNP
rs1389738167 4913 dbSNP
rs1320142529 4914 dbSNP
rs772617549 4925 dbSNP
rs1376889610 4927 dbSNP
rs929216093 4936 dbSNP
rs897157995 4943 dbSNP
rs1037026307 4953 dbSNP
rs1309756246 4970 dbSNP
rs1354648879 4974 dbSNP
rs1042055061 4975 dbSNP
rs1282233431 4993 dbSNP
rs1290391850 5001 dbSNP
rs1210916781 5017 dbSNP
rs767113537 5020 dbSNP
rs567213529 5021 dbSNP
rs747803048 5031 dbSNP
rs72832927 5032 dbSNP
rs1156518704 5043 dbSNP
rs185797389 5048 dbSNP
rs938216172 5066 dbSNP
rs1414472561 5067 dbSNP
rs1450786446 5078 dbSNP
rs530206975 5080 dbSNP
rs1192040676 5092 dbSNP
rs1046885716 5099 dbSNP
rs1292507509 5101 dbSNP
rs1331767082 5102 dbSNP
rs940102894 5103 dbSNP
rs1449278933 5106 dbSNP
rs1359421034 5111 dbSNP
rs908522793 5119 dbSNP
rs1290205042 5120 dbSNP
rs984145388 5120 dbSNP
rs1230794265 5128 dbSNP
rs1350248284 5133 dbSNP
rs922771091 5135 dbSNP
rs951930274 5137 dbSNP
rs750549268 5142 dbSNP
rs768413333 5146 dbSNP
rs1366032854 5156 dbSNP
rs1459419813 5163 dbSNP
rs1269614671 5164 dbSNP
rs1231895146 5166 dbSNP
rs964866363 5167 dbSNP
rs956315674 5168 dbSNP
rs1428919940 5175 dbSNP
rs1426660426 5176 dbSNP
rs1018791296 5177 dbSNP
rs1031334170 5179 dbSNP
rs978452528 5181 dbSNP
rs1402379149 5182 dbSNP
rs1325333656 5186 dbSNP
rs1327964830 5187 dbSNP
rs968392119 5188 dbSNP
rs1425045614 5196 dbSNP
rs1022684305 5197 dbSNP
rs1013087411 5201 dbSNP
rs1008577723 5211 dbSNP
rs1276665241 5218 dbSNP
rs959860499 5219 dbSNP
rs3764354 5220 dbSNP
rs993365808 5223 dbSNP
rs897773442 5224 dbSNP
rs1010559710 5225 dbSNP
rs1451802456 5228 dbSNP
rs1036972619 5231 dbSNP
rs1223393384 5235 dbSNP
rs1166767029 5237 dbSNP
rs1266149768 5239 dbSNP
rs1474245854 5240 dbSNP
rs1005487694 5243 dbSNP
rs1479788315 5244 dbSNP
rs1248073495 5246 dbSNP
rs888460121 5247 dbSNP
rs1049803237 5250 dbSNP
rs932731700 5252 dbSNP
rs547696096 5261 dbSNP
rs1406157716 5263 dbSNP
rs1041644174 5265 dbSNP
rs934887013 5269 dbSNP
rs1002469887 5270 dbSNP
rs1363944229 5273 dbSNP
rs183012176 5276 dbSNP
rs1278938433 5281 dbSNP
rs1272424898 5286 dbSNP
rs1046622683 5291 dbSNP
rs1225944599 5306 dbSNP
rs979021967 5309 dbSNP
rs1343767872 5319 dbSNP
rs968338422 5321 dbSNP
rs915563513 5322 dbSNP
rs1347471094 5338 dbSNP
rs1275655635 5361 dbSNP
rs867043283 5362 dbSNP
rs1490091169 5363 dbSNP
rs991250658 5364 dbSNP
rs960092692 5373 dbSNP
rs1035514249 5387 dbSNP
rs1192453123 5390 dbSNP
rs887220236 5396 dbSNP
rs993311926 5397 dbSNP
rs961869021 5402 dbSNP
rs1383564365 5403 dbSNP
rs1048419086 5407 dbSNP
rs1426915884 5408 dbSNP
rs1298849790 5410 dbSNP
rs1387309674 5422 dbSNP
rs1381022488 5425 dbSNP
rs1318174126 5430 dbSNP
rs1341611803 5440 dbSNP
rs529270922 5442 dbSNP
rs191896497 5447 dbSNP
rs1479874964 5448 dbSNP
rs1313416994 5449 dbSNP
rs565305279 5456 dbSNP
rs1341843495 5459 dbSNP
rs1358247663 5459 dbSNP
rs796978716 5459 dbSNP
rs1348005556 5460 dbSNP
rs1204041157 5470 dbSNP
rs931342879 5475 dbSNP
rs1427670892 5476 dbSNP
rs543419560 5481 dbSNP
rs1444083038 5483 dbSNP
rs1181478226 5504 dbSNP
rs1242340562 5507 dbSNP
rs779870305 5508 dbSNP
rs1365768979 5509 dbSNP
rs1451653812 5514 dbSNP
rs921277987 5519 dbSNP
rs576515916 5520 dbSNP
rs1483694491 5523 dbSNP
rs1335118204 5524 dbSNP
rs1382575049 5526 dbSNP
rs1232793109 5529 dbSNP
rs975035573 5531 dbSNP
rs3764355 5546 dbSNP
rs1333634634 5547 dbSNP
rs139914447 5550 dbSNP
rs1256104718 5552 dbSNP
rs1346994478 5554 dbSNP
rs1201742989 5563 dbSNP
rs144087337 5564 dbSNP
rs553968805 5565 dbSNP
rs1321621334 5566 dbSNP
rs1252873918 5570 dbSNP
rs1417591041 5571 dbSNP
rs149531067 5572 dbSNP
rs577831423 5573 dbSNP
rs1471236278 5577 dbSNP
rs911695467 5579 dbSNP
rs1405998962 5583 dbSNP
rs987292529 5588 dbSNP
rs187084990 5593 dbSNP
rs1390499536 5594 dbSNP
rs1297535679 5597 dbSNP
rs1439851880 5599 dbSNP
rs1360406893 5602 dbSNP
rs1346923444 5607 dbSNP
rs1221162355 5608 dbSNP
rs537426584 5611 dbSNP
rs1469001710 5612 dbSNP
rs1403409422 5613 dbSNP
rs1339770287 5614 dbSNP
rs1303387242 5615 dbSNP
rs71300063 5616 dbSNP
rs1420042247 5622 dbSNP
rs1407627417 5631 dbSNP
rs1175998926 5632 dbSNP
rs1020698726 5633 dbSNP
rs114737291 5633 dbSNP
rs1195506880 5633 dbSNP
rs1268138961 5633 dbSNP
rs35792252 5633 dbSNP
rs1353170658 5635 dbSNP
rs1461159774 5636 dbSNP
rs371505083 5636 dbSNP
rs1474030966 5638 dbSNP
rs201769894 5645 dbSNP
rs1402501153 5650 dbSNP
rs1016108860 5652 dbSNP
rs190235171 5653 dbSNP
rs35833706 5653 dbSNP
rs72538185 5653 dbSNP
rs1238154340 5654 dbSNP
rs1306774240 5655 dbSNP
rs989191388 5656 dbSNP
rs1292695293 5659 dbSNP
rs567381247 5663 dbSNP
rs1220299112 5668 dbSNP
rs1460189727 5677 dbSNP
rs750326637 5680 dbSNP
rs1050229187 5691 dbSNP
rs1210433340 5692 dbSNP
rs1188858287 5703 dbSNP
rs1417999805 5707 dbSNP
rs1428230531 5708 dbSNP
rs1317303546 5709 dbSNP
rs1165957263 5718 dbSNP
rs1386664681 5742 dbSNP
rs28432878 5744 dbSNP
rs571253132 5745 dbSNP
rs1041215641 5746 dbSNP
rs1360676972 5748 dbSNP
rs1390405979 5751 dbSNP
rs934787096 5752 dbSNP
rs924780937 5762 dbSNP
rs1381210193 5780 dbSNP
rs1315195013 5787 dbSNP
rs1043290060 5792 dbSNP
rs753900915 5793 dbSNP
rs1316930040 5802 dbSNP
rs1361820952 5804 dbSNP
rs1244117802 5807 dbSNP
rs540676981 5816 dbSNP
rs1451257785 5818 dbSNP
rs1403528021 5820 dbSNP
rs1218058290 5828 dbSNP
rs1025135537 5829 dbSNP
rs1485845634 5831 dbSNP
rs1004418885 5852 dbSNP
rs779314202 5860 dbSNP
rs1245412564 5861 dbSNP
rs1442383739 5867 dbSNP
rs1162613224 5885 dbSNP
rs887189324 5887 dbSNP
rs915569610 5887 dbSNP
rs1401879233 5891 dbSNP
rs1156340423 5903 dbSNP
rs1048470585 5909 dbSNP
rs1344489803 5909 dbSNP
rs931426719 5911 dbSNP
rs536486213 5912 dbSNP
rs1450716200 5914 dbSNP
rs1344994973 5916 dbSNP
rs1314562697 5917 dbSNP
rs899806708 5920 dbSNP
rs764366213 5923 dbSNP
rs1407613569 5924 dbSNP
rs991589856 5932 dbSNP
rs1204928920 5936 dbSNP
rs1386383628 5937 dbSNP
rs943267128 5937 dbSNP
rs911841754 5943 dbSNP
rs551137687 5953 dbSNP
rs987261285 5971 dbSNP
rs75177049 5972 dbSNP
rs1442853440 5973 dbSNP
rs1233044621 5977 dbSNP
rs866831368 5978 dbSNP
rs1249905307 5981 dbSNP
rs1189474793 5982 dbSNP
rs945171651 5998 dbSNP
rs1406671495 5999 dbSNP
rs1433688001 6004 dbSNP
rs913744300 6010 dbSNP
rs1403821462 6011 dbSNP
rs1485639398 6016 dbSNP
rs1259963346 6020 dbSNP
rs1355305021 6024 dbSNP
rs928348455 6025 dbSNP
rs989163610 6029 dbSNP
rs971802613 6037 dbSNP
rs565938718 6038 dbSNP
rs1285682796 6042 dbSNP
rs73985217 6049 dbSNP
rs971379628 6052 dbSNP
rs1025269578 6057 dbSNP
rs1439172184 6067 dbSNP
rs141152449 6076 dbSNP
rs565750872 6087 dbSNP
rs1480438890 6095 dbSNP
rs1299114055 6099 dbSNP
rs1200988025 6108 dbSNP
rs953454994 6115 dbSNP
rs764329908 6121 dbSNP
rs868384851 6122 dbSNP
rs1480092368 6124 dbSNP
rs1027173315 6134 dbSNP
rs1287537702 6141 dbSNP
rs997278601 6144 dbSNP
rs1327024399 6149 dbSNP
rs1354181963 6150 dbSNP
rs1439037020 6156 dbSNP
rs138700372 6162 dbSNP
rs899942454 6166 dbSNP
rs1163513069 6177 dbSNP
rs1040100131 6178 dbSNP
rs1223489426 6183 dbSNP
rs1423229861 6202 dbSNP
rs1019675981 6204 dbSNP
rs891127854 6213 dbSNP
rs531604748 6214 dbSNP
rs1271779948 6230 dbSNP
rs1490420953 6236 dbSNP
rs903348494 6240 dbSNP
rs183162547 6242 dbSNP
rs1266211609 6247 dbSNP
rs947650040 6250 dbSNP
rs1171182437 6252 dbSNP
rs543153381 6254 dbSNP
rs1490162565 6255 dbSNP
rs894741814 6257 dbSNP
rs1243784766 6258 dbSNP
rs945310573 6261 dbSNP
rs1259764769 6269 dbSNP
rs376485113 6284 dbSNP
rs560409176 6285 dbSNP
rs928313663 6290 dbSNP
rs1221433550 6293 dbSNP
rs1165518939 6299 dbSNP
rs1363848087 6299 dbSNP
rs1357061667 6300 dbSNP
rs1276286091 6311 dbSNP
rs1319478072 6318 dbSNP
rs537492051 6318 dbSNP
rs1306354373 6333 dbSNP
rs774850335 6341 dbSNP
rs1247791822 6349 dbSNP
rs970380881 6355 dbSNP
rs1388075379 6359 dbSNP
rs1263707459 6361 dbSNP
rs371218166 6361 dbSNP
rs796115680 6361 dbSNP
rs917598081 6361 dbSNP
rs1346680107 6365 dbSNP
rs545188086 6366 dbSNP
rs1192160914 6367 dbSNP
rs1303129119 6367 dbSNP
rs1403455213 6368 dbSNP
rs758154152 6375 dbSNP
rs577901402 6379 dbSNP
rs1027141936 6380 dbSNP
rs940485277 6380 dbSNP
rs556160282 6385 dbSNP
rs995722857 6389 dbSNP
rs764663905 6398 dbSNP
rs1399519986 6401 dbSNP
rs964471067 6406 dbSNP
rs1018319070 6420 dbSNP
rs1008735078 6422 dbSNP
rs1312393288 6424 dbSNP
rs1371625730 6427 dbSNP
rs1178312985 6429 dbSNP
rs909042828 6430 dbSNP
rs544239033 6442 dbSNP
rs1480834045 6455 dbSNP
rs573545700 6456 dbSNP
rs891096742 6459 dbSNP
rs554899228 6462 dbSNP
rs1263519572 6465 dbSNP
rs1462434342 6466 dbSNP
rs1201548651 6467 dbSNP
rs953304411 6468 dbSNP
rs1029302416 6469 dbSNP
rs976032445 6473 dbSNP
rs1365667298 6481 dbSNP
rs1469049337 6483 dbSNP
rs761471082 6484 dbSNP
rs965718710 6490 dbSNP
rs35604846 6493 dbSNP
rs776281019 6496 dbSNP
rs1195952720 6497 dbSNP
rs1335182943 6500 dbSNP
rs533664975 6501 dbSNP
rs1401010387 6502 dbSNP
rs1391661894 6505 dbSNP
rs1308497931 6506 dbSNP
rs1480103376 6510 dbSNP
rs1333544419 6511 dbSNP
rs1227249639 6528 dbSNP
rs1283783610 6530 dbSNP
rs1201495166 6538 dbSNP
rs1325613742 6538 dbSNP
rs1262329980 6549 dbSNP
rs1483041865 6553 dbSNP
rs1196670642 6563 dbSNP
rs1252933859 6569 dbSNP
rs1019664515 6574 dbSNP
rs1181585356 6580 dbSNP
rs1430564047 6582 dbSNP
rs998931193 6587 dbSNP
rs566198394 6590 dbSNP
rs1021781608 6598 dbSNP
rs1012132825 6606 dbSNP
rs1283155816 6609 dbSNP
rs1299456546 6617 dbSNP
rs1222242127 6619 dbSNP
rs767716893 6620 dbSNP
rs1352648223 6625 dbSNP
rs1408635330 6627 dbSNP
rs1303262923 6632 dbSNP
rs1308159197 6636 dbSNP
rs1391240855 6637 dbSNP
rs1221674455 6641 dbSNP
rs1480910051 6645 dbSNP
rs746640595 6646 dbSNP
rs1044786619 6647 dbSNP
rs949129983 6648 dbSNP
rs917570078 6649 dbSNP
rs529381521 6655 dbSNP
rs982472208 6666 dbSNP
rs1490978936 6680 dbSNP
rs894654393 6682 dbSNP
rs374154161 6683 dbSNP
rs938951292 6684 dbSNP
rs553982268 6697 dbSNP
rs759967556 6712 dbSNP
rs1479418410 6716 dbSNP
rs775171787 6719 dbSNP
rs1173016334 6720 dbSNP
rs1365530860 6728 dbSNP
rs190852402 6729 dbSNP
rs1036022189 6732 dbSNP
rs940431533 6734 dbSNP
rs1366971813 6735 dbSNP
rs908991792 6743 dbSNP
rs185934129 6744 dbSNP
rs1362603194 6752 dbSNP
rs1247939713 6754 dbSNP
rs931779076 6759 dbSNP
rs1383666656 6767 dbSNP
rs769404690 6773 dbSNP
rs921790383 6780 dbSNP
rs1228014029 6797 dbSNP
rs976402685 6800 dbSNP
rs550198457 6804 dbSNP
rs966022287 6806 dbSNP
rs1010229335 6815 dbSNP
rs892380745 6820 dbSNP
rs1265321352 6827 dbSNP
rs531993217 6829 dbSNP
rs1353458478 6831 dbSNP
rs1188622123 6854 dbSNP
rs1001199521 6860 dbSNP
rs904997982 6862 dbSNP
rs1261878870 6868 dbSNP
rs977441953 6870 dbSNP
rs1045323797 6875 dbSNP
rs967388829 6887 dbSNP
rs778853801 6891 dbSNP
rs1021686595 6892 dbSNP
rs1455330452 6913 dbSNP
rs1315050024 6920 dbSNP
rs1286883051 6925 dbSNP
rs1011667232 6932 dbSNP
rs1453104037 6936 dbSNP
rs959090124 6937 dbSNP
rs1453673671 6962 dbSNP
rs1226636450 6964 dbSNP
rs1382040378 6990 dbSNP
rs1034565270 6991 dbSNP
rs1046762032 6996 dbSNP
rs138459636 7005 dbSNP
rs549368839 7012 dbSNP
rs1244560616 7022 dbSNP
rs907494312 7026 dbSNP
rs1361868538 7027 dbSNP
rs1180754103 7031 dbSNP
rs1408157563 7052 dbSNP
rs777807376 7053 dbSNP
rs1156753819 7054 dbSNP
rs1184985883 7060 dbSNP
rs1470077779 7060 dbSNP
rs986960139 7063 dbSNP
rs1035969614 7066 dbSNP
rs1446152504 7079 dbSNP
rs1004482651 7090 dbSNP
rs1302320874 7096 dbSNP
rs1020366867 7109 dbSNP
rs1225554038 7120 dbSNP
rs1286948733 7126 dbSNP
rs1329116017 7134 dbSNP
rs988858295 7135 dbSNP
rs957361293 7139 dbSNP
rs1440326893 7144 dbSNP
rs1209065782 7146 dbSNP
rs887458699 7151 dbSNP
rs1233099800 7152 dbSNP
rs1049247593 7155 dbSNP
rs931789884 7157 dbSNP
rs183906961 7159 dbSNP
rs1040235785 7160 dbSNP
rs560552987 7161 dbSNP
rs61744726 7162 dbSNP
rs978013957 7164 dbSNP
rs1013464081 7165 dbSNP
rs879385669 7174 dbSNP
rs1444420005 7185 dbSNP
rs1306305954 7187 dbSNP
rs914583145 7189 dbSNP
rs990639749 7191 dbSNP
rs958854208 7204 dbSNP
rs1358979526 7209 dbSNP
rs1343227950 7212 dbSNP
rs1313252127 7221 dbSNP
rs1432935998 7232 dbSNP
rs1034920444 7258 dbSNP
rs1003066989 7270 dbSNP
rs1202370040 7273 dbSNP
rs929723239 7276 dbSNP
rs941282629 7277 dbSNP
rs1201589740 7294 dbSNP
rs756348094 7296 dbSNP
rs532976878 7314 dbSNP
rs1382790278 7315 dbSNP
rs1431918666 7335 dbSNP
rs1005099949 7344 dbSNP
rs1166786099 7347 dbSNP
rs1370111332 7353 dbSNP
rs1425381406 7363 dbSNP
rs887440943 7376 dbSNP
rs911499160 7377 dbSNP
rs1271177600 7382 dbSNP
rs181552870 7398 dbSNP
rs1384190883 7399 dbSNP
rs79951252 7402 dbSNP
rs752874672 7404 dbSNP
rs1363606679 7407 dbSNP
rs986929948 7410 dbSNP
rs934121758 7412 dbSNP
rs913410812 7424 dbSNP
rs1224101674 7426 dbSNP
rs1242207506 7434 dbSNP
rs900272501 7436 dbSNP
rs1193607805 7445 dbSNP
rs767773895 7449 dbSNP
rs1451558910 7451 dbSNP
rs925962427 7463 dbSNP
rs980543540 7464 dbSNP
rs1425321141 7489 dbSNP
rs969328959 7491 dbSNP
rs1405341907 7503 dbSNP
rs1490299612 7512 dbSNP
rs1023517737 7520 dbSNP
rs1347384396 7526 dbSNP
rs1433355785 7531 dbSNP
rs34873352 7536 dbSNP
rs1013514645 7541 dbSNP
rs1383113550 7550 dbSNP
rs1247498369 7551 dbSNP
rs1216569598 7556 dbSNP
rs944492632 7558 dbSNP
rs755309042 7559 dbSNP
rs1281974371 7563 dbSNP
rs1340083315 7567 dbSNP
rs960498105 7577 dbSNP
rs1291791345 7585 dbSNP
rs751860124 7590 dbSNP
rs1463329835 7607 dbSNP
rs1207897456 7634 dbSNP
rs1247596446 7638 dbSNP
rs1042287825 7655 dbSNP
rs1338312118 7658 dbSNP
rs1366851085 7667 dbSNP
rs946657543 7673 dbSNP
rs143781570 7678 dbSNP
rs990197214 7680 dbSNP
rs533647817 7684 dbSNP
rs937405117 7690 dbSNP
rs927378854 7693 dbSNP
rs889464889 7694 dbSNP
rs1339308092 7700 dbSNP
rs1239160761 7704 dbSNP
rs1051253336 7718 dbSNP
rs1327033318 7729 dbSNP
rs1227519936 7738 dbSNP
rs766980594 7739 dbSNP
rs934257671 7740 dbSNP
rs190888830 7741 dbSNP
rs971504691 7745 dbSNP
rs148998770 7752 dbSNP
rs983660170 7753 dbSNP
rs952358062 7769 dbSNP
rs1027715065 7772 dbSNP
rs1414794864 7776 dbSNP
rs1471925869 7779 dbSNP
rs995830907 7782 dbSNP
rs1474168920 7785 dbSNP
rs936090774 7786 dbSNP
rs1432040265 7787 dbSNP
rs1401077185 7801 dbSNP
rs900178062 7804 dbSNP
rs1200818105 7807 dbSNP
rs186016093 7812 dbSNP
rs1411914219 7815 dbSNP
rs1267226424 7827 dbSNP
rs980213451 7832 dbSNP
rs539829597 7845 dbSNP
rs970429120 7850 dbSNP
rs917264849 7857 dbSNP
rs572633775 7858 dbSNP
rs557428781 7859 dbSNP
rs150181732 7863 dbSNP
rs1438601611 7866 dbSNP
rs1254146787 7875 dbSNP
rs960635744 7876 dbSNP
rs1272632129 7885 dbSNP
rs1270255868 7892 dbSNP
rs541762307 7893 dbSNP
rs776334016 7910 dbSNP
rs1042281452 7912 dbSNP
rs74744852 7914 dbSNP
rs1025471277 7919 dbSNP
rs946605055 7922 dbSNP
rs1169920794 7929 dbSNP
rs893749262 7934 dbSNP
rs1224064568 7938 dbSNP
rs1428545415 7940 dbSNP
rs1344563939 7947 dbSNP
rs1303629400 7948 dbSNP
rs1272853410 7963 dbSNP
rs1384832930 7981 dbSNP
rs962491783 7982 dbSNP
rs1330726718 7985 dbSNP
rs1229496729 7994 dbSNP
rs763650664 7996 dbSNP
rs1017058984 7997 dbSNP
rs1055470553 8010 dbSNP
rs937330987 8020 dbSNP
rs760437888 8023 dbSNP
rs1189823002 8042 dbSNP
rs1267178619 8048 dbSNP
rs1006649264 8056 dbSNP
rs1190033484 8058 dbSNP
rs1387952921 8060 dbSNP
rs981452546 8063 dbSNP
rs1163710727 8065 dbSNP
rs950170475 8069 dbSNP
rs1456380951 8072 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 22806.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714646. RNA binding protein: AGO2. Condition:mildMNase ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ggacaggUAG-GCG-GAC-ACGGGUCu 5'
                 ||| | | ||| ||||||| 
Target 5' --acaggAUCUCACUCUGUUGCCCAGg 3'
 		1 - 25
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ggacagguaggcggacACGGGUCu 5'
                          ||||||| 
Target 5' ---------------uUGCCCAGg 3'
 		1 - 9
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Cardiac Tissues
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM2202476. RNA binding protein: AGO2. Condition:S1_LV_54yo_Male_AGO2_bound_RNA ...

- Spengler RM; Zhang X; Cheng C; McLendon JM; et al., 2016, Nucleic acids research.

Article - Spengler RM; Zhang X; Cheng C; McLendon JM; et al.
- Nucleic acids research, 2016
MicroRNAs (miRs) have emerged as key biological effectors in human health and disease. These small noncoding RNAs are incorporated into Argonaute (Ago) proteins, where they direct post-transcriptional gene silencing via base-pairing with target transcripts. Although miRs have become intriguing biological entities and attractive therapeutic targets, the translational impacts of miR research remain limited by a paucity of empirical miR targeting data, particularly in human primary tissues. Here, to improve our understanding of the diverse roles miRs play in cardiovascular function and disease, we applied high-throughput methods to globally profile miR:target interactions in human heart tissues. We deciphered Ago2:RNA interactions using crosslinking immunoprecipitation coupled with high-throughput sequencing (HITS-CLIP) to generate the first transcriptome-wide map of miR targeting events in human myocardium, detecting 4000 cardiac Ago2 binding sites across >2200 target transcripts. Our initial exploration of this interactome revealed an abundance of miR target sites in gene coding regions, including several sites pointing to new miR-29 functions in regulating cardiomyocyte calcium, growth and metabolism. Also, we uncovered several clinically-relevant interactions involving common genetic variants that alter miR targeting events in cardiomyopathy-associated genes. Overall, these data provide a critical resource for bolstering translational miR research in heart, and likely beyond.
LinkOut: [PMID: 27418678]
CLIP-seq Support 1 for dataset GSM714646
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / mildMNase, repA
Location of target site ENST00000346872.3 | 3UTR | ACAGGAUCUCACUCUGUUGCCCAGGCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000346872.3 | 3UTR | UUGCCCAGGCUGGUCCUGAACUCCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
177 hsa-miR-5189-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT142280 DCTN5 dynactin subunit 5 2 4
MIRT455613 SRSF3 serine and arginine rich splicing factor 3 2 2
MIRT458687 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT470847 PLXND1 plexin D1 2 2
MIRT471838 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT475228 IKZF3 IKAROS family zinc finger 3 2 4
MIRT480294 C7orf73 short transmembrane mitochondrial protein 1 2 4
MIRT483509 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT484952 ZBTB34 zinc finger and BTB domain containing 34 2 6
MIRT489295 B4GALNT4 beta-1,4-N-acetyl-galactosaminyltransferase 4 2 4
MIRT490801 PSMD3 proteasome 26S subunit, non-ATPase 3 2 2
MIRT493375 KIAA1614 KIAA1614 2 2
MIRT496408 PARVB parvin beta 2 2
MIRT497267 GRK6 G protein-coupled receptor kinase 6 2 2
MIRT497679 SYNGR1 synaptogyrin 1 2 2
MIRT498222 TLN2 talin 2 2 2
MIRT498313 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT504049 TOMM5 translocase of outer mitochondrial membrane 5 2 2
MIRT516313 F8A2 coagulation factor VIII associated 2 2 2
MIRT516339 F8A3 coagulation factor VIII associated 3 2 2
MIRT517813 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT518743 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519295 MLH1 mutL homolog 1 2 2
MIRT520387 UBB ubiquitin B 2 4
MIRT525228 DPY19L3 dpy-19 like C-mannosyltransferase 3 2 2
MIRT533147 WNT10A Wnt family member 10A 2 2
MIRT533544 TPR translocated promoter region, nuclear basket protein 2 2
MIRT533684 TMEM86A transmembrane protein 86A 2 2
MIRT534544 RUNX1 runt related transcription factor 1 2 2
MIRT539592 SSH2 slingshot protein phosphatase 2 2 2
MIRT539676 ZBTB44 zinc finger and BTB domain containing 44 2 2
MIRT539710 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539730 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT539755 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT539787 EMC1 ER membrane protein complex subunit 1 2 4
MIRT539812 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT539995 SLC24A4 solute carrier family 24 member 4 2 2
MIRT540073 SSH3 slingshot protein phosphatase 3 2 2
MIRT540092 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540428 FAM83F family with sequence similarity 83 member F 2 2
MIRT540512 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540531 ZNF417 zinc finger protein 417 2 2
MIRT540622 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT540909 PON1 paraoxonase 1 2 2
MIRT540990 ZNF460 zinc finger protein 460 2 4
MIRT541513 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT541633 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT541665 ATP8B3 ATPase phospholipid transporting 8B3 2 2
MIRT541738 ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 2 2
MIRT541813 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541904 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542004 XRCC2 X-ray repair cross complementing 2 2 2
MIRT542020 PEX2 peroxisomal biogenesis factor 2 2 2
MIRT542187 FUT1 fucosyltransferase 1 (H blood group) 2 6
MIRT542204 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542337 LIMD1 LIM domains containing 1 2 2
MIRT542426 ZNF331 zinc finger protein 331 2 2
MIRT542459 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542494 WDR13 WD repeat domain 13 2 2
MIRT542552 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542699 RPS15A ribosomal protein S15a 2 2
MIRT542819 PDE12 phosphodiesterase 12 2 2
MIRT552108 PPP1R1A protein phosphatase 1 regulatory inhibitor subunit 1A 2 2
MIRT555606 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 2
MIRT564916 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 2
MIRT568609 ACVR2A activin A receptor type 2A 2 2
MIRT608702 GMPR guanosine monophosphate reductase 2 2
MIRT610061 MYBPC1 myosin binding protein C, slow type 2 2
MIRT610794 KLK2 kallikrein related peptidase 2 2 2
MIRT617179 GOSR2 golgi SNAP receptor complex member 2 2 2
MIRT620581 WBSCR27 methyltransferase like 27 2 4
MIRT623348 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT623873 FUS FUS RNA binding protein 2 2
MIRT625418 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT630227 SORD sorbitol dehydrogenase 2 2
MIRT631870 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT631905 VEGFC vascular endothelial growth factor C 2 2
MIRT632005 POPDC2 popeye domain containing 2 2 2
MIRT632876 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT633313 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633989 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635248 ELOVL6 ELOVL fatty acid elongase 6 2 2
MIRT635258 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635280 GK5 glycerol kinase 5 (putative) 2 2
MIRT635862 SLC11A2 solute carrier family 11 member 2 2 2
MIRT636624 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT637085 SELPLG selectin P ligand 2 2
MIRT639025 AAK1 AP2 associated kinase 1 2 2
MIRT640876 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT641928 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642173 HEBP2 heme binding protein 2 2 2
MIRT642251 PAK4 p21 (RAC1) activated kinase 4 2 2
MIRT642854 RNF135 ring finger protein 135 2 2
MIRT643240 PRSS21 protease, serine 21 2 2
MIRT643375 TRIM16L tripartite motif containing 16 like 2 2
MIRT646931 MCCC2 methylcrotonoyl-CoA carboxylase 2 2 2
MIRT647803 FRMD8 FERM domain containing 8 2 2
MIRT650517 UFM1 ubiquitin fold modifier 1 2 2
MIRT651618 WASF3 WAS protein family member 3 2 2
MIRT655588 OTUD7B OTU deubiquitinase 7B 2 2
MIRT657652 GPR75 G protein-coupled receptor 75 2 2
MIRT657835 GJD3 gap junction protein delta 3 2 2
MIRT658357 FAM65B RHO family interacting cell polarization regulator 2 2 2
MIRT661173 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT661332 TBC1D15 TBC1 domain family member 15 2 2
MIRT662003 ZNF445 zinc finger protein 445 2 2
MIRT662194 MEI1 meiotic double-stranded break formation protein 1 2 2
MIRT663473 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT663958 ZNF554 zinc finger protein 554 2 2
MIRT665907 TBCCD1 TBCC domain containing 1 2 2
MIRT666029 STRN3 striatin 3 2 2
MIRT666496 SBNO1 strawberry notch homolog 1 2 2
MIRT667290 MYPN myopalladin 2 4
MIRT668020 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT670087 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670598 LLGL1 LLGL1, scribble cell polarity complex component 2 4
MIRT670689 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT670848 SFT2D2 SFT2 domain containing 2 2 2
MIRT670981 MED17 mediator complex subunit 17 2 2
MIRT672621 IGF2R insulin like growth factor 2 receptor 2 2
MIRT673223 KLHDC8A kelch domain containing 8A 2 2
MIRT674265 ZNF284 zinc finger protein 284 2 2
MIRT675631 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT675806 MED28 mediator complex subunit 28 2 2
MIRT676337 PCCB propionyl-CoA carboxylase beta subunit 2 2
MIRT681724 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT682844 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682913 FAM73A mitoguardin 1 2 2
MIRT682932 ZNF292 zinc finger protein 292 2 2
MIRT682950 RPL12 ribosomal protein L12 2 2
MIRT683030 SUSD5 sushi domain containing 5 2 2
MIRT684387 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT684687 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT687202 PLXNA3 plexin A3 2 2
MIRT689145 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689632 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT690598 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690802 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690943 GLG1 golgi glycoprotein 1 2 2
MIRT691850 OSCAR osteoclast associated, immunoglobulin-like receptor 2 2
MIRT693615 CENPL centromere protein L 2 2
MIRT693757 ZNF383 zinc finger protein 383 2 2
MIRT694014 PPIL4 peptidylprolyl isomerase like 4